mRNA_S-firma_F_contig10575.784.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10575.784.1
Unique NamemRNA_S-firma_F_contig10575.784.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: D7G7W4_ECTSI (Aldo/keto reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W4_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 2.310e-155
Identity = 213/254 (83.86%), Postives = 231/254 (90.94%), Query Frame = 1
Query:    1 EGDPDGGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFNSFTPGYPYRTDVDMAEFIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
            EG+ DG NRENV+LAHSLDMGVFCISP+DKGGMMYKPSKVL DACAESGITPIEFHSLWQWTQQPI HTFTVGVARPSDFDEHVAAASM+ RA+ELV+P+Q  LRGL  E+LG EW+S WWHGLPGCYDTPTGVFV HIVW+WNVVTAWGMYDFARARYATLE N  KHKPEL+D+EN++AFN FTPGYPYR D+DM E IPD+CPNK KVL ILKE HEWLCKENEAEVR+TLEQRGWL AFDLQP+VPFPER
Sbjct:  274 EGESDG-NRENVELAHSLDMGVFCISPSDKGGMMYKPSKVLADACAESGITPIEFHSLWQWTQQPIAHTFTVGVARPSDFDEHVAAASMFHRADELVLPVQKALRGLMVEKLGAEWMSNWWHGLPGCYDTPTGVFVPHIVWMWNVVTAWGMYDFARARYATLESNLKKHKPELTDEENVNAFNRFTPGYPYRPDIDMEEHIPDSCPNKAKVLEILKEIHEWLCKENEAEVRQTLEQRGWLPAFDLQPNVPFPER 526          
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A835ZFP1_9STRA (Aldo/keto reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFP1_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.070e-76
Identity = 128/251 (51.00%), Postives = 162/251 (64.54%), Query Frame = 1
Query:   19 GNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQ---PITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFNSFTPGYPYRTDVDMAEFIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
            GN   +  A   DMGVF ISPNDKGG ++KPS+VLVDAC   GITP+  ++LW W+ Q      HT  VG ARPSDFDE VAAA    RA+EL+ PI+  LR L  + LG+EWV +WW GLPG YDTPTGVFV HIVWL N+V AWGM+DFARARY  LEGN    K + +++ N+ + NS+ PG P                +K ++L +L E HEWL    EA +   LE+ GWL+++ LQP  P+PE+
Sbjct:  276 GNHAALLAAAKQDMGVFIISPNDKGGHLWKPSRVLVDACRPHGITPVALNALWLWSHQRSEAAVHTLVVGAARPSDFDEMVAAAKALPRAQELLPPIEAHLRKLMLDALGQEWVDSWWQGLPGAYDTPTGVFVPHIVWLHNLVKAWGMWDFARARYKGLEGNAKNWKADATEEANLASMNSYVPGMP-AAPXXXXXXXXXXXXHKARILEVLAEAHEWLSDAGEAVITPQLEECGWLSSYSLQPQWPWPEK 525          
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S3XR36_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR36_HETAK)

HSP 1 Score: 213 bits (542), Expect = 7.080e-59
Identity = 117/253 (46.25%), Postives = 149/253 (58.89%), Query Frame = 1
Query:   16 GGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPT-GVFVSHIVWLWNVVTAWGMYDFARARYATLEG---NWDKHKPELSDQENIDAFNS--FTPGYPYRTDVDMAEFIPDT--CPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVP 750
            GGNR  V  A + DMGVF ISP DKGG +YKPS     AC     TP+ F +LW W Q P  HT  VGVARP D DEH AAA +YDR +E+   +  +L+ +  E LG+EW+ TWW GLPG Y+  T G+ V  +VW WN++ A+GMYDF R R+AT E    +WD   P  + Q N DA  S  F PG  +  D+  A         P+  KVL IL +  +WLCKE+    ++    RGW AA+DLQ D+P
