mRNA_S-firma_F_contig10707.960.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: A0A1C9C589_HAV01 (Putative glycerophosphodiester phosphodiesterase n=1 Tax=Heterosigma akashiwo virus 01 TaxID=97195 RepID=A0A1C9C589_HAV01) HSP 1 Score: 166 bits (420), Expect = 5.100e-48 Identity = 87/216 (40.28%), Postives = 131/216 (60.65%), Query Frame = 1
Query: 13 IIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHNAVDKKTGVAIHCRNYSE-ADLSLAEVFEQFSSDTFVYLLDIKDPRACSEICRCIYELCLQFSCLERCVLGSFNEFHLRDLCNIEKTTGCTLKKAYITSNIHEDMFASRIGAFGLTCIVLYKYQVNREVVSFCHSKGVKVYVYTCNTDGLERYAKSLGCDGVVTDTPNQF 657
+IAHRG SK + +NT+ ++ A + IE+DVCITKDNV ++ HN KK V + +Y+E DLSL++VF ++ Y +DIKD R S I + + L+ C+L SF+E HL D+ +E+ + KAYIT N DMF+ ++ + L+ ++LYK+Q+N+E V + H K VKV YTCNT GL Y +++ DG+++D P F
Sbjct: 3 LIAHRGCSKVYPENTIEAFKHAIKQGITCIELDVCITKDNVIIIDHNTFSKKNSVHHYDISYNENKDLSLSKVFRSLPNN-ITYFIDIKDNRLESNIVKHVVITMLEHDA--NCILSSFSEKHLDDMLIMEQDFNINISKAYITGNYDLDMFSFKMNRYNLSYLILYKFQINKETVDYTHVKNVKVIAYTCNTQGLYDYMENMNIDGIMSDNPEIF 215
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: A0A417Y9R1_9BACI (Glycerophosphodiester phosphodiesterase n=1 Tax=Oceanobacillus profundus TaxID=372463 RepID=A0A417Y9R1_9BACI) HSP 1 Score: 87.4 bits (215), Expect = 2.580e-17 Identity = 68/236 (28.81%), Postives = 117/236 (49.58%), Query Frame = 1
Query: 13 IIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHNAVDKKTGVAI-HCRNYSEADLS------------------LAEVFEQFSSDTFVYL-LDIKDPRACSEICR-CIYELCLQFSCLERCVLGSFNEFHLRDLCNIEKTTGCTLKKAYITSNIHEDMFASRIGAFGLTCIVLYKYQV-NREVVSFCHSKGVKVYVYTCNTDGLERYAKSLGCDGVVTDTPNQ 654
IIAHRG SK +NTM ++ A + +AIE DV +TKDN+PV+ H+ K+T + + ++Y A+L E F Q+ SDT ++L L++K+ + ++EL Q++ ++R + +FN ++ + T L + +N+ +A +GA + KY++ N+ ++ C + ++V VYT N LGCDG+ TD PN+
Sbjct: 4 IIAHRGASKLAPENTMPAFELALRMKAEAIETDVQLTKDNIPVLIHDEQVKRTTNSYGYIKDYHLAELKQLDAGSWFSKKFAGATILTLEEFLQWMSDTPLHLHLELKNNKIDYMYLEPIVFELLNQYNVVDRTTISTFNPKSVQRFSQLSSTIEIGLLTSRKINNLAR--YAKELGAKAIHV----KYRLLNKALIQKCQQEDMRVRVYTVNHFSPMMRCFRLGCDGIFTDVPNK 233
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: UPI0011F12DC9 (glycerophosphodiester phosphodiesterase n=1 Tax=Oceanobacillus polygoni TaxID=1235259 RepID=UPI0011F12DC9) HSP 1 Score: 85.5 bits (210), Expect = 1.360e-16 Identity = 69/241 (28.63%), Postives = 123/241 (51.04%), Query Frame = 1
Query: 13 IIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHNAVDKKTGVAI-HCRNYSEADLSLAEVFEQFSS------------------DTFVYL-LDIKDPRACSEICR-CIYELCLQFSCLERCVLGSFNEFHLR---DLCNIEKTTGCTLKKAYITSNIHEDM--FASRIGAFGLTCIVLYKYQV-NREVVSFCHSKGVKVYVYTCNTDGLERYAKSLGCDGVVTDTPNQ 654
IIAHRG SK +NTM ++ A + +AIE DV +TKDN+PV+ H+ K+T ++ + ++Y A+L + FS+ DT ++L L++K+ + +YEL Q++ ++R + +FN ++ LC+ +++ A +TS +++ +A +GA + KY++ N+ ++ C + ++V VYT N LGCDG+ TD PN+
