mRNA_S-firma_F_contig105.697.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig105.697.1
Unique NamemRNA_S-firma_F_contig105.697.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: A0A6H5KUN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUN2_9PHAE)

HSP 1 Score: 848 bits (2191), Expect = 5.130e-296
Identity = 497/903 (55.04%), Postives = 580/903 (64.23%), Query Frame = 1
Query:   31 AGVGSHIVEVTRTNTVNSSLSSEASPEGGRGGWGVENDPANDPALIVVVREALNDAAMSAIDQMEQEVIAAT-RERSGDWLEAADATCAAIVSQRRQEVREVYHHGRMDGQCLHRSQLTELLPSGMRLCNPSAPSMAAPRAEDERGWLVDSASSLAACRAFFEISDMEFAR---------------------------------AACLRALRLGEMNMSEVTEIDARLAAIAERYGRPSVAVQLYFRMMASPATNDDRRLALSILGLTMVPPTLIGGSLRVIAEFRTAWARDLRKLRRNLVTGATEGELADPVREVGKTPFHLAHQGGPDLEMMASLAGVYDVAAPSLRYVAPHCAGGTNEKGREAAKRRVAG---RPIRLGFFSVYLRDHSIGKMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGGDPVEEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLSLDVELEEGQDDYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMTKPACPSNDTDVYGISLPRAGAAEASTRPNSVS-------------------GEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRDEEWTRVVWTRLRDVLTPR----------------------GDHDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVA---------------------EYVSIAVRLGVDQAFRKEAVIKLQEAYRVALHKHEQSAHEWAAFFVR 2442
            A V S I++   TNT  SSL   ASPEG  G WG    P  D A+ + V +AL+ A     D ME+E++ A+ RE SGDWLEAADATCA +V +RR E+ ++Y  GR+D Q +  SQ +EL   G  LCNPSAP+ AA RA+ +  WL DS +SL ACRAFF++S+ME+A+                                 AACLRA+RLG  +  E  E D RLAAIAERYG PS AV++YF MMA+PATND  RL +SILGLTMVPPTLIG S R IAEFR+ W RDL+ LRRNL TG T GEL DP  EVG+TPF+LAHQGGPDL+MM SLAGVYD AAPSLRYVAPHC     + G + A     G   RP+R+GFFS++LRDHS+GKMM  LI+LLAE P LEVHVFA G  G  G G  SQAG++       DPV   LRS VHHWHQ PR DLH AR  V+QE+LDVLVYPD+GMEPLTYF+SFARLAPVQCVWWGHPVTPSTG++DYFLSLDVEL+ GQDDYLEQMVRMD +NTA+FKQ  A    W  +   P  P         K          P+  LSF   NGG E+      S      K    ++  D+  ISLP A  A A   P + +                   G+    P+C + YLV+ RLFK+HPDFD AI+GIL G   GCV+LIHET+DEEWTRVVW+RLRDVL PR                      G   RLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLE LSNGVPVVTLPAK+VRGRFALAIY+QM YTELVADDV                      EYVS+AV+LG DQ  RK+ V K++ AYR +LH+H QSA EWAAF VR
Sbjct:   78 ATVASRILQAATTNT--SSL--RASPEGEWGDWG----PEGDRAIAIAVEKALSGAGGYVHDLMEEELVTASAREASGDWLEAADATCATLVPRRRLEILDMYRLGRLDIQGVDCSQPSELYSPGTILCNPSAPAAAASRADLKGTWLADSTASLMACRAFFDVSEMEYAKEREAEXXXXXXXXXXXXXXXXXXXXXKQVPKLMAACLRAVRLGGTSADEAAEADMRLAAIAERYGHPSAAVRMYFHMMANPATNDHGRLVVSILGLTMVPPTLIG-SRRTIAEFRSGWVRDLQTLRRNLATGVTPGELWDPAAEVGRTPFNLAHQGGPDLDMMTSLAGVYDAAAPSLRYVAPHC---RRDMGDDKAATTTQGHSERPVRIGFFSIHLRDHSVGKMMGLLIMLLAENPSLEVHVFAPG-GGCDGDGGNSQAGDKEGXXXXXDPVVNGLRSAVHHWHQAPR-DLHSARRVVSQEKLDVLVYPDLGMEPLTYFLSFARLAPVQCVWWGHPVTPSTGSVDYFLSLDVELDGGQDDYLEQMVRMDVVNTAHFKQMAA----WVSDLGLPSGPPGRRDINSDKG---------PQSPLSF--TNGGEESLGTSISS----TIKSFSNADMADILQISLPYADLAAAEAGPTTPAAATTTGVAARTYDEHDVTIGDQEAGPSCRQKYLVMGRLFKLHPDFDVAIKGILEGGKDGCVILIHETKDEEWTRVVWSRLRDVLAPREKNTRIVLQPFLVRPLCVDCAVGLFGRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSNGVPVVTLPAKYVRGRFALAIYQQMGYTELVADDVQVGVVSPQISSGFSELFIIGRQEYVSLAVQLGKDQDLRKKVVAKVEGAYRESLHQHHQSAQEWAAFIVR 947          
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: D7FK50_ECTSI (Putative methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK50_ECTSI)

HSP 1 Score: 762 bits (1967), Expect = 3.360e-266
Identity = 428/738 (57.99%), Postives = 492/738 (66.67%), Query Frame = 1
Query:  331 VYHHGRMDGQCLHRSQLTELLPSGMRLCNPSAPSMAAPRAEDERGWLVDSASSLAACRAFFEISDMEFARAACLRALRLGEMNMSEVTEIDARLAAIAERYGRPSVAVQLYFRMMASPATNDDRRLALSILGLTMVPPTLIGGSLRVIAEFRTAWARDLRKLRRNLVTGATEGELADPVREVGKTPFHLAHQGGPDLEMMASLAGVYDVAAPSLRYVAPHCAGGTNEKGREAAKRRVAGRPIRLGFFSVYLRDHSIGKMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGG----DPVEEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLSLDVELEEGQDDYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMT-KPACPSNDTDVYGISLPRAGAAEASTRPNSVS-------------------GEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRDEEWTRVVWTRLRDVLTPRGD----------HDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVAEYVSIAVRLGVDQAFRKEAVIKLQEAYRVALHKHEQSAHEWAAFFVR 2442
            +Y  GR+D Q +  SQ ++L   G  LCNPSAP+ AA RAE +  WL DS SSL ACRAFF++S+ME+A+AACLRA+RLG  +  E  E+D RLAAIAERYG PS AV +YF MMA+PATND  RL +SILGLTMVPPTLIG S R IAEFR+ W RDL+ LRRNL TGAT GEL DP  EVG+TPF+LAHQGGPDL+MM SLAGVYD AAPSLRYVAPHC     +       +  + RP+R+G                                         GGG G         K GG    DPV   LRS VHHWHQ PR DLH AR AV+QE+LDVLVYPD+GMEPLTYF++FARLAPVQCVWWGHPVTPSTG++DYFLSLDVELE GQDDYLEQMVRMD +NTA+FKQ  A    W  +   P EP     N   K          P+  LSF   NGG E+      S S P T K +  ++  DV  IS+P A  A A   P + +                   GE    P+C   YLV+ RLFK+HPDFDAAIEGIL GD  GCV+LIHET+DEEWTRVVW+RLRDVL PRG             RLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLE LSNGVPVVTLPAK+VRGRFALA+Y+QM YTELVADDV EYVS+AV+LG D+ FR++ V K++ AYR +LH+H QSA EWAAF VR
