mRNA_S-firma_F_contig10583.792.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10583.792.1
Unique NamemRNA_S-firma_F_contig10583.792.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: A0A7S1CIC5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIC5_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.240e-79
Identity = 126/263 (47.91%), Postives = 171/263 (65.02%), Query Frame = 1
Query:   40 LTLAFNFFLLPPPPQQYHIQMNTLRSLQ-LTPGVEAVVFSKDAAVKEAVDAQHLGVEVVSDFAVNPHGTPFLKSMFQHVEHHSASKMFGYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKRYNYLMPSTFSAQHEVF----------IHAMRPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWLVDHSFH--DGIDSVDISATLHAIHQTGVDGNKAGHVPRVDKDWNVRLGRNQYDHGFLSACLYETK 789
            +T+    F +P   Q+Y IQ+NTLR++  L P  E VVF+K+A ++  V    LG+EVV +FAVNPHGTP+L+SMF+HV HH+AS   GY N D+LF   LV TL+++ +A++DG L +RVL VG+R N  M + F   H             I AM  R   FQ DAEDYFII PGT  W ++P+FV+GRP YDNWLVD+++H    +  VD++ T+ A+HQTG DGNKAGH  R DK WN+ LG   +DHG  +   ++T+
Sbjct:   14 VTMFLTLFPVPRGTQKYAIQLNTLRAMHFLWPACEVVVFAKEAEIETMVAP--LGLEVVKEFAVNPHGTPYLRSMFEHVTHHAASPFVGYVNADILFNSALVTTLRAVRRAIDDGTLHERVLCVGQRTNVDMAADFVEDHPQMLSSPATLDDTIQAMAARGSLFQTDAEDYFIITPGTLRWGEMPDFVIGRPGYDNWLVDYAYHRKSEVSLVDMTKTVPAVHQTGQDGNKAGHKSRADKGWNLALGAGGFDHGHTTHANWKTR 274          
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: A0A5A8DSD7_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DSD7_CAFRO)

HSP 1 Score: 211 bits (538), Expect = 5.360e-63
Identity = 107/259 (41.31%), Postives = 152/259 (58.69%), Query Frame = 1
Query:   70 PPPPQQYHIQMNTLRSL-QLTPGVEAVVFSKDAAVKEAVDAQHLGVEVVSDFAVNPHGTPFLKSMFQHVEHHSASKMFGYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKRYNYLMPSTFSAQHEVFIHA---------MRPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWLVDHSFHDGIDSVDISATLHAIHQTGVDGNKAGHVPRVDKDWNVRLGRNQ---YDHGFLSACLYETKPKGADI 807
            P   Q+Y IQ NTL +   L   VE  VF+    ++         V   S+F  N HGTP LKSM+ H+E+ +A+  +GY N D++F D L+  L+++ + + +G L +RVLVVGKR N+ MP   +    + ++          M  R K FQ DAED+F +   + +W +I +FV+GR AYDNWLVDH+FH G+D VD++ T+HA+HQTG DGN AGH PRVD +WN  L       YDHG      +ET+  G ++
Sbjct:   91 PEGEQKYLIQRNTLIAFANLGESVEMTVFTDSPQIQALCAELAPSVVCSSNFRTNSHGTPVLKSMYLHIENATAAPFYGYVNADIIFTDALLKALRAVQRGIHEGVLHRRVLVVGKRTNFEMPFPLTMSSPMVLNRSSGPSVIDKMAARGKVFQPDAEDFFFVHRNSLDWSQIADFVIGRVAYDNWLVDHAFHQGLDRVDVTNTVHAVHQTGHDGNMAGHTPRVDSNWNKDLATKHGGGYDHGTTDHGNFETRWHGPEM 349          
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: A0A5A8D6R9_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D6R9_CAFRO)

