mRNA_S-firma_F_contig1056.773.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE) HSP 1 Score: 972 bits (2512), Expect = 0.000e+0 Identity = 838/1292 (64.86%), Postives = 874/1292 (67.65%), Query Frame = 3
Query: 1089 VSGSGSTNEHAG----GAAGGGAKGVVGLMNEGNWCYLNASLQALARCAPFRAHLVECVSTPDVAGRPCPLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPVPASFEPGHAALTAAMAXXXXXXXXXXXXXXXXAP-----------DDPKQTALQPSAAVAPAXXTNTGGGGAVDNDKLKQGGKATIPSTPADGAWSVNGG-GVGVERRSTERVTSGDAAVAQHRDVYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESPG--------------GGMTPTMISPRPEWEPSDATTDIHGHGGMERRTASTRSITTAA-------------------------ESEAAGG-DRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGYLGGLVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEAD--KSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESSANQ-RAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAAAFSPSLPAPVLYDLVGLVQHTGGLEHGHYTSYTRDDGSATWHHFNDTVATKVSQETVSSASPYILVYRRKRPSSSW-PGVPTQSMRSSAEATAPA-----GAAASASLLSSVGIGPAAEEARDVRSRVDIMAREMSKANG---RAPSSTANNASSAAG-------TIGADAXXXXXXXXXXXXXXXXXXXXXXXXGESQPRMSIGGGVSDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----GGTGGSNA-----------------------------------------ATREMVAVPRGVHRSLVNRYGPRTPAVVAGKPAPPDAN--GFKATPGPGESAGRVSVXXXXXXXXXMALVGSSRPLLELTSCTACAALEEEMALAKSTEQKEVAALSKVGQERRNRRKAARNXXXXXRNSAPTPE-SDPRRASRS--------GMVVGGAGDTATGAEAGREKEGSAGRQAGDDAATRKASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEKWYLMAGTWLSRWHAYVLSGAGEDLDFPTPPPGPITNGDLMDEESVPVPGKIAGKHYR 4568
S SGS NEH G G G G KGVVGL NEGN+CYLNASLQALARCAPFR HLVECV P VAGRPCPLAFAMS+LYSEMW++ XXXXXXXXXX AATP++V+RALVKGNRWFAGNGQHDAHEALRS+LDLLHEELRRPVP SFEPGHAALTAAMAXXXXXXXXXXXXXXXX D P Q PSA + A T G + + KQGGKAT P+TPADG WS +GG G G RSTERV SGD A AQ RDVYWQSAAAETFQGVLLGRITCRTCGRHSD PDRFYDLSVPLLAASAGS XXXXXXXXXXXXXXXXXX G MTPTM SPR EWEPSD + G GG RS+TT ESEAAGG DR+SDWGGWRRTRGGWCSA RDD DDG D XXXXXX GY GGLVSS+GVWLG KSVALEDCL+AFFSPERLRGANQYHCDGCG KEA KST LLHAPEILMLHVKRFRRGY WSHKVHNRV+FPLHDLDVSRWLSDHA ESS NQ RAP XXXXXXXXXXXXXXXXXX SVAAAFSPS PAPVLYDLVGLV+HTGGLEHGHYTSYTRDDGSATWHHFNDT+ TKVSQETVSSASPYILVYRRKRPSSSW PG QSMR A APA SLL+SVGIGPAAEEARDVRSRVDIMAREM+KA G R PS TA S G TIGA+A GE QPR+SIGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGTGGSN+ A +EMVAVPRGVHRSLVNRYGPRTPAVVAGKP+P DA G K PGESA R+SV XXXXXXXMALVGSSRPLLELTSCTACAALEEE AL KS EQKEVA LSKVGQER XXXXX TPE +DP G+VV D A E+ G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KWYLMAGTWLSRWHAYVLSG GEDLDFPTP PGPITNGD++DE VP+PG +AGKHYR
Sbjct: 3 