mRNA_S-firma_F_contig10575.784.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: D7G7W4_ECTSI (Aldo/keto reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W4_ECTSI) HSP 1 Score: 462 bits (1190), Expect = 2.310e-155 Identity = 213/254 (83.86%), Postives = 231/254 (90.94%), Query Frame = 1
Query: 1 EGDPDGGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFNSFTPGYPYRTDVDMAEFIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
EG+ DG NRENV+LAHSLDMGVFCISP+DKGGMMYKPSKVL DACAESGITPIEFHSLWQWTQQPI HTFTVGVARPSDFDEHVAAASM+ RA+ELV+P+Q LRGL E+LG EW+S WWHGLPGCYDTPTGVFV HIVW+WNVVTAWGMYDFARARYATLE N KHKPEL+D+EN++AFN FTPGYPYR D+DM E IPD+CPNK KVL ILKE HEWLCKENEAEVR+TLEQRGWL AFDLQP+VPFPER
Sbjct: 274 EGESDG-NRENVELAHSLDMGVFCISPSDKGGMMYKPSKVLADACAESGITPIEFHSLWQWTQQPIAHTFTVGVARPSDFDEHVAAASMFHRADELVLPVQKALRGLMVEKLGAEWMSNWWHGLPGCYDTPTGVFVPHIVWMWNVVTAWGMYDFARARYATLESNLKKHKPELTDEENVNAFNRFTPGYPYRPDIDMEEHIPDSCPNKAKVLEILKEIHEWLCKENEAEVRQTLEQRGWLPAFDLQPNVPFPER 526
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A835ZFP1_9STRA (Aldo/keto reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFP1_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.070e-76 Identity = 128/251 (51.00%), Postives = 162/251 (64.54%), Query Frame = 1
Query: 19 GNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQ---PITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFNSFTPGYPYRTDVDMAEFIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
GN + A DMGVF ISPNDKGG ++KPS+VLVDAC GITP+ ++LW W+ Q HT VG ARPSDFDE VAAA RA+EL+ PI+ LR L + LG+EWV +WW GLPG YDTPTGVFV HIVWL N+V AWGM+DFARARY LEGN K + +++ N+ + NS+ PG P +K ++L +L E HEWL EA + LE+ GWL+++ LQP P+PE+
Sbjct: 276 GNHAALLAAAKQDMGVFIISPNDKGGHLWKPSRVLVDACRPHGITPVALNALWLWSHQRSEAAVHTLVVGAARPSDFDEMVAAAKALPRAQELLPPIEAHLRKLMLDALGQEWVDSWWQGLPGAYDTPTGVFVPHIVWLHNLVKAWGMWDFARARYKGLEGNAKNWKADATEEANLASMNSYVPGMP-AAPXXXXXXXXXXXXHKARILEVLAEAHEWLSDAGEAVITPQLEECGWLSSYSLQPQWPWPEK 525
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S3XR36_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR36_HETAK) HSP 1 Score: 213 bits (542), Expect = 7.080e-59 Identity = 117/253 (46.25%), Postives = 149/253 (58.89%), Query Frame = 1
Query: 16 GGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPT-GVFVSHIVWLWNVVTAWGMYDFARARYATLEG---NWDKHKPELSDQENIDAFNS--FTPGYPYRTDVDMAEFIPDT--CPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVP 750
GGNR V A + DMGVF ISP DKGG +YKPS AC TP+ F +LW W Q P HT VGVARP D DEH AAA +YDR +E+ + +L+ + E LG+EW+ TWW GLPG Y+ T G+ V +VW WN++ A+GMYDF R R+AT E +WD P + Q N DA S F PG + D+ A P+ KVL IL + +WLCKE+ ++ RGW AA+DLQ D+P
Sbjct: 224 GGNRAAVAAAQAHDMGVFIISPADKGGKLYKPSLKFSAACLPDA-TPLAFGNLWLWAQDPPCHTAVVGVARPEDLDEHYAAAMLYDRRKEISDRVAARLQKMAVEALGKEWLDTWWQGLPGPYEENTKGIAVGQMVWYWNLLQAYGMYDFCRDRFATHENVAASWD---PAKTFQANCDALYSLHFMPGNAWTGDLPQAALADALRGSPHADKVLEILCQVRDWLCKESIESQKEWRAARGWAAAYDLQADLP 472
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S2V833_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V833_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.740e-55 Identity = 96/214 (44.86%), Postives = 134/214 (62.62%), Query Frame = 1
Query: 133 CAESGITPIEFHSLWQWTQQPITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFNSFTPGYPYR-TDVDMAEFIPDTCPNKPKVLAILKETHEWL--CKENEAEVRKTLEQRGWLAAFDLQPDVPFPERK 765
C +TP+++ LW W +P HT VG ARP+DF++H AA +Y++ +E+V I+ L+ ETE LGEEWV TWW+GL G ++ PT + V++IVWLWN++ A GMYDF RARY LE N HK ++++ PG+ Y E + CPNK KVL L E H+WL K+++ ++RGW+AA++LQPDVPFPERK
