mRNA_S-firma_F_contig10579.786.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: D8LQ30_ECTSI (Lactamase_B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ30_ECTSI) HSP 1 Score: 448 bits (1153), Expect = 4.780e-156 Identity = 218/263 (82.89%), Postives = 239/263 (90.87%), Query Frame = 1
Query: 1 QPLGLKFLSMPPMVEWVSACVDAHRPKPGLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKMLPG-SKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCGIFDDAEG 786
+PLGLKFL+MPPMVEWVSACVD+ PK GLIFRQLFEKESST TYIL DA+TK+A+IIDPVD TAERD++MV++MGLKPTLLLNTHVHADHITGTGKLK +LPG +KS +SE SGG+ADVK DG+KIRFGSRY+EARATPGHTAGC TFVLDDKSACFTGD LLVRGCGRTDFQGGSSETLY+SV KIFTLPNDC VYP HDY+GRHSSTVGEEK YNPRLTKPVEEFVSIM+NLNLP P +ID AVPANMVCGI D+ EG
Sbjct: 120 KPLGLKFLTMPPMVEWVSACVDSRFPKGGLIFRQLFEKESSTFTYILGDAETKQAVIIDPVDKTAERDSQMVTEMGLKPTLLLNTHVHADHITGTGKLKGLLPGGAKSGVSEASGGQADVKIHDGDKIRFGSRYLEARATPGHTAGCMTFVLDDKSACFTGDTLLVRGCGRTDFQGGSSETLYASVKGKIFTLPNDCTVYPGHDYQGRHSSTVGEEKAYNPRLTKPVEEFVSIMSNLNLPYPKQIDKAVPANMVCGICDEVEG 382
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: A0A835YKA0_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKA0_9STRA) HSP 1 Score: 322 bits (826), Expect = 3.350e-107 Identity = 154/248 (62.10%), Postives = 189/248 (76.21%), Query Frame = 1
Query: 34 PMVEWVSACVDAHRP-KPGLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKMLPGSKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCGIFD 774
P +WV+ C +A P KP LIFRQL + ESST TYILADA T++AI+IDPVD AERDAE++++MGL LNTHVHADH+ G KL+ + P +SV+S SG +ADV G+ + F R V RATPGHT GC +FVLDD+S FTGDALL+RGCGRTDFQ G+S++LY SV T++FTLPND +VYPAHDYKGR +ST+GEE+ +NPRLTK +EEF IMA LNL P RID AVPANM CG++D
Sbjct: 87 PKADWVAGCTEAAAPGKPPLIFRQLLDLESSTYTYILADAYTRDAIVIDPVDTMAERDAEIITEMGLNLLFALNTHVHADHVNGASKLRALFPQMRSVISRASGAQADVAVAPGDSVEFAGRSVVVRATPGHTDGCCSFVLDDRSMVFTGDALLIRGCGRTDFQQGNSKSLYESVHTQLFTLPNDTIVYPAHDYKGRGNSTIGEERMFNPRLTKDIEEFQRIMAGLNLAYPKRIDAAVPANMKCGLYD 334
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: A0A1S3I4I9_LINUN (persulfide dioxygenase ETHE1, mitochondrial n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I4I9_LINUN) HSP 1 Score: 313 bits (801), Expect = 7.880e-105 Identity = 150/230 (65.22%), Postives = 185/230 (80.43%), Query Frame = 1
Query: 85 GLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKMLPGSKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCGIFD 774
GLIFRQLFE SST TYILAD +TKEA+IIDPV TAERDA++V ++GL +NTHVHADH+TGTG+LKK + G KSV+S+ +G KAD+ +G+K+ FG ++EAR+TPGHT GC T+VL+DKS FTGDALL+RGCGRTDFQ GS TLY SV T+I +LP DC++YPAHDYKGR ++VGEE K+NPRLTK EEF +IM NLNL P +ID AVPANM+CG+F+
