mRNA_S-firma_F_contig10657.892.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10657.892.1
Unique NamemRNA_S-firma_F_contig10657.892.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: A9UYG0_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UYG0_MONBE)

HSP 1 Score: 118 bits (295), Expect = 5.970e-29
Identity = 60/134 (44.78%), Postives = 80/134 (59.70%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKG-GRMPARSLGWLYDDHDKEGAIGLGYRYHDPASPHSWKLVYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGIIANFSSWYESVYDSRVEEQN 399
            D + TIM++LDV+RPASQA W FDG SI+P+L G G    R +GW+Y +  +      GYRY        WK V N   C P +C    LYDL  D+ E  +L+  YPDV   I+AN+++W+ESV  SR EE +
Sbjct:  273 DFMATIMDVLDVQRPASQAQWAFDGQSIMPILTGEGDFDLRGIGWMYQNPSQH-----GYRYG------RWKFVNNSQGCKP-SCTQGFLYDLETDMGETTDLSSVYPDVFSAIVANYTAWFESVMVSRTEEND 394          
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: A0A7V5PF34_9BACT (DUF4976 domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V5PF34_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 9.300e-10
Identity = 41/127 (32.28%), Postives = 64/127 (50.39%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSLGWLYDDHDKEGAIGLGYRYHDPAS---PHSWKLVYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGIIANFSSWYESV 372
            D  PTI+++  +     +     DG S+VP+LKG  +P+R L W Y  +  +G         DPAS      WKL++   Y       + +LYDLN DI+E H+++ +YPD+ + +      W  SV
Sbjct:  360 DFYPTILDLAGIPLMPQEHT---DGVSLVPLLKGDTIPSRPLYWHYPHYGNQGG--------DPASMIREGHWKLIH---YWED---GSNELYDLNTDISEQHDVSGRYPDITRKMTDKLLGWLRSV 469          
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: A0A7C5MBM9_9BACT (DUF4976 domain-containing protein n=1 Tax=Candidatus Solibacter sp. TaxID=2068625 RepID=A0A7C5MBM9_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 2.300e-9
Identity = 45/128 (35.16%), Postives = 61/128 (47.66%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSLGWLYDDHDKEG-----AIGLGYRYHDPASPHSWKLVYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGIIANFSSWYES 369
            D+LPT  E+  V+        G DG S++P+LKGGR+P R L W Y  +  +G     AI LG           WKL+  + Y  P      +LY L  D AE  NL E+ P V + + A    W +S
Sbjct:  334 DLLPTFCELAGVRAR------GVDGVSLMPLLKGGRIPERPLFWHYPHYSNQGGEPGSAIRLGV----------WKLI--EFYERPRR----ELYHLGKDPAEQVNLIEREPAVARRLTARLHQWLKS 439          
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: A0A0G3EGN7_9BACT (Arylsulfatase n=1 Tax=Kiritimatiella glycovorans TaxID=1307763 RepID=A0A0G3EGN7_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 6.100e-9
Identity = 42/128 (32.81%), Postives = 60/128 (46.88%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSLGWLYDDHD--KEGAIGLGYRYHDPASPHSWKLVYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGIIANFSSWYESVYD 378
            D  PT++E+  +   A   D   DG S+VP LK G  P R   + +  H+  +    G   R  D      WKL+ N  Y +    D  QLY+L AD+ E  NLAEQYP+  + +       Y ++ D
Sbjct:  359 DYYPTLLEMCGI---AKHPDQTIDGVSLVPTLKAGTPPDREAIYCFFPHNFGERSPAGCWVRMGD------WKLIEN-FYVSDLHPDRYQLYNLEADLGETENLAEQYPERTRQMARMLKDHYRTLCD 476          
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: A0A423WSZ9_9PEZI (Sulfatase domain-containing protein n=1 Tax=Cytospora leucostoma TaxID=1230097 RepID=A0A423WSZ9_9PEZI)