Sbjct:    1 MYRLGRLDIQGIDCSQPSQLYSPGTILCNPSAPAAAASRAELKETWLADSTSSLMACRAFFDVSEMEYAKAACLRAVRLGGTSADEAAEVDMRLAAIAERYGHPSAAVHMYFHMMANPATNDHGRLVMSILGLTMVPPTLIG-SRRTIAEFRSGWVRDLQTLRRNLATGATPGELWDPAGEVGRTPFNLAHQGGPDLDMMTSLAGVYDAAAPSLRYVAPHCRRDMGDDKAATTNQGHSERPVRIG-----------------------------------------GGGDGDXXXXXXXXKEGGRGGDDPVVNGLRSAVHHWHQAPR-DLHSARRAVSQEKLDVLVYPDLGMEPLTYFLAFARLAPVQCVWWGHPVTPSTGSVDYFLSLDVELEGGQDDYLEQMVRMDVVNTAHFKQMAA----WVSDLGLPSEPPGRRDNNRDKG---------PQSPLSF--TNGGVESL-----STSLPSTIKSSSNADMADVLQISVPYADLAAAEAGPTTPATAATTGVAARTHNEHDVTIGEQDAGPSCRHKYLVMGRLFKLHPDFDAAIEGILEGDKDGCVILIHETKDEEWTRVVWSRLRDVLAPRGRTPSTCMCDGLFGRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSNGVPVVTLPAKYVRGRFALAMYQQMGYTELVADDVQEYVSLAVQLGKDRDFRQKVVTKVEGAYRESLHQHHQSAQEWAAFIVR 675          
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: A0A7S3K439_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K439_9STRA)

HSP 1 Score: 276 bits (706), Expect = 2.610e-78
Identity = 208/622 (33.44%), Postives = 299/622 (48.07%), Query Frame = 1
Query:  598 IDARLAAIAERYGRPSVAVQLYFRMMASPATNDDRRLALSILGLTMVPPTLIGGSLRVIAEFRTAWARDLRKLRRNLVTGATEGELADPVREVGKTPFHLAHQGG-PDLEMMASLAGVYDVAAPSLRYVAPHCAGGTNEKGREAAKRRVAGRPIRLGFFSVYLRDHSIGKMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGGDPVEEALRSRVHHWHQVPRW-DLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLSLDVELEEGQD-DYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMTKPACPSNDTDVYGISLPRAGAAEASTRPNSVSGEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRDEEWTRVVWTRLRDVLTPRGDHD----RLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVAEYVSIAVRLGVDQAFRKEAVIKLQEAYRVALHKHEQSAHEWAAFFVR 2442
            ID  LA+I+  +G+  +A+ LY R++A+   N+   LA  +  +  +PP +         + +     DL +     +      +    +R +G+T FH AH+    ++E+   LA +    AP L  + P        + R    R+V    I++GF S YL +HSIGKM+A+LI  L++    E+++F                          D V + + S V     + R   L +AR ++ + ELD+L+Y D+GME  ++F++F+RLAP+QCVWWGHPVT    +IDYFLSLD E+ + Q   Y EQ++R  ++NTA F Q    L    H             N  R S            LL+  +          PPES                                     SG A         YLVL RLFK+HP FD  +  IL  D  G + LI E +       +W+RL+        +D    R+R +H+W Y + L  AT VLDT+PYGGCLT L+A+SNGVP+VTLP+ F RGRFA +IY QM +T LVA D  +++SI  RLG D  FR +A+  LQ AY   +H     A+EWA FF R
Sbjct:  180 IDLHLASISGVWGQTEIAIALYGRVIAT-TDNELLLLAARLNAILTLPPVVPNDPEAEQIQLKN----DLDQFNFQKIFKTPIKDETILLRHIGRTLFHAAHRCSYHEVEIQKKLATLLQRLAPRLTPIPPAAV-----RRRRVFPRKV----IKIGFVSAYLSEHSIGKMLAELIAQLSQH--FEIYIFHLDQH--------------------SDHVSQFIDSNVAKSQLLDRTLSLQVARDSIIKAELDILIYTDLGMEAWSFFLAFSRLAPIQCVWWGHPVTSGLASIDYFLSLDSEVSDAQSLFYSEQLIRFQYINTAPFVQ--VDLQASAH-------------NIDRNS------------LLTGARFG--------PPES-------------------------------------SGGAI--------YLVLGRLFKLHPKFDDVLLRILDTDPTGIIALIIEPQ-RFILHDLWSRLKKRALFLFGNDLLLRRIRFLHYWKYIEILSIATLVLDTYPYGGCLTALDAMSNGVPLVTLPSTFERGRFAASIYAQMNFTHLVARDADDFISIVTRLGTDATFRDQAIASLQGAYP-QVHHTRDVANEWAKFFTR 683          
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: A0A8J2T266_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T266_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.570e-63
Identity = 199/633 (31.44%), Postives = 273/633 (43.13%), Query Frame = 1
Query:  571 EMNMSEVTEIDARLAAIAERYGRPSVAVQLYFRMMASPATNDDRRLALS------ILGLTMVPPTLIGGSLRVI--AEFRTAWARDLRKLRRNLVTGATEGELADPVREVGKTPFHLAHQ-GGPDLEMMASLAGVYDVAAPSLRYVAPHCAGGTNEKGREAAKRRVAGRPIRLGFFSVYLRDHSIGKMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGGDPVEEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLSLDVELEEGQDDYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMTKPACPSNDTDVYGISLPRAGAAEASTRPNSVSGEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRDEEWTRVVWTRLRDVLTPRGDHDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVAEYVSIAVRLGVDQAFRKEAVIKLQEAYRVALHKHEQSAHEWAAFFVR 2442
            +MN+  V      LA  A   GR         ++  +  + D   LAL+      +L   +VPP      LR +  ++         RK     + G         VR VG+T F+LAHQ G  D E+M  LA     AAPSL    P                R+    ++LGF S +L DHSIGKM+A  ++ LA  P LEV+              G  + +        D V + L   +         D+  AR  V    LDVLV+PD+GME  +Y ++F+RLA VQC WWGHPV+    +IDY+L LD E ++   +Y EQ+VR   +NTA F   R                                                             TP+       N TD+  +S    GA                       YLVL RLFK+H  FD  +  +L  D  G V+L+ E ++    +      R  L      DR+  + +W Y  AL  A  VLDT PYGGCLT L+ALSNGVP+V LP    RGR A +IY+QM  ++ VA + ++YVSIA RLG D A+ + AV +++ +Y  A H+    A EWA  F+R
