mRNA_S-firma_F_contig1070.952.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: D7FTR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR2_ECTSI) HSP 1 Score: 416 bits (1069), Expect = 9.970e-145 Identity = 200/239 (83.68%), Postives = 218/239 (91.21%), Query Frame = 1
Query: 220 MPFPTGTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
MPFPTG+KPVKE D+PRPKLWIYDHCPYC+RPRMV GLKG+ HDLAYLSNDD+ETPT M GKK+VPILELGRPGS+DHEIM ES+DIVKRLD DP FG P LAP VDR+D+D W++S+AM+MRRLVRPR+AVTPL EFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEE+E LWKLE MIHS TSVAADGKLSYND+EFFPRMR LTIVQGLGIPPKLRAYLDAVSE VD+PL
Sbjct: 1 MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPV--LAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPL 237
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A6H5J619_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J619_9PHAE) HSP 1 Score: 415 bits (1067), Expect = 2.520e-143 Identity = 200/239 (83.68%), Postives = 217/239 (90.79%), Query Frame = 1
Query: 220 MPFPTGTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
MPFPTG+KPVKE ++PRPKLWIYDHCPYC+RPRMV GLKG+ HDLAYLSNDD+ETPT M GKK+VPILELGRPGSDDHEIM ES+DIVKRLD DP FG P LAP VDR+D+D W++S+ M+MRRLVRPR+AVTPL EFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEE+E LWKLE MIHS TSVAADGKLSYNDIEFFPRMR LTIVQGLGIPPKLRAYLDAVSE VD+PL
Sbjct: 72 MPFPTGSKPVKEIESPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSDDHEIMAESMDIVKRLDLDPQFGPPV--LAPAVDRKDLDSWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPL 308
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A5J4YKV5_PORPP (Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV5_PORPP) HSP 1 Score: 229 bits (584), Expect = 4.560e-71 Identity = 108/221 (48.87%), Postives = 152/221 (68.78%), Query Frame = 1
Query: 271 PKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIP 933
P+L++Y HCP+C+R + LGLK + H+L +L+NDDV TPT + GKKVVPILE+GRPG HE+M ESLDI+KR+DEDPAFG P + P RQDID WI S + RRL+ PR+ PLPEF AR A++RNH +PEP Y+ N S +L+ +M ++ KL+A++ ++G +S +D+ F R+RSL +++G PPK++AY+D +L DIP
Sbjct: 22 PRLYLYAHCPFCVRVQTALGLKNIKHELVFLANDDVATPTALVGKKVVPILEIGRPGQPGHELMNESLDIIKRIDEDPAFG-PTNLIKPATGRQDIDAWIKESKELNRRLISPRYVRVPLPEFFFAEARAAYIRNHAIPEPGDYDTNFAMSAELLPQMNALMAKLDALVFCEQH-CSEGGVSMDDLVLFSRLRSLELLKGAVWPPKVKAYMDHFHQLTDIP 240
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A6V1VKR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VKR3_HETAK) HSP 1 Score: 214 bits (545), Expect = 2.500e-64 Identity = 107/241 (44.40%), Postives = 153/241 (63.49%), Query Frame = 1
Query: 217 TMPFPTGTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPL-PEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
T P G+ + P++++YDHCPYC R R++LGLK + H+L +++NDD +TP ++ GKK+ PI E HE+M ESLDI+ RLD DP +G P L P DR D +WI + ++ RLV PR+A +PL PEF + ARE +V+ HPLP PS Y+ SP+ +EEM L +LE MI S+ A G LS +D+E F R+R LT+V+GL PPK++AY++ +S+ +PL
Sbjct: 70 TSPISGGSDRLAIKPQALPRVFLYDHCPYCTRVRIILGLKNIKHELVWMANDDFDTPISLVGKKMAPIFEYNSEER-GHEVMAESLDIIARLDSDPKWGPPL--LRPASDRTDFRNWINDNKVLYNRLVNPRYARSPLIPEFTFQEAREVYVKRHPLPAPSDYDVLFAMSPQFVEEMNEKLLELEPMIFSAEHCTAGG-LSVDDVELFSRLRGLTVVRGLSFPPKVKAYIETMSQKTKVPL 306
