mRNA_S-firma_F_contig1070.952.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1070.952.1
Unique NamemRNA_S-firma_F_contig1070.952.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: D7FTR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR2_ECTSI)

HSP 1 Score: 416 bits (1069), Expect = 9.970e-145
Identity = 200/239 (83.68%), Postives = 218/239 (91.21%), Query Frame = 1
Query:  220 MPFPTGTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
            MPFPTG+KPVKE D+PRPKLWIYDHCPYC+RPRMV GLKG+ HDLAYLSNDD+ETPT M GKK+VPILELGRPGS+DHEIM ES+DIVKRLD DP FG P   LAP VDR+D+D W++S+AM+MRRLVRPR+AVTPL EFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEE+E  LWKLE MIHS TSVAADGKLSYND+EFFPRMR LTIVQGLGIPPKLRAYLDAVSE VD+PL
Sbjct:    1 MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPV--LAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPL 237          
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A6H5J619_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J619_9PHAE)

HSP 1 Score: 415 bits (1067), Expect = 2.520e-143
Identity = 200/239 (83.68%), Postives = 217/239 (90.79%), Query Frame = 1
Query:  220 MPFPTGTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
            MPFPTG+KPVKE ++PRPKLWIYDHCPYC+RPRMV GLKG+ HDLAYLSNDD+ETPT M GKK+VPILELGRPGSDDHEIM ES+DIVKRLD DP FG P   LAP VDR+D+D W++S+ M+MRRLVRPR+AVTPL EFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEE+E  LWKLE MIHS TSVAADGKLSYNDIEFFPRMR LTIVQGLGIPPKLRAYLDAVSE VD+PL
Sbjct:   72 MPFPTGSKPVKEIESPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSDDHEIMAESMDIVKRLDLDPQFGPPV--LAPAVDRKDLDSWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPL 308          
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A5J4YKV5_PORPP (Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV5_PORPP)

HSP 1 Score: 229 bits (584), Expect = 4.560e-71
Identity = 108/221 (48.87%), Postives = 152/221 (68.78%), Query Frame = 1
Query:  271 PKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIP 933
            P+L++Y HCP+C+R +  LGLK + H+L +L+NDDV TPT + GKKVVPILE+GRPG   HE+M ESLDI+KR+DEDPAFG P   + P   RQDID WI  S  + RRL+ PR+   PLPEF    AR A++RNH +PEP  Y+ N   S +L+ +M  ++ KL+A++       ++G +S +D+  F R+RSL +++G   PPK++AY+D   +L DIP
Sbjct:   22 PRLYLYAHCPFCVRVQTALGLKNIKHELVFLANDDVATPTALVGKKVVPILEIGRPGQPGHELMNESLDIIKRIDEDPAFG-PTNLIKPATGRQDIDAWIKESKELNRRLISPRYVRVPLPEFFFAEARAAYIRNHAIPEPGDYDTNFAMSAELLPQMNALMAKLDALVFCEQH-CSEGGVSMDDLVLFSRLRSLELLKGAVWPPKVKAYMDHFHQLTDIP 240          
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A6V1VKR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VKR3_HETAK)

HSP 1 Score: 214 bits (545), Expect = 2.500e-64
Identity = 107/241 (44.40%), Postives = 153/241 (63.49%), Query Frame = 1
Query:  217 TMPFPTGTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPL-PEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
