mRNA_S-firma_F_contig1054.751.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: D7G4L5_ECTSI (NDK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L5_ECTSI) HSP 1 Score: 604 bits (1558), Expect = 6.330e-215 Identity = 315/401 (78.55%), Postives = 344/401 (85.79%), Query Frame = 1
Query: 1 MERKEVVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKKETELATKIADCIRDGQLVPSSTMVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELVSHRVRRFFRGCRLVDHLERTLALIKPDAVGSGNAGDIIARAEKEGFVVVGKIDGRTWSREDAEVFYAEHKDKPFFDTLVGFMSSGPIVQICLEKVNAIKAWRELTGPTNAADAKTAEPSSIRALYGTDGTKNAVHGSDSFASALREVNFCFNSAAEGAAVAAARLDTGDEMGQEE------GSAVGGPKYXXXXXXXXXXATEEKTLALVKPGVSELHSGE 1185
MER EVVFVLGGPGSGKGTHCARIA+EFGYTHLSTGDLLREEQKKE+ELATKIA+CIRDGQLVPSSTMVAL+KEAILNGDS RFLLDGFPRSKDNLEAWFDAFSD E++VSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVE+L+ LGMVRKVSTVPARELV+HRVRR+F+GCRLVD +ERTLALIKPDA +GN +I+ R E+EGFVVVGKI+GR WS++DA FY+EH K FFDTLV FMSSGPIVQ+CLEKV AIKAWREL GPTN+ DAKT EPSSIRALYGT GTKNAVHGSDSFASALRE+NFCF+ A E AAV A +T G E+ GS GG A EE+TLAL+KPG+SELHSGE
Sbjct: 1 MERNEVVFVLGGPGSGKGTHCARIAAEFGYTHLSTGDLLREEQKKESELATKIAECIRDGQLVPSSTMVALLKEAILNGDSKRFLLDGFPRSKDNLEAWFDAFSDEEIQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEELRRLGMVRKVSTVPARELVAHRVRRYFKGCRLVDPVERTLALIKPDA--TGNTNEILNRVEQEGFVVVGKIEGRVWSQQDAATFYSEHSGKAFFDTLVDFMSSGPIVQLCLEKVGAIKAWRELAGPTNSTDAKTLEPSSIRALYGTCGTKNAVHGSDSFASALREINFCFDQAGEAAAVVAPAEETAPAGGAEQNINGRDGSVDGG-------YNEDGFAKEERTLALLKPGISELHSGE 392
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: A0A6H5KI40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI40_9PHAE) HSP 1 Score: 445 bits (1145), Expect = 5.210e-151 Identity = 227/290 (78.28%), Postives = 254/290 (87.59%), Query Frame = 1
Query: 202 MVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELVSHRVRRFFRGCRLVDHLERTLALIKPDAVGSGNAGDIIARAEKEGFVVVGKIDGRTWSREDAEVFYAEHKDKPFFDTLVGFMSSGPIVQICLEKVNAIKAWRELTGPTNAADAKTAEPSSIRALYGTDGTKNAVHGSDSFASALREVNFCFNSAAEGAAVAAARLDTGDEMGQEEGS 1071
MVAL+KEAIL GDS RFLLDGFPRSKDNLEAWFDAFSD E++VSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPV E+L+ LGMVRKVSTVPA+ELV+HRV R+F+GCRLVD +ERTLALIKPDA +GN G+I+ R E+EGFVVVGKI+GR WS++DA FY+EH+ K FFDTLV FMSSGPIVQ+CLEKV AIKAW+EL GPTN+ DAKT EPSSIRALYGT GTKNAVHGSDSFASALRE+NFCF+ A + AAV A +T G E+ S
Sbjct: 1 MVALLKEAILKGDSKRFLLDGFPRSKDNLEAWFDAFSDEEIQVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVFEELERLGMVRKVSTVPAQELVAHRVSRYFKGCRLVDPVERTLALIKPDA--TGNTGEILNRVEQEGFVVVGKIEGRMWSQQDAATFYSEHRGKAFFDTLVDFMSSGPIVQLCLEKVGAIKAWKELAGPTNSTDAKTLEPSSIRALYGTCGTKNAVHGSDSFASALREINFCFDQAGKAAAVVAPAEETAPAGGAEQKS 288
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: A0A6V1RU54_HETAK (UMP-CMP kinase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RU54_HETAK) HSP 1 Score: 337 bits (865), Expect = 7.330e-106 Identity = 175/331 (52.87%), Postives = 227/331 (68.58%), Query Frame = 1
