mRNA_S-firma_F_contig10519.728.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10519.728.1
Unique NamemRNA_S-firma_F_contig10519.728.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: D7FQB2_ECTSI (Similar to ATP binding / alanine-tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB2_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 3.440e-84
Identity = 130/173 (75.14%), Postives = 145/173 (83.82%), Query Frame = 2
Query:  101 VYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVAGVIYHFGAMLGSPSWP-EVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVE 616
            +Y+ DTY +  EA +LGVVED++QG+A+ILDRTIFHPQGGGQPSD+GTITCG C   V  VRDV GVIYH+G M G+P    E G P SLALD  KRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRG LP GL KDAFIEK N+ELDKLVMA+M T+V+
Sbjct:    1 MYLQDTYLMTSEATVLGVVEDDSQGSAIILDRTIFHPQGGGQPSDEGTITCGDCTVPVSKVRDVGGVIYHYGTMSGTPQPRLEAGRPASLALDSAKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGTLPAGLEKDAFIEKCNSELDKLVMANMETMVK 173          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A6H5JDI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI3_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 3.370e-43
Identity = 76/96 (79.17%), Postives = 82/96 (85.42%), Query Frame = 2
Query:  338 WPEVGW---PVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVE 616
            +P + W   PVSLALD  KRLRHA LHSAGHAVDKAV GAVGAGVFSPLKGYHFDDSPYVEYRG LP GL KDAFIEK N+ELDKLV+A+M TVV+
Sbjct:    5 YPPLSWAGRPVSLALDSAKRLRHAVLHSAGHAVDKAVAGAVGAGVFSPLKGYHFDDSPYVEYRGTLPAGLEKDAFIEKCNSELDKLVVANMETVVK 100          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A2D9ITL3_9FLAO (AA_TRNA_LIGASE_II_ALA domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2D9ITL3_9FLAO)

HSP 1 Score: 125 bits (313), Expect = 5.550e-32
Identity = 74/171 (43.27%), Postives = 104/171 (60.82%), Query Frame = 2
Query:   92 TQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVA-GVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADM 601
            T+ +Y+ DTY    EA    ++ D+  G A++LD+TIF+PQGGGQPSD G I C   +F V  VR    G++ H+G    S  W E G  V L +D  KRL HA +HSAGH +D AV  ++G    SP KG+HF + PYVEY G+L D     ++I  L  ++++LV+ D+
Sbjct:    2 TELIYLQDTYLSTLEARAQELICDDF-GEALVLDKTIFYPQGGGQPSDSGEIVCDTFVFEVSKVRLTNDGLVMHYGEF-SSGGWVE-GLAVELKIDAVKRLVHAKVHSAGHLLDCAV-SSLGLNQLSPTKGFHFPEGPYVEYEGILEDS---SSWIAPLEKKINELVLQDL 165          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A835Z9X7_9STRA (Alanyl-tRNA editing protein AlaX-M-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.130e-31
Identity = 76/180 (42.22%), Postives = 102/180 (56.67%), Query Frame = 2
Query:   89 ATQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITC-GPCIFSVGMVRDVAGVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVETGQ 625