Sbjct:  229 DMNLGTVLGCWGELALAARLLGRAHARA---LKLAEANQSYDYAALALAARVNAAVLVPPVVPPPHELNDLRNLLRSDLXAXXXXXXRKSAARHIQGDDSSYDEAIVRRVGRTLFNLAHQCGQDDAEIMFLLASTLTRAAPSLVEEVPELP-------------RLQNEVVKLGFASAHLCDHSIGKMLADPLIFLARDPRLEVYALHVAF--------GPPSDD--------DHVRKFLHELLGERSYALSVDVREARKEVISFNLDVLVFPDLGMEIPSYLLAFSRLARVQCAWWGHPVSTGLPSIDYWLGLDTERDDAFQEYSEQLVRFSHVNTAPFHPQRG------------------------------------------------------------TPV-------NRTDL--VSKDPGGAI----------------------YLVLGRLFKVHALFDDMLLDLLERDRTGVVLLVGEPQEPLTIKTYQRIQRRGLERNLKTDRIHFIDYWAYMGALATARVVLDTHPYGGCLTALDALSNGVPLVVLPGPAERGRHAASIYQQMGVSDFVAANQSDYVSIAARLGTDDAYHEAAVARIRASYLDA-HRAGAVAAEWAGAFLR 737          
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: A0A090AA90_9GAMM (TPR repeat-containing protein n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090AA90_9GAMM)

HSP 1 Score: 202 bits (513), Expect = 3.400e-52
Identity = 159/538 (29.55%), Postives = 239/538 (44.42%), Query Frame = 1
Query:  838 ATEGELADPVREVGKTPFHLAHQGGPDLEMMASLAGVYDVAAPSLRYVAPHCAGGTNEKGREAAKRRVAGRPIRLGFFSVYLRDHSIGKMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGGDPVEEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLS-LDVELEEGQDDYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMTKPACPSNDTDVYGISLPRAGAAEASTRPNSVSGEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRDEEWTRVVWTRLRDVLTPRGDHDRLRIMHHWL---YPQALRRATAVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVAEYVSIAVRLGVDQAFRKEAVIKLQEAYRVALHKHEQSAHEWAAFFV 2439
            A++  L  P +E G T F+LA+ G  D  +   LA +Y+   PSL YVAPHC     +K     +R+     I++GF S + ++H+I K+M  ++  L+ +   E+HVF              Q  +E             ++ +  ++  +P   L  AR  +A ++LD+L YPD+GME  TYF++F+RLAPVQC  WGHPVT     IDYF+S +D+E     + Y EQ+VR+    T Y+K                                                        +LPP  P T              +G+       AE+                    Y+    LFK HPDFD  +  ILA D  G V+L+     + WT ++  R +  +      +R+R +       Y   L     +LD  P+GG  T  EA + GVP+VTLP  F+RGRF  A YRQME  + VAD+   YV I ++LG D ++RK    K+   +++ L++  +   E   FF+
Sbjct:  171 ASQFHLDYPEQETGVTNFYLAYHGLNDKTLQIKLAQLYEQVCPSLLYVAPHC----QQKSAPIVQRK-----IKIGFISRFFKNHTIAKVMGGIMANLSREQ-FEIHVFFF-----------PQLMDESAV---------FIQQQADYFETLPLV-LATARQQIADKQLDILFYPDIGMESFTYFLAFSRLAPVQCTTWGHPVTTGIRHIDYFISTVDLETATSDEHYTEQLVRLPSQITFYYKP-------------------------------------------------------DLPPAFPKT-----------RHDFGL-------AES-----------------DHLYICPQALFKFHPDFDEILAEILARDPQGLVILVAGFH-QHWTELLQRRFQQTIPT--VIERIRFLPRMTLSDYFNLLSLVEVMLDPLPFGGGNTSYEAFALGVPIVTLPIPFLRGRFTYACYRQMEIMDCVADNPQHYVDITLKLGTDPSYRKLIQQKILTRHQI-LYEDIRVVRELEQFFL 583          
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: A0A2E4XRJ1_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XRJ1_9PROT)

HSP 1 Score: 197 bits (500), Expect = 2.400e-50
Identity = 150/505 (29.70%), Postives = 225/505 (44.55%), Query Frame = 1
Query:  859 DPVREVGKTPFHLAHQGGPDLEMMASLAGVYDVAAPSLRYVAPHCAGGTNEKGREAAKRRVAGRPIRLGFFSVYLRDHSIGKMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGGDPVEEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLSLD----VELEEGQDDYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMTKPACPSNDTDVYGISLPRAGAAEASTRPNSVSGEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRDEEWTRVVWTRLRDVLTPRGDHDRLRIMHHWLYPQALRRAT---AVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVAEYVSIAVRLGVDQAFRK 2352
            +P+ E   + F LA+ G  D E+   LA +Y  + PSL + +PHC     E  R +  RR+A           +L DHSIG+++  L+  LA     EV +F             S A  +   +R    ++ A+  RV     +PR +L+ AR+ +A+ + DV  +P+VGM+P+TYF++FARLAPVQ V WGHPVT     +DYFLS D     +  +  + Y E +VR+D    +Y                                                                P  P+  PA    D  +                           P  +  Y +   LFK+HPD DAA+  IL GD  G +VL+ E  D  W + V  R  + L  R    R+  +    +   +R  T    VLD++P+ G  T  +A++ GVPVVT P +++RGRF++A + +M  +ELVA D+AE+  IA+RLG D  +R+
Sbjct:  188 NPLAETPASRFFLAYHGSGDRELQERLAALYLASCPSLAWTSPHC----EEDARASGPRRIA-------LVCRFLFDHSIGRLLHGLLRRLAAGSNCEVTIFE------------SAAAPDDAVRR---EIDAAVAGRV----VLPR-ELNAARSCIAEFQADVAFFPEVGMDPMTYFLAFARLAPVQAVTWGHPVTTGVPNMDYFLSCDDAEPADSNDADEQYSETLVRLDGYPFSY----------------------------------------------------------------PRPPVPNPAGARADFAL---------------------------PEDATVYFLAQNLFKIHPDMDAALRRILDGDRKGRLVLL-EGHDPGWGQAVRERFAETL--RDTTSRVVFLERQSHDDYMRLFTLSDVVLDSYPFSGGNTTYQAIAMGVPVVTCPGRYLRGRFSMATFERMGMSELVAGDMAEFADIALRLGTDDGYRR 567          
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: A0A1F7LKE1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium GWA2_70_23 TaxID=1802095 RepID=A0A1F7LKE1_9BACT)

HSP 1 Score: 194 bits (492), Expect = 6.880e-50
Identity = 193/637 (30.30%), Postives = 273/637 (42.86%), Query Frame = 1
Query:  553 RALRLGEMNMSEVTEIDARLAAIAERYGRPSVAVQLYFRMMASPATNDDRRLALSILGLTMVPPTLIGGSLRVIAEFRTAWARDLRKLRRNLVTGATEGELADPVREVGKTPFHLAHQGGPDLEMMASLAGVYDVAAPSLRYVAPHC---AGGTNEKGREAAKRRVAGRPIRLGFFSVYLRDHSIGKMMAQLIVLLAEKPGLEVHVF-ARGLSGGRGGGSGSQAGEEGTEKRGGDPVEEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLS-LDVELEEGQDDYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMTKPACPSNDTDVYGISLPRAGAAEASTRPNSVSGEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRDEEWTRVVWTRLRDVLTPRGD-HDRLRIMHHWL---YPQALRRATAVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVAEYVSIAVRLGVDQAFRKEAVIKLQEAYRVALHKHEQSAHEWAAFF 2436