HSP 1 Score: 206 bits (524), Expect = 5.880e-58
Identity = 110/250 (44.00%), Postives = 147/250 (58.80%), Query Frame = 1
Query:   82 QQYHIQMNTLRSLQ-LTPGVEAVVFSKDAAVKEAVDAQHLGVEVVSDFAVNPHGTPFLKSMFQHVEHHSASKMFGYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKRYNYLMPSTFSAQHEVFI---------HAMRPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWLVDHSFHDGIDSVDISATLHAIHQTGVDGNKAGHVPRVDKDWN----VRLGRNQYDHGFLSACLYETK 789
            Q+Y IQ NTL +   L P VE  VF+    V+   D     V    DF  N HGTP LKSMF  VE  + +  +GY N D+LF   L+  ++++ + ++   L  RVL+VG+R N+ MP    A   + I          AM  R + FQ DA+D+F I   +F+W KIP+FV+GR AYDNWLVDH++HD +D VDIS T++A+HQTG DGNKAGH  R+D DWN     +LG   YDHG      +ET+
Sbjct:  440 QKYMIQRNTLAAFAALGPQVEMTVFTTSEQVERLCDELGPVVTCSRDFKTNVHGTPLLKSMFLSVERRTTAPFYGYLNADILFDGVLLTAIRTVQRGIKAKILHSRVLIVGRRTNFDMPIKLDADSPLVIKSKADLPKVRAMAARGRLFQTDAQDFFFIHRDSFHWSKIPDFVIGRLAYDNWLVDHAYHDDLDRVDISRTVYAVHQTGADGNKAGHKKRMDTDWNKHLVTKLGGG-YDHGHTHHANWETR 688          
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: A0A196SFA6_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SFA6_BLAHN)

HSP 1 Score: 139 bits (351), Expect = 2.020e-35
Identity = 85/252 (33.73%), Postives = 129/252 (51.19%), Query Frame = 1
Query:   97 QMNTLRSLQLTPGVEAVVFSKDAAVKEAVDAQHLGVEVVSDFAVNPHGTPFLKSMFQHVEHHSASKMFGYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKR-----YNYLMPSTFSAQHEVFIHAMRPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWLVDH-SFHDGIDSVDISATLHAIHQTGVDGNKAGHVPRVDKDWNVRLGRNQYDHGFLSACLYETKPKGADIVVGDRRYIQ 834
            Q N + SL   P V+AVVF+ D+           G+E    +  N  GTP+ KS+   +E   +   +GY NGD++F   +   LK ++  + + KL +RVLV G+R     YN    S+   +++  I     +   F++DA DYFI    T+ W++IPN V+GRP YDN+L+   S +   D VD + ++ A+HQT  DG  AGH  R D DWN  L    Y  G  +   +   P G  +V  ++  +Q
Sbjct:  113 QRNAILSLNSLPDVKAVVFTTDSFWLRYCKKN--GLECSDVYETNYAGTPYFKSLIHRMEEMHSCYFYGYVNGDIVFHSNITAVLKGVISLIREKKLKERVLVTGRRTNIFDYNMRFISSNVEENDRNIERAATKGVLFREDALDYFIFTKTTYYWNQIPNLVIGRPLYDNYLLHIISKNRFTDLVDATPSILAVHQTDEDGVFAGHKRRQDVDWNRHLIGKHYKMGNTNFSDFRLFP-GNQLVACEKPIVQ 361          
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: A0A196SLJ2_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SLJ2_BLAHN)

HSP 1 Score: 135 bits (341), Expect = 5.260e-33
Identity = 79/228 (34.65%), Postives = 122/228 (53.51%), Query Frame = 1
Query:   79 PQQYHIQMNTLRSLQLTPGVEAVVFSKDAAVKEAVDAQHLGVEVVSDFAVNPHGTPFLKSMFQHVEHHSASKMFGYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKRYNYL--MPSTFSAQHEV---FIHAMRPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWLVDHSFHDG-IDSVDISATLHAIHQTGVDGNKAGHVPRV-DKDWNVRLGR 741