Sbjct:  224 GGNRAAVAAAQAHDMGVFIISPADKGGKLYKPSLKFSAACLPDA-TPLAFGNLWLWAQDPPCHTAVVGVARPEDLDEHYAAAMLYDRRKEISDRVAARLQKMAVEALGKEWLDTWWQGLPGPYEENTKGIAVGQMVWYWNLLQAYGMYDFCRDRFATHENVAASWD---PAKTFQANCDALYSLHFMPGNAWTGDLPQAALADALRGSPHADKVLEILCQVRDWLCKESIESQKEWRAARGWAAAYDLQADLP 472          
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S2V833_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V833_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.740e-55
Identity = 96/214 (44.86%), Postives = 134/214 (62.62%), Query Frame = 1
Query:  133 CAESGITPIEFHSLWQWTQQPITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFNSFTPGYPYR-TDVDMAEFIPDTCPNKPKVLAILKETHEWL--CKENEAEVRKTLEQRGWLAAFDLQPDVPFPERK 765
            C    +TP+++  LW W  +P  HT  VG ARP+DF++H  AA +Y++ +E+V  I+  L+  ETE LGEEWV TWW+GL G ++ PT + V++IVWLWN++ A GMYDF RARY  LE N   HK           ++++ PG+ Y        E +   CPNK KVL  L E H+WL   K+++       ++RGW+AA++LQPDVPFPERK
Sbjct:    1 CLRGNVTPLQYADLWLWNHEPAVHTLVVGAARPTDFEDHYHAAMLYEQRQEIVQAIEPLLQARETEVLGEEWVGTWWNGLFGSHN-PTKINVANIVWLWNLLKAHGMYDFCRARYQALENN---HK----------NWDTWVPGFDYDPAKASELEALLSNCPNKDKVLTCLAEAHDWLHSSKKDDPAAVAERKERGWVAAYNLQPDVPFPERK 200          
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A4D9CQ75_9STRA (Aldo_ket_red domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ75_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.590e-51
Identity = 107/266 (40.23%), Postives = 146/266 (54.89%), Query Frame = 1
Query:   19 GNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQW------TQQPITHTFTVGVARPSDFDEHVAAASMYDRAEE------LVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGN---WDKHKPELSDQENIDAFNSFTPGYPY--RTDVDMAEFIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTL-EQRGWLAAFDLQPDVPFPER 762
            GN E ++ AH  DMGVF IS  DKGGM+Y+P KVLV  C  S + P+ ++ LW W      +  P  HT  +G ARPSDFDE V A ++ D  E       L+   + ++     E  GE+W   WW GLP CY    GV V+ IVW+W +  A+G++ ++  +Y+ LE     W K K  LS QE +     +TPG PY      ++A F+P   P + ++L IL+E   W  KE        L EQ GW  A++LQPD+PFPER
Sbjct:  192 GNWEAIEAAHRHDMGVFIISAADKGGMLYRPPKVLVGLC--SPLPPLIYNMLWLWRLPIGPSGAPAVHTLVIGAARPSDFDEAVRATNLLDEIERGGSEAALMETAEKRMSQASREVWGEDWADDWWLGLPDCYQNLCGVHVAQIVWMWAITKAYGLHRYSCTQYSKLEDQVPAW-KEKGHLSVQERMATVFDWTPGLPYDPSEQEELAPFLP--APRRERLLCILREASSWFGKETSGNRGVGLQEQEGWTDAYNLQPDIPFPER 452          
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S3Y469_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y469_HETAK)

HSP 1 Score: 179 bits (453), Expect = 1.240e-48
Identity = 97/215 (45.12%), Postives = 125/215 (58.14%), Query Frame = 1
Query:   16 GGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQP--ITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEE-WVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFN-SFTPGYPYRTDVDMAEFIPDTCPNKPKVLAILK 648
            GGN E V+ A + DMGVF IS  DKGG +YKPSK    AC     TPI F+ LW W  +     HT  VG ARPSDFDE  A+  +YDR +E+   I  +LR      LG+  W+ TWW GLP  Y  P G  + H+VWLW +V AWGMYDFAR RYA +EGN  K     + +EN +A   ++ PG  +R  VD A  +  + P+  K+  +L+
