mRNA_S-firma_F_contig10708.961.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 351 bits (900), Expect = 1.200e-120 Identity = 180/228 (78.95%), Postives = 197/228 (86.40%), Query Frame = 1
Query: 1 MKTSFCAAAGLVAATG----TAQASTPTLTAQQQITMFNPEDFAFSLGGPEPEAPVNGFQIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATEMLYVIEG-HMRSAFVEENGGEGAVVNDLYQGDVMFFPQGLIHYQQNLGCEPATFLAALNNEDPGAVTITTRFFELPSEAIEAALDFEDPALQALIESLPEAPVAARRQCLKMCGLDNGDDKLSYDYDY 669
MKTSFC+AAGLV A G TAQAS +TAQQQITMFNPEDF F+LGGPEP+APV+GFQIR L +PAL+GQGI+MALVNLDACTINLPHIHPRATEM YVI G H+R AFVEENGGEGAVVNDL QGDV FFPQGLIHY+QNLGCEP TFLAALNN+DPGAVTITTRFFELPSEAI+A+L+FEDPALQ LIESLP+AP AARRQCL+ CGL +G D SY Y Y
Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQAS-GVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSYSYGY 227
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 320 bits (820), Expect = 2.300e-108 Identity = 164/229 (71.62%), Postives = 187/229 (81.66%), Query Frame = 1
Query: 1 MKTSFCAAAGLVAATGTAQASTP--TLTAQQQITMFNPEDFAFSLGGPEPEAPVNGFQIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATEMLYVIEGH-MRSAFVEENGGEGAVVNDLYQGDVMFFPQGLIHYQQNLGCEPATFLAALNNEDPGAVTITTRFFELPSEAIEAALDFEDPALQALIESLPEAPVAARRQCLKMCGLDNGDDKLSYDYDYEND 678
MKTSFCAAAG V A G A +T QQQIT++NPEDF FSLGGPEP+A V+GFQ+R +N LPAL+GQGISM LVNLD C INLPHIHPRATEM+YVI+G +R AFVEENGGEGAVVNDL QGDV FFPQGLIHYQQNL CEPATFLAALNNEDPGA+TITTRFFELP EAI+A+++FE+P LQ LIESLP+AP AAR+QCL+ C + + SYDY Y+ D
Sbjct: 1 MKTSFCAAAGFVIAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAEPGNHFSYDYTYDVD 229
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 173 bits (439), Expect = 2.070e-50 Identity = 89/184 (48.37%), Postives = 119/184 (64.67%), Query Frame = 1
Query: 85 QQITMFNPEDFAFSL-GGPEPEAPVNGFQIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATEMLYVIEGHMRSAFVEENGGEGAVVNDLYQGDVMFFPQGLIHYQQNLGCEPATFLAALNNEDPGAVTITTRFFELPSEAIEAALDFE-DPALQALIESLPEAPVAARRQCLKMCGL 630
Q++ FN EDF L P+ G + +NL ++PAL QG++M L+NL+ C NLPH+HPRA+E +YVI+G+++ F+EENG + +VNDL QG F PQG IHYQ NLGCE A +AA NNEDPG +TI +FF+LP AI A+L DP ++AL SLP P +CL+ CG
Sbjct: 40 QRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGNVQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 152 bits (383), Expect = 3.310e-41 Identity = 78/177 (44.07%), Postives = 104/177 (58.76%), Query Frame = 1
Query: 112 DFAFSLGGPEPEAPVNGF--QIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATEMLYVIEGHMRSAFVEENGGEGAVVNDLYQGDVMFFPQGLIHYQQNLGCEPATFLAALNNEDPGAVTITTRFFELPSEAIEAALDFEDPALQALIESLPEAPVAA--RRQCLKMCGL 630
DF F EA NG + G +++ PAL G G+S LV+L C+IN PH+HPRATE++Y+I+G + F EENGG V ND+ +GD FFP LIH+Q N CEPA F+A LN++D G TI FF LP + + AL ++ + L E LP P R +C + CGL
Sbjct: 144 DFIFDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGRVSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA) HSP 1 Score: 146 bits (368), Expect = 3.070e-39 Identity = 72/177 (40.68%), Postives = 99/177 (55.93%), Query Frame = 1
Query: 100 FNPEDFAFSLGGPEPEAPVNGFQIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATEMLYVIEGHMRSAFVEENGGEGAVVNDLYQGDVMFFPQGLIHYQQNLGCEPATFLAALNNEDPGAVTITTRFFELPSEAIEAALDFEDPALQALIESLPEAPVAARRQCLKMCGL 630
F+ EDF E+ G + N NN+P ++ ++ + C INLPH+HPR TE +Y+IEG + FV E G ++ND+ FFPQGL+HYQQN+ CEPA F++ LN+ DPG + I ELPSEA+EA D + + L LP P R +CL+ CGL
Sbjct: 119 FDAEDFVIDFATQPLESTGLGGTSQPANRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYIIEGALTVGFVTEGGR--LILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPAALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA) HSP 1 Score: 143 bits (360), Expect = 4.760e-39 Identity = 72/181 (39.78%), Postives = 101/181 (55.80%), Query Frame = 1
Query: 100 FNPEDFAFSLG----GPEPEAPVNGFQIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATEMLYVIEGHMRSAFVEENGGEGAVVNDLYQGDVMFFPQGLIHYQQNLGCEPATFLAALNNEDPGAVTITTRFFELPSEAIEAALDFEDPALQALIESLPEAPVAARRQCLKMCGL 630