            PQ++  Q N L  L        VVF+  A  K    A+  G+ V S    N +GTP+LK+MF+    H  S+ +GY N D+L  D L+ +L++I + +++G++  R+ +VG+R N    +   FS   +    F+  M  +   + D A DY I+    F+WD +PNFV+GR  YD +LVD ++ D  I  VD++ T+H  H    DGN++G   +  D  WN  L R
Sbjct:   73 PQRFLAQENCLALLSKLDSAYVVVFTNSAVWKRI--ARRNGLFVFSSIESNQYGTPYLKAMFKFAFDHFNSEFYGYVNADILLDDTLIDSLRAISRDIKNGRVGDRLYIVGQRTNVQQELEDRFSPSQQSSSSFVVQMVLKGHRYWDSAVDYHIVTRNAFDWDSMPNFVIGRSGYDLYLVDAAYRDPQITMVDVTNTVHCAHMLSKDGNRSGIKRKTPDNVWNQELLR 298          
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: L1K3Y8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K3Y8_GUITC)

HSP 1 Score: 129 bits (324), Expect = 9.320e-32
Identity = 79/233 (33.91%), Postives = 118/233 (50.64%), Query Frame = 1
Query:  187 AQHLGVEVVSDFAVNPHGTPFLKSMFQHVEH------HSASKMFGYTNGDLLFCDELVHTLKSILKA----VEDGKLSKRVLVVGKRYNY-LMPSTFSAQHEVFIHAMRPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWLVDHSFH-DGIDSVDISATLHAIHQTGVDGNKAGHVPRVDKDWNVR---------LGRNQYDHGFLSACLYETKPKGADIVVGDR 822
            A   G+ VV  F  N  GTP    +FQHVE+       S     GY NGD++    +  TL  +++     ++ G+  + VLV+G+R+N         +  EV    +   ++ F+  A DYF    G  +W+ IP+FVVGR AYDNWLVDH+FH   +D +D +A++ A+H TG DG +AGH    D D NV          +   ++DHG      Y T+  G  +++  R
Sbjct:  100 AMGFGIRVVDKFETNSAGTPMFSYLFQHVENVDLCAVKSRFVFDGYVNGDIILTSRVHLTLTEVMRRWSGPLQSGE-RQGVLVIGRRHNVEYQGQLLGSDREV--EELVGFAEMFESYAMDYFFFSRGWMSWNDIPSFVVGRRAYDNWLVDHAFHRPAVDLIDATASIFALHLTGSDGIRAGHNKGSDNDHNVLAVNPLTMSVVSEVEWDHGTTDHAGYYTQMMGGQVLIYSR 329          
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: UPI00201F958F (uncharacterized protein LOC124138636 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F958F)

HSP 1 Score: 122 bits (306), Expect = 8.320e-29
Identity = 86/258 (33.33%), Postives = 128/258 (49.61%), Query Frame = 1
Query:   70 PPPPQQYHIQMNTLRS-LQLTPGVEAVVFSKDAAVKEAVDAQHLGVEVVSDFAVNPHGTPFLKSMFQHVEHHSASKMFGYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKRYNYLMPSTFSAQHEVFIHAM-RPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWLVDHSFHDGIDSVDISATLHAIHQTGVDGNKAGHVPRVDKDWNVRLGRN-----QYDHGFLSACLYETKPKGADIVVGDR 822
            P   ++Y ++  TL++   L P +  V FS +    +  D    G EV+    +   G P LK M+  V     SK++GY+NGD+LF D L+ TL++++ +      S  +L++G+R N L  +     +   +  + R R K F   AEDYFI    TF W  IP  V+GRPAYDNWLV +S       VD +A++ A+HQT   GN  G   R + ++N  L RN     +Y  G  S     TK     + +  R