            +T+R+Y+ DTY     A ++ V +D     AV+LDRT+FHPQGGGQP+D+GT+       F V  V+    VI HFG         + G  V  ++D  +RL+ A LHSAGHA+D AV  A G     P KGYHF+D PYVEY G L     +   ++KLN EL  L+ A + T V   +
Sbjct:    3 STERLYLQDTYSHACSARVVEVRDD-----AVVLDRTVFHPQGGGQPTDRGTLKIHNEVAFVVANVKADGDVILHFGQHGEGDKKLQTGDEVEASIDLQRRLQLARLHSAGHALDAAVRNA-GFAALKPTKGYHFEDGPYVEYEGALSAD-DRATLVDKLNAELALLIEAAIETAVRQSE 175          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A7S1TVS7_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 6.650e-31
Identity = 78/184 (42.39%), Postives = 107/184 (58.15%), Query Frame = 2
Query:   92 TQRVYMLDTYKLVDEAVLLGVV------EDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVAGVIYHFGAMLG----SPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVV 613
            T+R+Y+LDTY    +A  L V       +D+A   AVILDRT+FH QGGGQP+D GTIT    +F V  VR     ++HFG+  G    +P+    G  V L++D  KR+ HA  HSAGHA+D AV    G    +  KGYHF D PYVEY G L   + K+  ++ LN ++ +++  D+ T V
Sbjct:   28 TERLYLLDTYLFEADAAALSVEALEPNPKDDATH-AVILDRTVFHAQGGGQPADLGTITADGAVFEVTGVRSAGDAVHHFGSFRGGDGDAPAAFAAGAAVHLSVDEVKRVAHARCHSAGHALDVAVARIFGEDWVAG-KGYHFLDGPYVEYIGKLAPEM-KETIVDTLNEKIAEVLSEDIPTEV 208          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A2M7QBX6_9BACT (AA_TRNA_LIGASE_II_ALA domain-containing protein n=1 Tax=Candidatus Roizmanbacteria bacterium CG_4_10_14_0_8_um_filter_39_9 TaxID=1974829 RepID=A0A2M7QBX6_9BACT)

HSP 1 Score: 119 bits (299), Expect = 8.180e-30
Identity = 71/167 (42.51%), Postives = 103/167 (61.68%), Query Frame = 2
Query:   89 ATQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVAGVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLV 589
            AT+ +YM D+YKL D A+ + +++ E   TA+ILD+TIF+PQGGGQP D GTIT    +FSV  VR   G +YH G    +    E G  V+L +DG +R  +   H+AGH +D A+   +G  + +P KGYHF D  YVEY G++ D   K+    K+  E+++L+
Sbjct:    4 ATELLYMDDSYKLQDSAIYIDIIQTEGGKTALILDQTIFYPQGGGQPYDLGTITQEGNVFSVEEVRFKDGNVYHIGKF--TQGVIEKGAQVTLHVDGERRKFNRRNHTAGHLIDVAIKN-LGLSL-TPAKGYHFPDGAYVEYIGLM-DEAQKEELKSKIEAEVNRLI 165          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A7S2WSC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSC3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.920e-29
Identity = 74/183 (40.44%), Postives = 106/183 (57.92%), Query Frame = 2
Query:   53 AAPKAQ-PPSLFPATQRVYMLDTYKLVDEAVLLGVVE-DEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRD--VAGVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLV 589
            A P +Q PP     T ++Y+ DTY+    AV++ V    E+    VILD+T+FHPQGGGQP+D+G ++     F V MV++    G+++HFG+M       E G  V   +D   R   + LHSAGHA+D A+     +G+ +P KGYHF D+PYVEY G L     KD+  E+L  EL  ++
