mRNA_S-firma_F_contig107.940.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: D8LE88_ECTSI (Flavoprotein Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE88_ECTSI) HSP 1 Score: 449 bits (1154), Expect = 2.320e-155 Identity = 212/268 (79.10%), Postives = 243/268 (90.67%), Query Frame = 1
Query: 469 IAKVMGYPFIGITRYALQTVLLSHLEDGDLELGACLQGLETHEAEGITELRFEGHAEPIRARAVIGADGRRSFVRRQVLAAEERNCDWVLAWWALADIPDPVTPKGEFRMSYNTKQCVYYGEVEEGVTMWSFSCWRQGEIERDPKLRAGRALKELEGWPEELRNLVKNTPPHKIIEVSVGDSPLQWTSWSKQPGVSLMGDAAHSMMPTLAMGVTSALQDAAALTKRVHGVETPLFEALKEYESARRIPATMLQLVSRIAMVFVENVLC 1272
I K++GYPFIGI+R+ALQ VLL HLED D+ELGA L+ L+T E EGITELRF G +E +RARAVIGADGRRS VR++VLAAEERNCDW L WWALADIP+P TPKGEFRMSY+TKQ +YYGEVEEGVTMWSF+CWR GEIERDP+LRAGRALKELEGWPEE+RN+V+NTPP+KIIEV VGDSPLQWT+WSKQPGVSLMGDAAHSM+PTLAMGVT+ALQDAAALTK + +TPL EALKEYE+ARR+P+ LQL+SR+AMVF+ENVLC
Sbjct: 4 ITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLERLDTDEGEGITELRFRGQSEVVRARAVIGADGRRSIVRKKVLAAEERNCDWALTWWALADIPEPATPKGEFRMSYSTKQAIYYGEVEEGVTMWSFTCWRDGEIERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTLAMGVTTALQDAAALTKCIDNADTPLMEALKEYENARRVPSATLQLISRVAMVFIENVLC 271
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: A0A6H5JVL1_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVL1_9PHAE) HSP 1 Score: 346 bits (888), Expect = 8.860e-116 Identity = 163/209 (77.99%), Postives = 187/209 (89.47%), Query Frame = 1
Query: 334 TFGLAKLDEILPGLAAEAIAVGREVDRLHLTRPSGETIAKFDMRFIAKVMGYPFIGITRYALQTVLLSHLEDGDLELGACLQGLETHEAEGITELRFEGHAEPIRARAVIGADGRRSFVRRQVLAAEERNCDWVLAWWALADIPDPVTPKGEFRMSYNTKQCVYYGEVEEGVTMWSFSCWRQGEIERDPKLRAGRALKELEGWPEELRN 960
+FGLA+LD+I PGLAAEA+A GREV+ LHLTRPSGETIAK DM I K++GYPFIGI+R+ALQ VLL HLED D+ELGA L+GL+THE EGITELRF G +E +RARAVIGADGRRS VR++VLAAEERNCDW L WWALADIP+P TPKGEFRMSY+TKQ +YYGEVEEGVTMWSF+CWR GE+ERDP+LRAGRALKELEGWPEE+ +
Sbjct: 2 SFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVIGADGRRSIVRKKVLAAEERNCDWALTWWALADIPEPTTPKGEFRMSYSTKQAIYYGEVEEGVTMWSFTCWRDGEVERDPELRAGRALKELEGWPEEVNS 210
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: A0A6H5JXQ7_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ7_9PHAE) HSP 1 Score: 180 bits (456), Expect = 5.630e-52 Identity = 86/109 (78.90%), Postives = 100/109 (91.74%), Query Frame = 1
Query: 946 EELRNLVKNTPPHKIIEVSVGDSPLQWTSWSKQPGVSLMGDAAHSMMPTLAMGVTSALQDAAALTKRVHGVETPLFEALKEYESARRIPATMLQLVSRIAMVFVENVLC 1272
EE+RN+V+NTPP+KIIEV VGDSPLQWT+WSKQPGVSLMGDAAHSM+PTLAMGVT+ALQDAAALT + ETPL EALKEYE+ARR+P+ LQL+SR+AMVF+ENVLC