Sbjct: 1 CLRGNVTPLQYADLWLWNHEPAVHTLVVGAARPTDFEDHYHAAMLYEQRQEIVQAIEPLLQARETEVLGEEWVGTWWNGLFGSHN-PTKINVANIVWLWNLLKAHGMYDFCRARYQALENN---HK----------NWDTWVPGFDYDPAKASELEALLSNCPNKDKVLTCLAEAHDWLHSSKKDDPAAVAERKERGWVAAYNLQPDVPFPERK 200
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A4D9CQ75_9STRA (Aldo_ket_red domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQ75_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.590e-51 Identity = 107/266 (40.23%), Postives = 146/266 (54.89%), Query Frame = 1
Query: 19 GNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQW------TQQPITHTFTVGVARPSDFDEHVAAASMYDRAEE------LVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGN---WDKHKPELSDQENIDAFNSFTPGYPY--RTDVDMAEFIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTL-EQRGWLAAFDLQPDVPFPER 762
GN E ++ AH DMGVF IS DKGGM+Y+P KVLV C S + P+ ++ LW W + P HT +G ARPSDFDE V A ++ D E L+ + ++ E GE+W WW GLP CY GV V+ IVW+W + A+G++ ++ +Y+ LE W K K LS QE + +TPG PY ++A F+P P + ++L IL+E W KE L EQ GW A++LQPD+PFPER
Sbjct: 192 GNWEAIEAAHRHDMGVFIISAADKGGMLYRPPKVLVGLC--SPLPPLIYNMLWLWRLPIGPSGAPAVHTLVIGAARPSDFDEAVRATNLLDEIERGGSEAALMETAEKRMSQASREVWGEDWADDWWLGLPDCYQNLCGVHVAQIVWMWAITKAYGLHRYSCTQYSKLEDQVPAW-KEKGHLSVQERMATVFDWTPGLPYDPSEQEELAPFLP--APRRERLLCILREASSWFGKETSGNRGVGLQEQEGWTDAYNLQPDIPFPER 452
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S3Y469_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y469_HETAK) HSP 1 Score: 179 bits (453), Expect = 1.240e-48 Identity = 97/215 (45.12%), Postives = 125/215 (58.14%), Query Frame = 1
Query: 16 GGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQP--ITHTFTVGVARPSDFDEHVAAASMYDRAEELVVPIQNKLRGLETERLGEE-WVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFN-SFTPGYPYRTDVDMAEFIPDTCPNKPKVLAILK 648
GGN E V+ A + DMGVF IS DKGG +YKPSK AC TPI F+ LW W + HT VG ARPSDFDE A+ +YDR +E+ I +LR LG+ W+ TWW GLP Y P G + H+VWLW +V AWGMYDFAR RYA +EGN K + +EN +A ++ PG +R VD A + + P+ K+ +L+
Sbjct: 70 GGNLEAVRAARARDMGVFIISGADKGGKLYKPSKAFAAACMPDA-TPIAFNHLWLWAHEDPQAVHTVVVGPARPSDFDEAYASTLLYDRRKEISEKIHARLRAAADAALGDAGWMDTWWRGLPHVYAHPLGTHIPHLVWLWTLVKAWGMYDFARDRYAAIEGNGPKWDDARTPEENWEALGFNWVPGCGHRPGVDYAPHVAAS-PHADKIPGLLE 282
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S2EQG3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EQG3_TRICV) HSP 1 Score: 157 bits (397), Expect = 1.010e-37 Identity = 102/262 (38.93%), Postives = 146/262 (55.73%), Query Frame = 1
Query: 19 GNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPITHTFTVGVARPSDFDEHVAAASMY---DRAEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPT-GVFVSHIVWLWNVVTAWGMYDFARARYATLEGN-WDKHKPELSDQENIDAFNSFTPGYPYRTDVDMAEFIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPERK*SESEAKV 789
GN +Q A LDMGVF ISP DKGG +Y+PS V + +TP+ F +LW W + I HT ++G+ARPSD DE + AA ++ D ++EL+ + +L E+LG+EWV +P T GV V H++WL NV+TA+GMY+FA+ RY +EG+ W+K K S +EN FN PG Y +VD +E + + N L E HEWL K+ + LE++GW ++L +P S + KV
Sbjct: 361 GNLACIQRALELDMGVFNISPFDKGGKLYRPSHDTVLTIGKD-LTPMAFAALWMWKKAGI-HTASIGLARPSDLDEAMEAARLFAQKDHSDELLKATEERLTARAEEKLGKEWVEKGLINIPDMLTKSTDGVAVGHMLWLHNVLTAYGMYEFAKDRYKGMEGSSWNKKK---SWEENSKNFNPGNPGRAYDPEVDYSEALKNHY-NPELAKKKLMEVHEWLNKDVTF-TDEELEEKGWKKGYNLTVWEEYPGEVDSTAVKKV 615
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A448ZJA4_9STRA (Aldo_ket_red domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJA4_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.010e-36 Identity = 96/265 (36.23%), Postives = 136/265 (51.32%), Query Frame = 1
Query: 16 GGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPIT------HTFTVGVARPSDFDEHVAAASMY-DRAEELVVPIQN---KLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFN---SFTPGYPYRTD--VDMAEFIPDTCPN-KPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
