mRNA_S-firma_F_contig10676.913.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: F2U3E7_SALR5 (Alpha-L-fucosidase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U3E7_SALR5) HSP 1 Score: 380 bits (976), Expect = 3.760e-127 Identity = 186/335 (55.52%), Postives = 231/335 (68.96%), Query Frame = 1
Query: 1 SCDSGRSVVFNLVCDPSAPVSNPPNGTVEEFPRCTY--------NIEWYHPAACGVDKP---GAQCPTAAVPVPTADQLKYITNEIMGLTHFNMATFVRDGDPACDSTNWNTGVNCSNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLPNGHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYLGTVHFNQLGKLLPGQV-NVTMDEYNSIVFAHLQELWGQYGNFTEIWLDHGFAPSQQSRLQEMLATLQPQTNAFNGFGVSPNPVKWCGTESGKPGYPLWSTGCEQQHGDPTSSTFCPTGVDTEL 969
+C +GR+VV +C N V FP Y ++ + A GV +P CPT +VP+PT Q +Y +EI+GLTHFNMATFV +GDPAC STNWN GVNCSNPAVFNPV L++ NW+ SY A+GAKHAVLTAKHGCGFL++ T T+LPNG YGYGV R +VPSF R+V EF + AAGLG GFYYSTGNN+YL + F G LLPGQV NVT EYN++VF H++ELW +YGN TEIW DHG+A Q++ LQ++L QP FNG+G+ P+PVKWCGTESG P WSTGC+ G+P ++++CPTGVDT L
Sbjct: 2 TCRAGRAVVHRFICARH----NKAEEAVAAFPLGAYGHLGPACVHMTVHRTNASGVCQPRHAATPCPTNSVPLPTLAQQRYQRHEIVGLTHFNMATFVHNGDPACSSTNWNQGVNCSNPAVFNPVKLDIDNWIASYKALGAKHAVLTAKHGCGFLLWSTNTSLPNGRPYGYGVQRPNVPSFPRDVVLEFSTKMQAAGLGHGFYYSTGNNFYLNRIDFKPAGALLPGQVVNVTDKEYNTLVFEHVRELWSRYGNLTEIWFDHGYAGDQKAALQQLLQQYQPHAAGFNGYGIMPSPVKWCGTESGTPPRGFWSTGCDASSGNPNATSYCPTGVDTTL 332
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: A9UY68_MONBE (Alpha-L-fucosidase n=2 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UY68_MONBE) HSP 1 Score: 353 bits (905), Expect = 5.590e-115 Identity = 171/321 (53.27%), Postives = 215/321 (66.98%), Query Frame = 1
Query: 1 SCDSGRSVVFNLVCDPSAPVSNPPNGTVEEFPRCTYNIEWYHPAACGVDKPGAQCPTAAVPVPTADQLKYITNEIMGLTHFNMATFVRDGDPACDSTNWNTGVNCSNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLPNGHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYLGTVHFNQLGKLLPGQVNVTMDEYNSIVFAHLQELWGQYGNFTEIWLDHGFAPSQQSRLQEMLATLQPQTNAFNGFGVSPNPVKWCGTESGKPGYPLWSTGCEQQHGDPTSSTFCPTGVDT 963
+C GR+ V VCD + P P C AAC + C T VPVPT +Q Y +EIMGLTHFNMATFV DGDPAC+ TNWN GV+ S+ ++F+P LN+SNWVE+Y AVGAKHAVLTAKHGCGFL+++T+TTLPNG EY + V R S PSF R+V EF TL AAGLG G+YYSTGNNY+L F ++G LPGQV++T ++YN++VF H++ELW ++G+ EIW DHG + Q +L +L QPQ FNG G+ +P+KW GTESG GYP W+TGC GDPT+S +CP G DT
