mRNA_S-firma_F_contig10580.791.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A819Q3H1_9BILA (Hypothetical protein n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A819Q3H1_9BILA) HSP 1 Score: 181 bits (458), Expect = 1.180e-51 Identity = 101/217 (46.54%), Postives = 136/217 (62.67%), Query Frame = 2
Query: 80 SVALKNAAEPGTTMPVVGLGTGGYGTKVD--AVYPECWAEPFG---------CGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWPTSP-------AKSTQPDCNQ-GP-AFNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
S +L N+AE G +PV+GLGTG YG + YPEC +EP G CG++T A WL +AGG+RLD A+SY NQ+S+ G+ SG+ R +IF+ SK G T +G+N+T+ Q L +LQTT++DLLL+HWP KST P CN P A+N CRL+TW A LF G VR+IG +N+ I L E+++AGMPLP+VNQ+
Sbjct: 39 SFSLFNSAESGLCLPVLGLGTGFYGINNEPYGTYPECGSEPQGDPPVPPPPGCGSNTQKAVYTWLSKAGGLRLDCANSYNNQRSVARGIEQSGIDRSQIFILSKVGPTFPLGFNETIQQTLDILQELQTTWIDLLLVHWPIMQHPGQSYVPKSTDPACNTTNPLAYNEKQCRLSTWSAMLALFDLGLVRSIGVSNYNITHLQEIIDAGMPLPSVNQV 255
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A816BJW1_9BILA (Hypothetical protein n=11 Tax=Adineta steineri TaxID=433720 RepID=A0A816BJW1_9BILA) HSP 1 Score: 176 bits (446), Expect = 5.050e-50 Identity = 98/208 (47.12%), Postives = 130/208 (62.50%), Query Frame = 2
Query: 80 SVALKNAAEPGTTMPVVGLGTGGYGTK--VDAVYPECWAEPFGCGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWPTSP-------AKSTQPDCNQ-GP-AFNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
S L N+AE G MP +GLGTG YG + YPEC AEP GCG T A WL +AGG+RLD A+SY+NQ+S+ G+ S V R ++F+ SK G T +GYN+T++Q L +LQTT++DL L+HWPT KS+ P CN P +N CRL+TW A LF G VR+IG +N+ L EM++A +PLP+VNQ+
Sbjct: 33 SFPLFNSAETGLHMPALGLGTGFYGEQNVPYGTYPECGAEPPGCGPSTQKAVYTWLTKAGGLRLDCANSYYNQRSVAQGIQQSLVDRSEVFILSKVGPTFPLGYNETINQTLDILQELQTTWIDLSLVHWPTMKHPGQSDVPKSSDPACNTTNPLTYNEKDCRLSTWSAMLLLFELGIVRSIGVSNYNTTHLQEMIDARLPLPSVNQV 240
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A814QDC1_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A814QDC1_9BILA) HSP 1 Score: 172 bits (436), Expect = 2.730e-48 Identity = 94/207 (45.41%), Postives = 128/207 (61.84%), Query Frame = 2
Query: 110 GTTMPVVGLGTGGYGTKVD--AVYPECWAEPFG---------CGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWPTSP-------AKSTQPDCNQ-GP-AFNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
G +P++GLGTG YG + YPEC +EP G CG + A WL +AGG+RLD A+SY+NQ+S+ G+ SGV+R +IF+ SK G T +G+N+T+ Q L +LQTT++DLLL+HWP KST P CN P +N CRL+TW A LF G VR+IG +N+ I L E+++AGMPLP+VNQ+
Sbjct: 59 GLCLPILGLGTGFYGINNEPYGTYPECGSEPHGDPPLPPPPGCGPNAQKAVYTWLSKAGGLRLDCANSYYNQQSVARGIEQSGVNRSQIFILSKVGPTFPLGFNETIQQTLDILQELQTTWIDLLLVHWPIMQHPGQSYVPKSTDPACNTTNPLTYNEKQCRLSTWSAMLALFDLGLVRSIGVSNYNITHLQEIIDAGMPLPSVNQV 265
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A815LXX9_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A815LXX9_ADIRI) HSP 1 Score: 171 bits (434), Expect = 3.000e-48 Identity = 98/220 (44.55%), Postives = 132/220 (60.00%), Query Frame = 2
Query: 80 SVALKNAAEPGTTMPVVGLGTGGYGTKVD--AVYPECWAEPF------------GCGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWP-------TSPAKSTQPDCN-QGPA-FNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
S L NAAE MP VGLG G YG + YPEC AEP GCG++T A WL AGG RLD A+SY+N KS+ G+ SGV R +IF+ SK G T +G+NDT++Q L +LQT+++DLLL+HWP T ++ P CN P+ ++ +CRL+TW A LF G VR+IG +N+ + L E+++AGMPLP+VNQ+
