mRNA_S-firma_F_contig10662.901.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10662.901.1
Unique NamemRNA_S-firma_F_contig10662.901.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: A0A6H5KA62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA62_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.010e-16
Identity = 52/152 (34.21%), Postives = 89/152 (58.55%), Query Frame = 1
Query:  163 FNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHARGWTEDEKDTALLVLRIGGPALLAVMQKTTGLPGVS--FTRKFAGKVDFRGCASGNVDNVRRSIIANVKTVRRMFEGTTRNLWKVGTDE 612
             N++++ + + + L   K++ +     +IPGVRRVLAQALK G S  A++  LE+A  G + AR  T+D+ D A+LVLR+GGP+ L  + +   LP V+  +       + F  CAS   + +  +++AN++ V  ++ G +R L++   DE
Sbjct:    2 LNLKRQASRIGRKLQEYKKVMMFHGDIDIPGVRRVLAQALKDGKSPIAMLGTLEAAFQGRYRARAHTQDDLDLAMLVLRVGGPSQLFSLSQALCLPSVTSVYVEMKKRHMSFAPCASLKYEILEPAVMANLQAVVEVYGGRSR-LFQSQVDE 152          
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: A0A4R0RGD7_9APHY (Uncharacterized protein n=1 Tax=Steccherinum ochraceum TaxID=92696 RepID=A0A4R0RGD7_9APHY)

HSP 1 Score: 80.5 bits (197), Expect = 4.800e-14
Identity = 41/126 (32.54%), Postives = 76/126 (60.32%), Query Frame = 1
Query:   79 NNQWLTLQQMGARSAAWKAKADRLRLENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHARGWTEDEKDTALLVLRIGGPALLAVMQKTTGLPGV 456
            N++WLT +Q+ A +A+  AK    +L+   + +++  L   L+  KR  + ++  + P +++++ Q LK G    +IV++LE  + G++ ARG+T ++ D +LLVLR+GG  LL  M +   +P V
Sbjct:  218 NHKWLTHEQLCALAASQSAKLKDEKLKTLKLSRQVNSLADKLSEYKRFVMAVATNDFPRLKQLVGQCLKQGTGISSIVSQLERCIRGVYQARGYTNNDTDISLLVLRLGGRKLLYAMAQYLKIPSV 343          
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: A0A5E3X7U8_9AGAM (Uncharacterized protein n=2 Tax=Peniophora sp. CBMAI 1063 TaxID=718367 RepID=A0A5E3X7U8_9AGAM)

HSP 1 Score: 78.6 bits (192), Expect = 2.220e-13
Identity = 42/100 (42.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query:  151 RLENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHARGWTEDEKDTALLVLRIGGPALLAVMQKTTGLP 450
            +L+  NI +K+A +++ L   +R   L++  +IPG+RRV+AQA + G S  AI+ K+E+A+   + A+G++  + D ALL LR+GG  LL  MQK  GLP
Sbjct:  397 KLKCLNIGRKVASVMQRLTDYRRFVSLVASSDIPGLRRVVAQAQRSGASITAIIRKVEAALEYTYGAKGFSGTDLDLALLCLRLGGRRLLYAMQKHFGLP 496          
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: B0DLJ6_LACBS (Predicted protein n=1 Tax=Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) TaxID=486041 RepID=B0DLJ6_LACBS)

HSP 1 Score: 77.0 bits (188), Expect = 7.660e-13
Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 1
Query:   85 QWLTLQQMGARSAAWKAKADRLRLENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHAR-GWTEDEKDTALLVLRIGGPALLAVMQKTTGLPGVSFTRK 471
            ++L  +Q+       + +A+ L ++     +++  L K L   +R+ +L+SQ  I GV R+L+ AL++G + +AI  KL  A+ G +    GWTE E DTA L   IGGP LL  +QK  G P +S  RK
Sbjct:  356 KYLNARQLKNMLTMSRKRANALHIKLSLCAQQVGRLQKKLNDYQRMIMLISQNRIAGVSRILSVALRNGANEEAICMKLHCAIEGTYRPHSGWTEREFDTAFLTKAIGGPRLLYALQKAEGYPSLSTLRK 485          
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: A0A0C3ALT1_PILCF (Uncharacterized protein (Fragment) n=1 Tax=Piloderma croceum (strain F 1598) TaxID=765440 RepID=A0A0C3ALT1_PILCF)