Sbjct:   34 AGPASQDPPPSGLGTNKLYLADTYRTETPAVVVEVEPVPESGDLKVILDKTVFHPQGGGQPADKGVLSFPGGEFRVSMVKEDRSTGLVFHFGSMGSGSGSLEAGTEVDARIDPEWRSVCSRLHSAGHAMDAAMTALAVSGL-TPTKGYHFPDAPYVEYAGTLA-AEEKDSLQERLTNELQSII 214          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A7S2G7E6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2G7E6_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 5.340e-29
Identity = 80/196 (40.82%), Postives = 109/196 (55.61%), Query Frame = 2
Query:   50 AAAPKAQPPSLFPATQRVYMLDTYKLVDEAVLLGVVED-EAQGTAVILDRTIFHPQGGGQPSDQGTITC--GPCIFSVGMV-RDVAGVIYHFGAMLGSPSWP--EVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVET 619
            A+   ++P S  P T+ +Y  DTY     A +L +  D +  G +V LDRT FHPQGGGQP+DQGTI+   G   F+V MV +D AGV+ H G     P  P  +VG  V+  +D   R ++A +HSAGH +D A+  A       P KGYHF    YVEY G L +   +DA + KL   +D+L+   + T V T
Sbjct:    6 ASVAASEPASNLPPTEALYQTDTYLFTASATVLAIGPDAKGTGWSVKLDRTCFHPQGGGQPADQGTISACEGGGTFAVSMVSKDKAGVVSHDG-----PEEPSLKVGDSVTCTVDEASRRKNARVHSAGHLIDVAMTNAKCN--LRPTKGYHFTPGSYVEYDGKL-EAAERDALLPKLQASMDELIGQALPTKVLT 193          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: A0A2H0SAS6_9BACT (AA_TRNA_LIGASE_II_ALA domain-containing protein n=1 Tax=Candidatus Peregrinibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_36_19 TaxID=1974784 RepID=A0A2H0SAS6_9BACT)

HSP 1 Score: 115 bits (288), Expect = 2.900e-28
Identity = 70/171 (40.94%), Postives = 102/171 (59.65%), Query Frame = 2
Query:   92 TQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVR-DVAGVIYHFGAMLGSPSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADM 601
            T+ +Y+ DTY    EA +  +   E +G A+ILD+TIF+PQGGGQP+D G IT    +F+V  VR D  GV+YHFG        P  G  V+L +D  +R+ +A LHSAGH + +AV      G+  P+KG+HF + PYVEY G L +      +I ++   +++LV  D+
Sbjct:    2 TKLIYLEDTYLFESEAEVKEIKNTE-KGLAIILDQTIFYPQGGGQPTDHGKITTENVVFNVADVRLDEDGVVYHFGNFQNGTIKP--GEKVTLKVDKERRINNAKLHSAGHLIAEAVKKLEIPGI-KPVKGFHFPEGPYVEYEGTLEN---PQEYIPEIEKTVNELVEEDI 165          
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Match: V4LWR5_EUTSA (AA_TRNA_LIGASE_II_ALA domain-containing protein n=4 Tax=Brassicaceae TaxID=3700 RepID=V4LWR5_EUTSA)

HSP 1 Score: 115 bits (288), Expect = 4.620e-28
Identity = 72/175 (41.14%), Postives = 100/175 (57.14%), Query Frame = 2
Query:   83 FPATQRVYMLDTYKLVDEAVLLGVVEDEAQGTAVILDRTIFHPQGGGQPSDQGTI--TCGPCIFSVGMVRDVAGVIYHFGAMLGSPSWP----EVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKGYHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLV 589
            FP T+ VY +D + L  +A  L + + +   TA+ILD T+FHPQGGGQPSD G I  T     FSV  VR   G++ H+G   GS        E G  V L +D  +R  ++ LHSAGH +D  +   VG G   P KGYHF D P+VEY+G+LP  + +    ++L  E ++L+
Sbjct:    3 FPPTKLVYHVDMFNLQSQARFLSLFKAQDGRTALILDSTVFHPQGGGQPSDTGFIVFTGSDSKFSVQDVRSKDGIVLHYGVFEGSNPESGMNIEEGQEVHLIVDESRRKLNSRLHSAGHLLDLCMQ-KVGLGHLEPGKGYHFPDGPFVEYKGILPQDVLQ-VKQKELEAEANELI 175          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10519.728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB2_ECTSI3.440e-8475.14Similar to ATP binding / alanine-tRNA ligase n=1 T... [more]