ASSSGS-NEHGGSSGLGNGGAGVKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPSVAGRPCPLAFAMSKLYSEMWSD-----EGXXXXXXXXXXXAATPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMAXXXXXXXXXXXXXXXXXXXXTGPATASLLDGPSQNH-HPSAQASAA----TTDAGTDKHKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTERVASGDGAAAQ-RDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSVSATAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAMTPTMESPRAEWEPSDVSEKRTGLGG--------RSVTTLGLGGGAADEGXXXXXXXXXXXXGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDD--DDGPHDRDHEGRASXXXXXXAP---GYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTSLLHAPEILMLHVKRFRRGYFWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRAPGTSGGDAHRKSSVRRGCASPDGXXXXXXXXXXXXXXXXXX------SVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWAPGTQAQSMRPGA---APAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMTAATNGSTPGAAAAVGATIGAEAV-----------------------GEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTGGSNSWVYMSKAWALKWATSAYPGPVSNHHVVCRHGRVKPNVGVKRAAKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKEVAGLSKVGQERXXXXXXXXXXXXXXXXXGSTPERNDPXXXXXXXXXXXXXXGIVV----DAAIATESTHAGNGET-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGSGTLDDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKWYLMAGTWLSRWHAYVLSGTGEDLDFPTPSPGPITNGDIVDENLVPIPGMVAGKHYR 1232
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI) HSP 1 Score: 934 bits (2413), Expect = 7.550e-312 Identity = 699/973 (71.84%), Postives = 733/973 (75.33%), Query Frame = 3
Query: 1125 GAAGGGAKGVVGLMNEGNWCYLNASLQALARCAPFRAHLVECVSTPDVAGRPCPLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPVPASFEPGHAALTAAMAXXXXXXXXXXXXXXXXAP---------DDPKQT---ALQPSAAVAPAXXTNTGGGGAVDNDKLKQGGKATIPSTPADGAWSVNGGGVGVERRSTERVTSGDAAVAQHRDVYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESP-----------GGGMTPTMISPRPEWEPSDATTDIHGHGGMERRTASTRSITTAAESEAAGGDRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGYLGGLVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEADKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESSANQRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAAAFSPSLPAPVLYDLVGLVQHTGGLEHGHYTSYTRDDGSATWHHFNDTVATKVSQETVSSASPYILVYRRKRPSSSW-PGVPTQSMRSSAEATAPA-----GAAASASLLSSVGIGPAAEEARDVRSRVDIMAREMSKANG---RAPS-------STANNASSAAGTIGADAXXXXXXXXXXXXXXXXXXXXXXXXGESQPRMSIGGGVSDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------GTGGSNAATREMVAVPRGVHRSLVNRYGPRTPAVVAGKPAPPDAN--GFKATPGPGESAGRVSVXXXXXXXXXMALVGSSRPLLELTSCTACAALEEEMALAKSTEQKE 3902
G G G KGVVGL NEGN+CYLNASLQALARCAPFRAHLVECV P VAGRPCPLAFAMS+LYSEMW++ XXXXXXXXXXRA TP++V+RALVKGNRWFAGNGQHDAHEALRS+LDLLHEELRRPVP SFEPGHAALTAAMAXXXXXXXXXXXXXXXX DDP Q + Q SAA A G N + KQGGKAT P+TPADG WS +GG G RSTERV SGD A AQ RDVYWQSAAAETFQGVLLGRITCRTCGRHSD PDRFYDLSVPLLAASAGS XXXXXXXXXXXXXXXXXXXXXXXXX GG MTPT+ SPR EWEPSD D H HG AA+ GGDR+SDWGGWRRTRGGWCSA RDD DDG D XXXXXXXXXXXXXX PG Y GGLVSS+GVWLG KSVALEDCL+AFFSPERLRGANQYHCDGCG KEADKST LLHAPEILMLHVKRFRRGYLWSHKVHNRV+FPLHDLDVSRWLSDHA ESS NQ+ + XXXXXXXXXXXXXXXXXXXXXXXXX SVAAAFSPS PAPVLYDLVGLV+HTGGLEHGHYTSYTRDDGSATW+HFNDT+ TKVSQ+TVSSASPYILVYRRKRPSSSW PG QSMR A APA SLL+SVGIGPAAEEARDVRSRVDIMAREM+KA G R PS ST A++ GTIGA+A GE QPR+SIGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTGGSN+AT+EMVAVPRGVHRSLVNRYGPRTPAVVAGKP+P DA G K PGESA R+SV XXXXXXXMALVGSSRPLLELTSCTACAALEEE AL KS EQKE