Sbjct: 27 EEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTLAMGVTTALQDAAALTNCIDNAETPLTEALKEYENARRVPSATLQLISRVAMVFIENVLC 135
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: A0A838VK70_9NOST (FAD-dependent monooxygenase n=1 Tax=Nostocaceae cyanobacterium TaxID=2723028 RepID=A0A838VK70_9NOST) HSP 1 Score: 137 bits (345), Expect = 8.040e-33 Identity = 119/362 (32.87%), Postives = 163/362 (45.03%), Query Frame = 1
Query: 196 VLDFAIIGGGPAGLAAAVGLKERGLNVKVFEAAPVISERGAAVFLQTFGLAKLDEILPGLAAEAIAVGREVDRLHLTRPSGETIAKFDMRFIAKVMGYPFIGITRYALQTVLLSHLEDG-DLELGACLQGLETHEAEGITELRFE-GHAEPIRARAVIGADGRRSFVRRQVLAAEERNCDWVLAWWA------LADIPDPVTPKGEFRMSYNTKQCVYYGEVEEGVTMWSFSCWRQGEIERDPKLRAGRALKELEGWPEELRNLVKNTPPHKIIEVSVGD-SPL-QWTSWSKQPGVSLMGDAAHSMMPTLAMGVTSALQDAAALTKRVHGVETPLFE----ALKEYESARRIPATMLQLVSR 1239
VLD AIIG GP GL AA L G ++ VFE A V+ GAA+ L G A L EI LA + + R L RP+ E + + + + G F + Y LQT L L L L L G E +G +LR + E + AR +IGADG S VR +A + W LA + DP F++ K+ + + + W + RQ + L+ L+ E WP + L++ T IIE V D P+ QW W + V+L+GDAAH M P+L +G T A+QDA AL K + G + E AL YE R + LQ +R
Sbjct: 10 VLDVAIIGAGPGGLCAAHALARLGFSIGVFEQARVLRPIGAALGLADMGYAALAEIDADLAQQVRGLAVNPQRQMLMRPNSEVLFVDE----SPLAGTGFTWLCWYNLQTCLYKALPATVSLHLNHTLSGFERISEQGQEQLRLKFRQQEDVCARLLIGADGYNSVVRNITVADGAPLYTGTMTWRGIVNRKNLAPLADPFVDSAGFQLVVGEKKNFWIMDAGTELLAWGGTALRQNSEKSSSALQT--VLQVFEQWPPLVERLIRATEEETIIETGVFDREPVSQWGDWKR---VTLLGDAAHPMRPSLGLGTTMAIQDAVALAKVLAGTDLGNSEQLGVALHTYEQERIAISAPLQRQAR 362
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: UPI0006E3C913 (FAD-dependent monooxygenase n=1 Tax=Streptomyces sp. NBRC 110028 TaxID=1621260 RepID=UPI0006E3C913) HSP 1 Score: 135 bits (339), Expect = 7.550e-32 Identity = 108/338 (31.95%), Postives = 156/338 (46.15%), Query Frame = 1
Query: 211 IIGGGPAGLAAAVGLKERGLNVKVFEAAPVISERGAAVFLQTFGLAKLDEILPGLAAEAIAVGREVDRLHLTRPSGETIAKFDMRFIAKVMGYPFIGITRYALQTVLLSHLEDGDLELGACLQGLETHEAEGI--TELRFEGHAEPIRARAVIGADGRRSFVRRQVLAAEERNCDWVLAWWALADIPDPVTPKGEFRMSYNTKQCVYYGEVEEGVTMWSFSCW--RQGEIERDPKLRAGRALKELE--GWPEELRNLVKNTPPHKIIEVSVGDSPLQWTSWSKQPGVSLMGDAAHSMMPTLAMGVTSALQDAAALTKRVHGVETPLFEALKEYESARR 1206
++G G GL AA+ L+E GL+V+V E A + G+ + + + LA LD I GL G+ + H+ G I +F I +G P + ITR ALQ LL + + LGA +G T E G +RF E +IGADG S VRR ++ EE + W AL P G + + Q ++ G W W + ER + G+A EL GW EE+R+ ++ TP I+ D W + P V+L+GDAAH M+P+L G A++DA L++ + PL AL+ YE RR
Sbjct: 11 VVGAGIGGLTAAIALREAGLDVEVHERADELRAAGSGLSVMSNALAALDSI--GLDLGLDKHGQILTSYHVRTARGRLIREFPFPEIIGRLGVPSVLITRSALQQALLDAADGIPIRLGATAEGFSTEERRGGPGVAVRFSDGTET-HGDLLIGADGFNSVVRRGLVGPEEARYGGYVCWLALVPFSHPRFTTGSVTHYWGSGQRFGLVDMGGGTLYW----WGTKNMPAERAHDWKGGKADIELAYAGWAEEVRHAIRQTPEESILATPSHDRVFL-DRWGRGP-VTLLGDAAHPMLPSLGQGSGMAMEDAVVLSRHLARAADPL-RALRAYEDERR 338