Sbjct: 4 IIAHRGASKLAPENTMPAFELALRMKAEAIETDVQLTKDNIPVLIHDEHVKRTTNSLGYIKDYYLAELKQLDAGSWFSNEFSGTKILTLEEFLRWMIDTPLHLHLELKNNKIDYMYLEPIVYELLKQYNVVDRTTISTFNSNSVQRFSQLCS-------SIEIALLTSRKIKNLPSYAKELGAKAIHI----KYRLLNKTLIQKCQQENMRVRVYTVNHFSPMMRCFQLGCDGIFTDVPNK 233
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: UPI000C07F658 (glycerophosphodiester phosphodiesterase n=1 Tax=Virgibacillus ndiopensis TaxID=2004408 RepID=UPI000C07F658) HSP 1 Score: 82.4 bits (202), Expect = 2.110e-15 Identity = 65/237 (27.43%), Postives = 113/237 (47.68%), Query Frame = 1
Query: 13 IIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHNAVDKKTGVAI-------------------HCRNYSEADLSLAEVFEQFSSDTFVYL-LDIKDPRA-CSEICRCIYELCLQFSCLERCVLGSFNEFHLRDLCNIEKTTGCTLKKAYITSNIHEDM--FASRIGAFGLTCIVLYKYQV-NREVVSFCHSKGVKVYVYTCNTDGLERYAKSLGCDGVVTDTPN 651
IIAHRG SK +NTM +++ A +AIE DV +TKDNVPV+ H+ K+T I + Y+ + E F ++ +YL +++K+ + I +Y++ + L R L +FN ++ + + +K A++TS ++++ +A +GA + KY++ NR +V CH + + YT N + +L CDG+ TD P+
Sbjct: 5 IIAHRGASKLAPENTMPAFNLAYQQGAEAIETDVQLTKDNVPVLIHDEHVKRTTNGIGYIKDLTFAQLKQLDAGAWFSQKYTGTAIISLEKFLEWIKPKPLYLNIELKNNKIDYKNIETIVYDMVRHYQLLNRTTLSTFNPKSVKRISELHSE----IKIAFLTSRRNKNLVPYARELGANAIHV----KYRLLNRFLVDQCHQANMAIRAYTLNKPSRMLKSYALNCDGIFTDVPD 233
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: UPI0009A6065A (glycerophosphodiester phosphodiesterase n=2 Tax=Halobacillus TaxID=45667 RepID=UPI0009A6065A) HSP 1 Score: 78.2 bits (191), Expect = 7.770e-14 Identity = 69/239 (28.87%), Postives = 108/239 (45.19%), Query Frame = 1
Query: 13 IIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHNA-VDKKTGVAIHCRNYSEADLSLAEVFEQFSS---DTFVYLLDI-----------------KDPRACSEICRCIYELCLQFSCLERCVLGSFNEFHLRDLCNIEKTTGC--TLKKAYITSNI--HEDMFASRIGAFGLTCIVLYKYQVNREVVSFCHSKGVKVYVYTCNTDGLERYAKSLGCDGVVTDTPNQ 654
I AHRG SK +NTM +Y A D +E+DV +TKDN+PV+ H+ V + T ++Y+ ++ + FSS D + LD + +I + +Y+ LE V+ SFN L ++EK T ++ A++TS H FA GA L V Y+ +++ +V CH + + VYT N LGC+G+ TD P++
Sbjct: 6 IYAHRGASKLAPENTMPAYEIASESGADGLEIDVQLTKDNIPVLIHDENVRRTTNGTGFVQDYTYDEIKRLDAGSWFSSKFSDCSIVTLDYFLRWFKNQSMKLNVELKTNVIEYKDIEQMVYDRLSFHRMLEHTVISSFN------LSSVEKVTAIDPNVQTAFLTSTKRRHLPKFAHTHGASSLH--VKYR-MLDKNLVKQCHHHRMPLRVYTVNRPSWMTKCFKLGCEGIFTDVPHE 235
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: UPI000D0BC4B9 (glycerophosphodiester phosphodiesterase n=1 Tax=Lentibacillus sp. Marseille-P4043 TaxID=2040293 RepID=UPI000D0BC4B9) HSP 1 Score: 78.2 bits (191), Expect = 7.890e-14 Identity = 66/235 (28.09%), Postives = 110/235 (46.81%), Query Frame = 1
Query: 13 IIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHNA-VDKKTGVAIHCRN------------------YSEADLSLAEVFEQFSSDTFVYL-LDIKDPRA-CSEICRCIYELCLQFSCLERCVLGSFNEFHLRDLCNIEKTTGCTLKKAYITSNIHEDMFASRIGAFGLTCIVLYKYQV-NREVVSFCHSKGVKVYVYTCNTDGLERYAKSLGCDGVVTDTPN 651