Query: 1 MERKEVVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKKETELATKIADCIRDGQLVPSSTMVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELVSHRVRRFFRGCRLVDHLERTLALIKPDAVGSGNAGDIIARAEKEGFVVVGKIDGRTWSREDAEVFYAEHKDKPFFDTLVGFMSSGPIVQICLEKVNAIKAWRELTGPTNAADAKTAEPSSIRALYGTDGTKNAVHGSDSFASALREVNFCF 993
+ + +V+FVLGGPGSGKGT CA + ++G+ HLS GDLLREE+++ A I + IR+G++VP V L+K A+ +FL+DGFPRS DN E WF D +V VS LF CP+E + +RLL+RGE+SGR DDN+E + KRF TF +S+PVVE + LG+VR+VS+V ++V +VR+ G L +RTLA+IKPDAV +G A +I+ R + EGFVVV + + T SR E FYAEHK K FF+TL GFM+SGP+ +CLEK A+K WR L GPTN AK P S+RALYGTDGT NA HGSDS SALRE+ F F
Sbjct: 212 LTKPQVIFVLGGPGSGKGTQCANLVRDYGFVHLSAGDLLREERQRGGPNAELIENYIREGKIVPVEITVGLIKAAMEQSGGRKFLVDGFPRSLDNTEGWFAVMGD-DVAVSMVLFFDCPEEVMTQRLLKRGESSGRIDDNIEAIQKRFRTFRDQSMPVVENFRRLGLVREVSSVAPVDVVYSKVRQLLDGLALCPPRQRTLAMIKPDAVRAGKADEIVQRLQAEGFVVVARKEA-TLSRAQVEEFYAEHKGKSFFETLAGFMTSGPMQALCLEKEGAVKGWRALMGPTNTEKAKAEAPQSLRALYGTDGTMNATHGSDSTFSALRELAFHF 540
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: A0A835YVW4_9STRA (UMP-CMP kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVW4_9STRA) HSP 1 Score: 329 bits (843), Expect = 1.510e-102 Identity = 175/331 (52.87%), Postives = 224/331 (67.67%), Query Frame = 1
Query: 1 MERKEVVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKKETELATKIADCIRDGQLVPSSTMVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELVSHRVRRFFRGCRLVDHLERTLALIKPDAVGSGNAGDIIARAEKEGFVVVGKIDGRTWSREDAEVFYAEHKDKPFFDTLVGFMSSGPIVQICLEKVNAIKAWRELTGPTNAADAKTAEPSSIRALYGTDGTKNAVHGSDSFASALREVNFCF 993
+ R VVFVLGGPGSGKGT CA I EFGYTHLS GDLLREEQ +++ I I++G++VP + L+K A+ + FL+DGFPRS +N+E WF D +V+F LF CP+E + +RLL+RG TSGRADDN ++ KRF TF S+PVVE L LG VR VS P E+V RV RFF+G ++ ERTLA+IKPDA+ +G+ +I R E+EGFV+V K T + E + FY EH KPFF+ L FM+SGP + LE+V+AI+AWR L GPTN A+ +P S+RALYGTDG +NA HGSDS ASA+RE+ F F
Sbjct: 212 IRRYSVVFVLGGPGSGKGTQCANIVREFGYTHLSAGDLLREEQNCGSDVGEMIKTFIKEGKIVPVEVTIRLLKTAMERSGARDFLIDGFPRSFENMEGWFKEMGD-VAEVAFVLFFDCPEEVMAERLLKRGATSGRADDNEASIRKRFVTFRDTSMPVVEALARLGKVRIVSAAPPPEVVFARVSRFFKGLAMIPPTERTLAIIKPDAMAAGSEPAMIQRLEQEGFVIVEKKT-ETLTSEKVDGFYQEHIGKPFFEGLKKFMTSGPCTALSLERVDAIRAWRNLLGPTNTEKARAEKPDSLRALYGTDGQRNAAHGSDSTASAIRELAFWF 540
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: F6UHS2_CIOIN (UMP-CMP kinase n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6UHS2_CIOIN) HSP 1 Score: 181 bits (458), Expect = 1.760e-51 Identity = 92/189 (48.68%), Postives = 127/189 (67.20%), Query Frame = 1
Query: 1 MERKEVVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKK-ETELATKIADCIRDGQLVPSSTMVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELVSHRVRRFF 564