Sbjct: 59 GNGGAGVKGVVGLTNEGNFCYLNASLQALARCAPFRAHLVECVPGPSVAGRPCPLAFAMSKLYSEMWSD-----EGXXXXXXXXXXRAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMAXXXXXXXXXXXXXXXXXXXXXXXXSLLDDPSQNHHPSAQASAAATDA--------GTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNERSTERVASGDGATAQ-RDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEMTPTVESPRAEWEPSD---DQH-HGKA-----------YAADQAPGGGDRSSDWGGWRRTRGGWCSATRDD--DDGPHDREXXXXXXXXXXXXXXAPG-YFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXX-----SVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWYHFNDTITTKVSQDTVSSASPYILVYRRKRPSSSWGPGTQAQSMRPGA---APAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMNAATNGSTPGAAAAVGGTIGAEAV-----------------------GEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGGSNSATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE 968
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: A0A443SL64_9ACAR (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SL64_9ACAR) HSP 1 Score: 133 bits (334), Expect = 2.130e-27 Identity = 145/654 (22.17%), Postives = 232/654 (35.47%), Query Frame = 3
Query: 1143 AKGVVGLMNEGNWCYLNASLQALARCAPFRAHLVECVSTPDVAGRPCPLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPVPASFEPGHAALTAAMAXXXXXXXXXXXXXXXXAPDDPKQTALQPSAAVAPAXXTNTGGGGAVDNDKLKQGGKATIPSTPADGAWSVNGGGVGVERRSTERVTSGDAAVAQHRDVYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESPGGGMTPTMISPRPEWEPSDATTDIHGHGGMERRTASTRSITTAAESEAAGGDRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGYLGGLVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEADKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESSANQRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAAAFSPSLPAPVLYDLVGLVQHTGGLEHGHYTSYTRDDGSATWHHFNDTVATKVSQETVSSASPYILVYRR 3104
+KG+ GL N GN CY+NA+LQAL+ C +++C S G LA + L E+W R P+ ++ + F G QHDA E LR LD LHEEL+ S E + M DD + + + G + + +A+ PS+ + ++ GG S+ ++ + A+ R + ++S ++ F G +L + C TC S + F D+S+P+ A S++S G M + S + P R +ST S+T+ G+L ++S WL +V+L+DCL AFFS + L+G N Y C+ C L+ K +++L PEIL +H+KRFR L+S K+ + V FPL LD++ +++ + +N +YDLV ++ H G + GHYT+Y + + TW+ F+D T V + V S Y+L YR+
Sbjct: 165 SKGLTGLQNLGNTCYVNAALQALSNCPQLTRFMLDCSSYIRTGG----LAKSYMRLIHEIWDSKRPSY--------------VAPNGIVHGIKNVCPVFRGYAQHDAQEFLRCFLDQLHEELKE---CSSEQKEQHTESEMNREMS--------------DDESNSDADYETCDSGLSSERSAFGDELCHVHDDDAERASTPSSQPSVSQGISPGG------SSPVNSTRKSETAKKRSISYRSIISDIFDGRILSSVQCLTCDNISTTRETFQDISLPI---------------------PNRDHLHMLRAAASQSSKDSAGTSMGSS--SQTAAYNPLS-------------RASSTLSLTST----------------------------------------------NLTLPTIYHWIWGWLEWVLS----WLWGPTVSLQDCLSAFFSADELKGDNMYSCEKCKKLRNGIKFSKVLQLPEILCIHLKRFRHELLYSSKISSHVTFPLEGLDMAPYMAKGQGSNYSNN-------------------------------------------------------------VTVYDLVAVICHHGTVASGHYTTYALNTINETWYEFDDQYVTAVDPQQVLSCEAYVLFYRK 630
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: A0A6G0UIR6_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UIR6_9BILA) HSP 1 Score: 129 bits (323), Expect = 4.180e-26 Identity = 151/665 (22.71%), Postives = 237/665 (35.64%), Query Frame = 3