Sbjct: 21 SFPLFNAAEKNLKMPAVGLGLGFYGGNNEPYGTYPECGAEPHIDSSGHINPPPPGCGSNTEKAVYTWLHNAGGRRLDCANSYYNHKSVAQGIQQSGVDRSEIFILSKVGPTFGLGFNDTINQTMIILQELQTSWIDLLLVHWPIMVHPHETYIPPTSDPLCNVSNPSTYSEKNCRLSTWSAMVTLFNRGLVRSIGVSNYNVTHLQEIIDAGMPLPSVNQV 240
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A814BZL2_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A814BZL2_9BILA) HSP 1 Score: 168 bits (426), Expect = 3.350e-46 Identity = 102/245 (41.63%), Postives = 140/245 (57.14%), Query Frame = 2
Query: 5 TSTNMMRASLVLFVCVGVALGASPPSVALKNAAEPGTTMPVVGLGTGGYGTKVD--AVYPECWAEPF------------GCGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWPTSP-------AKSTQPDCNQ-GP-AFNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
T+T +RAS L +L PS L N+AE G ++P +GLGTG YG + + +YPEC EP GCG ++ A WL +AGG RLD A+SY+N +S+ G+ S V R +IF+ SK G T +G+N+T+ Q L LQT ++DLLL+HWP KS+ P CN P +N CRL+TW A LF G R+IG AN+ I L E+++AG+PLP+VNQ+
Sbjct: 129 TNTRNIRASRRL-----KSLFTDVPSFPLFNSAEAGLSLPALGLGTGFYGMENEPYGMYPECGDEPHDDPSDPLGPPPPGCGPNSQKAVYTWLSKAGGRRLDCANSYYNHRSVARGIEQSHVDRSQIFILSKVGPTFPLGFNETIQQTLDILQQLQTGWIDLLLVHWPVMKHPGQPYVPKSSDPACNTTNPLTYNEKGCRLSTWSAMLVLFNLGLARSIGVANYDITHLQEIIDAGLPLPSVNQV 368
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A821PLZ4_9BILA (Hypothetical protein n=6 Tax=Rotaria socialis TaxID=392032 RepID=A0A821PLZ4_9BILA) HSP 1 Score: 159 bits (403), Expect = 1.770e-43 Identity = 90/220 (40.91%), Postives = 128/220 (58.18%), Query Frame = 2
Query: 80 SVALKNAAEPGTTMPVVGLGTG--GYGTKVDAVYPECWAEPF------------GCGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWPTSP-------AKSTQPDCNQ-GP-AFNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
S L N+A+ G +P +GLGTG G G + YPEC AEP GCG ++ A WL +AGG+RLD A+SY+NQ+ + G+ S V R +IF+ SK G +GYN+T+ Q L LQT+++D+LL+HWP +S+ P CN P +N CRL+TW A LF G R+IG +N+ I L E++++G+PLP+VNQ+
Sbjct: 39 SFPLFNSAQTGLCIPALGLGTGFYGMGNQAYGTYPECGAEPHNDPSGSVLPPPPGCGLNSQKAVYTWLSKAGGLRLDCANSYYNQRHVARGINQSLVDRSQIFILSKVGPIFPLGYNETIEQTLDILQQLQTSWIDMLLVHWPIMEHPGQSYIPQSSDPACNTTNPLTYNEKDCRLSTWSAMLLLFNIGLTRSIGVSNYNITHLQEIIDSGLPLPSVNQV 258
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A814L672_9BILA (Hypothetical protein n=7 Tax=Adineta steineri TaxID=433720 RepID=A0A814L672_9BILA) HSP 1 Score: 155 bits (392), Expect = 2.400e-42 Identity = 85/207 (41.06%), Postives = 120/207 (57.97%), Query Frame = 2
Query: 119 MPVVGLGTGGYGTKVD--AVYPECWAEPF------------GCGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWPTSP-------AKSTQPDCNQGP--AFNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
MP +GLG G YG + YPEC EP GCG +T A +WL + GG RLD +SY+NQKS+ G+ SGV+R +IF+ SK G +G+NDT++Q L +LQT+++DLLL+HWP KS+ P CN ++ +CRL+TW A LF G VR+IG +N+ L E+++A M LP++NQ+
Sbjct: 1 MPAIGLGLGFYGKNNEPYGTYPECGIEPHTDSSGHVIPPPPGCGLNTQKAVYIWLNKVGGRRLDCCNSYYNQKSVARGIQESGVNRSEIFILSKVGPEFGLGFNDTINQTMGILQELQTSWIDLLLVHWPVMKHPRESYIPKSSDPTCNMSNPLTYDEKNCRLSTWSAMITLFNRGIVRSIGVSNYNATHLQEIIDAKMLLPSINQV 207
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A820Y8I4_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A820Y8I4_9BILA) HSP 1 Score: 151 bits (381), Expect = 6.460e-41 Identity = 89/201 (44.28%), Postives = 115/201 (57.21%), Query Frame = 2