Sbjct:   96 PSNDKKYEVRNITLKNWANLRPHIRPVFFSTNE--NDTKDIIQHGWEVLPVTKIAASGVPVLKYMYLDVIRKFKSKLYGYSNGDILFDDGLIRTLRTVVSSYFPP--SNPILIIGQRTNVLRVTADEGTNMDSLSTIARQRGKLFLTVAEDYFI-TDSTFPWGSIPGIVIGRPAYDNWLVLNSRQHNHTVVDATASILAVHQTTKAGNFEGRT-RKNSNYNAGLLRNLYKSIKYAAGATSCAPLVTKRNETGVYISQR 347          
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: A0A196SI53_BLAHN (DNA primase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SI53_BLAHN)

HSP 1 Score: 119 bits (298), Expect = 1.350e-26
Identity = 89/267 (33.33%), Postives = 124/267 (46.44%), Query Frame = 1
Query:   94 IQMNTLRSLQ-LTPGVEAVVFSKDAAVKEAVDAQHLGVEVVSDF----------AVNPHGTPFLKSMFQHVEHHSASKMFGYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKRYNYLM------PSTFSAQHEVFIHAMRPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWLVDHSF-HDGIDS-VDISATLHAIHQTGVDGNKAGHVPRVDKDWNVRLGRNQYDHGFLSACLYETKPKGADIVVGDRRYIQR 837
            IQ NTLR L    P V  VVFSK   ++ A    HL  +  S F          + NP+GTPF K M  H+E   AS  +G+ NGD                          V +VG+R NY +      P     Q + FI A+  R   FQ DAEDYFI   G+  W ++ + V+GRP YDN+LV++ + H  + S +D +  +  +HQT  DG+KAG     D++WN+RL   Q+  G      +  +   A   +  RR   R
Sbjct:   75 IQENTLRVLNSFYPFVRTVVFSK-TTIELAGVTDHLLYQ--SSFKQAPGAGMSRSTNPYGTPFFKDMMIHLERTYASPFYGFCNGD--------------------------VFIVGRRVNYDLGNIQPIPQPLD-QQDAFIEALGARGYLFQTDAEDYFIFTKGSVPWSQLQDVVIGRPGYDNYLVNYFYYHPTVASLIDSTNAVLCVHQTDKDGSKAGFRDNPDRNWNLRLIGTQWYMGRTEFAPFMLERTAASRFLLTRRQAGR 311          
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: A0A210PXG3_MIZYE (Uncharacterized protein n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PXG3_MIZYE)

HSP 1 Score: 115 bits (288), Expect = 2.920e-26
Identity = 78/245 (31.84%), Postives = 125/245 (51.02%), Query Frame = 1
Query:   58 FFLLPPPPQQYHIQMNTLRSL-QLTPGVEAVVFSKDAAVKEAVDAQHLGVEVVSDFAVNPHGTPFLKSMFQHVEHHSASKMFGYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKRYNYL-MPSTFSAQHEVFIHAMRPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWLVDHSFHDGIDSVDISATLHAIHQTGVDGNKAGHVPRVDKDWN------VRLGRNQYDHGFLS 768
            F  + P P+   +   TL++     P +  V+F+ D  +  A  ++  G  V+    V   G P LK+MFQ V  + ++  +GY NGD+L  + L   L+S+  A +     + V++ G+R N   + +     ++      + R K F   +EDYFI     F W  IP+FV+GRPAYDNWLV H+  + I  +D + T+ AIHQT   G+K GH    + ++N      ++  RN Y  GF++
Sbjct:  108 FTSVDPDPKHNEVTERTLKNWGYFLPSINLVMFTNDTRI--AKQSRDHGWSVLPVVKVGVEGLPVLKAMFQQVIQNFSTHYYGYANGDILLTETL---LESLSTARKHFNRDENVMLTGRRINVPHLTNKELVSYQYMEKVAKERGKLFVISSEDYFITTKH-FAWQNIPDFVIGRPAYDNWLVAHARCNNIKVIDTTNTILAIHQTTDKGDKTGHA-HSNANYNDELLVSIQAPRN-YVKGFIT 344          
