mRNA_S-firma_F_contig1056.771.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI) HSP 1 Score: 686 bits (1769), Expect = 2.030e-240 Identity = 335/482 (69.50%), Postives = 378/482 (78.42%), Query Frame = 1
Query: 1 MATFASP-QRVCSLPGCAQPCFQDQDGIVHSYCSRTCSNDALARAKWASLANGSTSPLYSNQPTTQPPRCQLSGCSLTVYVDESTGRVHNYCGRRHADLAAAXXXXXXXXDDVVEVTPAPVRTKGEAECRLEGCRELVYRDPVTAVESEYCSNRHYVMGAALLNRECIRDXXXXXXXVDEDTGDVLDYCGSLCAKKVGMPHLVGQGECSLPGCVIPNLVHPRTQREMGYCGEDHRLRATQRSLGPNPERHVDRTFRGGTTSADDFQLSVLTNRHPDYLSLKEQFFDAWAKP---TDVSVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGGPCGESTCNVCSICTHGFRLRDNVGATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEKTDRSGKKVRCMFLSSVAIGRALTTMRGRFEPDENLCPPPGFDSVVGEPGVDLNYPEMVVYREEAALPTHLVVYTLHD 1434
MA FA +R+C+LP C PCF+DQDG VHSYCSRTCSN+ALARAKWASL + S + + + RC+L+GCS TVYVDE +GRVH +CGR HA+ A A AP KG EC LEGC+ELVYRDPVT V+S+YCSNRHYV G A+LN ECIRD VDE TG VLDYCGS CA +VGM +LVG G CSLPGCV PN VHPR ++E GYC EDHRLRATQRSLGPNPE VDRTFRGGTTSADDFQLSVLTNRHP+YLS K+QF W KP T VSV RIFKV+VP+DIRR+TE MGQVGN++R FHGTSCS++CTFFVDLRGGPCGESTC VC+ICTHGF+LRDNVG TARRTNF LR+G+GLYFSSVSGKANDYAE SEKTDRSGKKVRCMFLSSV +GRA T G+ P++ CPPPGFDSVVGE G LNYPE+VVY+EEAALPTHL+VY LH+
Sbjct: 1 MAMFAGTHRRLCALPDCQSPCFEDQDGFVHSYCSRTCSNEALARAKWASLRSSSRNRGGGSDGS----RCKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSECIRDGCSRAAWVDEGTGGVLDYCGSRCAGEVGMNYLVGVGVCSLPGCVNPNFVHPRDRQETGYCCEDHRLRATQRSLGPNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQ--CPPPGFDSVVGEKGPALNYPEVVVYKEEAALPTHLIVYALHE 476
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI) HSP 1 Score: 411 bits (1056), Expect = 3.490e-133 Identity = 220/480 (45.83%), Postives = 281/480 (58.54%), Query Frame = 1
Query: 1 MATFASPQRVCSLPGCAQPCFQDQDGIVHSYCSRTCSNDALARAKWASLANGSTSPLYSNQPTTQPPRCQLSGCSLTVYVDESTGRVHNYCGRRHADLAAAXXXXXXXXDDVVEVTPAPVRTKGEAECRLEGCRELVYRDPVTAVESEYCSNRHYVMGAALLNRECIRDXXXXXXXVDEDTGDVLDYCGSLCAKKVGMPHLVGQGECSLPGCVIPNLVHPRTQREMGYCGEDHRLRATQRSLGPNPERHVDRTFRGGTTSADDFQLSVLTNRHPDYLSLKEQFFDAWAKPTDV---SVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGGPCGESTCNVCSICTHGFRLRDNVGATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEKTDRSGKKVRCMFLSSVAIGRALTTMRGRFEPDENLCPPPGFDSVVGEPGVDLNYPEMVVYREEAALPTHLVVYTLH 1431
MA A+P R+C +P C +PC D +VH +C RT + +A++R SL +P C+L GCSL VY D + V A T A G + C+L GC V+ DP T++ES+YCS H A REC+R + G YC S CA G C L GC L H +T + YCGEDHR+R Q++LG N + +V+R F GTT DF+L VL+ HP Y SL +QF + W KP V SV++I V+VP D+RRKT+ + VGN++R FHGTSCS C FFVDLRG PC + C VCSICTHGF L+ NVG TARRTNF LR+GEGLYFSSVSGKANDYA+FSEKTD +G+++RCMF+++VA G+A T + +N CPP G+DSVVGE G LNY E+VVY++EAALPTHL+VY+ H