            T P   G+  +       P++++YDHCPYC R R++LGLK + H+L +++NDD +TP ++ GKK+ PI E        HE+M ESLDI+ RLD DP +G P   L P  DR D  +WI  + ++  RLV PR+A +PL PEF  + ARE +V+ HPLP PS Y+     SP+ +EEM   L +LE MI S+    A G LS +D+E F R+R LT+V+GL  PPK++AY++ +S+   +PL
Sbjct:   70 TSPISGGSDRLAIKPQALPRVFLYDHCPYCTRVRIILGLKNIKHELVWMANDDFDTPISLVGKKMAPIFEYNSEER-GHEVMAESLDIIARLDSDPKWGPPL--LRPASDRTDFRNWINDNKVLYNRLVNPRYARSPLIPEFTFQEAREVYVKRHPLPAPSDYDVLFAMSPQFVEEMNEKLLELEPMIFSAEHCTAGG-LSVDDVELFSRLRGLTVVRGLSFPPKVKAYIETMSQKTKVPL 306          
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A7S2XXQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ8_9STRA)

HSP 1 Score: 209 bits (533), Expect = 7.100e-63
Identity = 107/226 (47.35%), Postives = 152/226 (67.26%), Query Frame = 1
Query:  241 KPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSE 918
            KP K+  N  P+L+IYDHCP+C+R RM+ GLK + H+L ++S+DD +TP  + GKKV PILE+      D E+M ES+DIV R+D DP +G P     P + R+D+  W+  +  + RR +  RH + PLPEFQ RSARE F++ HPL EPS Y  N   S  L+EEM   L +L+AMI S      DG LSY+DI  F ++RS+T+++G+ IPPK++AY++++SE
Sbjct:   66 KPKKK--NYLPQLYIYDHCPFCVRARMIFGLKSIKHNLVFMSSDDWDTPEGLVGKKVAPILEIKHEDGKD-EVMPESMDIVWRIDNDPKYGQPLLKGKPEL-REDLAQWMKDTRDLFRRALHTRHVMVPLPEFQFRSAREVFIQRHPLAEPSDYNENYYNSA-LVEEMNQKLLELDAMIFSP-ECCTDGGLSYDDIAVFGKLRSVTLIRGIKIPPKMKAYIESMSE 285          
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A0G4EFM6_VITBC (GST N-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFM6_VITBC)

HSP 1 Score: 206 bits (524), Expect = 7.190e-61
Identity = 106/226 (46.90%), Postives = 149/226 (65.93%), Query Frame = 1
Query:  271 PKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELG--RPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTP-LPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMI-HSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
            P+L++YDHCP+C+R RM+ GLK + HDL Y++NDD+ETPT++ GKK+ PILE+   RPG  +  IM ESLDIVK +DE    G   P L P   R D+ +W+ S A   RRL RPR A +  LPEF   SAR  ++  HPL  PSSYE N + S + I  +   L KL+ MI +      ++G +SY+DI+ FPR+R+L+IV+GL  PP ++AY++ +S+  D+ L
Sbjct:  108 PRLYVYDHCPFCVRARMIFGLKNIKHDLVYMANDDIETPTHLIGKKMAPILEVRGRRPG--EGLIMPESLDIVKYIDESEEIGAGLPLLKPFSGRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLENPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISEGGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVAL 331          
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A2V3IFN8_9FLOR (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN8_9FLOR)

HSP 1 Score: 198 bits (503), Expect = 5.480e-59
Identity = 105/237 (44.30%), Postives = 146/237 (61.60%), Query Frame = 1
Query:  226 FPTGTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