Sbjct:   70 GGNLEAVRAARARDMGVFIISGADKGGKLYKPSKAFAAACMPDA-TPIAFNHLWLWAHEDPQAVHTVVVGPARPSDFDEAYASTLLYDRRKEISEKIHARLRAAADAALGDAGWMDTWWRGLPHVYAHPLGTHIPHLVWLWTLVKAWGMYDFARDRYAAIEGNGPKWDDARTPEENWEALGFNWVPGCGHRPGVDYAPHVAAS-PHADKIPGLLE 282          
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S2EQG3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EQG3_TRICV)

HSP 1 Score: 157 bits (397), Expect = 1.010e-37
Identity = 102/262 (38.93%), Postives = 146/262 (55.73%), Query Frame = 1
Query:   19 GNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPITHTFTVGVARPSDFDEHVAAASMY---DRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPT-GVFVSHIVWLWNVVTAWGMYDFARARYATLEGN-WDKHKPELSDQENIDAFNSFTPGYPYRTDVDMAEFIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPERK*SESEAKV 789
            GN   +Q A  LDMGVF ISP DKGG +Y+PS   V    +  +TP+ F +LW W +  I HT ++G+ARPSD DE + AA ++   D ++EL+   + +L     E+LG+EWV      +P      T GV V H++WL NV+TA+GMY+FA+ RY  +EG+ W+K K   S +EN   FN   PG  Y  +VD +E + +   N       L E HEWL K+      + LE++GW   ++L     +P    S +  KV
Sbjct:  361 GNLACIQRALELDMGVFNISPFDKGGKLYRPSHDTVLTIGKD-LTPMAFAALWMWKKAGI-HTASIGLARPSDLDEAMEAARLFAQKDHSDELLKATEERLTARAEEKLGKEWVEKGLINIPDMLTKSTDGVAVGHMLWLHNVLTAYGMYEFAKDRYKGMEGSSWNKKK---SWEENSKNFNPGNPGRAYDPEVDYSEALKNHY-NPELAKKKLMEVHEWLNKDVTF-TDEELEEKGWKKGYNLTVWEEYPGEVDSTAVKKV 615          
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A448ZJA4_9STRA (Aldo_ket_red domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJA4_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.010e-36
Identity = 96/265 (36.23%), Postives = 136/265 (51.32%), Query Frame = 1
Query:   16 GGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPIT------HTFTVGVARPSDFDEHVAAASMY-DRAEELVVPIQN---KLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFN---SFTPGYPYRTD--VDMAEFIPDTCPN-KPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
            GGN +NV+L    DMGVF ISP DKGG +Y PS+ L        + PI++  LW  + + I       HT T+G ARPSD DE    A ++  R +E+V  ++N   +LR  E E LGE+WV  W  GL  C           IVW +N++ A+GM D+A+ RYA  + N+     ELS +ENI        + PG     D  VD A  +PD     K +VL  +   + + C ++ A  ++      W  A+D++P   FPER
Sbjct:  320 GGNLDNVRLMKEKDMGVFIISPYDKGGRLYAPSRKLRSLTLPD-LEPIQYGPLWCMSHEHIDAEHAPIHTMTIGAARPSDLDEPFVTAYLFAKRRDEMVAKVENVAKRLRAAEVEALGEDWVQNWHKGLRNCLTMDDAYEFGQIVWCYNLIKAFGMLDYAKDRYAMFDKNYKSWDFELSTKENIKKLWIPWGYCPGLATPGDGKVDYATLLPDVPEERKARVLDAISFVYSY-CSKDSATAKELTVPEEWECAYDMRPWTAFPER 582          
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S2IEI2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IEI2_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.400e-35
Identity = 92/261 (35.25%), Postives = 133/261 (50.96%), Query Frame = 1
Query:   19 GNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPI-----THTFTVGVARPSDFDEHVAAASMYDR----AEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFN---SFTPGYPYRTDVDMAE-FIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