HSP 1 Score: 60.5 bits (145), Expect = 5.210e-8
Identity = 40/115 (34.78%), Postives = 57/115 (49.57%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSLGWLYDD-HDKEGAIGLGYRYHDPASPHSWKLVYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGII 342
            DILPTI+++  V +P SQ    F G  +VP+   G+  A  L    D+ H  +  IG    +H       WK ++      P   +  QLYDL  D+ E H+LAEQ P +L  +I
Sbjct:  423 DILPTILDLAGVPQPGSQ----FRGREVVPIK--GKSWAPFLSGTADEVHGPDTVIGWELFFHQAIRKGKWKAIFIPKPKGP---EKWQLYDLEKDMGEIHDLAEQEPKILDELI 528          
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: UPI000363013D (sulfatase-like hydrolase/transferase n=1 Tax=Endozoicomonas elysicola TaxID=305900 RepID=UPI000363013D)

HSP 1 Score: 60.1 bits (144), Expect = 6.980e-8
Identity = 41/121 (33.88%), Postives = 59/121 (48.76%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSL-GWLYDDHDKEGAIGLGYRYHDPASPHSWKLVYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGIIANFSSW 360
            DI+PTI  ILD+K    Q    +DG +++P L G +   ++    LY   D + AI  G           WKL +ND    P T    QL+D+  D  E H+L EQ+P++ Q +   F  W
Sbjct:  351 DIMPTISGILDIKP---QGGMPYDGVNLIPYLNGEKADHQTPHSTLYWRRDNDYAIRDG----------QWKLAWNDDN-GPKTI---QLFDIEKDPGEYHDLVEQHPEIAQSLQNKFDHW 454          
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: A0A7C5PJI9_9BACT (Sulfatase domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5PJI9_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 7.030e-8
Identity = 44/134 (32.84%), Postives = 62/134 (46.27%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSLGWLYDDHDKEGAIGLGYRYHDP---------ASPHSWKLV-YNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGIIANFSSWYESV 372
            D LPT +E+  V RP        DG SIVP+L+G ++P R L W +  +  +G    G R  DP              WKL+ Y + +         +LYDL  DI E HNLA   PD ++ ++     W + V
Sbjct:  389 DFLPTFLEVAGVPRPKGLV---LDGVSIVPLLEGKKIPERPLFWHFPAY-LQGRNVKGSR--DPFFRTRPCGVVRKGKWKLIEYFEDHAL-------ELYDLERDIGERHNLAAARPDKVKELMGLMKGWRKEV 509          
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: UPI001B35B21F (arylsulfatase n=1 Tax=Cryphonectria parasitica EP155 TaxID=660469 RepID=UPI001B35B21F)

HSP 1 Score: 60.1 bits (144), Expect = 7.120e-8
Identity = 39/114 (34.21%), Postives = 55/114 (48.25%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSLGWLYDDHDKEGAIGLGYRYHDPASPHSWKLVYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGII 342
            DI+PTI+++  +  P  Q    F G  +VP+ KG       LG     H  +  IG    +H       WK V+      P   D  QLYDL+ D+ E H+LAE+ P+VL  +I
Sbjct:  432 DIMPTILDLARIPLPGPQ----FQGREVVPI-KGKSWAPLLLGEKGQVHGDDTVIGWELFFHQAIRKGKWKAVFIP---GPKGPDKWQLYDLDNDMGEIHDLAEKEPEVLDELI 537          
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: A0A3M1TTJ9_9BACT (DUF4976 domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1TTJ9_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 9.420e-8
Identity = 43/136 (31.62%), Postives = 59/136 (43.38%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSLGW-------LYDDHDKEGAIGLGYRYHDPA--SPHSWKL--VYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGIIANFSSWYESVY 375
            D  PT MEIL + +P        DG S++P+L+G  +PAR L W        Y+    +G   L +R    A  +   WKL   Y D           +LYDL  D  E HNLA   P   Q ++   S W +  +
Sbjct:  333 DFFPTFMEILGINKPGKL----LDGQSLMPLLQGDSLPARPLYWHFPIYLQAYNPQKDDGRDPL-FRTRPGAVITLGRWKLHHYYEDA--------ANELYDLQTDPGERHNLAAAMPQKTQELLNQLSRWQQQTH 455          
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Match: A0A423WCY3_9PEZI (Sulfatase domain-containing protein n=3 Tax=Valsa TaxID=83174 RepID=A0A423WCY3_9PEZI)