F+ EDF F G ++ NG + N+N P ++ ++ + C INLPH+HPR TE Y+IEG + FV E+G V+ND+ FFPQGL+HYQQN+GCEPA F++ L++ DPG + I LP EAI AA D ++ + + LP+ P R +CL CGL
Sbjct: 22 FDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGELTVGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA) HSP 1 Score: 142 bits (359), Expect = 5.770e-38 Identity = 77/182 (42.31%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 100 FNPEDFAFSLGGPEPEAPVN---GFQIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATEMLYVIEGHMRSAFVEENGGEGAVVNDLYQGDVMFFPQGLIHYQQNLGCEPATFLAALNNEDPGAVTITTRFFELPSEAIEAALDFEDPALQALIE-SLPEAPVAARRQCLKMCGLD 633
F+ EDF F + G I+ VNL P ++ G+S + ++ C INLPH+HPRATE LY+IEG + FV + ++NDL + V FFP+G +HYQQN+ CE A F++ L+NEDPG + +++ LP EA+ A + ED AL A + LPE P AR +CL CGLD
Sbjct: 105 FDNEDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEGQVTLGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFN-EDQALIAQLRLGLPEGPARARSECLARCGLD 283
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: D7FIJ3_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI) HSP 1 Score: 136 bits (343), Expect = 9.010e-38 Identity = 76/100 (76.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query: 1 MKTSFCAAAGLVAATG----TAQASTPTLTAQQQITMFNPEDFAFSLGGPEPEAPVNGFQIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATE 288
MKT FCAAAG V A G T QAS +TAQQQIT+FNPEDF FSLGGPEP+A V+GFQIR VN+N LPAL+GQGISMALVNLD C INLPHIHPRATE
Sbjct: 1 MKT-FCAAAGFVIAAGLMSSTVQAS-GVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: D7FI68_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI) HSP 1 Score: 137 bits (344), Expect = 1.540e-37 Identity = 76/101 (75.25%), Postives = 83/101 (82.18%), Query Frame = 1
Query: 1 MKTSFCAAAGLVAATG----TAQASTPTLTAQQQITMFNPEDFAFSLGGPEPEAPVNGFQIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATEM 291
MKT FCAAAG V A G T QAS +TAQQQIT+FNPEDF FSLGGPEP+A V+GFQIR VN+N LPAL+GQGISMALVNLD C INLPHIHPRATE+
Sbjct: 1 MKT-FCAAAGFVIAAGLMPSTVQAS-GVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEV 99
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Match: A0A0G4EG82_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG82_VITBC) HSP 1 Score: 139 bits (349), Expect = 6.130e-37 Identity = 73/179 (40.78%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 100 FNPEDFAFSLGGPEPEAPVNGFQIRGVNLNNLPALEGQGISMALVNLDACTINLPHIHPRATEMLYVIEGHMRSAFVEENGGEGAVVNDLYQGDVMFFPQGLIHYQQNLGCEPATFLAALNNEDPGAVTITTRFFELPSEAIEAALDFEDPALQALIESLPEAPVAA--RRQCLKMCGL 630
F DF F + G IRG PAL G G S + ++ C+IN PH+HPRATEMLY+ +G + F EENGG V ND+ +G+ FFP LIH+Q N CEPA F+ LN++D G TI F LP++ + AL+ ++ + L + LP P R QC + CGL
Sbjct: 69 FGNSDFTFDFNEAQVLTNGEGGGIRGATPVQWPALSGHGFSQTVTDIAPCSINTPHLHPRATEMLYITKGRLIVGFAEENGGR-IVTNDIKEGNSAFFPHTLIHWQFNPTCEPAQFVGTLNSDDGGVHTIAQALFGLPNDVLATALNVDEYDVTLLHDELPNVPALGLKRDQCRRKCGL 246 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10708.961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10708.961.1 >prot_S-firma_F_contig10708.961.1 ID=prot_S-firma_F_contig10708.961.1|Name=mRNA_S-firma_F_contig10708.961.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=230bp MKTSFCAAAGLVAATGTAQASTPTLTAQQQITMFNPEDFAFSLGGPEPEAback to top mRNA from alignment at S-firma_F_contig10708:999..3004- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10708.961.1 ID=mRNA_S-firma_F_contig10708.961.1|Name=mRNA_S-firma_F_contig10708.961.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2006bp|location=Sequence derived from alignment at S-firma_F_contig10708:999..3004- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10708:999..3004- >mRNA_S-firma_F_contig10708.961.1 ID=mRNA_S-firma_F_contig10708.961.1|Name=mRNA_S-firma_F_contig10708.961.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1380bp|location=Sequence derived from alignment at S-firma_F_contig10708:999..3004- (Sphaerotrichia firma ET2_F female)back to top |