A0A6H5JDI3_9PHAE3.370e-4379.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2D9ITL3_9FLAO5.550e-3243.27AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]
A0A835Z9X7_9STRA3.130e-3142.22Alanyl-tRNA editing protein AlaX-M-like protein n=... [more]
A0A7S1TVS7_9STRA6.650e-3142.39Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A2M7QBX6_9BACT8.180e-3042.51AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]
A0A7S2WSC3_9STRA3.920e-2940.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G7E6_9EUKA5.340e-2940.82Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A2H0SAS6_9BACT2.900e-2840.94AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]
V4LWR5_EUTSA4.620e-2841.14AA_TRNA_LIGASE_II_ALA domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10519contigS-firma_F_contig10519:389..2480 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FQB2
PFAMstRNA-synt_2c,tRNA_SAD
Max annot lvl2759|Eukaryota
Evalue3.83e-85
EggNOG OGsCOG2872@1|root,2S23F@2759|Eukaryota
Ec32 ortholog descriptionSimilar to ATP binding / alanine-tRNA ligase
Ec32 orthologEc-01_006770.1
DescriptionThreonyl and Alanyl tRNA synthetase second additional domain
COG categoryS
Hectar predicted targeting categoryother localisation
Exons5
Model size625
Cds size594
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10519.728.1prot_S-firma_F_contig10519.728.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10519 420..2480 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815587.9213154-UTR-S-firma_F_contig10519:388..4191622815587.9213154-UTR-S-firma_F_contig10519:388..419Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10519 389..419 +
1696949436.7296448-UTR-S-firma_F_contig10519:388..4191696949436.7296448-UTR-S-firma_F_contig10519:388..419Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10519 389..419 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815587.9387474-CDS-S-firma_F_contig10519:419..5221622815587.9387474-CDS-S-firma_F_contig10519:419..522Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 420..522 +
1696949436.7427547-CDS-S-firma_F_contig10519:419..5221696949436.7427547-CDS-S-firma_F_contig10519:419..522Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 420..522 +
1622815588.0797849-CDS-S-firma_F_contig10519:915..10201622815588.0797849-CDS-S-firma_F_contig10519:915..1020Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 916..1020 +
1696949436.7531598-CDS-S-firma_F_contig10519:915..10201696949436.7531598-CDS-S-firma_F_contig10519:915..1020Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 916..1020 +
1622815588.0936968-CDS-S-firma_F_contig10519:1317..14241622815588.0936968-CDS-S-firma_F_contig10519:1317..1424Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 1318..1424 +