            +ALRLG     +V E  A L       GR    V  Y R  A     D     +    L ++P +         A    A  R    + R L +G T   L D  R V    F+LA+ G  DL++   LA ++ +A PSL + APHC   AGG +E+             IR+GF S Y   H++ K+   LI  L+ +   EV VF ARG +                     D    +L        ++P  +L+ AR  +A EELD++VYPD+GM+ +TY ++FARLAPVQCV WGHPVT     +DYF+S  ++E +  +D Y E++ R+  L   Y++            P  P +P                                        P+                  +G    R G  + +T                  Y+    LFK+HPDFDA +  +L  D  G VVLI +    +WTR +  R    +   GD  DR++ +       +   LR A A+LD F +GG  +  EAL+ GVP+VT P +F+RGR     YRQM   + VA    EYV IA+RLG D+ +R EAV     A    L +   +  E+ AFF
Sbjct:   15 QALRLG----LDVAEAHANLGNALLNQGRVEEGVASYRRAQA--LKPDPAHEIIIATALPVIPESK--------AHMLAARQRVEENVERLLGSGLT---LTDTSRPVASLAFYLAYHGLDDLDLQRKLARLHLLANPSLGWTAPHCREGAGGVSER-------------IRIGFVSRYFHGHTVTKLTRGLIDTLS-RDRFEVVVFHARGRT---------------------DQSPRSLDQAAVRAIRLPD-NLNEARVRIAGEELDIVVYPDIGMDAMTYLLAFARLAPVQCVTWGHPVTTGIPNVDYFVSSAELEPDGAEDHYSERLHRLSRLPAYYYR------------PPAPTQP----------------------------------------PD------------------HG----RLGFGDDATL-----------------YVCPQSLFKLHPDFDAVLADLLRRDRRGRVVLI-DGLSAQWTRSLCERF---VRSFGDVSDRVQFVSRLSSQSFQNLLRAADALLDPFHFGGGNSTYEALALGVPIVTWPGRFMRGRVTYGCYRQMGVEDCVARSPEEYVEIAIRLGNDREWR-EAVSGRIVAASHQLFEDMAAVREFEAFF 502          
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: A0A2E4XWA5_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XWA5_9PROT)

HSP 1 Score: 196 bits (497), Expect = 2.450e-49
Identity = 173/585 (29.57%), Postives = 251/585 (42.91%), Query Frame = 1
Query:  691 NDDRRLALSILGLTMVPPTLIGGSLRVIAEFRTAWARDLRKLRRNLVTGATEGELADPVREVGKTPFHLAHQGGPDLEMMASLAGVYDVAAPSLRYVAPHCAGGTNEKGREAAKRRVAGRPIRLGFFSVYLRDHSIGKMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGGDPVEEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLSLDV-ELEEGQDDYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMTKPACPSNDTDVYGISLPRAGAAEASTRPNSVSGEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRDEEWTRVVWTRLRDVLTPRGDHDRLRIMHH---WLYPQALRRATAVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVAEYVSIAVRLGVDQAFRKEAVIKLQEAYRVALHKHEQSAHEWAAF 2433
              D R  ++  GL  V P     S   I  +R  + R   +L   LV  + + E      +VG   F+LA+ G  D E M  LA  Y  A P L + APHC     ++GR          PIRLG  S    +H++  M   +  LLA+ P  +  V A   SG            EG   R  D V++ L+            ++  AR  +A E  D+L+Y D+GMEP +YF++F+RLAPVQCV WGHP T    +IDY++S D+ E E+GQ+ Y E +VR+  + + Y +  R+             EP+                                                    PS       I LP  GA                       YL    L K+HP+ DA +  +LA D  G +V+   + D  WTR++  R + V     + +R+ ++       +   +  +  VLDT+P+G   T  +  + GVPVVTLP +++RGR  LA Y  M   + VA   AE+V IA RLG D A+RKE   ++ EA   A+ + E  A  +A F
Sbjct:  238 RPDHRFLVADAGLLPVIPA----SETEIIRWRERFIRKFEELSEGLVPISGDPE------QVGAMNFYLAYHGENDCEHMEQLAAFYAKAFPDLLWTAPHCNSSDKQEGR----------PIRLGVASKNFGEHAVAWM---IFGLLAQLPRDQFSVTAITPSGSN----------EGVSDRISDAVDDVLQIAA---------NITSARQQIADERFDILLYADIGMEPFSYFLAFSRLAPVQCVTWGHPDTTGLRSIDYYISNDIAEPEDGQESYTESLVRLPGVQSWYPRLSRS-------------EPL----------------------------------------------------PSRQD----IGLPSEGAI----------------------YLCPQNLIKIHPEMDANLADLLARDPEGHLVIFGAS-DPNWTRLLLARWKPVFG--RNFERVLVLPRVSLQTFVDTIALSDVVLDTWPFGAGNTNYQTFAMGVPVVTLPGRWIRGRGTLAHYTHMGIDDCVAQSPAEFVEIAHRLGTDHAYRKEIAAQI-EARSDAVLEDEVCADAFAKF 685          
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: A0A2E6QJU9_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QJU9_9PROT)

HSP 1 Score: 189 bits (479), Expect = 9.020e-47
Identity = 164/536 (30.60%), Postives = 226/536 (42.16%), Query Frame = 1
Query:  760 SLRVIAEFRTAWA--RDLRKLRRNLVTGATEG-ELADPVREVGKTPFHLAHQGGPDLEMMASLAGVYDVAAPSLRYVAPHCAGGTNEKGREAAKRRVAGRPIRLGFFSVYLRDHSIGKMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGGDPVEEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLSLDV-ELEEGQDDYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMTKPACPSNDTDVYGISLPRAGAAEASTRPNSVSGEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRDE--EWTRVVWTRLRDVLTPRGDHDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVAEYVSIAVRLGVDQAFR 2349
            +LR+ A + +A A     R+L  N+   AT G  +ADPV EVG T F  A+ G  D  +  ++A +Y  A PSL YVAPHC        R+ A      RP+R+G  S   R++++   +  ++  L     L V +                         GG  V   L + V    +VPR  L  ARTA+A  ELDVLVYP++GM  LTYF++FARLAPVQCV WGHPVT     +DYFLS D  E ++GQ  Y E++VR+  L T Y +    P          PH    L  +                            E A L                                                      Y     LFK+HPDFDA + GIL  D    +V+  +      +  +  W     V   R     +R    +L    L+ +  +LD FP+ G  T  +AL  G P+V+L  K + GR A  ++ +    EL+AD    YV+IA+RLG D A+R