            GN E ++L    DMG F IS  DKGGM+Y PS+ L          PI F S + W    +      HT + G ARPSD D+   AA M         + V  +  ++R  E   LGE+WV++W  GLP    +   V   +I+WL+N++ ++GM +F +ARY ++E N  K    LS ++NI A      +TPG      +D +E F+     NK +V   L+  HE LC  +EA    T   + W +A+D++P   FPER
Sbjct:   46 GNLEIIRLLKDKDMGCFIISAYDKGGMLYMPSRKLRSLTLPD-FEPIAFGSHFLWDHSRLDSSTAVHTISCGAARPSDLDQPAVAAYMRSLKTQDVSKRVDAVLRRMRSAEIAALGEDWVNSWTQGLPNFTRSSAAVQHCNIIWLYNLIHSFGMLEFCKARYRSMENNSKKWDSALSKEDNIKALAPGWGWTPGRAITPGMDYSEDFVNVPEKNKARVAEALQFVHE-LCSTDEAAANDTRIPQNWQSAYDMRPWTAFPER 304          
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S4EQZ5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQZ5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.360e-33
Identity = 97/265 (36.60%), Postives = 138/265 (52.08%), Query Frame = 1
Query:   16 GGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPIT------HTFTVGVARPSDFDEHVAAASMY-DRAEELVVPIQN---KLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFN---SFTPGYPYRTD--VDMAEFIPDTCPN-KPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
            GGN +NV+L    DMGVF ISP DKGG +Y PSK L        + PI++  LW  + + +       HT T+G ARPSD DE    A M+  R EE++  ++N   +LR  E + LGEEWV  W  GL  C        +  IVW  N++ A+GM D+A+ RYA  + N++    +LS++EN+        + PG     D  VD A  + D     K KVL  +  T+ +  K++ A +    E   W  A+D++P   FPER
Sbjct:  322 GGNLDNVRLMKEKDMGVFIISPYDKGGRLYAPSKKLRSLTLPD-LEPIQYGPLWCMSHEYMDEENAPLHTMTIGAARPSDLDEPFVTACMFAKRREEMLGKVRNVATRLRNAEIDILGEEWVQNWHKGLRNCLTEDDAYELGQIVWCHNLIKAFGMLDYAKDRYAMFDKNFNGWDFKLSNKENVKKGLIPWGYCPGIATPNDIGVDYAALLLDVPDEQKAKVLDAIHFTYSYCSKKSTANLPIPEE---WECAYDMRPWTAFPER 582          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7W4_ECTSI2.310e-15583.86Aldo/keto reductase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835ZFP1_9STRA1.070e-7651.00Aldo/keto reductase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S3XR36_HETAK7.080e-5946.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V833_9STRA2.740e-5544.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CQ75_9STRA1.590e-5140.23Aldo_ket_red domain-containing protein n=2 Tax=Mon... [more]
A0A7S3Y469_HETAK1.240e-4845.12Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2EQG3_TRICV1.010e-3738.93Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A448ZJA4_9STRA2.010e-3636.23Aldo_ket_red domain-containing protein n=1 Tax=Pse... [more]
A0A7S2IEI2_9STRA1.400e-3535.25Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4EQZ5_9STRA1.360e-3336.60Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10575contigS-firma_F_contig10575:2..5154 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7G7W4
PFAMsAldo_ket_red
Max annot lvl2759|Eukaryota
KEGG rclassRC00066,RC00161
KEGG koko:K00064
KEGG ReactionR07675,R08926
KEGG Pathwayko00051,ko00053,ko01100,ko01110,ko01120,map00051,map00053,map01100,map01110,map01120
KEGG ModuleM00114
Evalue4.84e-151