Query: 1146 KGVVGLMNEGNWCYLNASLQALARCAP----FRAHLVECVSTPDVAGRPC---PLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPVPASF---EPGHAALTAAMAXXXXXXXXXXXXXXXXAPDDPKQTALQPSAAVAPAXXTNTGGGGAVDNDKLKQGGKATIPSTPADGAWSVNGGGVGVERRSTERVTSGDAAVAQHRDVYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESPGGGMTPTMISPRPEWEPSDATTDIHGHGGMERRTASTRSITTAAESEAAGGDRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGYLGGLVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEADKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESSANQRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAAAFSPSLPAPVLYDLVGLVQHTG-GLEHGHYTSYTRDDGSATWHHFNDTVATKVSQETVSSASPYILVYRRK 3107
+G+VGL N+GN CY+NA++QAL+ C P FR++L ++ D G P P++ A EL ++W+ + A P+ + F G Q DA E +R LD+LH+ELR P F E G++ ++ + D A + ++ G D K K + P + + A S + ST + GD QH +S + F G L+ + C TC S+ + F D+S+ + S RE G T + S E + G M + + I T A + + W +L ++++ ++ +++LEDCL AFFS + L G + Y C+ C L+ K RL PEIL +H+KRFR L++ KV RV FPL+DLD+ ++ E + + FS YDLV V H G G E GHY ++ R+D W+ F+D+ + + + V S Y+L Y++K
Sbjct: 44 RGLVGLFNQGNSCYMNAAIQALSNCPPLREYFRSYLPSTQASRDANGLPPVKKPVSDAFQELLMKIWSNHQV------------RGNAIGPTLFSYRIKDRCAQFRGFTQQDAQEFIRCFLDILHQELRHPASIKFGSREVGNSLSSSCSSS-----------------QDELNLGENDHFETADSGLSSDAGDSKPDAPK-KVSTSSPKPQSSPERARSPS--------ESTTKSKKGDV---QHS----RSIITDVFDGELVSTVKCMTCHHLSNTRETFQDISLSIPTVEQISLL-----------------------------RE----GSTIELESSSSSSEAESTVDESTGSVDMPSPESKKKQIMTTANQFS--------YAYW------------------------------LIFFAKSWLIDSWLNHIINAY-KFMFSSNISLEDCLYAFFSADHLHGEDMYSCEKCSKLRNGVKQCRLTKLPEILCIHLKRFRHELLYNSKVGTRVTFPLYDLDMKPFVMHSVLEQADPEE-----------------------------------------------------FSTE------YDLVAFVSHRGAGAEFGHYVAFCRNDVDGNWYEFDDSFVSPIPEADVMSREAYVLFYQKK 532
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: A0A443R6Q8_9ACAR (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A443R6Q8_9ACAR) HSP 1 Score: 126 bits (316), Expect = 2.890e-25 Identity = 151/657 (22.98%), Postives = 235/657 (35.77%), Query Frame = 3
Query: 1143 AKGVVGLMNEGNWCYLNASLQALARCAPFRAHLVECVSTPDVAGRPCPLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPVPASFEPGHAALTAAMAXXXXXXXXXXXXXXXXAPDDPKQTALQPSAAVAPAXXTNTGGGGAVDNDKLKQGGKATIPST-PADGAWSVNGGGVGVERRSTERVTSGDAAVAQHRDVYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESPGGGMTPTMISPRPEWEPSDATTDIHGHGGMERRTASTRSITTAAESEAAGGDRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGY--LGGLVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEADKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESSANQRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAAAFSPSLPAPVLYDLVGLVQHTGGLEHGHYTSYTRDDGSATWHHFNDTVATKVSQETVSSASPYILVYRR 3104
+KG+ GL N GN CY+NA+LQAL+ C +++C S G LA + L E+W R PS ++ + F G QHDA E LR LD LHEEL+ E + + A D +T ++ A + G ++D G +A+ PS+ P+ S +G S+ + A A+ R ++S ++ F G +L + C TC S + F DLS+P+ A S+E+ G + S + P R +ST S+++ P Y + G + V WL +V+L+DCL AFFS + L+G N Y C+ C L+ K +++L PEIL +H+KRFR L+S K+ + V FPL LD++++++ + + NQ +YDLV ++ H G + GHYT+Y + + TW+ F+D T V + V S Y+L YR+