M + ++VFVLGGPG+GKGT C++I FGYTHLS GDLLR E+K +++ T I CI++G++VP L+K AI + +FL+DGFPR+KDNL+ W + D +V V F L+L CP+E KR+L RG TSGR DDNVE++ KRF T+ E+LP+++ + G VR V T + V RVR+ F
Sbjct: 24 MSKPQIVFVLGGPGAGKGTQCSKIVETFGYTHLSAGDLLRAERKNPSSKVGTLIERCIKEGKIVPVKITCGLLKTAIFANKNTKFLIDGFPRNKDNLDGWDEEMGD-KVDVQFILYLDCPEEVCTKRILNRGLTSGRTDDNVESLKKRFQTYVNETLPIIKHYEKDGKVRSVVTDCTPDEVFERVRKHF 211
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: H2ZHH9_CIOSA (UMP-CMP kinase n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZHH9_CIOSA) HSP 1 Score: 179 bits (453), Expect = 5.080e-51 Identity = 88/188 (46.81%), Postives = 133/188 (70.74%), Query Frame = 1
Query: 4 ERKEVVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKK-ETELATKIADCIRDGQLVPSSTMVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELVSHRVRRFF 564
++ ++VFVLGGPG+GKGT CA+I +FGYTHLS GDLLR E+K E+E+ I I +G++VP L+++AI + ++++FL+DGFPR++DNL W D D +V+V F L+L CPKE +R+L RG+TSGR+DDNVE++ KRF+T+ E++P+++ + VR V T + + V RV++ F
Sbjct: 4 KKPQIVFVLGGPGAGKGTQCAKIVEKFGYTHLSAGDLLRAERKNPESEVGNLIETYITEGKIVPVKITCGLLEKAISSSENNKFLIDGFPRNEDNLTGWSDQMGD-KVEVKFVLYLDCPKEICTERILNRGKTSGRSDDNVESLHKRFETYVNETIPIIKHYEAENKVRHVLTEVSADEVFERVKKHF 190
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: UPI0009E5DDD4 (UMP-CMP kinase-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5DDD4) HSP 1 Score: 178 bits (451), Expect = 1.990e-50 Identity = 84/184 (45.65%), Postives = 127/184 (69.02%), Query Frame = 1
Query: 16 VVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKKETELATKIADCIRDGQLVPSSTMVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELVSHRVRRFFR 567
V+FVLGGPG+GKGT C RI EFGY HLS GDLLREE+ +E I CI++G++VP ++L+++A+ +FL+DGFPR++DNL+ W + +V VS LF C ++E KR++ERG++SGR+DDN+E++ KRF T+E +++P++E Q LG+VRK+ + + + V V+ R
Sbjct: 27 VIFVLGGPGAGKGTQCERIVEEFGYIHLSAGDLLREERASGSENGDLIESCIKEGKIVPVEITISLIEKAMNKNSVKKFLIDGFPRNEDNLQGW-KRVMEGKVDVSCVLFFECAEDECIKRIMERGKSSGRSDDNIESLRKRFYTYETQTMPIIEHYQKLGLVRKIQAIKSPDEVFEEVQSVLR 209
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: W4G8P5_9STRA (UMP-CMP kinase n=6 Tax=Aphanomyces TaxID=100860 RepID=W4G8P5_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.980e-49 Identity = 85/178 (47.75%), Postives = 124/178 (69.66%), Query Frame = 1
Query: 7 RKEVVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKKETELATKIADCIRDGQLVPSSTMVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELV 540
R +V+FVLGGPGSGKGT C++I ++FG+ HLS GDLLREE+ + I IRDG +VP + L+++A+L D FL+DGFPR+ DNLE W +D V V+ LF CP+EE++KRLLERG+TSGR DDN++ + KRF T+ + ++P++E L V ++S++P+ ++V
Sbjct: 7 RSKVLFVLGGPGSGKGTQCSKIVAKFGFVHLSAGDLLREERSSGSPNGDMIDRMIRDGAIVPVKVTLDLIRKAMLESGRDLFLIDGFPRNFDNLEGWEAEMTD--VDVAGVLFYDCPEEEMEKRLLERGKTSGRTDDNIDAIRKRFTTYLESTMPIIEHFALKDQVFRISSIPSPDVV 182