HSP 1 Score: 59.7 bits (143), Expect = 9.700e-8
Identity = 38/120 (31.67%), Postives = 59/120 (49.17%), Query Frame = 1
Query:    1 DILPTIMEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSLGWLYDDHDKEGAIGLGYRYHDPASPHSWKLVYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQYPDVLQGIIANFSSW 360
            DI+PT++E+  V +P  Q    F G  +VP+ KG        G     H  + +IG    +H       WK V+      P   +  QLYDL  D+ E H+LAEQ P++L  +I ++ ++
Sbjct:  434 DIMPTLLEVAGVPQPGPQ----FRGREVVPI-KGKSWALFLRGETDHVHGPDTSIGWELFFHQAIRKGKWKAVFIPKPKGP---EKWQLYDLEKDMGEIHDLAEQEPEILDELIKHWLAY 545          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10657.892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A9UYG0_MONBE5.970e-2944.78Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7V5PF34_9BACT9.300e-1032.28DUF4976 domain-containing protein n=1 Tax=Bacteroi... [more]
A0A7C5MBM9_9BACT2.300e-935.16DUF4976 domain-containing protein n=1 Tax=Candidat... [more]
A0A0G3EGN7_9BACT6.100e-932.81Arylsulfatase n=1 Tax=Kiritimatiella glycovorans T... [more]
A0A423WSZ9_9PEZI5.210e-834.78Sulfatase domain-containing protein n=1 Tax=Cytosp... [more]
UPI000363013D6.980e-833.88sulfatase-like hydrolase/transferase n=1 Tax=Endoz... [more]
A0A7C5PJI9_9BACT7.030e-832.84Sulfatase domain-containing protein (Fragment) n=1... [more]
UPI001B35B21F7.120e-834.21arylsulfatase n=1 Tax=Cryphonectria parasitica EP1... [more]
A0A3M1TTJ9_9BACT9.420e-831.62DUF4976 domain-containing protein n=1 Tax=Bacteroi... [more]
A0A423WCY3_9PEZI9.700e-831.67Sulfatase domain-containing protein n=3 Tax=Valsa ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10657contigS-firma_F_contig10657:4651..5058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog81824.XP_001745629.1
PFAMsCOesterase,Sulfatase
Max annot lvl2759|Eukaryota
KEGG rclassRC00064,RC00090,RC00162
KEGG koko:K01262,ko:K01930
KEGG ReactionR00942,R02237,R04241
KEGG Pathwayko00790,ko01100,ko01523,map00790,map01100,map01523
Evalue1.58e-27
EggNOG OGsCOG3119@1|root,KOG3867@2759|Eukaryota
EC3.4.11.9,6.3.2.17
Descriptionsulfuric ester hydrolase activity
COG categoryP
BRITEko00000,ko00001,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Exons1
Model size408
Cds size390
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815604.8209474-CDS-S-firma_F_contig10657:4650..50401622815604.8209474-CDS-S-firma_F_contig10657:4650..5040Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10657 4651..5040 -
1696949448.413469-CDS-S-firma_F_contig10657:4650..50401696949448.413469-CDS-S-firma_F_contig10657:4650..5040Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10657 4651..5040 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815604.8341477-UTR-S-firma_F_contig10657:5040..50581622815604.8341477-UTR-S-firma_F_contig10657:5040..5058Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10657 5041..5058 -
1696949448.4267664-UTR-S-firma_F_contig10657:5040..50581696949448.4267664-UTR-S-firma_F_contig10657:5040..5058Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10657 5041..5058 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10657.892.1prot_S-firma_F_contig10657.892.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10657 4651..5040 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10657.892.1