Sbjct:  284 ALRLPAVYASAEALHEARRRLEENIAALATVGLSIADPVAEVGITNFRAAYHGLDDRPLQEAIARLYLKACPSLAYVAPHC--------RDRAGSGREPRPVRVGLVSTKWREYAVTWYLRGILEHLPRSD-LTVELI----------------------NVGGGAVWAPLAAAVDDVVEVPR-QLDQARTAIAARELDVLVYPEIGMTALTYFLAFARLAPVQCVTWGHPVTTGVPTMDYFLSSDAAEPDDGQCYYSERLVRLPGLTTCYARPDMPP----------PHSRADLGLD----------------------------ERATL------------------------------------------------------YCYPHALFKLHPDFDAVLHGILDEDRTARIVMFSDPGGAIADGLKARWGSSAAVDGDRITFLAMRPFEDFL--AILQASDVILDAFPFAGGNTTYQALGIGTPLVSLRGKTLAGRTATMLFERAGLEELLADSPEAYVAIAIRLGRDAAYR 693          
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Match: A0A831X3P0_9BACT (Tetratricopeptide repeat protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A831X3P0_9BACT)

HSP 1 Score: 190 bits (483), Expect = 1.000e-46
Identity = 166/541 (30.68%), Postives = 233/541 (43.07%), Query Frame = 1
Query:  853 LADPVREVGKTPFHLAHQGGPDLEMMASLAGVYDVAAPSLRYVAPHCAGGTNEKGREAAKRRVAGRPIRLGFFS-VYLRDHSIGKMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGGDPVEEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSFARLAPVQCVWWGHPVTPSTGAIDYFLSLDV-ELEEGQDDYLEQMVRMDFLNTAYFKQGRAPLTLWPHEPMCPHEPI*LNCNFWRKSWPLIVLLSLPRCLLSFRQVNGGTENAELPPESPSTPMTKPACPSNDTDVYGISLPRAGAAEASTRPNSVSGEAWPNPACSRNYLVLARLFKMHPDFDAAIEGILAGDVGGCVVLIHETRD-------EEWTRV---VWTRLRDVLTPRGDHDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEALSNGVPVVTLPAKFVRGRFALAIYRQMEYTELVADDVAEYVSIAVRLGVDQAFRKEAVIKLQEAYRVALHKHEQSAHEWAAFFV 2439
            L DP +E+ K  F+LA+QG  DL ++  +A +Y  A PSL Y APHC  G   +G +          IR+GF S  + R+H I K+   +I  L+ +    V +F              Q  +E    R   P ++ L   VH    +P     +AR  +AQ++LD+L Y D+GMEP TYF++F+RLAPVQCVW GHPVT     +DYF+S +  E++  Q+ Y EQ+V +      +++   A       +P+ P     L+ N                                                                                    S  YL     FK HP+FD  +  IL  D  G +VL+ + R        E + R    V  R+R V  PR   D  R +        L  +  +LDT  +GG  T  EAL  GVPVVTLP +F+RGR   A+Y+ M  TE VA D  +YV IAVRL  D AFR E V +   A    L++  ++  E   FF+
Sbjct:  452 LQDPAQEIDKPHFYLAYQGFNDLPLLKQMARMYAKACPSLLYTAPHCLSGAAREGDQK---------IRIGFISRFFTREHIIWKVTKGIIANLSRQH-FSVTIFFF-----------DQLFDE--MYRLAQPPDDCL---VH----LPMVS-SVARERIAQQKLDLLFYTDIGMEPFTYFLAFSRLAPVQCVWTGHPVTTGIENLDYFISAENDEVDNAQEHYSEQLVLLKSRPAYHYRPSLA-------QPLKPRSYFGLDQN------------------------------------------------------------------------------------SHIYLCPMTPFKFHPEFDEVMASILRADRAGQIVLVEDERKRLFELLLERFGRTMPDVADRIRFV--PRQSADNFRNL--------LAVSDVILDTLHFGGGTTSCEALGIGVPVVTLPGQFLRGRGTYALYKLMGLTECVAHDKEDYVKIAVRLAADPAFR-ERVREEILARNSVLYEDSEAVREMEQFFI 859          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig105.697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUN2_9PHAE5.130e-29655.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK50_ECTSI3.360e-26657.99Putative methyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A7S3K439_9STRA2.610e-7833.44Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2T266_9STRA1.570e-6331.44Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A090AA90_9GAMM3.400e-5229.55TPR repeat-containing protein n=1 Tax=Thioploca in... [more]
A0A2E4XRJ1_9PROT2.400e-5029.70Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A1F7LKE1_9BACT6.880e-5030.30Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
A0A2E4XWA5_9PROT2.450e-4929.57Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A2E6QJU9_9PROT9.020e-4730.60Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A831X3P0_9BACT1.000e-4630.68Tetratricopeptide repeat protein n=1 Tax=Blastocat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig105contigS-firma_F_contig105:20083..26317 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FK50
PFAMsGlyco_transf_41
Max annot lvl2759|Eukaryota
Evalue1.59e-157
EggNOG OGs2D0DI@1|root,2SDSU@2759|Eukaryota
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionO-GlcNAc transferase, C-terminal
Ec32 orthologEc-04_005820.1
Exons13
Model size2442
Cds size1428
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815584.9833672-UTR-S-firma_F_contig105:20082..202231622815584.9833672-UTR-S-firma_F_contig105:20082..20223Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 20083..20223 -
1696949434.576937-UTR-S-firma_F_contig105:20082..202231696949434.576937-UTR-S-firma_F_contig105:20082..20223Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 20083..20223 -
1622815584.997927-UTR-S-firma_F_contig105:20426..205431622815584.997927-UTR-S-firma_F_contig105:20426..20543Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 20427..20543 -
1696949434.596537-UTR-S-firma_F_contig105:20426..205431696949434.596537-UTR-S-firma_F_contig105:20426..20543Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 20427..20543 -
1622815585.0127122-UTR-S-firma_F_contig105:20987..211001622815585.0127122-UTR-S-firma_F_contig105:20987..21100Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 20988..21100 -