Sbjct: 82 TCPKGRATVTQYVCDRALTGVQPRGAEGWLDPWCVTVQRHETQAACRAEWSKMPCATNQVPVPTPEQAAYQRHEIMGLTHFNMATFVEDGDPACNPTNWNVGVHSSHASLFDPTRLNISNWVENYRAVGAKHAVLTAKHGCGFLLWNTSTTLPNGTEYPFAVARSSYPSFQRDVIAEFSSTLGAAGLGYGYYYSTGNNYFLNRDGFKRIGNPLPGQVDLTDEQYNTLVFEHVKELWTRFGSLFEIWFDHGVSADQDQQLAALLKQYQPQVVGFNGQGIMTSPIKWVGTESGLAGYPTWATGCSVAQGDPTASDYCPVGGDT 402
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: A0A7S0P7P9_CAFRO (Alpha-L-fucosidase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P7P9_CAFRO) HSP 1 Score: 350 bits (897), Expect = 6.470e-113 Identity = 179/328 (54.57%), Postives = 217/328 (66.16%), Query Frame = 1
Query: 1 SCDSG-RSVVFNLVCDPSAPVSNPPNGTVEEFPRCTYNIEWYHPAACGVDKPGAQCPTAAVPVPTADQLKYITNEIMGLTHFNMATFVR-DGDPACDSTNWNTGVNCSNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLP---NGHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYLGTVHFNQLGKLLPGQVNVTMDEYNSIVFAHLQELWGQYGNFTEIWLDHGFAPSQQSRLQEMLATLQPQTNAFNGFGVSPNPVKWCGTESGKPGYPLWSTGCEQQHGDPTSSTFCPTGVDTEL 969
+C +G R++V CD +A P+ V E P CT+ + W H A C + C +AAVP PT DQL + EI GLTHFNMATF DGDPAC NWN G N SNPA F P LN+SNW+ESY A+GA + VLTAKHGCGFL+FDTA+ LP G EY Y V R+ VPSFG++VA + + AGLG G+YYST NN+Y G V QLG LLPGQ+N+T E++ +VF ++ELW YG TE+WLDHG+ SQQ RLQ++LATLQP AFNG GVS NP +W GTE G P YP+WSTG Q GDPTS + P DT L
Sbjct: 148 ACPAGVRTLVVRGQCDATADARQGPDELVVENPTCTFTVSWRHKAFCSRPAESSSC-SAAVPTPTPDQLAWQRMEIGGLTHFNMATFSGVDGDPACSIFNWNVGPNTSNPATFAPTNLNISNWIESYKALGAGYGVLTAKHGCGFLLFDTASQLPARIGGGEYKYAVKRKGVPSFGQDVAALYAAAMREAGLGYGYYYSTTNNFYSGYVDSKQLGVLLPGQLNITYTEFDQLVFEQVKELWSNYGALTEVWLDHGYTGSQQKRLQDLLATLQPHAVAFNGLGVSNNPSRWVGTEDGTPPYPVWSTGTSGQ-GDPTSKVWNPAVADTTL 473
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: A0A5A8ELI6_CAFRO (Alpha-L-fucosidase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8ELI6_CAFRO) HSP 1 Score: 350 bits (897), Expect = 5.110e-111 Identity = 179/328 (54.57%), Postives = 217/328 (66.16%), Query Frame = 1
Query: 1 SCDSG-RSVVFNLVCDPSAPVSNPPNGTVEEFPRCTYNIEWYHPAACGVDKPGAQCPTAAVPVPTADQLKYITNEIMGLTHFNMATFVR-DGDPACDSTNWNTGVNCSNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLP---NGHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYLGTVHFNQLGKLLPGQVNVTMDEYNSIVFAHLQELWGQYGNFTEIWLDHGFAPSQQSRLQEMLATLQPQTNAFNGFGVSPNPVKWCGTESGKPGYPLWSTGCEQQHGDPTSSTFCPTGVDTEL 969
+C +G R++V CD +A P+ V E P CT+ + W H A C + C +AAVP PT DQL + EI GLTHFNMATF DGDPAC NWN G N SNPA F P LN+SNW+ESY A+GA + VLTAKHGCGFL+FDTA+ LP G EY Y V R+ VPSFG++VA + + AGLG G+YYST NN+Y G V QLG LLPGQ+N+T E++ +VF ++ELW YG TE+WLDHG+ SQQ RLQ++LATLQP AFNG GVS NP +W GTE G P YP+WSTG Q GDPTS + P DT L