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Match: R7TE27_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TE27_CAPTE)

HSP 1 Score: 114 bits (285), Expect = 7.360e-26
Identity = 77/205 (37.56%), Postives = 111/205 (54.15%), Query Frame = 1
Query:  181 VDAQHLGVEVVSDFAVNPHGTPFLKSMFQHVEHHSASKMFGYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKRYNYLMPS-TFSAQHEVFIHAMRPRSKPFQDDAEDYFIILPGT-FNWDKIPNFVVGRPAYDNWLVDHSFHDGIDSVDISATLHAIHQTGVDGNKAGHVPRVDKDWNVR-LGRNQYDHGFLSACLYET 786
            V+A + G  V +    NP+  PF+K MF      S S+  GY+NGD+LF   L  TL +IL +V+     + V ++G+R N L+   T   +  V + A    ++ + D A DYFI    T F +  +P+ VVGR  YDN+LV  +   G+  VD S T+ A+HQTG DGN +GH+ +  K WN+  LG   Y  G L A  + T
Sbjct:  100 VEAINYGWTVHAAPRTNPYNLPFVKDMFLDASALSQSEFVGYSNGDILFTANLRATLVAILHSVDP----REVFIIGRRKNVLLRQRTLHLEDHVQMVA-DVEAEDYLDVAIDYFIFHQETSFPFGDLPDLVVGRSRYDNFLVSKASASGMMVVDASETITALHQTGTDGNLSGHMGKGAK-WNINILGSFNYLTGSLKAATHRT 298          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10583.792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CIC5_9STRA1.240e-7947.91Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A5A8DSD7_CAFRO5.360e-6341.31Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A5A8D6R9_CAFRO5.880e-5844.00Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A196SFA6_BLAHN2.020e-3533.73Uncharacterized protein n=1 Tax=Blastocystis sp. s... [more]
A0A196SLJ2_BLAHN5.260e-3334.65Uncharacterized protein n=1 Tax=Blastocystis sp. s... [more]
L1K3Y8_GUITC9.320e-3233.91Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
UPI00201F958F8.320e-2933.33uncharacterized protein LOC124138636 n=1 Tax=Halio... [more]
A0A196SI53_BLAHN1.350e-2633.33DNA primase n=1 Tax=Blastocystis sp. subtype 1 (st... [more]
A0A210PXG3_MIZYE2.920e-2631.84Uncharacterized protein n=1 Tax=Mizuhopecten yesso... [more]
R7TE27_CAPTE7.360e-2637.56Uncharacterized protein n=1 Tax=Capitella teleta T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10583contigS-firma_F_contig10583:1168..2184 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog55529.EKX55088
Max annot lvl2759|Eukaryota
Evalue1.53e-32
EggNOG OGs2E6IA@1|root,2SD7T@2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Model size837
Cds size837
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10583.792.1prot_S-firma_F_contig10583.792.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10583 1168..2184 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815595.0965874-CDS-S-firma_F_contig10583:1167..16301622815595.0965874-CDS-S-firma_F_contig10583:1167..1630Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10583 1168..1630 +