Sbjct: 1 MAVPAAPSRLCGIPECTRPC-HDGGTVVHDFCGRTHAEEAVSRGIRPSL----------RRPHGNCHECKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQW-------TRSTSAGNTNAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHR---AQANTRECLRKGCTSTAWLANIEGP--QYCSSRCAIDDGGQKAGSSRSCKLAGCSEVALYHHQTGNALDYCGEDHRVRNEQQTLGTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQ--QNECPPAGYDSVVGEVGQGLNYDELVVYKDEAALPTHLIVYSRH 455
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: D8LSB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB5_ECTSI) HSP 1 Score: 298 bits (764), Expect = 1.940e-90 Identity = 176/410 (42.93%), Postives = 221/410 (53.90%), Query Frame = 1
Query: 28 VCSLPGCAQPCFQDQDGIVHSYCSRTCSNDALARAKWASLANGSTSPLYSNQPTTQPPRCQLSGCSLTVYVDESTGRVHNYCGRRHADLAAAXXXXXXXXDDVVEVTPAPVRTKGEAECRLEGCR-----------------ELVYRDPVTAVESEYCSNRHYVMGAALLNRECIRDXXXXXXXVDEDTGDVLDYCGSLCAKKVGMPHLVGQGECSLPGCVIPNLVHPRTQREMGYCGEDHRLRATQRSLGPNPERHVDRTFRGGTTSADDFQLSVLTNRHPDYLSLKEQFFDAWAKPTD-VSVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGGPCGESTCNVCSICTHGFRLRDNVGATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEK 1203
VCSLP C +P Q + GI+H +CSRT + +A G PL+ +P + CQL GC+ V+ DE+T V +A A V + +P+T ++ C ++ D +GD L +CGS CA G HLVGQ +CSLPGC ++H RT +MGYC + HR++A +R+L NPE HVDRTFRGG + DDF+LSVLT H Y SLKEQF + KP D +SV+RIFKV+VP D+R+K + N +R FHGTSCSD C FF+DLRGGPCG CNVCSICTHGFRLR +VG TA+RTN LR+GEGLYFSSVSGKANDYA SEK
Sbjct: 5 VCSLPECYRPRHQRR-GIIHDFCSRTHAQEAADM--------GLIPPLH--RPHGRCHVCQLHGCNTEVFFDEATNTVXXXXXXXXXXMARARGQWPRPGMQGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRPAWM---------------------DHRSGDQLAFCGSRCAYTCGAQHLVGQMKCSLPGCNDFTMLHDRTMDDMGYCCDYHRIKAEERNLTQNPEAHVDRTFRGGPS--DDFKLSVLTKSHQAYSSLKEQFLVKFQKPVDGLSVERIFKVQVPGDVRQKHKVFEEATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAAQSEK 380
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: A0A6H5JPY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY9_9PHAE) HSP 1 Score: 290 bits (743), Expect = 5.040e-88 Identity = 157/351 (44.73%), Postives = 196/351 (55.84%), Query Frame = 1
Query: 205 CQLSGCSLTVYVDESTGRVHNYCGRRHADLAAAXXXXXXXX-----------------DDVVEVTPAPVRTKGEAECRLEGCRELVYRDPVTAVESEYCSNRHYVMGAALLNRECIRDXXXXXXXVDEDTGDVLDYCGSLCAKKVGMPHLVGQGECSLPGCVIPNLVHPRTQREMGYCGEDHRLRATQRSLGPNPERHVDRTFRGGTTSADDFQLSVLTNRHPDYLSLKEQFFDAWAKPTD-VSVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGGPCGESTCNVCSICTHGFRLRDNVGATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEK 1203
CQL GC+ ++ DE T VH++C RRHA++A A + +P+T ++ C ++ D +GD L +CGS CA G H VGQ +CSLPGC ++H RT +MGYC + HR++A +R+L NPE HVDRTFRGG + DDF+LSVLT H + SLKEQF + KP D +SV+RIFKV+VP D+R K + N +R FHGTSCSD C FF+DLRGGPCG CNVCSICTHGFRLR + G TA+RTN LR+GEGLYFSSVSGKANDYA SEK