1696949434.6080022-UTR-S-firma_F_contig105:20987..211001696949434.6080022-UTR-S-firma_F_contig105:20987..21100Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 20988..21100 -
1622815585.025661-UTR-S-firma_F_contig105:21515..219571622815585.025661-UTR-S-firma_F_contig105:21515..21957Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 21516..21957 -
1696949434.6169932-UTR-S-firma_F_contig105:21515..219571696949434.6169932-UTR-S-firma_F_contig105:21515..21957Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 21516..21957 -
1622815585.1757746-UTR-S-firma_F_contig105:26116..263171622815585.1757746-UTR-S-firma_F_contig105:26116..26317Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 26117..26317 -
1696949434.770056-UTR-S-firma_F_contig105:26116..263171696949434.770056-UTR-S-firma_F_contig105:26116..26317Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig105 26117..26317 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815585.0379336-CDS-S-firma_F_contig105:21957..219591622815585.0379336-CDS-S-firma_F_contig105:21957..21959Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 21958..21959 -
1696949434.6267164-CDS-S-firma_F_contig105:21957..219591696949434.6267164-CDS-S-firma_F_contig105:21957..21959Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 21958..21959 -
1622815585.0504556-CDS-S-firma_F_contig105:21979..220371622815585.0504556-CDS-S-firma_F_contig105:21979..22037Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 21980..22037 -
1696949434.6415489-CDS-S-firma_F_contig105:21979..220371696949434.6415489-CDS-S-firma_F_contig105:21979..22037Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 21980..22037 -
1622815585.0632236-CDS-S-firma_F_contig105:22067..222141622815585.0632236-CDS-S-firma_F_contig105:22067..22214Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 22068..22214 -
1696949434.6545177-CDS-S-firma_F_contig105:22067..222141696949434.6545177-CDS-S-firma_F_contig105:22067..22214Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 22068..22214 -
1622815585.0765228-CDS-S-firma_F_contig105:22661..227931622815585.0765228-CDS-S-firma_F_contig105:22661..22793Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 22662..22793 -
1696949434.6643715-CDS-S-firma_F_contig105:22661..227931696949434.6643715-CDS-S-firma_F_contig105:22661..22793Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 22662..22793 -
1622815585.0902302-CDS-S-firma_F_contig105:23197..234241622815585.0902302-CDS-S-firma_F_contig105:23197..23424Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 23198..23424 -
1696949434.6749387-CDS-S-firma_F_contig105:23197..234241696949434.6749387-CDS-S-firma_F_contig105:23197..23424Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 23198..23424 -
1622815585.1079583-CDS-S-firma_F_contig105:23816..241751622815585.1079583-CDS-S-firma_F_contig105:23816..24175Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 23817..24175 -
1696949434.68936-CDS-S-firma_F_contig105:23816..241751696949434.68936-CDS-S-firma_F_contig105:23816..24175Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 23817..24175 -
1622815585.1239378-CDS-S-firma_F_contig105:24446..246101622815585.1239378-CDS-S-firma_F_contig105:24446..24610Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 24447..24610 -
1696949434.7023616-CDS-S-firma_F_contig105:24446..246101696949434.7023616-CDS-S-firma_F_contig105:24446..24610Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 24447..24610 -
1622815585.1379569-CDS-S-firma_F_contig105:24948..250781622815585.1379569-CDS-S-firma_F_contig105:24948..25078Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 24949..25078 -
1696949434.7204087-CDS-S-firma_F_contig105:24948..250781696949434.7204087-CDS-S-firma_F_contig105:24948..25078Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 24949..25078 -
1622815585.151076-CDS-S-firma_F_contig105:25409..255691622815585.151076-CDS-S-firma_F_contig105:25409..25569Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 25410..25569 -
1696949434.7421153-CDS-S-firma_F_contig105:25409..255691696949434.7421153-CDS-S-firma_F_contig105:25409..25569Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 25410..25569 -
1622815585.162394-CDS-S-firma_F_contig105:26067..261161622815585.162394-CDS-S-firma_F_contig105:26067..26116Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 26068..26116 -
1696949434.7568412-CDS-S-firma_F_contig105:26067..261161696949434.7568412-CDS-S-firma_F_contig105:26067..26116Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig105 26068..26116 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig105.697.1prot_S-firma_F_contig105.697.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig105 21958..26116 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig105.697.1