HSP 1 Score: 71.6 bits (174), Expect = 4.890e-11
Identity = 46/128 (35.94%), Postives = 76/128 (59.38%), Query Frame = 1
Query:   67 LKTANNQWLTLQQMGARSAAWKAKADRLRLENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHARG-WTEDEKDTALLVLRIGGPALLAVMQKTTGL 447
            L  A+ ++L+ +Q+ A       K   L+ +  N +++   L   L   KRI +LLS  ++ G+RR+LA +L+ G S+Q I   LESA+SG++  RG +T+ + D + LV  +GGP LL  +Q++ GL
Sbjct:   79 LDFAHWEYLSAKQLQATLRRLSNKCRDLQTKLSNSKRRFETLGHKLNDHKRILMLLSSNDVAGLRRLLAASLRKGASAQTICGFLESAISGLYRPRGGFTQRDFDVSFLVKALGGPHLLYALQRSHGL 206          
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: A0A369JXW5_HYPMA (Uncharacterized protein n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369JXW5_HYPMA)

HSP 1 Score: 71.2 bits (173), Expect = 7.260e-11
Identity = 39/115 (33.91%), Postives = 63/115 (54.78%), Query Frame = 1
Query:  127 WKAKADRLRLENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHARGWTEDEKDTALLVLRIGGPALLAVMQKTTGLPGVSFTRK 471
            WK KA        ++ +K    L+ L    R  + +S  +IP + +++ Q LK G    AI+ K+ESA++G +HARG+ E + D AL+VLR+GG  LL  +     +P +   R+
Sbjct:  391 WKLKA-------LSLGRKCVSFLRKLGDHSRFLMAISTGDIPRLNQLVKQGLKDGAGISAIIRKVESALAGAYHARGYGETDLDIALMVLRLGGRRLLYALNHKFSVPSLRALRR 498          
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: A0A1X6MZZ5_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Postia placenta MAD-698-R-SB12 TaxID=670580 RepID=A0A1X6MZZ5_9APHY)

HSP 1 Score: 70.1 bits (170), Expect = 1.430e-10
Identity = 30/105 (28.57%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  154 LENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHARGWTEDEKDTALLVLRIGGPALLAVMQKTTGLPGVSFTR 468
            ++  N+ +     ++ L   +R T+ L+++++P +R+++ QA+KH  S + IV K+E    G++ A+G+  ++ D ALL  R+GG  L+    +  G+P +   R
Sbjct:    6 IQTLNLARNCGSFMQKLDDHQRFTMALARKDVPRLRQLIRQAIKHKTSIRKIVNKIEDCFDGVYKAKGFDTNDLDLALLAYRLGGQGLIYAFSQEIGIPSIRTLR 110          
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: A0A5M3MGQ1_CONPW (Uncharacterized protein n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MGQ1_CONPW)

HSP 1 Score: 67.8 bits (164), Expect = 1.070e-9
Identity = 38/129 (29.46%), Postives = 69/129 (53.49%), Query Frame = 1
Query:   85 QWLTLQQMGARSAAWKAKADRLRLENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHARGWTEDEKDTALLVLRIGGPALLAVMQKTTGLPGVSFTRK 471
            Q +T+ ++ AR+       D  RL   N  K+L  L + L A+K+  + ++   IP + RVL+ A + G S   ++ ++++A  G++H RG+ +++    LL LR+GG  +  +  +T   P  S  RK
Sbjct:   94 QLMTMLRLKARTI------DEGRLRQLNSAKRLINLERVLDAQKQTLMAIASNRIPAINRVLSAAFRRGSSIYQVLQQVDNAAQGVYHPRGYEDEDYLRGLLFLRLGGARVADMAHRTMDTPATSTLRK 216          
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: A0A4S4LQ01_9AGAM (Uncharacterized protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LQ01_9AGAM)