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: A0A2S6N7C4_RHOGL (FAD_binding_3 domain-containing protein n=2 Tax=Rhodopila globiformis TaxID=1071 RepID=A0A2S6N7C4_RHOGL) HSP 1 Score: 131 bits (330), Expect = 8.860e-31 Identity = 112/350 (32.00%), Postives = 177/350 (50.57%), Query Frame = 1
Query: 199 LDFAIIGGGPAGLAAAVGLKERGLNVKVFEAAPVISERGAAVFLQTFGLAKLDEILPGLAAEAIAVGREVDRLHLTRPSGETIAKFDMRFIAKVMGYPFIGITRYALQTVLLSHLEDGDLELGACLQGLETHEAEGITELRFEGHAEPIRARAVIGADGRRSFVRRQVLAAEERNCDWVLAWWALAD------IPDPVTPKGEFRMSYNTKQCVYYGEVEEGVTMWSFSC-WRQGEIERDPKLRAGRALKELEGWPEELRNLVKNTPPHKIIEVSVGD-SPLQWTSWSKQPGVSLMGDAAHSMMPTLAMGVTSALQDAAALTKRVHGVETPLFEALKEYESARRIPATML 1224
+ AIIG G GLA+A+ L++RG++V+VFE A + GA + L GL L+ I P + A + +G + RL+L R +G+ I + + F+ + G P + I LQ VL L+ + L L G E +G++ L F+G +P+ A ++GADG S VR+ ++ L W ++ +PD VT F + + + +V G+ WS + W I D R + GW +++++ TPP I+E + D +PL SW + V+L+GDAAH+M+P+L G A +DA L + + G E AL YES+R IP T +
Sbjct: 6 MKVAIIGAGLGGLASAIALRKRGVDVQVFERARELRPIGAGLTLAPNGLKALNAIDPDIVARLLELGSQNSRLYLRRANGDLITEIPITFMDRY-GQPMLNIVWSCLQKVLTGFLKADAVRLDHRLVGFERTN-DGLS-LHFDGR-DPVTADVLVGADGINSTVRQIMVGDGPPRYAGRLCWRSVVSYQHPSLLPDEVT----FFAGVDGRNFSMF-DVGSGLVFWSATALWPAWPIS-DGIAPRQRVTEAFAGWAPLVQDVLAATPPEDIVERPIEDRAPL--ASW-RSHRVTLLGDAAHAMVPSLGQGANMAFEDAWELAQALAG-EPDTQAALIHYESSR-IPRTQV 340
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: UPI001FD2ACAE (FAD-dependent monooxygenase n=1 Tax=Brasilonema sp. CT11 TaxID=2748322 RepID=UPI001FD2ACAE) HSP 1 Score: 131 bits (329), Expect = 1.920e-30 Identity = 112/343 (32.65%), Postives = 167/343 (48.69%), Query Frame = 1
Query: 205 FAIIGGGPAGLAAAVGLKERGLNVKVFEAAPVISERGAAVFLQTFGLAKLDEILPGLAAEAIAVGREVDRLHLTRPSGETIAKFDMRFI-AKVMGYPFIGITRYALQTVLLSHLEDGDLELGACLQGLETHEAEGITELRFEGHAEPIRARAVIGADGRRSFVRRQVLAAEERNCDWVLAWWALADIPDPVTPKGEFRMSYNTKQCVYYGEVEEGVTMWSFSCWRQG-EIERDPKLRAGRALKELEGWPEELRNLVKNTPPHKIIEVSVGD-SPLQWTSWSKQPGVSLMGDAAHSMMPTLAMGVTSALQDAAALTKRVHGVETPLFEALKEYESARRIPATML 1224
AI+GGG GLAAAV L+++G +V V+E A GA + + GL L I P + + G +V + L + +GET+ +R + G PFI I + LQ +L S L + L G E +E +G+ E+ FE + + A +IGADG RS VR +++ + ++W A+ + E +Q ++ V +G W F + L R L EL GW E LR LV+ T +I+E + D +PL T WSK V+L+GDAAH M P+L G ++ +DA L + + + EAL YE RRI T +