Sbjct: 2 GLIFRQLFESVSSTYTYILADEETKEAVIIDPVMETAERDAQLVEELGLTLKYAVNTHVHADHVTGTGELKKRIGGCKSVISKAAGAKADMFLNNGDKVEFGKYHLEARSTPGHTNGCMTYVLNDKSRAFTGDALLIRGCGRTDFQQGSPLTLYESVHTQILSLPQDCLLYPAHDYKGRTVTSVGEELKFNPRLTKSKEEFANIMNNLNLNYPKQIDRAVPANMMCGVFE 231
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: I2CRD5_NANGC (Ethylmalonic encephalopathy 1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD5_NANGC) HSP 1 Score: 315 bits (806), Expect = 3.310e-103 Identity = 150/258 (58.14%), Postives = 195/258 (75.58%), Query Frame = 1
Query: 10 GLKFLSMPPMVEWVSACV------DAHRPKPGLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKMLPGSKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCG 765
GL + P + +WV A + HRP+P IFRQLFE ES T TY+L D +TKEA++IDPVD+T ERD ++ ++GL + +NTH HADH+TGTG L++ + G KSV++ +G KADV +G+KI FG ++E RATPGHT GC ++V+DD+S FTGDALLVRGCGRTDFQ GS+ +L+ SV +++FTLP DC+VYPAHDYKGR SS++ EEK++NPRLTK EEFVSIM NLNLP P +IDDA+P N+VCG
Sbjct: 147 GLSCFNNPALTDWVVASLYFILMGPEHRPRP--IFRQLFEAESCTYTYLLGDPETKEALLIDPVDLTVERDVSLIEELGLTCVMGVNTHCHADHVTGTGLLRQRVQGLKSVIARAAGAKADVLLEEGQKISFGRYHLEVRATPGHTDGCVSYVMDDRSMVFTGDALLVRGCGRTDFQQGSAHSLFKSVHSRLFTLPGDCLVYPAHDYKGRMSSSIREEKQHNPRLTKSEEEFVSIMKNLNLPYPKKIDDALPKNLVCG 402
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: A0A7S1EJD8_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1EJD8_HEMAN) HSP 1 Score: 309 bits (792), Expect = 4.790e-103 Identity = 155/256 (60.55%), Postives = 181/256 (70.70%), Query Frame = 1
Query: 7 LGLKFLSMPPMVEWVSACVDAHRPKPGLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKMLPGSKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCGIFD 774
+GL F +P + + GLIFRQLFEK SST TY+LAD T+E I+IDPV TAERDA + +G+K T +NTH HADH+TGTGKLK ++PG KS +S SG KAD KF G+ GS + RATPGHT GC TFVL+D ACFTGDA+L+RGCGRTDFQ G+SE LY V +IF+LP CV+YPAHDYKG SSTVGEEK NPRLTK EFV IMANL LP PA+ID A+P NMVCGI D
Sbjct: 10 IGLGFAFLPRTSYQQTRQLTTMAATKGLIFRQLFEKTSSTYTYLLADEKTREGILIDPVVETAERDAALCKDLGVKLTYAVNTHCHADHVTGTGKLKDLIPGCKSAISTASGAKADEKFDHGKVFTIGSHKLAVRATPGHTDGCVTFVLNDGEACFTGDAVLIRGCGRTDFQAGNSEMLYDKVHEEIFSLPESCVLYPAHDYKGHTSSTVGEEKTLNPRLTKTKAEFVEIMANLGLPYPAQIDRALPLNMVCGIQD 265
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: UPI00156122A3 (persulfide dioxygenase ETHE1, mitochondrial-like n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI00156122A3) HSP 1 Score: 311 bits (796), Expect = 1.010e-102 Identity = 152/252 (60.32%), Postives = 190/252 (75.40%), Query Frame = 1
Query: 22 LSMPPMVEWVSACVDAHRPKPGLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKMLPGSKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCGIFDD 777