HSP 1 Score: 66.2 bits (160), Expect = 3.750e-9
Identity = 39/124 (31.45%), Postives = 74/124 (59.68%), Query Frame = 1
Query:   85 QWLTLQQMGARSAAWKAKADRLRL-----ENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHARG-WTEDEKDTALLVLRIGGPALLAVMQKT 438
            ++LT  Q+ A +    ++  +L L     ++ N+ +K++ + + +   +RIT+LLS+ +I G+RR+L   L+ G S Q ++ +LE A++GI+  RG ++  + D A L   +GGP LL  + K+
Sbjct:  285 EYLTQVQLHAHTVDLSSRLRKLTLKLSGIQHQNMNRKMSTMRRRINDHQRITILLSRNDIAGLRRLLTVVLRRGTSLQKVLNQLERAIAGIYSPRGHFSNRDLDVAFLAKALGGPRLLYALHKS 408          
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Match: A0A5M3MCL0_CONPW (Uncharacterized protein (Fragment) n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MCL0_CONPW)

HSP 1 Score: 63.9 bits (154), Expect = 2.020e-8
Identity = 31/110 (28.18%), Postives = 58/110 (52.73%), Query Frame = 1
Query:  142 DRLRLENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSSQAIVTKLESAMSGIFHARGWTEDEKDTALLVLRIGGPALLAVMQKTTGLPGVSFTRK 471
            D   L + N  +KL  L + L   K++ + +S + +P + R+LA AL+HG S   I+  +  A +G++H RG+++++     L L + G  +  +  +T   P  S  R+
Sbjct:    7 DEAHLRHLNSARKLINLERALDIRKQLMIAISSQRLPDISRILATALRHGSSVYRIIELVHQAAAGVYHPRGYSDEDLMRGHLFLSLAGKRVADIAHRTMDTPSTSTLRR 116          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10662.901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA62_9PHAE3.010e-1634.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4R0RGD7_9APHY4.800e-1432.54Uncharacterized protein n=1 Tax=Steccherinum ochra... [more]
A0A5E3X7U8_9AGAM2.220e-1342.00Uncharacterized protein n=2 Tax=Peniophora sp. CBM... [more]
B0DLJ6_LACBS7.660e-1336.15Predicted protein n=1 Tax=Laccaria bicolor (strain... [more]
A0A0C3ALT1_PILCF4.890e-1135.94Uncharacterized protein (Fragment) n=1 Tax=Piloder... [more]
A0A369JXW5_HYPMA7.260e-1133.91Uncharacterized protein n=1 Tax=Hypsizygus marmore... [more]
A0A1X6MZZ5_9APHY1.430e-1028.57Uncharacterized protein (Fragment) n=1 Tax=Postia ... [more]
A0A5M3MGQ1_CONPW1.070e-929.46Uncharacterized protein n=1 Tax=Coniophora puteana... [more]
A0A4S4LQ01_9AGAM3.750e-931.45Uncharacterized protein n=1 Tax=Bondarzewia mesent... [more]
A0A5M3MCL0_CONPW2.020e-828.18Uncharacterized protein (Fragment) n=1 Tax=Conioph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10662contigS-firma_F_contig10662:1416..2463 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7G3X4
Max annot lvl2759|Eukaryota
Evalue4.08e-19
EggNOG OGs2DMFT@1|root,2S64X@2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Model size614
Cds size612
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10662.901.1prot_S-firma_F_contig10662.901.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10662 1416..2463 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815605.745116-CDS-S-firma_F_contig10662:1415..14431622815605.745116-CDS-S-firma_F_contig10662:1415..1443Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10662 1416..1443 +
1696949449.0586586-CDS-S-firma_F_contig10662:1415..14431696949449.0586586-CDS-S-firma_F_contig10662:1415..1443Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10662 1416..1443 +
1622815605.7577066-CDS-S-firma_F_contig10662:1678..21331622815605.7577066-CDS-S-firma_F_contig10662:1678..2133Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10662 1679..2133 +
1696949449.0748787-CDS-S-firma_F_contig10662:1678..21331696949449.0748787-CDS-S-firma_F_contig10662:1678..2133Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10662 1679..2133 +
1622815605.7711716-CDS-S-firma_F_contig10662:2334..24631622815605.7711716-CDS-S-firma_F_contig10662:2334..2463Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10662 2335..2463 +
1696949449.0908508-CDS-S-firma_F_contig10662:2334..24631696949449.0908508-CDS-S-firma_F_contig10662:2334..2463Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10662 2335..2463 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10662.901.1