Sbjct: 23 CQLHGCNAEIFFDEDTNTVHDFCCRRHANMARARGQWPRPGMQGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPLTVCQNVRCQRPAWM---------------------DIRSGDQLAFCGSRCAYTCGAHHFVGQMKCSLPGCNDFTMLHDRTMDDMGYCRDYHRIKAEERNLTQNPEAHVDRTFRGGPS--DDFKLSVLTKSHQAHSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRHKHKVFEKATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSAGRTAQRTNMKLRYGEGLYFSSVSGKANDYAAQSEK 350
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI) HSP 1 Score: 292 bits (748), Expect = 1.400e-87 Identity = 178/473 (37.63%), Postives = 240/473 (50.74%), Query Frame = 1
Query: 31 CSLPGCAQPCFQDQDGIVHSYCSRTCSNDALARAKWASLANGSTSPLYSNQPTTQPPRCQLSGCSLTVYVDESTGRVHNYCGRRHADLAAAXXXXXXXXDDVVEVTPAPVRTKGEAECRLEGCRELVYRDPVTAVESEYCSNRHYVMGAALLNRECIRDXXXXXXXVDEDTGDVLDYCGSLCAKKVGMPHLVGQGE-CSLPGCVIPNLVHPRTQREMGYCGEDHRLRATQRSLGP--NPERHVDRTFRGGTTSADDFQLSVLTNRHPDYLSLKEQFFDAWAKPTD---VSVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGGPCGESTCNVCSICTHGFRLRDNVGATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEKTDRSGKKVRCMFLSSVAIGRALTTMRGRFEPDENLCPPPGFDSVVGEPGVDLNYPEMVVYREEAALPTHLVVYTLH 1431
C +P C +P Q + GIVH++C RT + +A++R A L ++P + CQL GCS VY D TGRV+ P HY+ G A L C R + D YC + C K + G C L C + L H +T ++GYC E HRL + S G + E +V + GT F L L HP+ SL+ QF W KP +SV RIF+V+VP ++R K +++ V N++R FHGTSCSD C F VD + PCG +C++C+I GF+L +NVG TA NF LR+G+G+YFSSVSGKANDYA+ + KT + G K+RCMF+++VA G+A +T D+ CPPPG++SVVGE G LNY E+VVY+EEAALPTHL+VY LH
Sbjct: 10 CDIPECTRPRHQ-RAGIVHNFCGRTHAMEAVSRGLAAKL----------DRPHGRCHVCQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGDWI------------PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARL---CARRGCTSTAWLANT--DSRQYCSAYCFSKERLVLNKHAGSVCKLRYCSVGTLHHLQTGEDLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVGTPR---FNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKAL--DDGKCPPPGYESVVGEVGQGLNYDELVVYKEEAALPTHLIVYALH 449
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI) HSP 1 Score: 273 bits (698), Expect = 3.320e-83 Identity = 132/230 (57.39%), Postives = 161/230 (70.00%), Query Frame = 1
Query: 739 ERHVDRTFRGGTTSADDFQLSVLTNRHPDYLSLKEQFFDAWAKPTDVSVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGGPCGESTCNVCSICTHGFRLRDNVGATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEKTDRSGKKVRCMFLSSVAIGRALTTMRGRFEPDENLCPPPGFDSVVGEPGVDLNYPEMVVYREEAALPTHLVVYTL 1428
+ HV++TFRGGTT A DF LS L+ HP Y SL QF W KP V RI +VKVP+DI +KT + GN++R FHGTSCS C FFVDL+G PC CNVC+ICTHGF LRDNV TARR N+ R+GEGLYFSSVSGK+NDYA+ SEK GKKVRCMF+++V G A T +G D +CPP G+DSVVGE G L + E+V Y +EAA+P++L+VY L
Sbjct: 5 QSHVEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKPGVPRVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSLGQD--MCPPAGYDSVVGEVGSGLIHDELVAYEDEAAIPSYLIVYAL 232