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: A0A7S0M1V9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M1V9_9CRYP) HSP 1 Score: 180 bits (457), Expect = 4.250e-49 Identity = 93/188 (49.47%), Postives = 127/188 (67.55%), Query Frame = 1
Query: 1 MERKEVVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKKETELATKIADCIRDGQLVPSSTMVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELVSHRVRRFF 564
+ + +VVFVLGGPG+GKGT CA I E+G+ HLS GDLLR E++ +E A I I++G++VP V L+ A+ +FL+DGFPRS DN + W+ D + +V+F LF CP+EEL+KRLL+RGETSGR DDN+E++ KRF TF++ S+PVVE GM+R VS+V E V +R F
Sbjct: 169 VPKPQVVFVLGGPGAGKGTQCANIVREYGWVHLSAGDLLRAERESGSENAAMINSFIKEGKIVPVEVTVKLLLAAMEKNPGKKFLIDGFPRSMDNKDGWYSVVGD-KAEVAFCLFYDCPEEELEKRLLKRGETSGRDDDNIESIKKRFRTFKETSMPVVEWFGSRGMLRTVSSVQTVEEVWAATKRVF 355
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Match: A0A7S2C1B9_9STRA (UMP-CMP kinase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1B9_9STRA) HSP 1 Score: 175 bits (443), Expect = 7.080e-49 Identity = 95/198 (47.98%), Postives = 130/198 (65.66%), Query Frame = 1
Query: 4 ERKEVVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKKETELATKIADCIRDGQLVPSSTMVALVKEAILNGDSDRFLLDGFPRSKDNLEAWFDAFSDNEVKVSFTLFLHCPKEELKKRLLERGETSGRADDNVETVLKRFDTFEKESLPVVEQLQLLGMVRKVSTVPARELVSHRVRRFFRGCRLVDHLER 597
+R +VVFVLGGPGSGKGT CARI EFG+ HLS GDLLR E+K +EL I I+ G +VP+ V L+ EA+ ++ FL+DGFPR+ DNLE W + KV F L L CP+E +++RLL+RGETSGR+DDN+E++ KRF T+++ ++PVV+ VR+V + A E V VR C + + LE+
Sbjct: 39 DRPKVVFVLGGPGSGKGTMCARIVEEFGFMHLSAGDLLRAERKSGSELGDMIEGHIQAGSIVPAEVTVRLLDEAMKKSEATCFLVDGFPRNADNLECWVKLMT--HCKVEFVLMLECPEEVMEQRLLKRGETSGRSDDNIESIRKRFKTYKESTMPVVQVFAKENKVREVVSDRAPEEVYADVRTAI--CEVTEPLEQ 232 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1054.751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1054.751.1 >prot_S-firma_F_contig1054.751.1 ID=prot_S-firma_F_contig1054.751.1|Name=mRNA_S-firma_F_contig1054.751.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=403bp MERKEVVFVLGGPGSGKGTHCARIASEFGYTHLSTGDLLREEQKKETELAback to top mRNA from alignment at S-firma_F_contig1054:13163..16776+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1054.751.1 ID=mRNA_S-firma_F_contig1054.751.1|Name=mRNA_S-firma_F_contig1054.751.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3614bp|location=Sequence derived from alignment at S-firma_F_contig1054:13163..16776+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1054:13163..16776+ >mRNA_S-firma_F_contig1054.751.1 ID=mRNA_S-firma_F_contig1054.751.1|Name=mRNA_S-firma_F_contig1054.751.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2418bp|location=Sequence derived from alignment at S-firma_F_contig1054:13163..16776+ (Sphaerotrichia firma ET2_F female)back to top |