Sbjct: 25 IAIVGGGLGGLAAAVALQKQGFDVHVYERAQEFRPAGAGLGIGANGLNFLAAIEPSIVEDLKHSGCDVRQAILKKMTGETVQSNPIRSRNLEKYGQPFITIWWWRLQQILASKLPPEIIHLNHRCIGFEQNE-KGV-EIYFEDQKK-VYADLLIGADGLRSVVREKLIGDGTPHYVGSMSWRAVIKYNQELLKPDELVFIKGNRQRMFLLNVGDGYICWIFRKLSSDFSVSDSATLAKSRVLNELAGWDESLRGLVEATEAEQILEGPICDRAPL--THWSKGR-VTLLGDAAHPMAPSLGQGANTSFEDAYELAQ-CFSQSSSIEEALTSYEK-RRIERTQI 359
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: UPI0016892B15 (FAD-dependent monooxygenase n=2 Tax=Microcoleus sp. FACHB-68 TaxID=2692826 RepID=UPI0016892B15) HSP 1 Score: 129 bits (323), Expect = 1.070e-29 Identity = 108/344 (31.40%), Postives = 168/344 (48.84%), Query Frame = 1
Query: 199 LDFAIIGGGPAGLAAAVGLKERGLNVKVFEAAPVISERGAAVFLQTFGLAKLDEILPGLAAEAIAVGREVDRLHLTRPSGETIAKFDMRFIAKVMGYPFIGITRYALQTVLLSHLEDGDLELGACLQGLETHEAEGITELRFEGHAEPIRARAVIGADGRRSFVRRQVLAAEERNCDWVLAWWALADIPDPV-TPKGEFRMSYNTKQCVYYGEVEEGVTMWSFSCWRQGE--IERDPKLRAGRALKELEGWPEELRNLVKNTPPHKIIEVSVGD-SPLQWTSWSKQPGVSLMGDAAHSMMPTLAMGVTSALQDAAALTKRVHGVETPLFEALKEYESARRIPAT 1218
++ AIIGGG GLA A+ L + G NV+V+E A + GA + L GL L+ I PGL G +++ L L R +GE IA + + G P + I LQ +L S L + L G E HE+ E FE + + I++ +IGADG S VR++++ ++W A+ P P+ TP ++ + +V EG T WS + +R +A R L+ W + + +++ TP +I+E + D +PLQ WS + V+L+GDAAH ++P+L G +A +DA L + + P EA + RIP T
Sbjct: 11 MNIAIIGGGIGGLATAITLLKHGFNVQVYERAQALRPIGAGLTLTPNGLNTLNAIQPGLVESLKQAGSQMNTLILKRSTGEIIASKPLTALEHY-GQPLLNIQWSRLQAILASLLPSDIIHLNHQCIGFEQHESS--VETHFE-NGKTIQSDLLIGADGINSVVRQKLIGDGSPLYAGRMSWRAVIQYPHPLLTPNLATLITAADGKNFLLVDVGEGYTFWSAGALLADDSVCQRATDAKA-RVLEIFAEWADPVEAIIQATPADEIVERPICDRTPLQ--RWS-EGRVTLLGDAAHPVVPSLGQGANTAFEDAYELAECLS--LAPSIEAALDAYERHRIPRT 344
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: UPI001390E072 (FAD-dependent monooxygenase n=3 Tax=Nostocaceae TaxID=1162 RepID=UPI001390E072) HSP 1 Score: 128 bits (321), Expect = 1.820e-29 Identity = 105/344 (30.52%), Postives = 165/344 (47.97%), Query Frame = 1
Query: 211 IIGGGPAGLAAAVGLKERGLNVKVFEAAPVISERGAAVFLQTFGLAKLDEILPGLAAEAIAVGREVDRLHLTRPSGETIAKFDMRFIAKVMGYPFIGITRYALQTVLLSHLEDGDLELGACLQGLETHEAEGITELRFEGHAEPIRARAVIGADGRRSFVRRQVLAAEERNCDWVLAWWALADIPDPVTPKGEFRMSYNTKQCVYYG--EVEEGVTMWSFSCWRQGEIERDPKLRA-GRALKELEGWPEELRNLVKNTPPHKIIEVSVGDS-PLQWTSWSKQPGVSLMGDAAHSMMPTLAMGVTSALQDAAALTKRVHGVETPLFEALKEYESARRIPATMLQL 1230
IIG G GL A+ L+++G++ +V+E A + GA + L GL LD I PG+ G + L+L + +GE IA+ + FI K G P + I LQ +L S L + L G E + + G+ EG ++A +IGADG S VR+ ++ ++W A+ + P E MS +G ++ G WS + E + R ++ GW E ++ +VK T IIE + D PLQ +WS Q V+L+GDAAH M+P L G +A +DA L++ + T + AL YE++R+ ++Q+