             PT + P +   +P P L++YDHCP+C+R R +LGLK + ++L +L+NDDV TPT + G+KVVPI +   P         ESLDI K +D DP FG P   L     R DI  W+   AM MRRL R R +  PLPEF  + ARE ++RNHPL +P  YE N   S + I +++  L +L  MI+S    +  G LSY+DI  FPR+R+LTIV+GL +P +LR Y++  +   +IP+
Sbjct:    1 MPTPSLPPRVVLSPLPTLYVYDHCPFCVRVRHLLGLKNIKYNLVFLANDDVTTPTALVGRKVVPIFQ---PQGTGGPAQPESLDICKHVDNDPRFGAPG-LLKSATPRDDIAKWMDELAMPMRRLSRVRFSRAPLPEFVFQEARETYIRNHPLSDPGDYEDNFDRSTEYITQVQERLDELAEMIYSPEHCSPHG-LSYDDIVLFPRLRTLTIVKGLVLPKRLREYVEFQAAAAEIPV 232          
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A2V3IZ39_9FLOR (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ39_9FLOR)

HSP 1 Score: 194 bits (492), Expect = 4.390e-57
Identity = 104/243 (42.80%), Postives = 149/243 (61.32%), Query Frame = 1
Query:  214 ETMPFPTGTK--PVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
            ET P  T T   P +    P P L++YDHCP+C+R R+ LGLK + ++L +L+NDDV+TPT++ G+K+ PI +   P   +     ESLDI +++D D  FGTPA  L P   R+ I  WI  +   M RL RPR A  PL EF  R +RE F RN+PL +P  Y+ N + S   I++++  L +L  +IHS    +  G LSY DI  FPR+R+LTIV+G+  P ++R Y+D  + + +IPL
Sbjct:   14 ETAPSTTLTPSLPPRIVLTPLPNLYVYDHCPFCVRVRLFLGLKNIKYNLVFLANDDVKTPTDLVGRKITPIFQ---PDGANGPAYPESLDICQKIDNDSRFGTPA-LLNPSPPREGIVKWIEDTFEPMGRLSRPRFARAPLAEFVFRDSRETFARNYPLSDPDGYDENFRRSSAYIKKVQDRLERLAQLIHSPQHCSPHG-LSYEDIILFPRLRTLTIVKGIHFPKRIREYIDFQAAVAEIPL 251          
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: W7TQ45_9STRA (Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ45_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.120e-56
Identity = 106/236 (44.92%), Postives = 152/236 (64.41%), Query Frame = 1
Query:  235 GTKPVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTP-LPEFQTRSAREAFVRNHPLPEPS-SYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
            G K +    + RP L+IYDHCP+C+R R++ GLK + H L +L NDD +TPT + GKK+VPILE+      +  +M ES+DIVK +DEDP +G P   L    DR+DI  +  S A + RR  RPR A++  LPEF T +AR AFVRNHP   P   Y  NL+ +  L+ ++   L +L+AM+ S   V  +G +SY+D++ F ++R LT+V GL +PP+L+AY++A  E  +IPL
Sbjct:   41 GLKMMSTQLDKRPNLYIYDHCPFCVRARIIFGLKRIPHQLIFLDNDDADTPTALVGKKMVPILEM-IDAQGERVVMPESMDIVKLIDEDPRWGPPV--LRRGSDREDIKAFFDSIADLSRRCTRPRFALSSVLPEFHTPAARAAFVRNHPFKSPPFDYTENLQ-NKSLVADLSARLRELDAMLFSDECVT-EGGVSYDDVDLFGKVRGLTVVAGLVLPPRLKAYVEAFGEKTEIPL 271          
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Match: A0A7S0M661_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M661_9CRYP)

HSP 1 Score: 188 bits (477), Expect = 1.490e-54
Identity = 101/249 (40.56%), Postives = 150/249 (60.24%), Query Frame = 1
Query:  244 PVKEADNPRPKLWIYDHCPYCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDDHEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRLVRPRHAVTP-LPEFQTRSAREAFVRNHPLP-----------------EPSSYEANLKASPKLIEEMEHMLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAYLDAVSELVDIPL 936
            P      P P+L++YDHCP+C+R R ++G K + H++ +L+NDD+ETPT + GKKVVPILE+   G    E+M ES+DIVKR+DEDP FG     L P   R+D+ +W      + R L RPR+  +  LPEF  ++ R+A+VRNH LP                   + Y   L+ +P L+      + +L  MI +S    ++G LSY+D++ F R+RSLTIV+GL +P  +RAYL++++   D+PL
Sbjct:   32 PALVVGTPVPRLYVYDHCPFCVRVRFIMGFKNIKHNVVFLANDDIETPTKLVGKKVVPILEIPSYG----EVMKESMDIVKRIDEDPTFGPQL--LKPASGRKDLSEWQDKHQDLFRLLQRPRYVSSGILPEFSQQAGRDAYVRNHALPPYAKEEWSDDKRLPRAMRYAKYAEALQQTPALLPAAAAAVQELGGMI-ASAQHCSEGGLSYDDVDLFGRLRSLTIVRGLPLPDTVRAYLESMAAAADVPL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1070.952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTR2_ECTSI9.970e-14583.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J619_9PHAE2.520e-14383.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5J4YKV5_PORPP4.560e-7148.87Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxI... [more]
A0A6V1VKR3_HETAK2.500e-6444.40Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XXQ8_9STRA7.100e-6347.35Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0G4EFM6_VITBC7.190e-6146.90GST N-terminal domain-containing protein n=1 Tax=V... [more]
A0A2V3IFN8_9FLOR5.480e-5944.30Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID... [more]
A0A2V3IZ39_9FLOR4.390e-5742.80Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID... [more]
W7TQ45_9STRA1.120e-5644.92Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=42507... [more]
A0A7S0M661_9CRYP1.490e-5440.56Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1070contigS-firma_F_contig1070:17341..21318 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FTR2
PFAMsGST_N_3,Glutaredoxin2_C
Max annot lvl2759|Eukaryota
Evalue1.63e-145
EggNOG OGsCOG2999@1|root,2RYF1@2759|Eukaryota
DescriptionGlutaredoxin 2, C terminal domain
COG categoryO
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-14_001150.1
Exons5
Model size941
Cds size939
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1070.952.1prot_S-firma_F_contig1070.952.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1070 17341..21318 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815610.8926568-CDS-S-firma_F_contig1070:17340..175471622815610.8926568-CDS-S-firma_F_contig1070:17340..17547Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 17341..17547 -
1696949452.5611646-CDS-S-firma_F_contig1070:17340..175471696949452.5611646-CDS-S-firma_F_contig1070:17340..17547Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 17341..17547 -
1622815610.9051962-CDS-S-firma_F_contig1070:18068..181581622815610.9051962-CDS-S-firma_F_contig1070:18068..18158Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 18069..18158 -
1696949452.5748715-CDS-S-firma_F_contig1070:18068..181581696949452.5748715-CDS-S-firma_F_contig1070:18068..18158Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 18069..18158 -