Sbjct: 323 ACPAGVRTLVVRGQCDATADARQGPDELVVENPTCTFTVSWRHKAFCSRPAESSSC-SAAVPTPTPDQLAWQRMEIGGLTHFNMATFSGVDGDPACSIFNWNVGPNTSNPATFAPTNLNISNWIESYKALGAGYGVLTAKHGCGFLLFDTASQLPARIGGGEYKYAVKRKGVPSFGQDVAALYAAAMREAGLGYGYYYSTTNNFYSGYVDSKQLGVLLPGQLNITYTEFDQLVFEQVKELWSNYGALTEVWLDHGYTGSQQKRLQDLLATLQPHAVAFNGLGVSNNPSRWVGTEDGTPPYPVWSTGTSGQ-GDPTSKVWNPAVADTTL 648
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: A9US81_MONBE (Alpha-L-fucosidase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9US81_MONBE) HSP 1 Score: 254 bits (648), Expect = 5.450e-81 Identity = 117/203 (57.64%), Postives = 152/203 (74.88%), Query Frame = 1
Query: 247 MATFVRDGDPACDSTNWNTGVNCSNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLPNGHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYLGTVHFNQLGKLLPGQVNVTMDEYNSIVFAHLQELWGQYGNFTEIWLDHGFAPSQQSRLQEMLATLQPQTNAFNGFGVSPNPVKW 855
MATFV DGDPAC+ TNWN GV+ S+ ++F+P LN+SNWVE+Y AVGAKHAVLTAKHGCGFL+++T+TTLPNG EY + V R S PSF R+V EF TL AAGLG G+YYSTGNNY+L F ++G LPGQV++T ++YN +VF H++ELW ++G+ EIW DHG + Q +L +L QPQ FNG G+ +P+K+
Sbjct: 1 MATFVEDGDPACNPTNWNVGVHSSHASLFDPTRLNISNWVENYRAVGAKHAVLTAKHGCGFLLWNTSTTLPNGTEYPFAVARSSYPSFQRDVIAEFSSTLGAAGLGYGYYYSTGNNYFLNRDGFKRIGNPLPGQVDLTDEQYNILVFEHVKELWTRFGSLFEIWFDHGVSADQDQQLAALLKQYQPQVVGFNGQGIMTSPIKF 203
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: A0A813FQ86_POLGL (Alpha-L-fucosidase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FQ86_POLGL) HSP 1 Score: 262 bits (669), Expect = 1.350e-80 Identity = 137/275 (49.82%), Postives = 176/275 (64.00%), Query Frame = 1
Query: 169 TAAVPVPTADQLKYITNEIMGLTHFNMATFVRDGDPACDSTNWN------TGVNCSNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLPNGHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYL--GTVHFNQLGKLLPGQVNVTMDEYNSIVFAHLQELWGQYGNFTEIWLDHGFAPSQQSRLQEMLATLQPQTNAFNGFGVSPNPVKWCGTESGKPGYPLWSTGCEQQHGDPTSSTFCPTGVDTEL 969
+ +VPVPTA QL Y +EI+ L HFNMAT+ DGDPAC+ +NWN TG S+PA FNP LNVSNW ES A+GAKHAVLTAKHGCG L++ T T LP+G EY Y V + + + +V +EF +T+ AG+G GFYYS NN+YL G L+P Q NV+ +++ +I + + ELW +YG TE+W D G+ + Q ++ +L T QP AF G+GVSPNP+ W GTESG P +WSTG E GDP S FCP DT L
Sbjct: 40 SVSVPVPTASQLMYQQHEIVALIHFNMATYANDGDPACNPSNWNVVAPNATGPT-SDPATFNPASLNVSNWAESMLALGAKHAVLTAKHGCGHLLWPTETPLPDGREYTYCVGKNA-SAIKIDVLQEFSETMKQAGIGHGFYYSLTNNFYLNVGGNTVQNSSFLIPRQENVSQEQFEAIALSQITELWSRYGPLTEVWFDGGYTSNMQGKIAALLRTYQPDAVAFGGYGVSPNPLGWVGTESGSPKGEVWSTGAEGV-GDPDSPIFCPKTCDTTL 311