1696949436.7629263-CDS-S-firma_F_contig10519:1317..14241696949436.7629263-CDS-S-firma_F_contig10519:1317..1424Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 1318..1424 +
1622815588.1043494-CDS-S-firma_F_contig10519:1891..21071622815588.1043494-CDS-S-firma_F_contig10519:1891..2107Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 1892..2107 +
1696949436.7725704-CDS-S-firma_F_contig10519:1891..21071696949436.7725704-CDS-S-firma_F_contig10519:1891..2107Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 1892..2107 +
1622815588.1202996-CDS-S-firma_F_contig10519:2417..24801622815588.1202996-CDS-S-firma_F_contig10519:2417..2480Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 2418..2480 +
1696949436.7906702-CDS-S-firma_F_contig10519:2417..24801696949436.7906702-CDS-S-firma_F_contig10519:2417..2480Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10519 2418..2480 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10519.728.1

>prot_S-firma_F_contig10519.728.1 ID=prot_S-firma_F_contig10519.728.1|Name=mRNA_S-firma_F_contig10519.728.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=198bp
MQEPQKAAAPKAQPPSLFPATQRVYMLDTYKLVDEAVLLGVVEDEAQGTA
VILDRTIFHPQGGGQPSDQGTITCGPCIFSVGMVRDVAGVIYHFGAMLGS
PSWPEVGWPVSLALDGPKRLRHAALHSAGHAVDKAVVGAVGAGVFSPLKG
YHFDDSPYVEYRGVLPDGLTKDAFIEKLNTELDKLVMADMATVVETGQ
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mRNA from alignment at S-firma_F_contig10519:389..2480+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10519.728.1 ID=mRNA_S-firma_F_contig10519.728.1|Name=mRNA_S-firma_F_contig10519.728.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2092bp|location=Sequence derived from alignment at S-firma_F_contig10519:389..2480+ (Sphaerotrichia firma ET2_F female)
CGAGTTGGGTGGCACAGCCAAGTTTGAGTCGATGCAAGAGCCACAAAAGG CAGCGGCCCCGAAAGCGCAGCCACCGAGTCTTTTTCCTGCCACGCAACGG GTGTACATGCTGGACACTTACAAGCTTGTTGATGGTGAGGATTCGCTGGT GGACTTAGGGCAATGTTCATGTGTGCGGTTCATGTATTTAGGTACTCAGT ACTCGGCTGACACATGAATATGAAATGTAAATATATTGATACAGAACTCC GTCCTTGACCGAGCCAAGATCCATCCATGCACCCAGGAACACACAGGAAC ATACCCACAGATGTAACGGGGGTGCCTGAAAATTTTCCCAGGCAGACGTC CTAGGTGTGCACTCTTCCGATCAAACACGACTCCGGAGTCCGTCCACTGG TGTTTGCGTCAAGCATCTTGAGACATACTGCTGTTGGTCTGTGCGATTGC ATGAGACCAACATCTTCTCTCTGTCCCGCGTCTCGTTGAACCTTGAACGG GCTTGCCTCGTTTGTCCCCATCGACAGAGGCGGTTTTGTTAGGGGTTGTT GAAGACGAGGCGCAAGGAACGGCAGTTATCTTGGACCGAACAATATTTCA TCCACAGGGCGGAGGTCAGCCCTCTGACCAAGGTGAGCGATCATGGCTCG ATCATGGCTCTGCCGGGCAGGGCGGAGCAGGGTGAGGGCCGCAGCTTTCT TTGGCCGTCTGTCTGTCTTTGCGTTTATTGGTGCAACAACAACTGCTATT GCCTTCGGTACGTCTGCTTTTCTTGGTCCCGTCGCTTTGTGGAAGAAGTT TTTTAATTCGCGTTCCTGCATTGATGATGTCCAGTGGAACACAACATGCC ACACGTGCATCCGAAACGCTCCTACAGACAACCAACAAGCGGACTCTCTC TCTCTCTATTCATCTACTTGGACGTACAGGAACGATCACGTGCGGGCCAT GCATTTTCAGTGTGGGGATGGTGAGGGATGTGGCGGGAGTCATCTACCAT