1622815610.9152029-CDS-S-firma_F_contig1070:18858..190441622815610.9152029-CDS-S-firma_F_contig1070:18858..19044Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 18859..19044 -
1696949452.5863824-CDS-S-firma_F_contig1070:18858..190441696949452.5863824-CDS-S-firma_F_contig1070:18858..19044Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 18859..19044 -
1622815610.9302332-CDS-S-firma_F_contig1070:19355..194941622815610.9302332-CDS-S-firma_F_contig1070:19355..19494Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 19356..19494 -
1696949452.5971277-CDS-S-firma_F_contig1070:19355..194941696949452.5971277-CDS-S-firma_F_contig1070:19355..19494Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 19356..19494 -
1622815610.9403386-CDS-S-firma_F_contig1070:21001..213181622815610.9403386-CDS-S-firma_F_contig1070:21001..21318Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 21002..21318 -
1696949452.6064756-CDS-S-firma_F_contig1070:21001..213181696949452.6064756-CDS-S-firma_F_contig1070:21001..21318Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1070 21002..21318 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1070.952.1

>prot_S-firma_F_contig1070.952.1 ID=prot_S-firma_F_contig1070.952.1|Name=mRNA_S-firma_F_contig1070.952.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=313bp
HEQAPPAPSSDKQARKTGMLLLLLLPTRLRLSTCLSLSALTQLAAGFAVT
ASARSSCTSSLPLRACASVGDETMPFPTGTKPVKEADNPRPKLWIYDHCP
YCIRPRMVLGLKGVVHDLAYLSNDDVETPTNMAGKKVVPILELGRPGSDD
HEIMIESLDIVKRLDEDPAFGTPAPALAPRVDRQDIDDWIASSAMVMRRL
VRPRHAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEEMEH
MLWKLEAMIHSSTSVAADGKLSYNDIEFFPRMRSLTIVQGLGIPPKLRAY
LDAVSELVDIPL*
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mRNA from alignment at S-firma_F_contig1070:17341..21318-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1070.952.1 ID=mRNA_S-firma_F_contig1070.952.1|Name=mRNA_S-firma_F_contig1070.952.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3978bp|location=Sequence derived from alignment at S-firma_F_contig1070:17341..21318- (Sphaerotrichia firma ET2_F female)
CATGAGCAAGCACCGCCAGCACCGAGCAGCGACAAGCAGGCAAGAAAAAC GGGGATGCTGCTGCTGCTGCTGCTGCCCACCCGGCTTCGCCTCTCCACCT GCCTGTCCCTTAGCGCCTTGACACAGCTGGCTGCTGGTTTTGCTGTCACC GCCTCTGCGCGATCTTCCTGCACATCATCGCTGCCTCTGCGTGCGTGTGC GAGCGTTGGCGACGAGACGATGCCCTTCCCCACTGGCACCAAGCCCGTCA AAGAGGCCGACAACCCACGGCCGAAGCTGTGGATCTACGACCATTGCCCT TACTGCATCCGGCCACGGTGAGAGCCAAAAAATGCACACGAAAGCTGAAA TGTTCCCTGTGCGAGAGAGAGGCAGTTTTCGAAGCTTCGTCCACAGCAGC AGCAGTAGACGAACCGCCTTCGGCGTCGCGTGCATGTTGTGGGAGAGCTT TGATGCTGGGCTAGAAGAGGCGTTGGATCCCTCCAGAGGTTGTGCTTAAG AGAGGGTACCGACCTTTACACGCAGAATTGAAAGGATACGCGTCGGCAGG ATTTGGGGGGAGAAACATGTCTTTCTTTGCGTACCCGGCTGGCTCCTGGC TCCAAGCGGAGAGAGCGGGCGATTACAATAGATAAGCCAGACGAGAGCAA CAAACCGAGCGATTTTACGCCGGCTCTACACGTATGTATGTATGCACGAA GAGCACAGGGAAACGTGTTTCTTTTGACCGCAGGCACACGCACACGCACA