>prot_S-firma_F_contig105.697.1 ID=prot_S-firma_F_contig105.697.1|Name=mRNA_S-firma_F_contig105.697.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=476bp
MSAIDQMEQEVIAATRERSGDWLEAADATCAAIVSQRRQEVREVYHHGRM
DGQCLHRSQLTELLPSGMRLCNPSAPSMAAPRAEDERGWLVDSASSLAAC
RAFFEISDMEFARAACLRALRLGEMNMSEVTEIDARLAAIAERYGRPSVA
VQLYFRMMASPATNDDRRLALSILGLTMVPPTLIGGSLRVIAEFRTAWAR
DLRKLRRNLVTGATEGELADPVREVGKTPFHLAHQGGPDLEMMASLAGVY
DVAAPSLRYVAPHCAGGTNEKGREAAKRRVAGRPIRLGFFSVYLRDHSIG
KMMAQLIVLLAEKPGLEVHVFARGLSGGRGGGSGSQAGEEGTEKRGGDPV
EEALRSRVHHWHQVPRWDLHLARTAVAQEELDVLVYPDVGMEPLTYFMSF
ARLAPVQCVWWGHPVTPSTGAIDYFLSLDVELEEGQDDYLEQMVRMDFLN
TAYFKQGRAPLTLWPHEPMCPHEPI*
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mRNA from alignment at S-firma_F_contig105:20083..26317-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig105.697.1 ID=mRNA_S-firma_F_contig105.697.1|Name=mRNA_S-firma_F_contig105.697.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6235bp|location=Sequence derived from alignment at S-firma_F_contig105:20083..26317- (Sphaerotrichia firma ET2_F female)
GTCAGAGTCGATGGGTTTTTGGTTGGCGTCGCCGGAGTGGGAAGCCATAT TGTTGAAGTCACTCGCACGAACACGGTCAACTCGTCGTTGTCAAGCGAGG CAAGCCCAGAAGGGGGTCGGGGCGGCTGGGGGGTGGAAAACGATCCAGCG AACGATCCAGCGCTTATCGTCGTGGTAAGGGAGGCTTTAAACGATGCGGC CATGTCTGCCATAGACCAAATGGAGCAGGAGGTCATCGCCGCCACAAGAG GTGACCATGTTCCGCAGCATGAATCGCGGCGCTAAAGTGTCTCAGATTCG TGTCCTGGTGTGTAGGATAACTAGACTGGGAATGAAACACCGGGAGGGCT GCTTGGTCTATCCAGGGATATTTTTTCAGTCAGGTATTGAGTCTGAGTCT GCAATGATGCGGCATGTGCAACGACGTTGGTTCTATCCAGATTAATGCGT GGTACGTTTGAGGCGTGCCAGGTTGGAATACTCCAGATGTTCTCTAGATA TTGACTACATGTACATTCCGGTTGTTTTGTACCCACAAGAAGAGGCACCA TGCAATTGCATGATCCGACTAAGTATTCCGGTAAGTAGGCAAGCATGTTC CAAATTGTCACACGTACAGCCATTCGTCATGCCTTGCTTGACTCTACCCA TGGTTCCTAAACCTATCCAGCTGTGTTGTTTGACGTTGCTGCATTTGCTG CGAATGTGACACATTTTCCTCTTCTCCTTTTAATCGACCATATAAAAGAG AGGAGCGGCGACTGGCTAGAGGCTGCAGATGCAACGTGCGCAGCTATAGT CTCGCAACGACGACAAGAAGTTCGAGAGGTGTATCACCACGGCAGAATGG ACGGCCAGTGCTTGCATCGTTCGCAGTTGACGGAGCTCTTACCTTCTGGG ATGCGTTTGTGCGTAGTTTGAATCCTAGCCGAACTACGCAGACACTGTAA ATCTACAACCAAAATGTGTTTTTTGGCTTGAGCGGGAGTTATTCCTTCGA AAGTACAGGAGATATGTGTGGGCATCAACGAAAGAGCCGGCCGTAGTCTT TTTAAGTGTGCCGCAGAAAAGGTCAAAGGTTATGTTCTCGCAGTCGCCGA ACATCCCAAACTTCTTGCTAGAGAATCGACCGTTTGCGAACAACATCGCG CTCCAGACGAACGACCTCTGCAGACTGGAATTTTCACCTGTTTCCCACCT GCAATAATGGCGTTTTGCGCGACATCCGGCTGCTTGCAGATGCAACCCTT CCGCTCCCTCTATGGCCGCGCCCCGAGCCGAAGATGAAAGAGGGTGGCTG GTGGATTCGGCCTCTAGCTTGGCTGCCTGCAGGGCCTTCTTCGAAATATC CGACATGGAGTTTGCCAGGGTACGGTGCGGCACATGGCAGCAGTGAACTA AGCGGTGAAAGCGGGGCCATTTCGAAAAGCAGAACGAATGGTAGTTCGCC CAGGGAGAGTTAGGCAAATCTTCGAGTTGTGCAGCTGATCGAAGGCTCAC GTTCAGATTTTTCGCAGGTAGCATGCTCAGTGCATCAAATTCTCGACGCT ACCGAGCATTTGTAGTGCGACCATCGATGGGTATTCTTTCGACCTCGTGC AGATTCAGCCTCCCCATTATTCGACCCAAGAATTTACTGTTCCAGATGCT AACTACTTCCGTTGTTGGCCCACATGCGCCGTGAATTATGTGCTCTTTGT CACGTAGGCAGCATGCTTGCGCGCATTGCGTCTAGGCGAAATGAACATGA GCGAGGTCACAGAGATTGACGCGCGCCTGGCTGCGATAGCAGAACGGTAC GGCCGGCCGTCAGTGGCCGTCCAACTGTACTTTCGCATGATGGCGAGTCC TGCAACGAACGACGATCGGCGGTGAGAAACAGCAGTCGGAACATCGTAAA CCTACATTTTCAACGCGATCAACGACCGAATTCTAAGTGCCATCAAAGGC GTCTGTTTTCTTCTGGAAAGAAGGCCCCCGACCCCGAAGCACTGGACGCA TCTTTTGGGGGGAGGGCTGGCGTACTGGAGGCTGTGGTATTTTTGCAAAC GGCGTCGGTGGCAAGACCCGAGTGTACCCTACGCAAAACGCACATCGGTT GAAGCTGCTTGAATTGTGTTGCATTTTCCGTCGCTGCTCAAGGCTGGCCT TGTCGATACTGGGGTTGACGATGGTTCCGCCGACGCTCATCGGCGGTTCC CTGAGAGTAATCGCTGAGTTCCGGACAGCCTGGGCAAGAGACTTGCGAAA GCTTCGGAGGAATCTTGTCACAGGAGCAACGGAGGGTGAGCTCGCGGACC CGGTCCGGGAGGTGGGGAAGACACCGTTTCATCTGGCGCATCAGGGTGGC CCCGACCTCGAGATGATGGCATCCCTCGCTGGGGTGTACGACGTCGCAGC GCCGTCTCTTCGCTATGTCGCACCACATTGTGCAGGCGGCACGAATGAGA AAGGTCGAGAAGCAGCGAAACGACGCGTCGCGGGAAGACCGATTCGACTA GGTCAGGTTAGGACAGAGGGGGGTCATTTTCTCTGTATTGTTACGATAAT CGGCAAACCTAGTTACCGTTGTTTGGGCCTTGACATCACAACTCCGTACT GCTTCCACGTACTACAGCGCAGCGGTCAAGAACGACAGTAAGCATATGTG CTAAACGTCGGCGACGCACTTTCTCTCAAGACGTTGGCCAAGCAACCACA AAAGCTCAACACCGCGTTTTCGCCGAATCTCCTCACTCCACCACGAAGCA CGCCCTTCTTGTAGTGCCCAACATCTGCAAAGGTACCAGGAGGTGTGACA AACCAGACGGCAGTCTCTATCTATTATAGTGCGAATGGAAAAAACAATTA TAGTGCTCAATTTTTGCCTTTCCGAAATGATGACACGAAACAGGATTTTT CTCGGTATACCTGAGAGACCACTCTATCGGCAAGATGATGGCCCAGCTCA TCGTACTCCTGGCGGAGAAACCAGGCCTCGAGGTGCATGTGTTCGCTCGT GGTCTTAGTGGTGGTCGTGGTGGTGGCAGTGGTAGCCAAGCGGGGGAGGA GGGGACGGAGAAGCGGGGAGGCGACCCGGTCGAGGAAGCTCTACGATCGC GGGTCCATCACTGGCATCAGGTTTGACAAGCGAGGTCCCGCCACCAGTGA ACCAGAATAGTGCCACCAGAAGATTTGCTAGTGCACCAACCCCAAAGTTT CAAAGATTGTTTCGCACCGATGCAAACTTGCGGATGTACGTATGGAAAAG CGACCTGGGACGAGAGGCACACAGGGCCTCTTTTCAGTGTTCAATGGGTC TTCCGTACACGACATGCTCCATCTTCTACCTCATAATTGTAGGCAAGCGT CAGAAACAGAGCTGCCAACAACAACATCCGCCGTTCGTGTTATCCCCGAA ACGCGAGAGAGCGCCAAGGATTTTGACTCGGCGCTCGTTCGTGCGACCAG CTCTCCTCATGAACGTTGTTTTCAGTTTTAGTAATGCATCATTACGCAAC GACTTGACCCCAACCTCGAACAAGGTGCCCCGTTGGGACCTACACTTGGC GAGGACGGCGGTGGCGCAGGAGGAGCTGGACGTGCTCGTTTATCCAGACG TCGGGATGGAACCTCTCACGTATTTCATGTCGTTCGCCAGGCTGGCTCCG GTGCAGGTAGGTAGGTAGATGTCTTACAGGTTCTTTCCGGGCTTTTGAGC