Sbjct: 163 SKGLTGLQNLGNTCYVNAALQALSNCPQLTRFMLDCSSYIRKGG----LAKSYMRLIHEIWDSKRPSY--------------VVPSGIVHGIKNVCPVFRGYTQHDAQEFLRCFLDQLHEELKETSNDQKEAYGDSDSNRDASEDESNS-----------DADYETCDSGLSSERSAFGDDLCLGHIYEDDA---GDRASTPSSQPSVSQTSPSG--------SSPLSSVRKADSAKKRPTSYRSIISDIFDGRILSSVQCLTCDNISTTKETFQDLSLPI---------------------PNRDHLHMLRAAASQTSKENSGVSLGTNASSS--SYNPLS-------------RASSTLSLSS----------------------------------------------------NNVNLPSIYHWIWGWLEWVLSWLWGPAVSLQDCLSAFFSADELKGDNMYSCEKCKKLRNGIKFSKVLQLPEILCIHLKRFRHELLYSSKISSHVTFPLEGLDMAQFMA--RGQGTNNQ-------------------------------------------------------------VTIYDLVAVICHHGTVASGHYTTYALNTINETWYEFDDQYVTAVDPQQVMSCEAYVLFYRK 628
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: A0A182DZ38_ONCOC (Ubiquitinyl hydrolase 1 n=1 Tax=Onchocerca ochengi TaxID=42157 RepID=A0A182DZ38_ONCOC) HSP 1 Score: 122 bits (307), Expect = 4.510e-24 Identity = 157/673 (23.33%), Postives = 233/673 (34.62%), Query Frame = 3
Query: 1146 KGVVGLMNEGNWCYLNASLQALARCAPFRAHLVECVSTPDVA-------GRPCPLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPVPASFEPGHAALTAAMAXXXXXXXXXXXXXXXXA------PDDPKQTALQPSAAVAPAXXTNTGGGG----AVDNDKLKQGGKATIPSTPADGAWSVNGGGVGVERRSTERVTSGDAAVAQHRD-VYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESPGGGMTPTMISPRPEWEPSDATTDIHGHGGMERRTASTRSITTAAESEAAGGDRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGYLGGLVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEADKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESSANQRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAAAFSPSLPAPVLYDLVGLVQHTGG-LEHGHYTSYTRDDGSATWHHFNDTVATKVSQETVSSASPYILVYRRK 3107
+G+ GL N GN CY+NA++QAL+ C+PF S A G P P++ + L +W+E R G P L F G Q DA E +R +LD+LH ELR+PV A +E H+ + + + DD +Q S + + T ++ ND+L Q IP+ SVN ++ S E D Q + +Y++S E F G L + C TC S+ + F DLS+ I R + E + S+ E E + D+ D+ D GS P GGL SV + V+L D L AFF P+ L G N Y C+ C L+ K +++ PEIL +H+KRFR +S K+ N+V FP+HDLD++ ++++ PVLYDLV + H G E GHY +Y +++ W+ F+DTV T++ V S Y+L Y+R+
Sbjct: 104 RGLTGLTNLGNTCYMNAAIQALSNCSPFSDFFRSLDSLASFASKILDNNGEP-PVSRSFRCLLQALWSEERTGY--------------INPQLFLTQFRHYCPQFCGLSQQDAQEFIRCLLDVLHRELRQPVFA-WEYRHSTRSCNIRTKEESIFGFIRSRYVPSRSSSCSSDDDEQYETADSGWSSDGEMSATSKANKHLESISNDQLPQ-----IPN------HSVN------QQESGET----DQRSRQSKSPIYYRSLITEVFDGRLSSIVKCLTCHHLSETCETFQDLSL---------------------------------------------------SIPTREQLEHIASC-----------------SMNLNKEGEISKNDQNEDY-------------------DSGSS--------------FWRWPWWLGGGLFRSVYNYFFGDVVSLNDALTAFFMPDDLCGENMYSCEKCAKLRNGIKICKIISPPEILCIHLKRFRHELSYSVKIRNKVAFPIHDLDLTPFIANFDENKE----------------------------------------------------------------PVLYDLVAFITHYGANAESGHYVAYCKNETDDNWYEFDDTVVTRLEIADVLSKEAYVLFYQRQ 574