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: A9VEE7_MONBE (Alpha-L-fucosidase (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VEE7_MONBE) HSP 1 Score: 223 bits (567), Expect = 1.720e-69 Identity = 103/165 (62.42%), Postives = 131/165 (79.39%), Query Frame = 1
Query: 247 MATFVRDGDPACDSTNWNTGVNCSNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLPNGHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYLGTVHFNQLGKLLPGQVNVTMDEYNSIVFAHLQELWGQYGNFTEIWL 741
MATFV DGDPAC+ TNWN GV+ S+ ++F+P LN+SNWVE+Y AVGAKHAVLTAKHGCGFL+++T+TTLPNG EY + V R S PSF R+V EF TL AAGLG G+YYSTGNNY+L F ++G LPGQV++T ++YN +VF H++ELW ++G+ EIWL
Sbjct: 1 MATFVEDGDPACNPTNWNVGVHSSHASLFDPTRLNISNWVENYRAVGAKHAVLTAKHGCGFLLWNTSTTLPNGTEYPFAVARSSYPSFQRDVIAEFSSTLGAAGLGYGYYYSTGNNYFLNRDGFKRIGNPLPGQVDLTDEQYNILVFEHVKELWTRFGSLFEIWL 165
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: A0A7S1W882_ALECA (Alpha-L-fucosidase (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1W882_ALECA) HSP 1 Score: 209 bits (532), Expect = 3.940e-63 Identity = 108/223 (48.43%), Postives = 142/223 (63.68%), Query Frame = 1
Query: 178 VPVPTADQLKYITNEIMGLTHFNMATFVRDGDPACDSTNWN------TGVNCSNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLPNGHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYLGTVHFN-QLGKLLPGQVNVTMDEYNSIVFAHLQELWGQYGNFTEIWLDHGFAPSQQSRLQEMLATLQPQTNAFNG 825
+PVPT QL+Y +EI L HFNMATF +GDP C++ NWN TG S+P FNPV LN+SNW ES A+GAKHAVLTAKHGCG+L++ T T LP+G E+ Y V ++ + R+V +EF DT+ G+G G+YYS G+N++ Q LLPGQV +T +++ +I A + ELW YG TEIW D G+ S + RL EML +QP F G
Sbjct: 23 LPVPTPPQLEYQRHEISALIHFNMATFAENGDPGCNAKNWNKLAPPATGPT-SDPVTFNPVKLNISNWAESMLALGAKHAVLTAKHGCGYLLWPTKTRLPDGSEFTYCVGKER-SAIKRDVIREFSDTMRQHGIGYGYYYSLGSNFHFDVKGMKVQNSSLLPGQVRLTQEQFEAISLAQVAELWSNYGPLTEIWFDGGYQSSLKGRLVEMLRRMQPNATGFGG 243
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: X6NXY5_RETFI (Alpha-L-fucosidase n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NXY5_RETFI) HSP 1 Score: 207 bits (528), Expect = 1.840e-62 Identity = 110/232 (47.41%), Postives = 137/232 (59.05%), Query Frame = 1
Query: 178 VPVPTADQLKYITNEIMGLTHFNMATFVRDGDPACDSTNWNTGVNCSNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLPN-GHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYLGTV-HFNQLGKLLPGQVNVTMDEYNSIVFAHLQELWGQYGNFTEIWLDHGFAPSQQSRLQEMLATLQPQTNAFNGFGVSPNPVKWCGTE 867