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI) HSP 1 Score: 248 bits (632), Expect = 1.610e-72 Identity = 144/366 (39.34%), Postives = 181/366 (49.45%), Query Frame = 1
Query: 259 VHNYCGRRHADLAAAXXXXXXXXDDVVEVTPAPVRTKGEAECRLEGCRELVYRDPVTAVESEYCSNRHYVMGAALLNRECIRDXXXXXXXVDEDTGDVLDYCGSLCAKKVGMPHLVGQGECSLPGCVIPNLVHPRTQREMGYCGEDHRLRATQRSLGPNPERHVDRTFRGGTTSADDFQLSVLTNRHPDYLSLKEQFFDAWAKPTDVSVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGGPCGESTCNVCSICTHGFRLRDNVGATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEKTDRSGKKVRCMFLSSVAIGRALTTMRGRFEPDENLCPPPGFDSVVGEPGVD 1356
+H++C + HA+ A A P G +EC+L+GC + VYRDPVT +ES+YCS H AL GQG ++ HV + FRGGTT A DF LSVL+ H Y SL QF W K V+RI +VKVP DI K + GN++R FHGTSCS C FFVDL+G PC CNVC+ICT+GF L+ NVG TA+RT+ LR+GEGLYFSSVSGK+NDYA+ SEK GKKVRCMF+++V G A T + +N+CPP G DSVVGE ++
Sbjct: 1 MHDFCSKHHANEAMAR----------------PGGGMGASECKLKGCSKNVYRDPVTGLESDYCSRGHQAHAIAL-----------------------------------------GQGMRTVTS-------------------------------------HVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVKGGVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSL--GQNMCPPAGHDSVVGEAPIE 270
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE) HSP 1 Score: 217 bits (553), Expect = 4.180e-62 Identity = 110/216 (50.93%), Postives = 143/216 (66.20%), Query Frame = 1
Query: 796 LSVLTNRHPDYLSLKEQFFDAWAKPTD---VSVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGG--PCGESTCNVCSICTHGFRLRDNVGATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEKTDRSGKKVRCMFLSSVAIGRALTTMRGRFEPDENLCPPPGFDSVVGEPGVDLNYPEMVVYREEAALPTHLVVYTL 1428
L +L +Y +L+ F W KP VS++R++ ++V ++R K ER+ G GNL + FHGTSC++ C F VD +GG PCG+S+C+VC+IC GF+L NV TAR T LR+GEG+Y +SVSGKANDYA S K ++RCMF++SVA+GRA T R N CPPPG+ SVVGE G LN+ E VVY EEAALPTHL+VY L
Sbjct: 17 LQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLP--ANQCPPPGYQSVVGEVGQGLNFDEFVVYNEEAALPTHLIVYAL 230
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI) HSP 1 Score: 216 bits (550), Expect = 3.240e-59 Identity = 124/257 (48.25%), Postives = 155/257 (60.31%), Query Frame = 1
Query: 691 EDHRLRATQRSLGPNPERHVDRTFRGG-TTSADDFQLSVLTNRHPDYLSLKEQFFDAWAKP---TDVSVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGG--PCGESTCNVCSICTHGFRLRDNVGATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEKTDRSGKKV-----RCMFLSSVAIGRALTTMRGRFEPDENLCPPPGFDSVVGEPGVDLNYPEMVVYREEAALPTHLVVYTL 1428
ED R AT+ N E RT RG + L L + +L + F W KP VS+ RIF ++V ++R K ER+ G+ GNL + FHGTSC++ C F VD +GG PCGES+C+VC+IC GF+L NV TAR T F LR+G G+Y +SVSGKANDYA RS KKV RCMF++SVA+G T R D+ CPPPG+ SVVGE G LN+ E VVY+EEAALPTHL+VY L