EggNOG OGsCOG0667@1|root,KOG1576@2759|Eukaryota
EC1.1.1.122
DescriptionD-arabinose 1-dehydrogenase (NAD) activity
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons7
Model size1582
Cds size711
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.7057629-UTR-S-firma_F_contig10575:1..8151622815593.7057629-UTR-S-firma_F_contig10575:1..815Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10575 2..815 -
1696949440.5492456-UTR-S-firma_F_contig10575:1..8151696949440.5492456-UTR-S-firma_F_contig10575:1..815Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10575 2..815 -
1622815593.8224614-UTR-S-firma_F_contig10575:5097..51541622815593.8224614-UTR-S-firma_F_contig10575:5097..5154Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10575 5098..5154 -
1696949440.6809359-UTR-S-firma_F_contig10575:5097..51541696949440.6809359-UTR-S-firma_F_contig10575:5097..5154Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10575 5098..5154 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.7193222-CDS-S-firma_F_contig10575:815..9531622815593.7193222-CDS-S-firma_F_contig10575:815..953Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 816..953 -
1696949440.5689118-CDS-S-firma_F_contig10575:815..9531696949440.5689118-CDS-S-firma_F_contig10575:815..953Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 816..953 -
1622815593.7306557-CDS-S-firma_F_contig10575:1678..18351622815593.7306557-CDS-S-firma_F_contig10575:1678..1835Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 1679..1835 -
1696949440.5838914-CDS-S-firma_F_contig10575:1678..18351696949440.5838914-CDS-S-firma_F_contig10575:1678..1835Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 1679..1835 -
1622815593.7673016-CDS-S-firma_F_contig10575:2341..24171622815593.7673016-CDS-S-firma_F_contig10575:2341..2417Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 2342..2417 -
1696949440.5930803-CDS-S-firma_F_contig10575:2341..24171696949440.5930803-CDS-S-firma_F_contig10575:2341..2417Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 2342..2417 -
1622815593.7778652-CDS-S-firma_F_contig10575:2837..29201622815593.7778652-CDS-S-firma_F_contig10575:2837..2920Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 2838..2920 -
1696949440.6019356-CDS-S-firma_F_contig10575:2837..29201696949440.6019356-CDS-S-firma_F_contig10575:2837..2920Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 2838..2920 -
1622815593.7874591-CDS-S-firma_F_contig10575:3747..38511622815593.7874591-CDS-S-firma_F_contig10575:3747..3851Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 3748..3851 -
1696949440.609992-CDS-S-firma_F_contig10575:3747..38511696949440.609992-CDS-S-firma_F_contig10575:3747..3851Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 3748..3851 -
1622815593.8003495-CDS-S-firma_F_contig10575:4375..44681622815593.8003495-CDS-S-firma_F_contig10575:4375..4468Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 4376..4468 -