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A7S2XXQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ8_9STRA) HSP 1 Score: 209 bits (533), Expect = 7.100e-63 Identity = 107/226 (47.35%), Postives = 152/226 (67.26%), Query Frame = 1
Query: 241 KPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSE 918
KP K+ N P+L+IYDHCP+C+R RM+ GLK + H+L ++S+DD +TP + GKKV PILE+ D E+M ES+DIV R+D DP +G P P + R+D+ W+ + + RR + RH + PLPEFQ RSARE F++ HPL EPS Y N S L+EEM L +L+AMI S DG LSY+DI F ++RS+T+++G+ IPPK++AY++++SE
Sbjct: 66 KPKKK--NYLPQLYIYDHCPFCVRARMIFGLKSIKHNLVFMSSDDWDTPEGLVGKKVAPILEIKHEDGKD-EVMPESMDIVWRIDNDPKYGQPLLKGKPEL-REDLAQWMKDTRDLFRRALHTRHVMVPLPEFQFRSAREVFIQRHPLAEPSDYNENYYNSA-LVEEMNQKLLELDAMIFSP-ECCTDGGLSYDDIAVFGKLRSVTLIRGIKIPPKMKAYIESMSE 285
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A0G4EFM6_VITBC (GST N-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFM6_VITBC) HSP 1 Score: 206 bits (524), Expect = 7.190e-61 Identity = 106/226 (46.90%), Postives = 149/226 (65.93%), Query Frame = 1
Query: 271 PKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELG--RPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTP-LPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMI-HSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
P+L++YDHCP+C+R RM+ GLK + HDL Y++NDD+ETPT++ GKK+ PILE+ RPG + IM ESLDIVK +DE G P L P R D+ +W+ S A RRL RPR A + LPEF SAR ++ HPL PSSYE N + S + I + L KL+ MI + ++G +SY+DI+ FPR+R+L+IV+GL PP ++AY++ +S+ D+ L
Sbjct: 108 PRLYVYDHCPFCVRARMIFGLKNIKHDLVYMANDDIETPTHLIGKKMAPILEVRGRRPG--EGLIMPESLDIVKYIDESEEIGAGLPLLKPFSGRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLENPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISEGGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVAL 331
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A2V3IFN8_9FLOR (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN8_9FLOR) HSP 1 Score: 198 bits (503), Expect = 5.480e-59 Identity = 105/237 (44.30%), Postives = 146/237 (61.60%), Query Frame = 1
Query: 226 FPTGTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
PT + P + +P P L++YDHCP+C+R R +LGLK + ++L +L+NDDV TPT + G+KVVPI + P ESLDI K +D DP FG P L R DI W+ AM MRRL R R + PLPEF + ARE ++RNHPL +P YE N S + I +++ L +L MI+S + G LSY+DI FPR+R+LTIV+GL +P +LR Y++ + +IP+
Sbjct: 1 MPTPSLPPRVVLSPLPTLYVYDHCPFCVRVRHLLGLKNIKYNLVFLANDDVTTPTALVGRKVVPIFQ---PQGTGGPAQPESLDICKHVDNDPRFGAPG-LLKSATPRDDIAKWMDELAMPMRRLSRVRFSRAPLPEFVFQEARETYIRNHPLSDPGDYEDNFDRSTEYITQVQERLDELAEMIYSPEHCSPHG-LSYDDIVLFPRLRTLTIVKGLVLPKRLREYVEFQAAAAEIPV 232
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A2V3IZ39_9FLOR (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ39_9FLOR) HSP 1 Score: 194 bits (492), Expect = 4.390e-57 Identity = 104/243 (42.80%), Postives = 149/243 (61.32%), Query Frame = 1
Query: 214 ETMPFPTGTK--PVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
ET P T T P + P P L++YDHCP+C+R R+ LGLK + ++L +L+NDDV+TPT++ G+K+ PI + P + ESLDI +++D D FGTPA L P R+ I WI + M RL RPR A PL EF R +RE F RN+PL +P Y+ N + S I++++ L +L +IHS + G LSY DI FPR+R+LTIV+G+ P ++R Y+D + + +IPL