>prot_S-firma_F_contig10662.901.1 ID=prot_S-firma_F_contig10662.901.1|Name=mRNA_S-firma_F_contig10662.901.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=204bp
DLQYCPKVKEVLARAHGDVTEGLKTANNQWLTLQQMGARSAAWKAKADRL
RLENFNIRKKLAGLLKNLAAEKRITLLLSQENIPGVRRVLAQALKHGDSS
QAIVTKLESAMSGIFHARGWTEDEKDTALLVLRIGGPALLAVMQKTTGLP
GVSFTRKFAGKVDFRGCASGNVDNVRRSIIANVKTVRRMFEGTTRNLWKV
GTDE
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mRNA from alignment at S-firma_F_contig10662:1416..2463+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10662.901.1 ID=mRNA_S-firma_F_contig10662.901.1|Name=mRNA_S-firma_F_contig10662.901.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1048bp|location=Sequence derived from alignment at S-firma_F_contig10662:1416..2463+ (Sphaerotrichia firma ET2_F female)
GATCTGCAGTATTGCCCGAAGGTCAAAGGTTAGTCCCCCGTTCCATTCCT GTAGTCCTTGACCTGCCCTGGGCAACCACATGTTTCTGGCGAAAATTTCG TTCTGTATTAACTAGCTGAGATGTGCCGTCATGCTGTACGGGCTGACTCG ACAAATCTTGATAAATCTTCCGGCCTCGTGTGCCTTGGCCTGTTGGAGCA AGCATGCCCTGACCACTCTGGTATGCTTTTTTGCTTTTGGTCGCCAAACC GTTCTTGATGCAGAGGTATTGGCGCGTGCACACGGTGATGTGACGGAAGG GTTGAAGACCGCAAACAACCAGTGGCTCACCTTACAGCAGATGGGAGCCC GATCGGCGGCATGGAAGGCCAAGGCCGACAGGTTGCGGCTCGAAAATTTC AATATCCGAAAGAAGCTCGCGGGGCTGCTGAAGAATCTCGCCGCCGAGAA GCGCATCACGTTGCTCCTCTCCCAAGAAAACATCCCCGGGGTGCGGCGCG TGCTAGCCCAAGCGCTCAAGCACGGCGATTCTAGCCAAGCCATTGTGACG AAACTCGAGAGCGCGATGAGTGGGATCTTCCACGCGCGCGGGTGGACTGA GGACGAGAAGGACACTGCGTTACTGGTTTTGCGTATCGGCGGGCCCGCGT TACTAGCGGTGATGCAAAAAACTACAGGTCTTCCGGGCGTGTCGTTCACG AGGAAGTTTGCCGGCAAGGTACTTTTTTTTTTAATGTAAATGAAGTTGAT TGTTGAAGTTGATTGTTCCTGTTGTTCCTGTGCGAAAACTCGGGGGATTG GCCGGCATCAACCGACATGAAGCCCGCCAGTTGCTTGTTCTGGTCAATGA GTGTTGAGCAGTCGTCGGTGTCCATAACCGTTGCCATGACCGTTTGTATT CTGGTGAATGATAATGCAGGTCGACTTCCGAGGGTGTGCATCGGGGAACG TTGACAATGTCCGGCGTTCAATCATCGCTAACGTGAAGACGGTCAGGCGG ATGTTCGAGGGGACAACGCGAAACTTGTGGAAGGTTGGAACGGACGAG
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Coding sequence (CDS) from alignment at S-firma_F_contig10662:1416..2463+