1696949440.6263494-CDS-S-firma_F_contig10575:4375..44681696949440.6263494-CDS-S-firma_F_contig10575:4375..4468Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 4376..4468 -
1622815593.812222-CDS-S-firma_F_contig10575:5037..50971622815593.812222-CDS-S-firma_F_contig10575:5037..5097Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 5038..5097 -
1696949440.6673722-CDS-S-firma_F_contig10575:5037..50971696949440.6673722-CDS-S-firma_F_contig10575:5037..5097Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10575 5038..5097 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10575.784.1prot_S-firma_F_contig10575.784.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10575 816..5097 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10575.784.1

>prot_S-firma_F_contig10575.784.1 ID=prot_S-firma_F_contig10575.784.1|Name=mRNA_S-firma_F_contig10575.784.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=237bp
MGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPITHT
FTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEEWVST
WWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKH
KPELSDQENIDAFNSFTPGYPYRTDVDMAEFIPDTCPNKPKVLAILKETH
EWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPERK*
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mRNA from alignment at S-firma_F_contig10575:2..5154-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10575.784.1 ID=mRNA_S-firma_F_contig10575.784.1|Name=mRNA_S-firma_F_contig10575.784.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=5153bp|location=Sequence derived from alignment at S-firma_F_contig10575:2..5154- (Sphaerotrichia firma ET2_F female)
GAGGGTGATCCTGACGGCGGAAATCGCGAGAACGTGCAGCTGGCGCACTC CTTGGACATGGGCGTCTTCTGCATTTCCCCCAACGACAAGGGCGGCATGA TGTACAAGCCTTCCAAGGTGTGCGTGCGTGCGTGTGTGCGTGTGTGTGTG TGTGTGTGTGTGTGTAATTTAAACATGTTTTCTAAATACGTCCGCCGTAT ACGCCCGTCCTGTTAATAAGTCGTTCCAGGGGGACTGACTGTTGAAACAC ACTAACCCTCCCCGTCCCAGCCAACAGCAGTGTGTTGGTACAGCAGCTGG GGGTGGTGGCATTCGCTGTTTGTCGTTGTTGCACCGACGTTTGTCGACAT GCAGCCGATGCCGTTGCTCTCCGTGTACTGTACCTTCAAACATCACCGTG ATGGTGTGATGGTACATACATGGTTCATAGGTATTAGATGGTGTCGCCGT ACGCGAACTCATTCCAACCTTGCCTTTCAACGTGAACATCAACACCACCA CCACCACCAACAACAACAACAATAACAACAACCACAGCATCAACACCAAT ATCAACATCAACAAACAACACCAACACCACCACCACCACCACCATCACCA CCACCACCACCAACAACAACAACAACAACAACAACAACTACAACAACCAC AACAACATCAACACCAACACCAACTGCATGTAACAGGTTCTGGTGGATGC CTGCGCCGAGTCCGGAATCACTCCGATCGAGTTTCACAGCCTTTGGCAGT GGACGCAGCAGCCAATCACACACACCTTCGTGAGTTTGAGGTTGAGTTTG AGTTTGAGGCTGAGGCTGAGGTAGGGTTGCAAAACCTACGTGTAGCATAT TTATTTTGCTTTTATTTTGCTTTTATTTTGCTTTATTTTGCTTTATTCCG CCAGCCATGCCATACCCTGCCTTGGCTTGACATGCCTTGACATGCCATGC CTTGCCATGCCTTGCCTTGCCTTGCCATGCCTTGCCATGCCTTGACATGC CCTGGCTTGACTTGCCTTGACATGCCAGGTGATGCCCACCGTCACTCTGT GCTATTTGTACCTGCTGATTGCTCGACCTATTCCGCGCTTCGCTGCTTCC GATTGGCATCGCTGTGCGCAACTCTGACACTGCTGTGCATGGCACTTTCT GCTGTGCAGACGATTACCTGCTGATTGATCTACCTATTCCGCGCTTCGCT GCTTCCGATTGGCACCGCTGTGCGCAACTCTGACACTGCTACTGCTGTGC ATGACACTGCTGTGCATGACGCTGCTGTGCATGACACTCTGTCTGCTGTG