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: A0A1S0U8T5_LOALO (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Loa loa TaxID=7209 RepID=A0A1S0U8T5_LOALO) HSP 1 Score: 121 bits (303), Expect = 8.930e-24 Identity = 147/664 (22.14%), Postives = 222/664 (33.43%), Query Frame = 3
Query: 1146 KGVVGLMNEGNWCYLNASLQALARCAPFRAHLVECVSTPDVA-------GRPCPLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPVPASFEPGHAALTAAMAXXXXXXXXXXXXXXXXAPDDPKQTALQPSAAVAPAXXTNTGGGGAVDNDKLKQGGKATIPSTPADGAWSVNGGGVGVERRSTERVTSGDAAVAQHRD-VYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESPGGGMTPTMISPRPEWEPSDATTDIHGHGGMERRTASTRSITTAAESEAAGGDRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGYLGG-LVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEADKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESSANQRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAAAFSPSLPAPVLYDLVGLVQHTGG-LEHGHYTSYTRDDGSATWHHFNDTVATKVSQETVSSASPYILVYRRK 3107
+G+ GL N GN CY+NA++QAL+ C PF S A G P P++ + L +W+E R+ R P L + F G Q DA E +R +LD+LH ELR+PV F + +T P +A T G + ++ KA+ + P + V ++ +E D Q R +Y++S E F G L + C TC S+ + F DLS+ + T + GH ++ + E E S W W S +LGG L SV +L V+L D L AFF P+ L G N Y C+ C L+ K +++ PEIL +H+KRFR +S K+ N+V FP+HDLD++ +++ PVLYDLV + H G E GHY +Y +++ W+ F+DT+ T++ + S Y+L Y+R+
Sbjct: 126 RGLTGLTNLGNTCYMNAAIQALSNCPPFSDFFRSVDSVASFASKILDNNGEP-PVSRSFRCLLRSLWSEERS--------------RCINPQLFLAQVRHQYPQFRGLAQQDAQEFIRCLLDVLHRELRQPV---FAWEYRNITHTCNTQTEEESISGFIRSRYVPSRSSSSASDDDERY------ETADSGWSSDGEVAAASKASKHAGPISSDRRTHIPDHSVNQQESEET---DQRNKQSRSPIYYRSLVTEVFDGRLSSVVKCLTCHHLSETYETFQDLSLSI-------------------------------------------------------------PTREQLGHIASYSMNLNSENKKNNKEQEEVDSSGNSFWQ--------WPS---------------------------------WLGGSLFRSVYHYLFGDLVSLNDALAAFFLPDDLCGENMYSCEKCAKLRNGVKICKIIDPPEILCIHLKRFRHELSYSVKIRNKVTFPVHDLDLTPFIASFEKNKE----------------------------------------------------------------PVLYDLVAFITHYGANAESGHYVAYCKNEMDDNWYEFDDTMVTRLEIADILSKEAYVLFYQRQ 596
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: N6TN69_DENPD (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=4 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6TN69_DENPD) HSP 1 Score: 120 bits (301), Expect = 1.570e-23 Identity = 125/540 (23.15%), Postives = 201/540 (37.22%), Query Frame = 3
Query: 1146 KGVVGLMNEGNWCYLNASLQALARCAPFRAHLVECVSTPDVA--GRPCPLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPVPASFEPGHAALTAAMAXXXXXXXXXXXXXXXXAPDDPKQTALQPSAAVAPAXXTNTGGGGAVDNDKLKQGGKATIPSTPADGAWSVNGGGVGVERRSTERVTSGDAAVAQ----------HRDVYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESPGGGMTPTMISPRPEWEPSDATTDIHGHGGMERRTASTRSITTAAESEAAGGDRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGYLGGLVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEADKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESS 2729
+G+VGL N GN CY+NA+LQAL+ P + V+C + ++ G+ L+ L ++MW + A TPS +L + + F G QHD E LR+ +D LHEEL++PV F + + T ++A D + + + + + A ++ + GGK+ + S+ A+ G RR RV S +Q + + ++S ++ F G LL + C TC R S + + F DLS+P+ + D +HG RTA+ + + A G W W L++ + W V L DCL AFFS + L+G N Y C+ C L+ K +++L PE+L +H+KRFR ++S K+ + V FPL LD+ W H++ +S