CGCACTTGTGTGGATTGGGGCGACTAGAAATCACGCCTGCTTCCATCCTT TCCAAGAAGCGCGCACCATTTTTTTTTTTTTCTTCTACGGATACCCCCGT GTTTCCCCGACTGGACGAGGGTCCAGTGTATTTGGTGTAGTAAACGCACA TGTATTTTTTCTTTTTGCTGCCTGTGTGCGCGCACCATTTAAATCTTATA AATCGTAGACCCACATGGAAAACATTCATCTACTTGTAGCGAGAGGCGCT GTGAGCGCTCGAGATGTCTTTTTTTGCGATTTCTCCGCCCCTAAATTACA GCTCGAATCGCCGCGAGACTTGCGACTACCGGTAGCCCCGCGCTGCGATG GCCATGCCAGTGTGCGCTCGCGGTCGGGGCGGCCGTGGCGTGGCTGTAGC GAGTAGCGAGTAGCGAAGGCGCAAACTCGCGTCTACGACCGGTTGGTTCT GTGACGTCACCCTTCGCGAGCCTTCCGAAAAAAGTTGCTTACTTTTGTGC TCCCGAGTTGATATTATATAACAATAAGTAGATTTGACATCGCATTCAGC CTTCGGCGGAGCGGTGGAACTCCGCGGCGGAGCCCCTTGTATTTCGTACA TATAGTAGTGGTCAGTACAGTAGTAGCCGCCCAGCCAATCCAGGCCCCGA GAGACCCGAAAAGTGCCCAACATCCGAGGAAGGACGGAGAGCACCTCACC GCCGTAGAGAGACCCTAAGGTTTGGTCAGCTTAGCTACAATGTACCGACG GAGAAGTTGTGGGTTAGTTTGTATCTTCAGAGCTTAAGATTTAACGCAGC AGCAGCGGAAATATGCAACCACAAGAACGCGCAGCAGCCTGACTTTCGTC CTCAAGTGCACATTCCCTGCCCGCCTGATGACCGAAATCCAATGTTTCCA CTTGGTTCCTTAGTTGTTGTCTCCTCGAGCGGCGTTGTACAATAGGTATG ATGTGCTGCTGTAGCAGCGACAGCGAGCGCGAAAATAGCACGCCCCCACC GCCCTTCATCCTCTTCTCCCCGCCGCACCCTCCCTTCCCCAACCGCAAAA AAAAAAAATGTACGGCCGACGCAGGATGGTGCTCGGGTTGAAGGGGGTCG TGCACGATTTGGCGTACCTGTCGAACGACGACGTGGAAACCCCGACCAAC ATGGCCGGGAAGAAGGTGGTCCCGATCCTCGAGCTCGGCCGCCCTGGGTC CGACGATCACGAGGTGTGTTCGTCAGTCACGCCCAGTCTTCGGGAGCAAT GCAGAAAATACGGGGTACGCCGCCCCCCCCCCCCCCGCCCGCTCGCAGGG GCCGCGAGAGGCGAAACCGGGAGGGAGGCGTTGTGTTGCGTTAGGGGAAG CAAGTTCTCTGGTGAGGGTTTGACGAAAACGCGAAAAACAGAAAAACAGC CCCTACGTAACATGTTGATGGTGGGGGTGGTTGTCTCGTTTTGCCCGGGA TGCCCACCACCACCACCACACCGCGAAGTCTCGTCCGCTCCTGTTTTTCT CTTCGTCCCTCTCATCTGTCGTAGATCATGATCGAGAGCCTCGACATCGT GAAGAGACTGGATGAGGACCCGGCGTTCGGTACGCCGGCGCCGGCGCTCG CCCCGAGAGTCGATCGCCAGGACATCGACGACTGGATCGCCTCCTCCGCC ATGGTCATGCGCCGCCTTGTTCGCCCGAGGCACGCCGTCACGCCTCTTCC GGAGTTCCAGGTGTGGCTTTTCTGTGTGACCCTGGAACACAGAGTAGTGC ATTGGCTTGTTTGGTTTTTTGAAGCCTGTTTGCTTTGGTTGGACAGGCGT CTGGGGACGACTTTCAGTTTGACAGGCCCGCAACTGCTGCTGCTGCTGCT GCTGCTGTAGCTGGTCTGGTACGACTAGCCCTATGTTAGCTTCGTCACTT AAACTCGCTGATGTAGGAGACTCACGGGTATCTCTTGTGAACGGCTGGTT AGTTTTTGGTGCGATGCGGCGGGTGTGGTACACTTAGGTAGACGCTCCGC TGCCAATTTACAATCACCGAATGCGTTGCTGAAGCCTGCATGCGTGGTGG GGTCATTTCGCTTGATTATGTTTGTGTTTTTGTGGAGACTTGACTGACTG AGCCGGGTATCACTGGTTGAGGCTCGGCGGTGCTATGTATGCGGCCGGTT TCCATTCTGGTTTCCTCAGGTCGGCCTTTTACTAAAATTCAACACGATTG TTGTAGGCACGACCGACCGATACAGTACGTCTCTACGGAGTAGCTGTTTT TTGTCGGCATTTCCTCTCCCGTGTTGCGTCTTCCCACGCACCAGAGGCGA AGGAGCAGCAAGTCTTCGACGATGCTTCGCTTCCCATTCCCACGAGTTCG CCTGCGCTTGACGTTCCTCCCGGTACTCCCCTCATGGCCCATCCATCCAT TCCCTTCCAGACTCGATCGGCGAGGGAGGCGTTCGTCCGCAACCACCCCT TGCCAGAGCCCAGCAGCTACGAGGCAAACCTGAAGGCGTCCCCGAAGCTG GTGAGCTACAGCTGGCTGGCTTTTTGACGGCGTTCGTAGATCTAGCGGAC GACATAGGTATTGGGTGAGGTGGGATGGTGTAAAGTAGCGCCGAAGGGTC GCGCTCTACCGTGGCTGTCGGGAGCAGCTATCACTTCTACTTTGGGGCGC GCGGCGTGTGGTTGATGGCGGGAGAGATGGGGGCGGAGCGCCTGGTACTT GAGGGTGGTTGAGCGTGCAGTTTTTTTTTTTTTCATTCTTTCGGCTCGCT