IIAHRG S+ +NTM ++ A L DAIE DV +TKDNVPV+ H+ V + T + +N Y+ A + + F Q+ +YL +++K+ + + I +YE Q+ + R +L +FN ++ + L + + D A ++GA L KY++ N+ ++ CH + + V VYT N + +L DG+ TD P+
Sbjct: 5 IIAHRGASRLAPENTMPAFELAYKLGADAIETDVQLTKDNVPVIIHDEHVRRTTNGKGYIKNFTFQALQQLDAGSWFSQKYAGATIVSLDEFLQWIKPKSLYLNIELKNNKIDYTNIETIVYEKLRQYQLINRTILSTFNPASVKRTHELHPDINVALLTSRRNRYLVRD--AKQLGATALHV----KYRLLNQSLIDACHEENMPVRVYTINRSIRMQRCFTLESDGIFTDVPD 233
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: A0A7Y5F672_9FLAO (Glycerophosphodiester phosphodiesterase n=2 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7Y5F672_9FLAO) HSP 1 Score: 76.6 bits (187), Expect = 2.990e-13 Identity = 68/248 (27.42%), Postives = 116/248 (46.77%), Query Frame = 1
Query: 13 IIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAH-NAVDKKTGVAIHCRNYSEADL-------------------SLAEVFEQFSSDTFVYLLDIKDPRACSEICRCIYELCLQFSCLERCVLGSFNEFHLRDLCNIEKTTGCTLKKAYITS----NIHEDMFASR--------IGAFGLTCIVLYKYQVNREVVSFCHSKGVKVYVYTCNT-DGLERYAKSLGCDGVVTDTPNQF 657
+I HRG + +NT++S KA L V+ IE+DV +TKDNVPV+ H N + + T + + + DL SL +V E + + + + I + + +L +F+ + C + SF+ L++ +++ T C L K ++ N H D S + FG+ YKY V R ++ H+ G ++ V+T N D +R A+ +G DG++TD P+ F
Sbjct: 6 LIGHRGAAGLAPENTLVSIKKAMELRVNRIEIDVHLTKDNVPVVIHDNTLSRTTNGSGFIKRKAFEDLQKLSAGIKFSSEFNEEKIPSLQQVLECINGKVELQIEVKHGSKRYPGIEKAVLDLIDRFNGKKWCFINSFDTRVLKEFYSLDST--CILHKLFVLRIPVVNAHIDRTLSSGTLNRYHYVSEFGVN----YKY-VTRSLIEDIHNMGKRINVWTPNDIDSFKRLAE-MGVDGIITDRPDVF 245
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: UPI0009E47758 (glycerophosphodiester phosphodiesterase n=1 Tax=Halobacillus massiliensis TaxID=1926286 RepID=UPI0009E47758) HSP 1 Score: 75.5 bits (184), Expect = 7.830e-13 Identity = 68/241 (28.22%), Postives = 110/241 (45.64%), Query Frame = 1
Query: 13 IIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHNAVDKKT-----------GVAIH--------CRNYSEAD-LSLAEVFEQFSSDTFVYLLDIK----DPRACSEICRCIYELCLQFSCLERCVLGSFNEFHLRDLCNIEKTTGCTLKKAYITSNIHEDM--FASRIGAFGLTCIVLYKYQV-NREVVSFCHSKGVKVYVYTCNTDGLERYAKSLGCDGVVTDTPNQ 654
I AHRG S+ +NTM +Y A D +E+DV +TKDN+PV+ H+ ++T G I YS+ L+L E F V +++K + + EI + +L ++ L R V+ SFN + + + K + A++TS ++ FA GA L KY++ +R+++ C + + + VYT N LGCDG+ TD P+Q
Sbjct: 6 IYAHRGASRMAPENTMAAYQLASDAGADGLEIDVQLTKDNIPVLIHDETVRRTTNGTGFVQDYTGEQIKKLDAGSWFSTKYSDCSILTLEEFLCWFKPLPMVLNVELKTNVIEYKKIEEI---VLDLLKKYDVLYRTVISSFNLNSVTRVHELNKK----VPTAFLTSTARRNLPNFAQEHGASDLHV----KYRLLDRKLLDQCQKEKMPLRVYTINRYSYMAKCFRLGCDGIFTDVPHQ 235
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: A0A2V3W7P5_9BACI (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Pseudogracilibacillus auburnensis TaxID=1494959 RepID=A0A2V3W7P5_9BACI) HSP 1 Score: 75.1 bits (183), Expect = 8.950e-13 Identity = 59/235 (25.11%), Postives = 109/235 (46.38%), Query Frame = 1