Sbjct: 14 ETAPSTTLTPSLPPRIVLTPLPNLYVYDHCPFCVRVRLFLGLKNIKYNLVFLANDDVKTPTDLVGRKITPIFQ---PDGANGPAYPESLDICQKIDNDSRFGTPA-LLNPSPPREGIVKWIEDTFEPMGRLSRPRFARAPLAEFVFRDSRETFARNYPLSDPDGYDENFRRSSAYIKKVQDRLERLAQLIHSPQHCSPHG-LSYEDIILFPRLRTLTIVKGIHFPKRIREYIDFQAAVAEIPL 251
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: W7TQ45_9STRA (Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ45_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.120e-56 Identity = 106/236 (44.92%), Postives = 152/236 (64.41%), Query Frame = 1
Query: 235 GTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTP-LPEFQTRSAREAFVRNHPLPEPS-SYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
G K + + RP L+IYDHCP+C+R R++ GLK + H L +L NDD +TPT + GKK+VPILE+ + +M ES+DIVK +DEDP +G P L DR+DI + S A + RR RPR A++ LPEF T +AR AFVRNHP P Y NL+ + L+ ++ L +L+AM+ S V +G +SY+D++ F ++R LT+V GL +PP+L+AY++A E +IPL
Sbjct: 41 GLKMMSTQLDKRPNLYIYDHCPFCVRARIIFGLKRIPHQLIFLDNDDADTPTALVGKKMVPILEM-IDAQGERVVMPESMDIVKLIDEDPRWGPPV--LRRGSDREDIKAFFDSIADLSRRCTRPRFALSSVLPEFHTPAARAAFVRNHPFKSPPFDYTENLQ-NKSLVADLSARLRELDAMLFSDECVT-EGGVSYDDVDLFGKVRGLTVVAGLVLPPRLKAYVEAFGEKTEIPL 271
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A7S0M661_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M661_9CRYP) HSP 1 Score: 188 bits (477), Expect = 1.490e-54 Identity = 101/249 (40.56%), Postives = 150/249 (60.24%), Query Frame = 1
Query: 244 PVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTP-LPEFQTRSAREAFVRNHPLP-----------------EPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
P P P+L++YDHCP+C+R R ++G K + H++ +L+NDD+ETPT + GKKVVPILE+ G E+M ES+DIVKR+DEDP FG L P R+D+ +W + R L RPR+ + LPEF ++ R+A+VRNH LP + Y L+ +P L+ + +L MI +S ++G LSY+D++ F R+RSLTIV+GL +P +RAYL++++ D+PL
Sbjct: 32 PALVVGTPVPRLYVYDHCPFCVRVRFIMGFKNIKHNVVFLANDDIETPTKLVGKKVVPILEIPSYG----EVMKESMDIVKRIDEDPTFGPQL--LKPASGRKDLSEWQDKHQDLFRLLQRPRYVSSGILPEFSQQAGRDAYVRNHALPPYAKEEWSDDKRLPRAMRYAKYAEALQQTPALLPAAAAAVQELGGMI-ASAQHCSEGGLSYDDVDLFGRLRSLTIVRGLPLPDTVRAYLESMAAAADVPL 273 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1070.952.1 >prot_S-firma_F_contig1070.952.1 ID=prot_S-firma_F_contig1070.952.1|Name=mRNA_S-firma_F_contig1070.952.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=313bp HEQAPPAPSSDKQARKTGMLLLLLLPTRLRLSTCLSLSALTQLAAGFAVTback to top mRNA from alignment at S-firma_F_contig1070:17341..21318- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1070.952.1 ID=mRNA_S-firma_F_contig1070.952.1|Name=mRNA_S-firma_F_contig1070.952.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3978bp|location=Sequence derived from alignment at S-firma_F_contig1070:17341..21318- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1070:17341..21318- >mRNA_S-firma_F_contig1070.952.1 ID=mRNA_S-firma_F_contig1070.952.1|Name=mRNA_S-firma_F_contig1070.952.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1878bp|location=Sequence derived from alignment at S-firma_F_contig1070:17341..21318- (Sphaerotrichia firma ET2_F female)back to top |