TTCGGAGCTATGTTGGGGTCGCCCTCTTGGCCGGAGGTAAGCGATCGACA AGTGCACCATAGACTAGGTTAAAGACATGCCCGTCGTCGGAGGTTGGGAC CAACAGGCCAACGGAACAACGCGCGGTTTTCGTGTAGGGTACGCATTCGG TGCAAGCAAGTCAGAAAAACCTTCGATTTCTGCTTCACAGCCGTGCATGA GCTCTCCCGCGAGTCGGAGGATGCTCAAGGGACATTGGTGGACGTTTCTT TGCTTGCCGGCAACCTCACACGCGCAAAGTATCGCTGCTGTTTGTTGTAC GGGGCCGACCCGTCCCGTTTTCCAATACATGCATCAAACAAGTGCAGGCC GGCCGAGCCCATTGTGCGCGAGGTTCTCCTTACCAAAACAGCAGTGTGCG TACTTTTTTTTCGGCTCCAATGCACTTGAGATCTGTAACGCGTGAATGTG AAATATACGTTCTTCGTTCTGCCTTCCGTCTTGGTGGTGCGCCGAGGGGG CAGGTGGGATGGCCGGTGTCCCTCGCGCTGGACGGCCCCAAACGGCTGCG GCACGCCGCGCTGCACTCGGCGGGGCACGCGGTTGACAAGGCCGTGGTCG GGGCGGTCGGCGCGGGCGTGTTCTCGCCCCTCAAGGGCTACCACTTCGAC GACTCGCCGTACGTCGAGTACCGAGGCGTGTTGCCCGACGGCCTGACCAA AGATGCCTTCATCGAAAAGGTAAAGACACCTACCAAAGAGCAGGTGGTTA TGAAGAGACTCAGGAGCAAGAGTCGTGCTTGCTTGAAGATTGGTTTGGAG GTCGGTTCGGTCCTACCGCAGCTGCTGTGTTGTACCTGCACGAGTCAGTC GGGTCGGAGGGTTGGCCTGTTTTACCATATGGCGTGTTTTTTTTCAACTT GTGCTATCCAGCGGAAGCTCTTCATGGCGACCGGGAGGACACACTGACTG CTGTTAATTGTGTGACAGCGCCGCAACTGAGCAACTGGAACCGCCGTGCG CCGATCGTGCTTATATTCACCTAGCGCAGTTGAACACCGAGCTCGACAAG CTCGTGATGGCGGACATGGCGACCGTGGTTGAGACCGGTCAG
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Coding sequence (CDS) from alignment at S-firma_F_contig10519:389..2480+

>mRNA_S-firma_F_contig10519.728.1 ID=mRNA_S-firma_F_contig10519.728.1|Name=mRNA_S-firma_F_contig10519.728.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1188bp|location=Sequence derived from alignment at S-firma_F_contig10519:389..2480+ (Sphaerotrichia firma ET2_F female)
ATGCAAGAGCCACAAAAGGCAGCGGCCCCGAAAGCGCAGCCACCGAGTCT
TTTTCCTGCCACGCAACGGGTGTACATGCTGGACACTTACAAGCTTGTTG
ATGATGCAAGAGCCACAAAAGGCAGCGGCCCCGAAAGCGCAGCCACCGAG
TCTTTTTCCTGCCACGCAACGGGTGTACATGCTGGACACTTACAAGCTTG
TTGATGAGGCGGTTTTGTTAGGGGTTGTTGAAGACGAGGCGCAAGGAACG
GCAGTTATCTTGGACCGAACAATATTTCATCCACAGGGCGGAGGTCAGCC
CTCTGACCAAGAGGCGGTTTTGTTAGGGGTTGTTGAAGACGAGGCGCAAG
GAACGGCAGTTATCTTGGACCGAACAATATTTCATCCACAGGGCGGAGGT
CAGCCCTCTGACCAAGGAACGATCACGTGCGGGCCATGCATTTTCAGTGT
GGGGATGGTGAGGGATGTGGCGGGAGTCATCTACCATTTCGGAGCTATGT
TGGGGTCGCCCTCTTGGCCGGAGGAACGATCACGTGCGGGCCATGCATTT
TCAGTGTGGGGATGGTGAGGGATGTGGCGGGAGTCATCTACCATTTCGGA
GCTATGTTGGGGTCGCCCTCTTGGCCGGAGGTGGGATGGCCGGTGTCCCT
CGCGCTGGACGGCCCCAAACGGCTGCGGCACGCCGCGCTGCACTCGGCGG
GGCACGCGGTTGACAAGGCCGTGGTCGGGGCGGTCGGCGCGGGCGTGTTC
TCGCCCCTCAAGGGCTACCACTTCGACGACTCGCCGTACGTCGAGTACCG
AGGCGTGTTGCCCGACGGCCTGACCAAAGATGCCTTCATCGAAAAGGTGG
GATGGCCGGTGTCCCTCGCGCTGGACGGCCCCAAACGGCTGCGGCACGCC
GCGCTGCACTCGGCGGGGCACGCGGTTGACAAGGCCGTGGTCGGGGCGGT
CGGCGCGGGCGTGTTCTCGCCCCTCAAGGGCTACCACTTCGACGACTCGC
CGTACGTCGAGTACCGAGGCGTGTTGCCCGACGGCCTGACCAAAGATGCC
TTCATCGAAAAGTTGAACACCGAGCTCGACAAGCTCGTGATGGCGGACAT
GGCGACCGTGGTTGAGACCGGTCAGTTGAACACCGAGCTCGACAAGCTCG
TGATGGCGGACATGGCGACCGTGGTTGAGACCGGTCAG
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