Query: 7 MDIIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHNAVDKKT--------------------GVAIHCRNYSEADLSLAEVFEQFSSDTFVYLLDIKD-PRACSEICRCIYELCLQFSCLERCVLGSFNEFHLRDLCNIEKTTGCTLKKAYITSNIHEDMFASRIGAFGLTCIVLYKYQVNREVVSFCHSKGVKVYVYTCNTDGLERYAKSLGCDGVVTDTP 648
M IIAHRG S +NT+ ++ KA DAIE+DV ++KDN+PV+ H+A +T G H + +E +L EV + + + +++K+ P + + + ++ + + R V SF+ L+ L ++ L + + IH + S G + I + V++E++ ++ V+V +YT N + K +G DG++T+ P
Sbjct: 1 MKIIAHRGASTYAPENTIAAFKKAIEQGADAIELDVRLSKDNIPVICHDATINRTSNGKGYIHNLTLKEVKKHDFGSYFHKKYKNETIPTLEEVLQFIGNTPIILHIELKNGPIIPENLEQKVLDVVYRHNFQGRVVYSSFDHLSLKRLAMLDPQAKIGL--LFHMNLIHLFDYISNTG-INIHSIHPNHFYVDKEMIHQARNRNVEVNIYTVNNLKIALEYKKMGVDGLITNDP 232
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Match: A0A2V3WC96_9BACI (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Streptohalobacillus salinus TaxID=621096 RepID=A0A2V3WC96_9BACI) HSP 1 Score: 75.1 bits (183), Expect = 9.940e-13 Identity = 64/246 (26.02%), Postives = 110/246 (44.72%), Query Frame = 1
Query: 13 IIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHN-AVDKKTGVAIHCRNYSEADL-------------------SLAEVFEQFSSDTFVYLLDIKDPRAC-SEICRCIYELCLQFSCLERCVLGSFNEFHLRDLCNIEKTTGCTLKKAYITSN-IHEDMFASRIGAFGLTCIVLYKYQVNREVVSFCHSKGVKVYVYTCNTDGLERYAKSLGCDGVVTDTPNQ---FRHARVE 675
IIAHRG S +NT S+ A D IE+DV ++KDN+PV+ H+ +VD+ T + + RNY+ +L SLA+V + + T +++K R + + +Y++ Q + + SF+ +L+ L K + A +T +H+ + ++ YQ + S V + VYT N + + GCD V+TD PN+ +HA ++
Sbjct: 4 IIAHRGFSNAFPENTAASFDAALKAGADGIELDVHLSKDNIPVVIHDKSVDRVTRHSGYIRNYTLKELEAMDNGSWFNTAFSTMRIQSLADVVTEINDATLTLNIELKPSRNNRAHLAEKVYDVVQQSQTATQIIYSSFDLHYLKQL----KAIDANVMTALLTKERLHKRLLKKHSPYIDGVHLLEKAYQ--SSFYTLLQSLDVYLAVYTVNDEQQLMHLLRSGCDMVITDVPNKAIAIQHALMK 243 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10707.960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10707.960.1 >prot_S-firma_F_contig10707.960.1 ID=prot_S-firma_F_contig10707.960.1|Name=mRNA_S-firma_F_contig10707.960.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=223bp MDIIAHRGDSKQHGDNTMLSYSKARLLAVDAIEMDVCITKDNVPVMAHNAback to top mRNA from alignment at S-firma_F_contig10707:3035..3709- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10707.960.1 ID=mRNA_S-firma_F_contig10707.960.1|Name=mRNA_S-firma_F_contig10707.960.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=675bp|location=Sequence derived from alignment at S-firma_F_contig10707:3035..3709- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10707:3035..3709- >mRNA_S-firma_F_contig10707.960.1 ID=mRNA_S-firma_F_contig10707.960.1|Name=mRNA_S-firma_F_contig10707.960.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1338bp|location=Sequence derived from alignment at S-firma_F_contig10707:3035..3709- (Sphaerotrichia firma ET2_F female)back to top |