Sbjct: 176 RGLVGLQNIGNTCYMNAALQALSNTKPLTRYFVDCANIVEILSEGKKPGLSRTYQALITDMWVKRNAQG-------------FVTPSGILYGIRSVHAMFRGYHQHDTQEFLRNFMDQLHEELKQPVAPEFANTNDSDTFSLAMEETHSVGLSY--------DSSEGEYETCDSGVSERSSLSDDSEAQQVNEAQTGGKSPVVSSLANKRRLSRCQSPG--RRQRLRVASQSVIDSQPGLSSNQIHPRKHLKYRSIISDIFDGKLLSSVQCLTCDRVSSRIETFQDLSLPIPSR---------------------------------------------------------DHLLLLHG------RTATPNATCSDAVLPVQDG-----WMSW----------------------------------------------LLAWLRSWWYGPVVTLHDCLSAFFSTDELKGDNMYSCEKCNKLRNGVKFSKVLQLPEVLCIHLKRFRHELMYSSKISSAVSFPLKGLDM--WPYLHSSNTS 576
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: UPI00139053E5 (ubiquitin carboxyl-terminal hydrolase 20-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00139053E5) HSP 1 Score: 120 bits (300), Expect = 1.970e-23 Identity = 155/706 (21.95%), Postives = 237/706 (33.57%), Query Frame = 3
Query: 1146 KGVVGLMNEGNWCYLNASLQALARCAPFRAHLVECVSTPDVAGRPCPLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPV--PAS------------------------------------------------FEPGHAALTAAMAXXXXXXXXXXXXXXXXAPDDPKQTALQPSAAVAPAXXTNTGGGGAVDNDKL--KQG-GKATIPSTPADGAWSVNGGGVGVERRSTERVTSGDAAVAQHRDVYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESPGGGMTPTMISPRPEWEPSDATTDIHGHGGMERRTASTRSITTAAESEAAGGDRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGYLGGLVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEADKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESSANQRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAAAFSPSLPAPVLYDLVGLVQHTGGLEHGHYTSYTRDDGSATWHHFNDTVATKVSQETVSSASPYILVYRR 3104
+G+ GLMN GN CY+NA+LQAL+ C P +EC + A P +A + E+W++ R + P+ +LR++ N F G GQ DA E LR ++D LHEEL++P+ PAS + P H T + DP + + A A + A +N+ + K G K + + A S+N +R +T++ T + + ++S + F G + + C TC R S + + F DLS+P+ PG D T IH +T + E A D+ GW + W V WL V+L+DCL AFFS + L+G N Y C+ C L+ K ++L PEIL +H+KRFR +S K+ + + FP+ LD+ ++ ES + YDL ++ H G + GHY ++ ++ S TW FND+ T+VS+ VSS Y+L YRR
Sbjct: 126 RGLCGLMNIGNTCYMNAALQALSNCPPLTQFFLECNTCISDAKHP-GVAINYYNVVRELWSKKRC--------------KYIVPTQLLRSIRAVNSQFRGYGQQDAQEFLRCIMDQLHEELKQPITTPASDSDSXXXXXDPNIQAKSRLLGGTSLVRQSSGITEDEDMDTGTGRSVNKYTPIHPHGTPSSDTDEEMQLDSQQASVVH---DPSEVQIDIDMAEEDANLSAIDNSKASNNELMSPKDGENKRPVSANDAKKNSSLNR----FKRSTTKKGTD------KKKTFNYRSIITDLFDGKVQSSVQCLTCNRVSSRIETFQDLSLPI-----------------------------------------PG----------------KDELTVIHASQCAPL-------VTCSRGGEFADLDK-----GWMMSIFDW-------------------------------------------VRRWLFGPQVSLQDCLSAFFSADELKGDNMYSCEKCQKLRNGIKLCKVLQLPEILCVHLKRFRHEMYFSSKISHFISFPITGLDMKPFI---VKESRG-----------------------------------------------------------LVEKSTCYDLTAIITHHGNVGAGHYVAFAKNYISNTWFEFNDSWVTEVSESFVSSVEAYVLFYRR 629
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Match: A0A0R3RST6_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3RST6_9BILA) HSP 1 Score: 119 bits (297), Expect = 4.610e-23 Identity = 155/675 (22.96%), Postives = 228/675 (33.78%), Query Frame = 3