LS+PP ++ + GLIFRQ+FE SST TY+LAD +T+EA++IDPV ERDA++V ++GL+ NTH HADHITGTG LKK++PG +S++S+ SG KAD+ +G+ I+FG ++EARATPGHT GC TFVL+D S FTGD LL+RGCGRTDFQ GS+ TLY SV KIFTLP C+VYPAHDYKG STV EE++ NPRLTK +EEFV IM+NLNLP+P +ID AVPAN+VCGI D
Sbjct: 78 LSLPPQSTILARSYCQRTAQKGLIFRQMFEPISSTYTYLLADCETREAVLIDPVLEEVERDAKLVKELGLRLLYAANTHCHADHITGTGLLKKVVPGCRSIISKDSGAKADITIQEGDCIKFGRFHLEARATPGHTDGCMTFVLNDHSLAFTGDTLLIRGCGRTDFQQGSATTLYKSVHDKIFTLPEWCIVYPAHDYKGMTMSTVDEERRLNPRLTKSMEEFVIIMSNLNLPKPTQIDTAVPANLVCGIQGD 329
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: UPI001B7EBDDC (persulfide dioxygenase ETHE1, mitochondrial-like n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7EBDDC) HSP 1 Score: 309 bits (792), Expect = 1.270e-102 Identity = 149/231 (64.50%), Postives = 183/231 (79.22%), Query Frame = 1
Query: 85 GLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKMLPGSKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCGIFDD 777
GL+FRQ+FE SST TY+LAD +T+EA++IDPV ERDA++V+++GL+ NTH HADHITGTG LKK++PG +SV+S+ SG KAD+ +G+ I+FG ++EARATPGHT GC TFVL+D S FTGDALL+RGCGRTDFQ GS+ LY SV KIFTLP C+VYPAHDY+G STV EE++ NPRLTK +EEFVSIM+NLNLP+P ID AVPANMVCGI D
Sbjct: 64 GLLFRQMFEPISSTYTYLLADCETREAVLIDPVLEEVERDAKLVNELGLRLLYAANTHCHADHITGTGLLKKVVPGCRSVISKDSGAKADITIQEGDSIKFGRFHLEARATPGHTDGCMTFVLNDHSLAFTGDALLIRGCGRTDFQQGSATRLYKSVHEKIFTLPEWCIVYPAHDYRGMTVSTVDEERRLNPRLTKSLEEFVSIMSNLNLPKPTHIDTAVPANMVCGIQGD 294
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: A0A7S4D913_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D913_HETAK) HSP 1 Score: 306 bits (785), Expect = 2.800e-102 Identity = 153/238 (64.29%), Postives = 186/238 (78.15%), Query Frame = 1
Query: 85 GLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKM-------LPGSKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCGIFDD 777
LIFRQLFE ESST TYIL TKEAIIIDPVD+TAERDA+ + +MGL NTHVHADH+TG+GKLK++ LP +SV++EVSG +ADVK DG+ I FG+R V +TPGHT GC ++VLDD S FTGDALL+RGCGRTDFQ GS+ETLY+SV +KIFTLP+ C+VYPAHDYKGR S+VGEEK +N RLTKP+EEF IM NL LP P +ID ++PANMVCG++++
Sbjct: 6 SLIFRQLFEAESSTYTYILGCPSTKEAIIIDPVDLTAERDAQFIREMGLTLVYAANTHVHADHVTGSGKLKQIFNVAESELP-VRSVIAEVSGAQADVKVNDGDVISFGTRSVRVLSTPGHTDGCLSYVLDDNSMVFTGDALLIRGCGRTDFQQGSAETLYNSVHSKIFTLPDSCLVYPAHDYKGRTCSSVGEEKTHNLRLTKPLEEFKEIMDNLGLPYPKKIDASLPANMVCGLYEE 242
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: A0A8J6JVZ9_ELECQ (Lactamase_B domain-containing protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6JVZ9_ELECQ) HSP 1 Score: 306 bits (785), Expect = 3.810e-102 Identity = 152/233 (65.24%), Postives = 179/233 (76.82%), Query Frame = 1
Query: 79 KPGLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKMLPGSKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCGIFDD 777