V +PT Q+ Y TNEI+GLTHFNM T+ D DP+C+ NWN NP FNP LN+SNW SY +GAK AVLTAKHGCGF ++ T T+P+ GH Y Y V S P ++ + FVD + LG GFYYS NN+YL H Q LLPGQV VT ++ I L EL+ YG TE W D G + R+Q+++ QP FNG VS NP++W GTE
Sbjct: 17 VVIPTQYQVSYQTNEIVGLTHFNMGTYYGDSDPSCNPENWNMS---GNPLSFNPYALNISNWAVSYKNLGAKSAVLTAKHGCGFCLWPTNVTIPSTGHMYNYSVAFSSYP---HDIVRLFVDEMKKNNLGYGFYYSLTNNFYLNVDNHMVQNTTLLPGQVQVTQQQFEDIAMEQLTELFTSYGELTEFWFDGGTS-DLTPRVQQLIQKYQPNMVVFNGQNVSDNPIRWVGTE 241
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Match: A0A7S2TWL6_9EUKA (Alpha-L-fucosidase (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TWL6_9EUKA) HSP 1 Score: 206 bits (525), Expect = 3.440e-61 Identity = 100/220 (45.45%), Postives = 129/220 (58.64%), Query Frame = 1
Query: 316 SNPAVFNPVGLNVSNWVESYNAVGAKHAVLTAKHGCGFLIFDTATTLPNGHEYGYGVMRQSVPSFGRNVAKEFVDTLTAAGLGTGFYYSTGNNYYLGTVHF--NQLGKLLPGQVNVTMDEYNSIVFAHLQELWGQYGNFTEIWLDHGFAPSQQSRLQEMLATLQPQTNAFNGFGVSPNPVKWCGTESGKPGYPLWSTGCEQQHGDPTSSTFCPTGVDTEL 969
S+P+ FNPV LN + W E +++GA+HA+LTAKHGCGF ++ T P+G YGY V FGR+V EF + + +G GFYYS NN+YL H LLPGQ VT E+ + + ELW YGN TE+W D G+ +S LQ++L QP AF G GVSP+P+ W GTE+G PG LWS+G HG+P FCP DT L
Sbjct: 1 SDPSSFNPVDLNTTQWAEVMHSLGAQHAILTAKHGCGFALWPTTYKFPDGSRYGYDV----ASGFGRDVLLEFSEAMAKHNIGHGFYYSLTNNFYLDVYHHLVQNTTNLLPGQKRVTQQEFEDLALFQVSELWQNYGNLTEVWFDGGYTGDMKSSLQDLLTRFQPNAAAFGGAGVSPSPLCWVGTETGIPGGELWSSGYSTPHGNPNDPHFCPRACDTTL 216 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10676.913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10676.913.1 >prot_S-firma_F_contig10676.913.1 ID=prot_S-firma_F_contig10676.913.1|Name=mRNA_S-firma_F_contig10676.913.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=323bp SCDSGRSVVFNLVCDPSAPVSNPPNGTVEEFPRCTYNIEWYHPAACGVDKback to top mRNA from alignment at S-firma_F_contig10676:200..1402- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10676.913.1 ID=mRNA_S-firma_F_contig10676.913.1|Name=mRNA_S-firma_F_contig10676.913.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1203bp|location=Sequence derived from alignment at S-firma_F_contig10676:200..1402- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10676:200..1402- >mRNA_S-firma_F_contig10676.913.1 ID=mRNA_S-firma_F_contig10676.913.1|Name=mRNA_S-firma_F_contig10676.913.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1938bp|location=Sequence derived from alignment at S-firma_F_contig10676:200..1402- (Sphaerotrichia firma ET2_F female)back to top |