Query: 1146 KGVVGLMNEGNWCYLNASLQALARCAPFRAHLVECVSTPDVAG------RPCPLAFAMSELYSEMWAEGRAGSGSXXXXXXXXXXRAATPSDVLRALVKGNRWFAGNGQHDAHEALRSMLDLLHEELRRPVPASFEPGHAALTAAMAXXXXXXXXXXXXXXXXAP----------DDPKQTALQ--PSAAVAPAXXTNTGGGGAVDNDKLKQGGKATIPSTPADGAWSVNGGGVGVERRSTERVTSGDAAVAQHRD-VYWQSAAAETFQGVLLGRITCRTCGRHSDQPDRFYDLSVPLLAASAGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGHRSRESPGGGMTPTMISPRPEWEP-SDATTDIHGHGGMERRTASTRSITTAAESEAAGGDRTSDWGGWRRTRGGWCSAARDDGDDDGSRDXXXXXXXXXXXXXXXXXPGGYLGGLVSSVGVWLGLKSVALEDCLEAFFSPERLRGANQYHCDGCGTLKEADKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHAAESSANQRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAAAFSPSLPAPVLYDLVGLVQHTG-GLEHGHYTSYTRDDGSATWHHFNDTVATKVSQETVSSASPYILVYRRK 3107
+G+ GL N GN CY+NA++QAL+ C PF S A R P++ + L +W+E R+ R P L + F G Q DA E +R +LD+LH ELR+PV F + +T P D+ +TA S PA + +D+L Q IP P ++ S+E D Q R VY++S E F G L + C TC S+ + F DLS+ I R + E + + D++ S +S + E E +S W P GGL SV +L V+L D L AFF P+ L G N Y C+ C L+ K ++++ PEIL +H+KRFR +S K+ N V FP+HDLD++ +++ PVLYDLV + H G E GHY +Y +++ W+ F+DTV T++ + S Y+L Y+R+
Sbjct: 126 RGLTGLTNLGNTCYMNAAIQALSNCPPFSDFFRSLDSVASFASKTLGSNREPPVSRSFRCLLQALWSEERS--------------RCVNPQLFLSQVRHHYPQFRGLTQQDAQEFIRCLLDVLHRELRQPV---FAWEYRNITRHCNRQTEEESISSFIRNRYVPSRSSSHASDEDERYETADSGWSSDGDVPATSKANKHSELMSSDQLAQ-----IPDHPVK------------QQESSET----DQRNRQSRSPVYYRSLITEVFDGRLSSIVKCLTCHHLSETCETFQDLSL---------------------------------------------------SIPTREQLEHIASYSVDLN----------SEKSKISRNEQEEVNDSGSSFW----------------------------------------QWPWWLGGGLFRSVYHYLFGDLVSLNDALAAFFLPDDLCGENMYSCEKCAKLRNGVKICKIVNPPEILCIHLKRFRHELSYSVKIRNMVTFPVHDLDLTPFIAGFEENKE----------------------------------------------------------------PVLYDLVAFITHYGTNAESGHYVAYCKNEMDDNWYEFDDTVVTRLEIADILSKEAYVLFYQRQ 597 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1056.773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1056.773.1 >prot_S-firma_F_contig1056.773.1 ID=prot_S-firma_F_contig1056.773.1|Name=mRNA_S-firma_F_contig1056.773.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1349bp MPGRESAGRGGGNRRQRPRTVPDVSLSPVERAGPSGANGIGTQRNRGANGback to top mRNA from alignment at S-firma_F_contig1056:12880..24979- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1056.773.1 ID=mRNA_S-firma_F_contig1056.773.1|Name=mRNA_S-firma_F_contig1056.773.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=12100bp|location=Sequence derived from alignment at S-firma_F_contig1056:12880..24979- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1056:12880..24979- >mRNA_S-firma_F_contig1056.773.1 ID=mRNA_S-firma_F_contig1056.773.1|Name=mRNA_S-firma_F_contig1056.773.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=8094bp|location=Sequence derived from alignment at S-firma_F_contig1056:12880..24979- (Sphaerotrichia firma ET2_F female)back to top |