K GLIFRQ+FE S T TY+LADADTKEAI+IDPV TA RDA++V ++GL T NTH HADHITGTG LKK+LPG KSV+S+ SG AD+ G+ I+FG +EARATPGHT GC T+VL+DKS FTGDALL+RGCGRTDFQ G +TLY SV ++IFTLP+ C +YPAHDY G+ +TV EEK+ NPRLTK EF IM NLNLPRP +ID AVPAN+ CGI DD
Sbjct: 22 KRGLIFRQMFEPVSCTYTYLLADADTKEAILIDPVMETANRDAKLVKELGLNMTYAANTHCHADHITGTGVLKKLLPGCKSVISKDSGAMADIHIQQGDLIKFGKYSLEARATPGHTDGCLTYVLNDKSMAFTGDALLIRGCGRTDFQQGCPKTLYKSVHSQIFTLPDSCHLYPAHDYTGQMVTTVEEEKRLNPRLTKSEAEFAKIMNNLNLPRPKQIDIAVPANLKCGIQDD 254
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Match: A0A6J2VYC0_CHACN (persulfide dioxygenase ETHE1, mitochondrial n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VYC0_CHACN) HSP 1 Score: 307 bits (787), Expect = 6.180e-102 Identity = 147/236 (62.29%), Postives = 181/236 (76.69%), Query Frame = 1
Query: 67 AHRPKPGLIFRQLFEKESSTLTYILADADTKEAIIIDPVDVTAERDAEMVSQMGLKPTLLLNTHVHADHITGTGKLKKMLPGSKSVLSEVSGGKADVKFGDGEKIRFGSRYVEARATPGHTAGCTTFVLDDKSACFTGDALLVRGCGRTDFQGGSSETLYSSVMTKIFTLPNDCVVYPAHDYKGRHSSTVGEEKKYNPRLTKPVEEFVSIMANLNLPRPARIDDAVPANMVCGIFD 774
A G+IFRQLFE SST TY+LAD +TKEA++IDPV T +RD +++ ++GLK L +NTH HADHITGTG LKK + G KS +S+ SG ADV +G+++ FG ++ R TPGHT GC T+V DD+S FTGDALL+RGCGRTDFQ G ++ LY SV KIFTLP +C+VYPAHDYKG+ STV EEKK+NPRLTK VEEFV IM NLNLP+PA+ID AVPAN+VCG+ D
Sbjct: 53 ARMESKGVIFRQLFEPVSSTYTYLLADTETKEAVLIDPVLETVDRDLKLIDELGLKLKLAVNTHCHADHITGTGLLKKKVFGLKSAISKHSGAAADVMLSEGDRVTFGKHHLTVRETPGHTDGCVTYVTDDQSMAFTGDALLIRGCGRTDFQQGCAKRLYESVHKKIFTLPGNCLVYPAHDYKGQMVSTVDEEKKFNPRLTKSVEEFVDIMKNLNLPKPAKIDIAVPANLVCGLHD 288 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10579.786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10579.786.1 >prot_S-firma_F_contig10579.786.1 ID=prot_S-firma_F_contig10579.786.1|Name=mRNA_S-firma_F_contig10579.786.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=257bp MPPMVEWVSACVDAHRPKPGLIFRQLFEKESSTLTYILADADTKEAIIIDback to top mRNA from alignment at S-firma_F_contig10579:374..4577- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10579.786.1 ID=mRNA_S-firma_F_contig10579.786.1|Name=mRNA_S-firma_F_contig10579.786.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4204bp|location=Sequence derived from alignment at S-firma_F_contig10579:374..4577- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10579:374..4577- >mRNA_S-firma_F_contig10579.786.1 ID=mRNA_S-firma_F_contig10579.786.1|Name=mRNA_S-firma_F_contig10579.786.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1542bp|location=Sequence derived from alignment at S-firma_F_contig10579:374..4577- (Sphaerotrichia firma ET2_F female)back to top |