GGN +NV+L DMGVF ISP DKGG +Y PS+ L + PI++ LW + + I HT T+G ARPSD DE A ++ R +E+V ++N +LR E E LGE+WV W GL C IVW +N++ A+GM D+A+ RYA + N+ ELS +ENI + PG D VD A +PD K +VL + + + C ++ A ++ W A+D++P FPER
Sbjct: 320 GGNLDNVRLMKEKDMGVFIISPYDKGGRLYAPSRKLRSLTLPD-LEPIQYGPLWCMSHEHIDAEHAPIHTMTIGAARPSDLDEPFVTAYLFAKRRDEMVAKVENVAKRLRAAEVEALGEDWVQNWHKGLRNCLTMDDAYEFGQIVWCYNLIKAFGMLDYAKDRYAMFDKNYKSWDFELSTKENIKKLWIPWGYCPGLATPGDGKVDYATLLPDVPEERKARVLDAISFVYSY-CSKDSATAKELTVPEEWECAYDMRPWTAFPER 582
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S2IEI2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IEI2_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.400e-35 Identity = 92/261 (35.25%), Postives = 133/261 (50.96%), Query Frame = 1
Query: 19 GNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPI-----THTFTVGVARPSDFDEHVAAASMYDR----AEELVVPIQNKLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFN---SFTPGYPYRTDVDMAE-FIPDTCPNKPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
GN E ++L DMG F IS DKGGM+Y PS+ L PI F S + W + HT + G ARPSD D+ AA M + V + ++R E LGE+WV++W GLP + V +I+WL+N++ ++GM +F +ARY ++E N K LS ++NI A +TPG +D +E F+ NK +V L+ HE LC +EA T + W +A+D++P FPER
Sbjct: 46 GNLEIIRLLKDKDMGCFIISAYDKGGMLYMPSRKLRSLTLPD-FEPIAFGSHFLWDHSRLDSSTAVHTISCGAARPSDLDQPAVAAYMRSLKTQDVSKRVDAVLRRMRSAEIAALGEDWVNSWTQGLPNFTRSSAAVQHCNIIWLYNLIHSFGMLEFCKARYRSMENNSKKWDSALSKEDNIKALAPGWGWTPGRAITPGMDYSEDFVNVPEKNKARVAEALQFVHE-LCSTDEAAANDTRIPQNWQSAYDMRPWTAFPER 304
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Match: A0A7S4EQZ5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQZ5_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.360e-33 Identity = 97/265 (36.60%), Postives = 138/265 (52.08%), Query Frame = 1
Query: 16 GGNRENVQLAHSLDMGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPIT------HTFTVGVARPSDFDEHVAAASMY-DRAEELVVPIQN---KLRGLETERLGEEWVSTWWHGLPGCYDTPTGVFVSHIVWLWNVVTAWGMYDFARARYATLEGNWDKHKPELSDQENIDAFN---SFTPGYPYRTD--VDMAEFIPDTCPN-KPKVLAILKETHEWLCKENEAEVRKTLEQRGWLAAFDLQPDVPFPER 762
GGN +NV+L DMGVF ISP DKGG +Y PSK L + PI++ LW + + + HT T+G ARPSD DE A M+ R EE++ ++N +LR E + LGEEWV W GL C + IVW N++ A+GM D+A+ RYA + N++ +LS++EN+ + PG D VD A + D K KVL + T+ + K++ A + E W A+D++P FPER
Sbjct: 322 GGNLDNVRLMKEKDMGVFIISPYDKGGRLYAPSKKLRSLTLPD-LEPIQYGPLWCMSHEYMDEENAPLHTMTIGAARPSDLDEPFVTACMFAKRREEMLGKVRNVATRLRNAEIDILGEEWVQNWHKGLRNCLTEDDAYELGQIVWCHNLIKAFGMLDYAKDRYAMFDKNFNGWDFKLSNKENVKKGLIPWGYCPGIATPNDIGVDYAALLLDVPDEQKAKVLDAIHFTYSYCSKKSTANLPIPEE---WECAYDMRPWTAFPER 582 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10575.784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10575.784.1 >prot_S-firma_F_contig10575.784.1 ID=prot_S-firma_F_contig10575.784.1|Name=mRNA_S-firma_F_contig10575.784.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=237bp MGVFCISPNDKGGMMYKPSKVLVDACAESGITPIEFHSLWQWTQQPITHTback to top mRNA from alignment at S-firma_F_contig10575:2..5154- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10575.784.1 ID=mRNA_S-firma_F_contig10575.784.1|Name=mRNA_S-firma_F_contig10575.784.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=5153bp|location=Sequence derived from alignment at S-firma_F_contig10575:2..5154- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10575:2..5154- >mRNA_S-firma_F_contig10575.784.1 ID=mRNA_S-firma_F_contig10575.784.1|Name=mRNA_S-firma_F_contig10575.784.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1422bp|location=Sequence derived from alignment at S-firma_F_contig10575:2..5154- (Sphaerotrichia firma ET2_F female)back to top |