1696949441.374125-CDS-S-firma_F_contig10583:1167..16301696949441.374125-CDS-S-firma_F_contig10583:1167..1630Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10583 1168..1630 +
1622815595.1669354-CDS-S-firma_F_contig10583:1725..17921622815595.1669354-CDS-S-firma_F_contig10583:1725..1792Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10583 1726..1792 +
1696949441.391417-CDS-S-firma_F_contig10583:1725..17921696949441.391417-CDS-S-firma_F_contig10583:1725..1792Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10583 1726..1792 +
1622815595.184512-CDS-S-firma_F_contig10583:1877..21841622815595.184512-CDS-S-firma_F_contig10583:1877..2184Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10583 1878..2184 +
1696949441.4024138-CDS-S-firma_F_contig10583:1877..21841696949441.4024138-CDS-S-firma_F_contig10583:1877..2184Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10583 1878..2184 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10583.792.1

>prot_S-firma_F_contig10583.792.1 ID=prot_S-firma_F_contig10583.792.1|Name=mRNA_S-firma_F_contig10583.792.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=279bp
MNAPRGSLKAHCFLTLAFNFFLLPPPPQQYHIQMNTLRSLQLTPGVEAVV
FSKDAAVKEAVDAQHLGVEVVSDFAVNPHGTPFLKSMFQHVEHHSASKMF
GYTNGDLLFCDELVHTLKSILKAVEDGKLSKRVLVVGKRYNYLMPSTFSA
QHEVFIHAMRPRSKPFQDDAEDYFIILPGTFNWDKIPNFVVGRPAYDNWL
VDHSFHDGIDSVDISATLHAIHQTGVDGNKAGHVPRVDKDWNVRLGRNQY
DHGFLSACLYETKPKGADIVVGDRRYIQR
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mRNA from alignment at S-firma_F_contig10583:1168..2184+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10583.792.1 ID=mRNA_S-firma_F_contig10583.792.1|Name=mRNA_S-firma_F_contig10583.792.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1017bp|location=Sequence derived from alignment at S-firma_F_contig10583:1168..2184+ (Sphaerotrichia firma ET2_F female)
ATGAACGCTCCACGGGGCTCCCTCAAGGCACACTGTTTCCTAACCCTAGC TTTTAACTTTTTCTTGCTCCCCCCCCCCCCCCAACAGTACCACATCCAAA TGAACACCCTTCGCTCCCTGCAGCTCACCCCCGGCGTGGAGGCTGTCGTG TTCTCCAAGGATGCTGCGGTGAAGGAGGCCGTGGACGCCCAACACCTGGG GGTGGAGGTTGTCTCAGACTTTGCGGTGAACCCCCACGGGACGCCCTTCC TCAAGTCCATGTTCCAGCACGTTGAGCACCACTCGGCGTCCAAAATGTTT GGGTACACCAACGGGGACCTTCTCTTCTGCGACGAGCTGGTGCACACCCT GAAGTCCATCCTGAAGGCGGTGGAGGACGGCAAGCTGTCCAAGCGAGTCC TCGTCGTCGGCAAACGGTACAACTACTTGATGCCTAGCACCTTCAGCGCG CAGCACGAGGTGTGTGGGTGGGCGTGTGTGCTCATGTGAAGGCGTGTGGT CACAGTGGCATCCCCCCGCTGAAGCTCTACATTAACACCGCTGCGGACGT GGACCGAGTCATCCACGCCATGAGGCCCCGCAGCAAGCCCTTCCAAGACG ACGCCGAAGACTATTTCATTATTCTGTGAGTGTGTGTTTGTGTTTGGGGG CCACCCCCCCCGCTCTCCCACCCCCCCCCTCCCACCCCCCCTAACCCCCC ACTGCAACAGCCCCGGCACGTTCAATTGGGACAAAATCCCAAACTTTGTC GTCGGCCGCCCGGCGTACGACAACTGGCTGGTGGACCACTCCTTCCACGA CGGCATTGACTCCGTGGACATTTCCGCCACCCTCCACGCCATCCACCAAA CCGGCGTCGACGGCAACAAAGCCGGCCACGTCCCCCGGGTGGACAAGGAC TGGAACGTGCGCCTGGGGCGCAACCAGTACGACCACGGCTTCCTCTCCGC CTGCTTGTACGAAACCAAGCCCAAAGGGGCGGACATTGTGGTGGGCGACC GGCGGTACATCCAGCGG