TGGGCGAAAGCGACCTTCTAGCAATTGCTCGTAAGAGTTGATGCCCCAAA CATTCTGTGGTGATGAGACGAGCAACTTACTGGGTCGGGGTCGTCCCCGT GGGCGTTGGTGGTGGTGCGAACGATCCGATCCCTTCTTCGGTACTACTGC TGTAGCGTCCGCGGCTTTTCGTTTATTGAGGAGGGATGCTGTGTGCCCAC TCTGTGGGTGTCGAGCCACTATTGAACATCTGCTGCTGCTACTGCCGTCG TCGCAACGCCCGAACGGATAGATCGAGGAAATGGAGCACATGCTGTGGAA GCTGGAGGCGATGATCCACAGCTCCACCAGCGTAGCTGCGGACGGAAAGC TGTCTTACAACGACATCGAGTTTTTCCCCCGCATGCGCAGCCTGACGATC GTCCAGGGCCTGGGCATCCCGCCCAAGCTCCGCGCCTACCTCGACGCGGT GTCCGAGCTGGTCGACATACCGCTGTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig1070:17341..21318-

>mRNA_S-firma_F_contig1070.952.1 ID=mRNA_S-firma_F_contig1070.952.1|Name=mRNA_S-firma_F_contig1070.952.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1878bp|location=Sequence derived from alignment at S-firma_F_contig1070:17341..21318- (Sphaerotrichia firma ET2_F female)
CATGAGCAAGCACCGCCAGCACCGAGCAGCGACAAGCAGGCAAGAAAAAC
GGGGATGCTGCTGCTGCTGCTGCTGCCCACCCGGCTTCGCCTCTCCACCT
GCCTGTCCCTTAGCGCCTTGACACAGCTGGCTGCTGGTTTTGCTGTCACC
GCCTCTGCGCGATCTTCCTGCACATCATCGCTGCCTCTGCGTGCGTGTGC
GAGCGTTGGCGACGAGACGATGCCCTTCCCCACTGGCACCAAGCCCGTCA
AAGAGGCCGACAACCCACGGCCGAAGCTGTGGATCTACGACCATTGCCCT
TACTGCATCCGGCCACGCATGAGCAAGCACCGCCAGCACCGAGCAGCGAC
AAGCAGGCAAGAAAAACGGGGATGCTGCTGCTGCTGCTGCTGCCCACCCG
GCTTCGCCTCTCCACCTGCCTGTCCCTTAGCGCCTTGACACAGCTGGCTG
CTGGTTTTGCTGTCACCGCCTCTGCGCGATCTTCCTGCACATCATCGCTG
CCTCTGCGTGCGTGTGCGAGCGTTGGCGACGAGACGATGCCCTTCCCCAC
TGGCACCAAGCCCGTCAAAGAGGCCGACAACCCACGGCCGAAGCTGTGGA
TCTACGACCATTGCCCTTACTGCATCCGGCCACGGATGGTGCTCGGGTTG
AAGGGGGTCGTGCACGATTTGGCGTACCTGTCGAACGACGACGTGGAAAC
CCCGACCAACATGGCCGGGAAGAAGGTGGTCCCGATCCTCGAGCTCGGCC
GCCCTGGGTCCGACGATCACGAGGATGGTGCTCGGGTTGAAGGGGGTCGT
GCACGATTTGGCGTACCTGTCGAACGACGACGTGGAAACCCCGACCAACA
TGGCCGGGAAGAAGGTGGTCCCGATCCTCGAGCTCGGCCGCCCTGGGTCC
GACGATCACGAGATCATGATCGAGAGCCTCGACATCGTGAAGAGACTGGA
TGAGGACCCGGCGTTCGGTACGCCGGCGCCGGCGCTCGCCCCGAGAGTCG
ATCGCCAGGACATCGACGACTGGATCGCCTCCTCCGCCATGGTCATGCGC
CGCCTTGTTCGCCCGAGGCACGCCGTCACGCCTCTTCCGGAGTTCCAGAT
CATGATCGAGAGCCTCGACATCGTGAAGAGACTGGATGAGGACCCGGCGT
TCGGTACGCCGGCGCCGGCGCTCGCCCCGAGAGTCGATCGCCAGGACATC
GACGACTGGATCGCCTCCTCCGCCATGGTCATGCGCCGCCTTGTTCGCCC
GAGGCACGCCGTCACGCCTCTTCCGGAGTTCCAGACTCGATCGGCGAGGG
AGGCGTTCGTCCGCAACCACCCCTTGCCAGAGCCCAGCAGCTACGAGGCA
AACCTGAAGGCGTCCCCGAAGCTGACTCGATCGGCGAGGGAGGCGTTCGT
CCGCAACCACCCCTTGCCAGAGCCCAGCAGCTACGAGGCAAACCTGAAGG
CGTCCCCGAAGCTGATCGAGGAAATGGAGCACATGCTGTGGAAGCTGGAG
GCGATGATCCACAGCTCCACCAGCGTAGCTGCGGACGGAAAGCTGTCTTA
CAACGACATCGAGTTTTTCCCCCGCATGCGCAGCCTGACGATCGTCCAGG
GCCTGGGCATCCCGCCCAAGCTCCGCGCCTACCTCGACGCGGTGTCCGAG
CTGGTCGACATACCGCTGTGAATCGAGGAAATGGAGCACATGCTGTGGAA
GCTGGAGGCGATGATCCACAGCTCCACCAGCGTAGCTGCGGACGGAAAGC
TGTCTTACAACGACATCGAGTTTTTCCCCCGCATGCGCAGCCTGACGATC
GTCCAGGGCCTGGGCATCCCGCCCAAGCTCCGCGCCTACCTCGACGCGGT
GTCCGAGCTGGTCGACATACCGCTGTGA
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