>mRNA_S-firma_F_contig10662.901.1 ID=mRNA_S-firma_F_contig10662.901.1|Name=mRNA_S-firma_F_contig10662.901.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1224bp|location=Sequence derived from alignment at S-firma_F_contig10662:1416..2463+ (Sphaerotrichia firma ET2_F female)
GATCTGCAGTATTGCCCGAAGGTCAAAGGATCTGCAGTATTGCCCGAAGG
TCAAAGAGGTATTGGCGCGTGCACACGGTGATGTGACGGAAGGGTTGAAG
ACCGCAAACAACCAGTGGCTCACCTTACAGCAGATGGGAGCCCGATCGGC
GGCATGGAAGGCCAAGGCCGACAGGTTGCGGCTCGAAAATTTCAATATCC
GAAAGAAGCTCGCGGGGCTGCTGAAGAATCTCGCCGCCGAGAAGCGCATC
ACGTTGCTCCTCTCCCAAGAAAACATCCCCGGGGTGCGGCGCGTGCTAGC
CCAAGCGCTCAAGCACGGCGATTCTAGCCAAGCCATTGTGACGAAACTCG
AGAGCGCGATGAGTGGGATCTTCCACGCGCGCGGGTGGACTGAGGACGAG
AAGGACACTGCGTTACTGGTTTTGCGTATCGGCGGGCCCGCGTTACTAGC
GGTGATGCAAAAAACTACAGGTCTTCCGGGCGTGTCGTTCACGAGGAAGT
TTGCCGGCAAGAGGTATTGGCGCGTGCACACGGTGATGTGACGGAAGGGT
TGAAGACCGCAAACAACCAGTGGCTCACCTTACAGCAGATGGGAGCCCGA
TCGGCGGCATGGAAGGCCAAGGCCGACAGGTTGCGGCTCGAAAATTTCAA
TATCCGAAAGAAGCTCGCGGGGCTGCTGAAGAATCTCGCCGCCGAGAAGC
GCATCACGTTGCTCCTCTCCCAAGAAAACATCCCCGGGGTGCGGCGCGTG
CTAGCCCAAGCGCTCAAGCACGGCGATTCTAGCCAAGCCATTGTGACGAA
ACTCGAGAGCGCGATGAGTGGGATCTTCCACGCGCGCGGGTGGACTGAGG
ACGAGAAGGACACTGCGTTACTGGTTTTGCGTATCGGCGGGCCCGCGTTA
CTAGCGGTGATGCAAAAAACTACAGGTCTTCCGGGCGTGTCGTTCACGAG
GAAGTTTGCCGGCAAGGTCGACTTCCGAGGGTGTGCATCGGGGAACGTTG
ACAATGTCCGGCGTTCAATCATCGCTAACGTGAAGACGGTCAGGCGGATG
TTCGAGGGGACAACGCGAAACTTGTGGAAGGTTGGAACGGACGAGGTCGA
CTTCCGAGGGTGTGCATCGGGGAACGTTGACAATGTCCGGCGTTCAATCA
TCGCTAACGTGAAGACGGTCAGGCGGATGTTCGAGGGGACAACGCGAAAC
TTGTGGAAGGTTGGAACGGACGAG
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