Sbjct: 7 IIGAGLGGLTVAIALRKQGIDAQVYEKAYSLRPIGAGLTLFPNGLNSLDAIAPGIVESLEGAGSQTHTLNLRKSTGELIAQKSVTFIEKY-GRPMLQIRWSRLQEILASALPTDAIHLNHRCIGFEQNNS-GVEVCFDEGKT--VQADLLIGADGLNSAVRQTLIGDGSPRYAGRMSWRAVLKYSHELLPPNEV-MSMTAPDGKIFGFFDLGSGYLFWSAATLAPDEFVAQSAIDVKSRVQEKFSGWAEPVQAIVKATDAEDIIERPISDRLPLQ--NWS-QGRVTLLGDAAHPMVPLLGQGANTAFEDAWELSQCLSSAST-IEAALANYENSRKPRTQVIQI 341
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Match: A0A3B8Y6P0_9CYAN (FAD-binding monooxygenase n=1 Tax=Cyanothece sp. UBA12306 TaxID=2055757 RepID=A0A3B8Y6P0_9CYAN) HSP 1 Score: 127 bits (320), Expect = 2.760e-29 Identity = 104/350 (29.71%), Postives = 166/350 (47.43%), Query Frame = 1
Query: 199 LDFAIIGGGPAGLAAAVGLKERGLNVKVFEAAPVISERGAAVFLQTFGLAKLDEILPGLAAEAIAVGREVDRLHLTRPSGETIAKFDMRFIAKVMGYPFIGITRYALQTVLLSHLEDGDLELGACLQGLETHEAEGITELRFEGHAEPIRARAVIGADGRRSFVRRQVLAAEERNCDWVLAWWALADIPDPVTPKGEFRMSYNTKQCVYYGEVEEGVTMWSFSCWR-QGEIERDPKLRAGRALKELEGWPEELRNLVKNTPPHKIIEVSVGDSPLQWTSWSKQPGVSLMGDAAHSMMPTLAMGVTSALQDAAALTK---RVHGVETPLFEALKEYESARRIPATMLQLVS 1236
++ AIIG G GLA A+ L+++G V+V+E A G + L GL L+ I P L + G + ++ + +GETI + + G I I + LQ +L L + + L Q L+ + E + F+G + RA +IGADG S VR+ + E+ N ++W A + E + KQ ++ + +G W+ + + + + + R L++L W E +RN++KNTP KI V + D P SWS Q V+L+GDAAH M P++ G SA +DA LT+ R +E A +YE R ++Q+ S
Sbjct: 13 INIAIIGAGLGGLACAIALRKQGFEVQVYEQAKDFRPVGGGLGLFPNGLNFLELIEPDLVEQIKNYGCCLQKIVVKNIAGETINSNPTTQLIEKYGRTIITIWWWHLQQILAKKLPENCIHLDC--QCLDFEQTEQDVIIHFKG-GKTARADLLIGADGIHSAVRKTLFGDEQINYLKSMSWRANLKCQQELIKPDEIVRIISDKQFLFLVNIGDGYINWTTRKFAPEYHLSTNSQAMKDRILQDLTNWAEPIRNIIKNTPADKIFAVPICDRP-PLNSWS-QGRVTLLGDAAHPMSPSMGQGANSAFEDAWVLTQCLARFSNIEG----AFNQYEKERIERTKIMQIKS 353 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig107.940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig107.940.1 >prot_S-firma_F_contig107.940.1 ID=prot_S-firma_F_contig107.940.1|Name=mRNA_S-firma_F_contig107.940.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=426bp MKTNARECLLASVLVLSVGVTTAFVTPPVRSIRARGQALAAATAVSSPVAback to top mRNA from alignment at S-firma_F_contig107:1089..5964+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig107.940.1 ID=mRNA_S-firma_F_contig107.940.1|Name=mRNA_S-firma_F_contig107.940.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4876bp|location=Sequence derived from alignment at S-firma_F_contig107:1089..5964+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig107:1089..5964+ >mRNA_S-firma_F_contig107.940.1 ID=mRNA_S-firma_F_contig107.940.1|Name=mRNA_S-firma_F_contig107.940.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2556bp|location=Sequence derived from alignment at S-firma_F_contig107:1089..5964+ (Sphaerotrichia firma ET2_F female)back to top |