CAGACGGTGGGCGTGGCTAGGCCCTCCGACTTTGACGAGCACGTGGCCGC CGCTTCCATGTACGACCGCGCCGAAGAGCTGGTGGTGCCTATCCAGAACA AGCTGAGGTATAATAGACACGTTTTTAAGTAGACACGTATTTATGATTTA TGATATCATACGTAGGATCTTTTATAATAGACACGTATTTATGATGTCAT ACGTAGGATATTTTACAACAGACACGTATTTATGATATCATACGTAGGAT AGGATCTCTTTGCCTCAGCCTGGTCACATTGCATACGGTTGCGTGGTACT CTGTAATCTGTACTATCTGTACTGTGCTGTCTCTGTACTGACCGTATGTA CTGTACTGTATTTTTTCTCCTTTTTTCTTCTTTTCTTCCGCCAGCTTGCG CCCAGTGCTGTAGTTCCCGAGTTCGTCCCCGCGTCCTTCGTACAACACGC AATACGCGAAATCAAGTCAGAGGACATGCGTTGTTTGCACTGCTTGTATA GCTGCATCGCTCGTGTTCGTGAGGTGACTCGTCAATTCTCCGCTCTATTT ATTGATGTGTTGGTGTTTTTTTTTGCTGTACATTCCAAGCGTTGTCCTCG CACCCGAGGCTCTTTTTGTGGTGGTCGCTCGCTGTCCTGTGTGCGCCTCA TCAGGGTCTTAACCTTGTTTTTCGGGCGGGTAGTCTACGCAGGGTTTTTG TCTTAAGCTAACATATGGGATAAACTGTAGACACCGGTTGGGGGGGTCGG TGGTTGGGATTAAGGTTGGCATTGGGTTGGGTTAGGGGTATAGAGTTAGT AGTAAATAATTAATTTCTGCGTAGGCGGTCCGGGTAGGACGTCGAATGGA ATCAAGTCGTACCTACGCTGCGCTGCTTCGTTTTTTTTTTGCGGGCTGTT GTTGAACTGACGCTGTGCTGTCTGTGTCTGTCAGGGGTCTCGAGACGGAG AGACTTGGAGAGGAGTGGGTTTCGACTTGGTGGCATGGACTTCCGGGCTG CTACGACACCCCCACGGGTGAGCTAGACTAGCTAGTCTGTGCTGAATCCA GGGTGAGCTCGTGCGTCGTGGCACGCAGGGAGGATGCATTTGTAGCTGTA ATGTCTTGTGTTGGATGGACGCAAGCTTCCAACCACTGCCGTCGTTGTTG CTGTGGTTGTAAATTGTAAATACGTGAAAGCAAACCAACAGCATCTGCTT GCCCTCTGCTAACGCTCTGCCTACTCTCTGCCGTTTCTTCTTTCTTCCCT CTCTTCGGTCTCGTGTATCTCTACAATATGTCTTGTGCATCTTGCTTGTC TTGTCTACCTTGTCTGCCTTGTCAACCTTGCCCATCTTTCCTATCTTCTT GCCCATCAAGTGTGTTGTCAACGCTGTCTGATCACATCATGTTCGTGTCT ATGGTTGTGTCTATCTTCGTGTGTTGTGTTTGTGAAGGCGTGTTCGTGTC GCACATCGTTTGGCTGTGGAATGTGGTGACGGCCTGGGGGATGTACGACT TCGCAAGGGCCAGGTACACACGTCGCTCTTCACCTCCACCCAAACCCAAC CGCGCAGTGGGTAGAACAGCTGCATCTGCATTCCTCCGCGGCAGTTACAG ATCAAACCGCGTGCCACATACATTAAACGCGACGAGATGCCATGAAGTGC TTTCCCTGCTTAGTTCGTCGCCGCTGGTGTCAAGTCTGTAGGAGCGTGGT GCTTCACAGGTACCTACCGTAGTCGGCCAACACCAGGCATCATTTTCCCT TTCCCTACAAAAGCACCTACACTCTGTTAATAGCGTTGTCCCAAGCTGGC TGGTGCCCTCCCTGCACTACGCTGAGGGGAACCATGCGCTTTGCACATGA AACACACACCCGCCGGCAGGTGAAAGGCCTCATGCCACGACATCAAAGGC TTTTCTTTTCCTCCCAATACCCAACACCCTTTGCGTATCCTTATCCTCGG CTACTTTCTCACGACGTGTGTGTGTGTGTGTATGTGTGTGTGTATTTTGG GTGCGTGGTTTGTCGGCAGGTACGCGACCCTGGAAGGAAACTGGGACAAG CACAAACCGGAGCTGTCGGACCAAGAGAACATAGACGCGTTCAACAGCTT CACACCGGGGTACCCCTACAGGACGGACGTGGATATGGCCGAATTCATTC CCGATACCTGCCCCAACAAGCCCAAGGTACATGTGTGTGTGTGTGTGTGT GTGTGTGTTTGTGTCTGTTCTTACCATCTATTTTGGAGACAGAGAGACAG AGTCCCTCGGATCAAGGCGAGACGTGTTCTTCACTTTGCAGTGTATTCAG AGGACTACTCTTACACTTTGCGGCGTATTTGTTCGGTCCATCTGAATGAA CCAACCGGGGTCACACAGGAGGGAGCGAACACCTACTGACTGCTGTACGT ATATATTCAAGACTAGGCCACCTCTCGTCTCTGTTCTGCTGTTGAGTCAC AGAGGCAACGGAGGACTGCTGCCTACCCCACCCCACACGAGACAAAAGAC ATGAGGCATGAGAGCATAGAGGTGTTGCTTCGAGCACCAAGAAGCTGAGC GGCCACGATACTTGTGCGCCACGCACACGCCAACTGTCCACATCCCCGCC AGTCGCCGGCAGGACGGGCAGAACAAAGGGCATTCGGTGTCCCCACGTCG ACAACCGCATTTAGTTGGGTTGTATCCTCTCCAGCTTTTCCGTTTGGACA TCTCAAAAGCGCCATCTATTGTGCAGCCGATCTTGATCCCGAACGGACCA ACCCTTGATCCCAAACGGACCAACCCTTGATCCCGAACGGACCAACCCTT GATCCCGAACGGACCAACCCTTGATCCCAAATGGACCAACCCTTGATCCC