Sbjct: 178 EDWRENATEDERKKNVEHEQRRTSRGVLSVGFSGSFLQRLEGNGAECKALCDLFNARWIKPRPENGVSIVRIFSIQVSREVREKHERYKGKFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGESSCSVCNICKLGFQLGPNVARTARATRFPLRYGAGIYLTSVSGKANDYAS------RSAKKVGELELRCMFVASVALGNTFKTTSARLPADQ--CPPPGYHSVVGEAGQRLNFDEFVVYKEEAALPTHLIVYAL 426
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Match: D8LS85_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS85_ECTSI) HSP 1 Score: 213 bits (541), Expect = 3.130e-58 Identity = 136/364 (37.36%), Postives = 187/364 (51.37%), Query Frame = 1
Query: 382 CRLEGCRELVYRDPVTAVESEYCSNRHYVMGAALLNRECIRDXXXXXXXVDEDTGDVLDYCGSLCAKK--------VGMPHLVGQGECSLPGCVIPNLVHPRTQREMGYCGEDHRLRATQRSLGPNPERHVDRTFRGGTTSADD---FQLSVLTNRHPDYLSLKEQFFDAW--AKPT-DVSVKRIFKVKVPEDIRRKTERHMGQVGNLKRLFHGTSCSDMCTFFVDLRGGPCGESTCNVCSICTHGFRLRDNVG---ATARRTNFTLRFGEGLYFSSVSGKANDYAEFSEKTDRSGKKVRCMFLSSVAIGRALTTMRGRFEPDENLCPPPGFDSVVGEPGVDLNYPEMVVYREEAALPTHLVVY 1422
C+L GC+E + +P T SEYCS +H + REC R + G L +C C + V L + C LPGC L T R + +C E HR+ QR+ P + + + D+ +L L HP++ SL +QF W +KP V V + K++VP ++R + E + V N++R FHGT S +C F+V G C C +C+IC GF++ DNVG A +R + L +G+GLYFSSVSGKAND++ +EK G VRCM ++ VA G+A T F E PP G++SVVGE G LNY E+VVY AALPTH VVY
Sbjct: 2 CQLPGCKEPAHFNPNTGKASEYCSMKHVHEAKS---RECARSECSRTAFLANTAG--LQFCSRACVNEALGETTSTVLNQTLDDETNCGLPGCQQKALPGG-TWRSLRFCSEAHRILFVQRTPVPFGQPSAEPYTTQVVVARDNTSALELRFLDEGHPEHKSLADQFTSKWLHSKPKLGVEVLNVVKIEVPREVRERHEDYKTMVPNVRRRFHGTFSSRICRFYVG--GSMCLRPDCGLCNICMRGFKIEDNVGHSPARGKRRQW-LMYGKGLYFSSVSGKANDFSAETEKLATDGTTVRCMLVADVAAGKAFVTTEKYFPQMER--PPLGYNSVVGEVGPHLNYDELVVYDPAAALPTHFVVY 354 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1056.771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1056.771.1 >prot_S-firma_F_contig1056.771.1 ID=prot_S-firma_F_contig1056.771.1|Name=mRNA_S-firma_F_contig1056.771.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=479bp MATFASPQRVCSLPGCAQPCFQDQDGIVHSYCSRTCSNDALARAKWASLAback to top mRNA from alignment at S-firma_F_contig1056:2352..8237+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1056.771.1 ID=mRNA_S-firma_F_contig1056.771.1|Name=mRNA_S-firma_F_contig1056.771.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=5886bp|location=Sequence derived from alignment at S-firma_F_contig1056:2352..8237+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1056:2352..8237+ >mRNA_S-firma_F_contig1056.771.1 ID=mRNA_S-firma_F_contig1056.771.1|Name=mRNA_S-firma_F_contig1056.771.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2874bp|location=Sequence derived from alignment at S-firma_F_contig1056:2352..8237+ (Sphaerotrichia firma ET2_F female)back to top |