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Coding sequence (CDS) from alignment at S-firma_F_contig10583:1168..2184+

>mRNA_S-firma_F_contig10583.792.1 ID=mRNA_S-firma_F_contig10583.792.1|Name=mRNA_S-firma_F_contig10583.792.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1674bp|location=Sequence derived from alignment at S-firma_F_contig10583:1168..2184+ (Sphaerotrichia firma ET2_F female)
ATGAACGCTCCACGGGGCTCCCTCAAGGCACACTGTTTCCTAACCCTAGC
TTTTAACTTTTTCTTGCTCCCCCCCCCCCCCCAACAGTACCACATCCAAA
TGAACACCCTTCGCTCCCTGCAGCTCACCCCCGGCGTGGAGGCTGTCGTG
TTCTCCAAGGATGCTGCGGTGAAGGAGGCCGTGGACGCCCAACACCTGGG
GGTGGAGGTTGTCTCAGACTTTGCGGTGAACCCCCACGGGACGCCCTTCC
TCAAGTCCATGTTCCAGCACGTTGAGCACCACTCGGCGTCCAAAATGTTT
GGGTACACCAACGGGGACCTTCTCTTCTGCGACGAGCTGGTGCACACCCT
GAAGTCCATCCTGAAGGCGGTGGAGGACGGCAAGCTGTCCAAGCGAGTCC
TCGTCGTCGGCAAACGGTACAACTACTTGATGCCTAGCACCTTCAGCGCG
CAGCACGAGGTGTATGAACGCTCCACGGGGCTCCCTCAAGGCACACTGTT
TCCTAACCCTAGCTTTTAACTTTTTCTTGCTCCCCCCCCCCCCCCAACAG
TACCACATCCAAATGAACACCCTTCGCTCCCTGCAGCTCACCCCCGGCGT
GGAGGCTGTCGTGTTCTCCAAGGATGCTGCGGTGAAGGAGGCCGTGGACG
CCCAACACCTGGGGGTGGAGGTTGTCTCAGACTTTGCGGTGAACCCCCAC
GGGACGCCCTTCCTCAAGTCCATGTTCCAGCACGTTGAGCACCACTCGGC
GTCCAAAATGTTTGGGTACACCAACGGGGACCTTCTCTTCTGCGACGAGC
TGGTGCACACCCTGAAGTCCATCCTGAAGGCGGTGGAGGACGGCAAGCTG
TCCAAGCGAGTCCTCGTCGTCGGCAAACGGTACAACTACTTGATGCCTAG
CACCTTCAGCGCGCAGCACGAGGTGTTCATCCACGCCATGAGGCCCCGCA
GCAAGCCCTTCCAAGACGACGCCGAAGACTATTTCATTATTCTTCATCCA
CGCCATGAGGCCCCGCAGCAAGCCCTTCCAAGACGACGCCGAAGACTATT
TCATTATTCTCCCCGGCACGTTCAATTGGGACAAAATCCCAAACTTTGTC
GTCGGCCGCCCGGCGTACGACAACTGGCTGGTGGACCACTCCTTCCACGA
CGGCATTGACTCCGTGGACATTTCCGCCACCCTCCACGCCATCCACCAAA
CCGGCGTCGACGGCAACAAAGCCGGCCACGTCCCCCGGGTGGACAAGGAC
TGGAACGTGCGCCTGGGGCGCAACCAGTACGACCACGGCTTCCTCTCCGC
CTGCTTGTACGAAACCAAGCCCAAAGGGGCGGACATTGTGGTGGGCGACC
GGCGGTACATCCAGCGGCCCCGGCACGTTCAATTGGGACAAAATCCCAAA
CTTTGTCGTCGGCCGCCCGGCGTACGACAACTGGCTGGTGGACCACTCCT
TCCACGACGGCATTGACTCCGTGGACATTTCCGCCACCCTCCACGCCATC
CACCAAACCGGCGTCGACGGCAACAAAGCCGGCCACGTCCCCCGGGTGGA
CAAGGACTGGAACGTGCGCCTGGGGCGCAACCAGTACGACCACGGCTTCC
TCTCCGCCTGCTTGTACGAAACCAAGCCCAAAGGGGCGGACATTGTGGTG
GGCGACCGGCGGTACATCCAGCGG
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