GAACGGACCAACCCAAAACATCTAAATTGAGCTTTCGCGTCCTGTTTGCA GGTGCTGGCGATCCTGAAGGAGACGCACGAGTGGCTGTGCAAGGAGAACG AGGCGGAAGTGCGGAAGACGTTGGAGCAGCGCGGCTGGCTGGCAGCCTTC GACCTGCAGCCGGACGTGCCCTTCCCGGAGCGAAAGTGAAGCGAAAGTGA AGCGAAAGTGTAGCCAAAGCGTAGCCAAACGTGACGCTGAAGTGAAGCGA GAGTGAAGCGAAAGTGCAGCAAACGTGACGCCAAACGTGAAGCTGAAGAG TCACCAAACGTGGAGTGAAAGGGTAGCCAAGCCAAGCGTGCAGCCGAACG TGACGTCAAAACGTGAAGCGGAACTGTAGCCAAACGTGGAGCCAAAGTGA AGCGAAAGTGTAGCCAGGCGTGAAGCCAAAGTGAAGGCGAAAGTGTAGCC AAGCGAAGCGTGAAGCCAAGCGTGAAGCCAAACGTGAAGTCAAAAGTGAA CGCGGCGCCGTGGTCAGTTTTCTTTTCGCCCTTTGCTCTTTGGTCTTGCG TGCGAGGAGGGGGGGGTGTGCTTTAGCCTTGTGCTTGGGACGGGCATCTC AGTGCAGCACTTCCTTTTGGCTTCGTGGGCATTGGTCACCGGTGCGAGGT ATCACATCATTGGCGTCTTTTCTTGAGCGGAAAGGAGCAAGGAGAATCAG TAAAATCAGTGAACAGGGGCATCCCCCACCTTCGCTTTTGTTCTTTTGTT TCGCTTTCGACACGTGGGCTCCCTTGCTCAGCAGGATCCTGACAACGCGC GGTTCACCCATAGGCGTCACCCATTTGGGCGAGCACTAACTATTGGTTAC TGTCGCAGTGTCACGATCCCGCTGCGCAAGCGAGCCGACGCGCTTAAGTC GGGCGCTACTGCTGCTGTACCGGTGTGCGCAGCCTGGTTGTGGGTAGACT AGGCTTGCAGCAACCGTGACATCAACAAATCATGCTGACAATCGTGCGGG TGG
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Coding sequence (CDS) from alignment at S-firma_F_contig10575:2..5154-

>mRNA_S-firma_F_contig10575.784.1 ID=mRNA_S-firma_F_contig10575.784.1|Name=mRNA_S-firma_F_contig10575.784.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1422bp|location=Sequence derived from alignment at S-firma_F_contig10575:2..5154- (Sphaerotrichia firma ET2_F female)
ATGGGCGTCTTCTGCATTTCCCCCAACGACAAGGGCGGCATGATGTACAA
GCCTTCCAAGATGGGCGTCTTCTGCATTTCCCCCAACGACAAGGGCGGCA
TGATGTACAAGCCTTCCAAGGTTCTGGTGGATGCCTGCGCCGAGTCCGGA
ATCACTCCGATCGAGTTTCACAGCCTTTGGCAGTGGACGCAGCAGCCAAT
CACACACACCTTCGTTCTGGTGGATGCCTGCGCCGAGTCCGGAATCACTC
CGATCGAGTTTCACAGCCTTTGGCAGTGGACGCAGCAGCCAATCACACAC
ACCTTCACGGTGGGCGTGGCTAGGCCCTCCGACTTTGACGAGCACGTGGC
CGCCGCTTCCATGTACGACCGCGCCGAAGAGCTGGTGGTGCCTATCCAGA
ACAAGCTGAGACGGTGGGCGTGGCTAGGCCCTCCGACTTTGACGAGCACG
TGGCCGCCGCTTCCATGTACGACCGCGCCGAAGAGCTGGTGGTGCCTATC
CAGAACAAGCTGAGGGGTCTCGAGACGGAGAGACTTGGAGAGGAGTGGGT
TTCGACTTGGTGGCATGGACTTCCGGGCTGCTACGACACCCCCACGGGGG
TCTCGAGACGGAGAGACTTGGAGAGGAGTGGGTTTCGACTTGGTGGCATG
GACTTCCGGGCTGCTACGACACCCCCACGGGCGTGTTCGTGTCGCACATC
GTTTGGCTGTGGAATGTGGTGACGGCCTGGGGGATGTACGACTTCGCAAG
GGCCAGGCGTGTTCGTGTCGCACATCGTTTGGCTGTGGAATGTGGTGACG
GCCTGGGGGATGTACGACTTCGCAAGGGCCAGGTACGCGACCCTGGAAGG
AAACTGGGACAAGCACAAACCGGAGCTGTCGGACCAAGAGAACATAGACG
CGTTCAACAGCTTCACACCGGGGTACCCCTACAGGACGGACGTGGATATG
GCCGAATTCATTCCCGATACCTGCCCCAACAAGCCCAAGGTACGCGACCC
TGGAAGGAAACTGGGACAAGCACAAACCGGAGCTGTCGGACCAAGAGAAC
ATAGACGCGTTCAACAGCTTCACACCGGGGTACCCCTACAGGACGGACGT
GGATATGGCCGAATTCATTCCCGATACCTGCCCCAACAAGCCCAAGGTGC
TGGCGATCCTGAAGGAGACGCACGAGTGGCTGTGCAAGGAGAACGAGGCG
GAAGTGCGGAAGACGTTGGAGCAGCGCGGCTGGCTGGCAGCCTTCGACCT
GCAGCCGGACGTGCCCTTCCCGGAGCGAAAGTGAGTGCTGGCGATCCTGA
AGGAGACGCACGAGTGGCTGTGCAAGGAGAACGAGGCGGAAGTGCGGAAG
ACGTTGGAGCAGCGCGGCTGGCTGGCAGCCTTCGACCTGCAGCCGGACGT
GCCCTTCCCGGAGCGAAAGTGA
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