Query: 77 PSVALKNAAEPGTTMPVVGLGTGGYGTKVDAVYPECWAEPFGCGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWP---TSPAKSTQPDCNQGPAFNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
PSV L NA MPV+GLGTGGYG D E W G NAT WLK GG R+D +D+Y ++ + G ASGVSR +IF+TSK + GYN T+ F+ L LQT YVDLLL+HWP S + T P C QG CR+ TWQA +F +VRAIG +N++ + L+E+ N +P+VNQ+
Sbjct: 13 PSVRLMNAVHGEVLMPVIGLGTGGYGNP-DGSGGEYWGPEQG-----HNATVAWLK-MGGRRIDTSDNYISRDGIGTGWVASGVSRAEIFITSKV---DPSGYNQTLEAFSGILKSLQTDYVDLLLVHWPGQTASQSNETVPSCKQGQT-TWFECRIQTWQALETIFQQERVRAIGVSNYEANHLLEIFNLNSTIPSVNQV 202
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A817X8F9_9BILA (Hypothetical protein n=8 Tax=Rotaria TaxID=231623 RepID=A0A817X8F9_9BILA) HSP 1 Score: 151 bits (381), Expect = 9.560e-41 Identity = 89/201 (44.28%), Postives = 115/201 (57.21%), Query Frame = 2
Query: 77 PSVALKNAAEPGTTMPVVGLGTGGYGTKVDAVYPECWAEPFGCGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWP---TSPAKSTQPDCNQGPAFNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
PSV L NA MPV+GLGTGGYG D E W G NAT WLK GG R+D +D+Y ++ + G ASGVSR +IF+TSK + GYN T+ F+ L LQT YVDLLL+HWP S + T P C QG CR+ TWQA +F +VRAIG +N++ + L+E+ N +P+VNQ+
Sbjct: 30 PSVRLMNAVHGEVLMPVIGLGTGGYGNP-DGSGGEYWGPEQG-----HNATVAWLK-MGGRRIDTSDNYISRDGIGTGWVASGVSRAEIFITSKV---DPSGYNQTLEAFSGILKSLQTDYVDLLLVHWPGQTASQSNETVPSCKQGQT-TWFECRIQTWQALETIFQQERVRAIGVSNYEANHLLEIFNLNSTIPSVNQV 219
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Match: A0A819YR23_9BILA (Hypothetical protein n=3 Tax=Adineta steineri TaxID=433720 RepID=A0A819YR23_9BILA) HSP 1 Score: 149 bits (375), Expect = 3.360e-40 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 2
Query: 191 EPFGCGAHTTNATAMWLKEAGGVRLDNADSYFNQKSLQAGMAASGVSRDKIFVTSKTGNTNAMGYNDTMSQFATTLADLQTTYVDLLLIHWPTSP-------AKSTQPDCNQ-GP-AFNATSCRLTTWQAYNDLFTTGKVRAIGTANFQIDDLMEMVNAGMPLPAVNQI 670
EP GCG +T A WL +A G+RLD A+SY+NQ+S+ G+ S + R ++F+ SK G T +GYN+T++Q L +LQTT++DLLL+HWPT KS+ P CN P +N CRL+TW A LF G VR+IG +N+ I L EM++A +PLP+VNQ+
Sbjct: 1 EPSGCGPNTQKAVYTWLSKADGLRLDCANSYYNQRSVAQGIQQSLIDRSEVFILSKVGTTFPLGYNETINQTLDILQELQTTWIDLLLVHWPTMKHPGESDVPKSSDPACNTTNPLTYNEKDCRLSTWSAMLLLFELGIVRSIGVSNYNITHLQEMIDARVPLPSVNQV 169 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10580.791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10580.791.1 >prot_S-firma_F_contig10580.791.1 ID=prot_S-firma_F_contig10580.791.1|Name=mRNA_S-firma_F_contig10580.791.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=218bp MMRASLVLFVCVGVALGASPPSVALKNAAEPGTTMPVVGLGTGGYGTKVDback to top mRNA from alignment at S-firma_F_contig10580:3585..4456+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10580.791.1 ID=mRNA_S-firma_F_contig10580.791.1|Name=mRNA_S-firma_F_contig10580.791.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=872bp|location=Sequence derived from alignment at S-firma_F_contig10580:3585..4456+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10580:3585..4456+ >mRNA_S-firma_F_contig10580.791.1 ID=mRNA_S-firma_F_contig10580.791.1|Name=mRNA_S-firma_F_contig10580.791.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1308bp|location=Sequence derived from alignment at S-firma_F_contig10580:3585..4456+ (Sphaerotrichia firma ET2_F female)back to top |