>prot_S-firma_F_contig10657.892.1 ID=prot_S-firma_F_contig10657.892.1|Name=mRNA_S-firma_F_contig10657.892.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=130bp
MEILDVKRPASQADWGFDGSSIVPVLKGGRMPARSLGWLYDDHDKEGAIG
LGYRYHDPASPHSWKLVYNDLYCAPPTCDTPQLYDLNADIAEAHNLAEQY
PDVLQGIIANFSSWYESVYDSRVEEQNITN
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mRNA from alignment at S-firma_F_contig10657:4651..5058-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10657.892.1 ID=mRNA_S-firma_F_contig10657.892.1|Name=mRNA_S-firma_F_contig10657.892.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=408bp|location=Sequence derived from alignment at S-firma_F_contig10657:4651..5058- (Sphaerotrichia firma ET2_F female)
GACATTCTGCCCACCATCATGGAGATCCTTGACGTGAAGCGGCCGGCAAG CCAGGCAGACTGGGGGTTTGACGGGTCCTCCATTGTGCCGGTGCTGAAGG GTGGCCGCATGCCGGCGCGCAGCCTTGGCTGGCTGTACGATGACCACGAC AAGGAAGGGGCCATTGGGCTTGGGTACCGGTACCACGACCCGGCGTCGCC GCACTCGTGGAAGCTTGTGTACAACGACTTGTACTGCGCGCCGCCGACGT GCGACACACCGCAGCTGTACGACTTGAACGCGGACATTGCGGAGGCGCAC AACTTGGCGGAGCAGTACCCGGACGTGCTTCAGGGCATCATTGCCAACTT TTCGTCGTGGTACGAGAGCGTGTACGATTCTCGGGTTGAAGAGCAGAACA TCACAAAC
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Coding sequence (CDS) from alignment at S-firma_F_contig10657:4651..5058-

>mRNA_S-firma_F_contig10657.892.1 ID=mRNA_S-firma_F_contig10657.892.1|Name=mRNA_S-firma_F_contig10657.892.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=780bp|location=Sequence derived from alignment at S-firma_F_contig10657:4651..5058- (Sphaerotrichia firma ET2_F female)
ATGGAGATCCTTGACGTGAAGCGGCCGGCAAGCCAGGCAGACTGGGGGTT
TGACGGGTCCTCCATTGTGCCGGTGCTGAAGGGTGGCCGCATGCCGGCGC
GCAGCCTTGGCTGGCTGTACGATGACCACGACAAGGAAGGGGCCATTGGG
CTTGGGTACCGGTACCACGACCCGGCGTCGCCGCACTCGTGGAAGCTTGT
GTACAACGACTTGTACTGCGCGCCGCCGACGTGCGACACACCGCAGCTGT
ACGACTTGAACGCGGACATTGCGGAGGCGCACAACTTGGCGGAGCAGTAC
CCGGACGTGCTTCAGGGCATCATTGCCAACTTTTCGTCGTGGTACGAGAG
CGTGTACGATTCTCGGGTTGAAGAGCAGAACATCACAAACATGGAGATCC
TTGACGTGAAGCGGCCGGCAAGCCAGGCAGACTGGGGGTTTGACGGGTCC
TCCATTGTGCCGGTGCTGAAGGGTGGCCGCATGCCGGCGCGCAGCCTTGG
CTGGCTGTACGATGACCACGACAAGGAAGGGGCCATTGGGCTTGGGTACC
GGTACCACGACCCGGCGTCGCCGCACTCGTGGAAGCTTGTGTACAACGAC
TTGTACTGCGCGCCGCCGACGTGCGACACACCGCAGCTGTACGACTTGAA
CGCGGACATTGCGGAGGCGCACAACTTGGCGGAGCAGTACCCGGACGTGC
TTCAGGGCATCATTGCCAACTTTTCGTCGTGGTACGAGAGCGTGTACGAT
TCTCGGGTTGAAGAGCAGAACATCACAAAC
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