GGTACCGATGTGCAAGCGGAGAGTTCCTACCTCGCATATCTGCTGGGGAG GCCACGGTAGTAGAAGCGCGTTGCCCCGTGTGGCTGCCTCATCAGGGCCC CTGCAGTATCATAGAAGCACGATACATCGGTCGAGCGTCTGCAACCGCGT ACTGTTTATTTACGTGGTGTCTAGAAAATGTGCTATTGAATGGATAGGGT GTAACAGCATCTCCCCACTTCAACAATCATCGTGCAAGTCGCATAACGAC GAAGATCATGGTTGTACATGTACCGGCGAAAACAATACCGTGCGCGAGGT GGGTCTATTTTACTGTGCCAGGCTGTTGAAACATTGGAATTCGTCGCCCA CGCATGTACAACACCACAACACCAACGGATTTAAACGATTCCTACCCACG CAGTGTGTTTGGTGGGGGCACCCGGTAACACCGAGCACCGGAGCTATCGA CTATTTCTTGTCCTTGGACGTGGAATTAGAAGAAGGTCAAGACGACTACC TGGAACAGATGGTCCGCATGGACTTCCTCAACACGGCGTATTTCAAGCAG GTATTCTAACGCGCATCCCCCTCATTCTAGGGTCGTGCTCCTTTGACTTT GTGGCCACACGAGCCTATGTGTCCACACGAGCCTATATGTCCTGAACTCT TGTCCCAGAACTTAACTGCAATTTCTGGAGAAAATCGTGGCCACTTATCG TCCTTCTCTCTCTGCCCCGCTGTCTATTGTCATTTCGTCAGGTGAATGGT GGGACAGAAAACGCTGAGCTGCCACCGGAGTCACCATCTACTCCCATGAC CAAGCCTGCTTGCCCTTCCAACGATACAGATGTGTATGGAATCTCTCTTC CTCGTGCCGGTGCTGCCGAGGCGAGCACTAGGCCTAACTCCGTCAGCGGT GAGGCGTGGCCCAACCCAGCGTGCTCACGCAACTACCTTGTTCTGGCACG CCTGTTCAAAATGCACCCGGATTTTGATGCCGCCATCGAGGGAATTCTGG CCGGAGACGTGGGTGGGTGCGTGGTGTTGATCCACGAGACACGGGACGAA GAGTGGACTCGAGTGGTGTGGACCAGGCTCCGGGACGTGCTTACCCCACG AGGTATCTATGTTTTGGATTCATGGATTTTATGGTTAACCGTAGTAAGCC GGTGAGGGTGCGCCTATTTTCCTGACTTGCTGGCCAACTCGGTGCACATT ATTCCTTGAGTCGTGATAAAGCGAAAACAACGCAAAATGGTTCTTGAGCG TGCCATTGAAGACACTCAAAGGCCAGCACGCGATGTGTCGCTCGTTCTTG ACGGGGTCGCTCGTCTATCAAGTCATCAAGCGCACACCGCCAGAGATTAA CACAGGCGTACGTATGTCGTGGCTTCCTTAGATGCACTCGCAGCCGAGAT GCTGGGATAGAAATTGCGGATAAGCAACTGCCATCTGCCATCCCTCCCCC TCCGCTTCCGTACACCCACTCTATTTGTGCTCACTCTTCTCCGCCCGATG CCGACCTACCTCTGCAGGTGATCATGATCGTCTGCGAATTATGCATCACT GGCTCTACCCGCAGGCTCTTCGCCGTGCCACCGCCGTCCTCGATACCTTT CCGTACGGGGGTTGCCTGACAGTTCTAGAGGTGAACAAAGTGCTGGTTGT CACATAAGACTTTTGAGATTTCGCAACCGGTCGTTCTTTGTGTTGGGTTA AGGGGGCAATGCTATAGGGGTCCTACTGCTCCCGCAACAACCTGGCGTAC AAAATAGTGGAAGGTATTTAGACAAAGGAAGAGCCAACCACTTTCCCGGT AGTTGTCACGTCTCTTGTCCTCAATGTTTTGGAGAGGTTTCAGCGGCTTC AACTCATCGATTCGAGACAAATTCCCGCCATTTGAAGTGGGGTGGCTGCT AGTGGCTGCGTCGAGGAACAAGCTAACTGACTCTGTACGTGCCGCTGGAG AATGAAAACAGAATCCAAACAAATGTACGCTTTGACAACCCCAATTATTC TTATTAATTGTTTTCTGCATCGGATGTCGGTCGTGGTGTTGTCTTTGCTG CCGCGCTACCGCCCACGGACCCAGGCGCTTTCGAATGGCGTGCCAGTGGT GACTCTCCCAGCCAAGTTTGTTAGGGGGAGATTCGCCCTAGCCATATACA GACAGATGGAATATACCGAGCTCGTGGCCGATGACGTCGCGGTAAGCACC GTGGGGATAACGATGTAGCCGTGAATGCTGTGCTGAACCCGCGCTGAAGA GCAACCAAAGACGGCTTAAAGCCGATCGATGTGCACTATCCGTTTCCCAT CTCTTCTCTCCACGATCGCCGTCGATCATCTGTCGTCCGAACGCGAATGC GTATTTATCGTGCGCCTCAACTCCCAACTCCTGCTACGCCCCAGGAATAC GTCTCGATAGCGGTTAGGCTTGGGGTAGACCAAGCGTTCAGGAAGGAGGC GGTGATCAAGTTGCAAGAGGCTTATCGAGTGGCCTTGCACAAGCACGAAC AGAGCGCCCACGAATGGGCGGCATTTTTCGTTCGC
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Coding sequence (CDS) from alignment at S-firma_F_contig105:20083..26317-

>mRNA_S-firma_F_contig105.697.1 ID=mRNA_S-firma_F_contig105.697.1|Name=mRNA_S-firma_F_contig105.697.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2856bp|location=Sequence derived from alignment at S-firma_F_contig105:20083..26317- (Sphaerotrichia firma ET2_F female)
ATGTCTGCCATAGACCAAATGGAGCAGGAGGTCATCGCCGCCACAAGAGA
TGTCTGCCATAGACCAAATGGAGCAGGAGGTCATCGCCGCCACAAGAGAG
AGGAGCGGCGACTGGCTAGAGGCTGCAGATGCAACGTGCGCAGCTATAGT
CTCGCAACGACGACAAGAAGTTCGAGAGGTGTATCACCACGGCAGAATGG
ACGGCCAGTGCTTGCATCGTTCGCAGTTGACGGAGCTCTTACCTTCTGGG
ATGCGTTTAGAGGAGCGGCGACTGGCTAGAGGCTGCAGATGCAACGTGCG
CAGCTATAGTCTCGCAACGACGACAAGAAGTTCGAGAGGTGTATCACCAC
GGCAGAATGGACGGCCAGTGCTTGCATCGTTCGCAGTTGACGGAGCTCTT
ACCTTCTGGGATGCGTTTATGCAACCCTTCCGCTCCCTCTATGGCCGCGC
CCCGAGCCGAAGATGAAAGAGGGTGGCTGGTGGATTCGGCCTCTAGCTTG
GCTGCCTGCAGGGCCTTCTTCGAAATATCCGACATGGAGTTTGCCAGGAT
GCAACCCTTCCGCTCCCTCTATGGCCGCGCCCCGAGCCGAAGATGAAAGA
GGGTGGCTGGTGGATTCGGCCTCTAGCTTGGCTGCCTGCAGGGCCTTCTT
CGAAATATCCGACATGGAGTTTGCCAGGGCAGCATGCTTGCGCGCATTGC
GTCTAGGCGAAATGAACATGAGCGAGGTCACAGAGATTGACGCGCGCCTG
GCTGCGATAGCAGAACGGTACGGCCGGCCGTCAGTGGCCGTCCAACTGTA
CTTTCGCATGATGGCGAGTCCTGCAACGAACGACGATCGGCGGCAGCATG
CTTGCGCGCATTGCGTCTAGGCGAAATGAACATGAGCGAGGTCACAGAGA
TTGACGCGCGCCTGGCTGCGATAGCAGAACGGTACGGCCGGCCGTCAGTG
GCCGTCCAACTGTACTTTCGCATGATGGCGAGTCCTGCAACGAACGACGA
TCGGCGGCTGGCCTTGTCGATACTGGGGTTGACGATGGTTCCGCCGACGC
TCATCGGCGGTTCCCTGAGAGTAATCGCTGAGTTCCGGACAGCCTGGGCA
AGAGACTTGCGAAAGCTTCGGAGGAATCTTGTCACAGGAGCAACGGAGGG
TGAGCTCGCGGACCCGGTCCGGGAGGTGGGGAAGACACCGTTTCATCTGG
CGCATCAGGGTGGCCCCGACCTCGAGATGATGGCATCCCTCGCTGGGGTG
TACGACGTCGCAGCGCCGTCTCTTCGCTATGTCGCACCACATTGTGCAGG
CGGCACGAATGAGAAAGGTCGAGAAGCAGCGAAACGACGCGTCGCGGGAA
GACCGATTCGACTAGGCTGGCCTTGTCGATACTGGGGTTGACGATGGTTC
CGCCGACGCTCATCGGCGGTTCCCTGAGAGTAATCGCTGAGTTCCGGACA
GCCTGGGCAAGAGACTTGCGAAAGCTTCGGAGGAATCTTGTCACAGGAGC
AACGGAGGGTGAGCTCGCGGACCCGGTCCGGGAGGTGGGGAAGACACCGT
TTCATCTGGCGCATCAGGGTGGCCCCGACCTCGAGATGATGGCATCCCTC
GCTGGGGTGTACGACGTCGCAGCGCCGTCTCTTCGCTATGTCGCACCACA
TTGTGCAGGCGGCACGAATGAGAAAGGTCGAGAAGCAGCGAAACGACGCG
TCGCGGGAAGACCGATTCGACTAGGATTTTTCTCGGTATACCTGAGAGAC
CACTCTATCGGCAAGATGATGGCCCAGCTCATCGTACTCCTGGCGGAGAA
ACCAGGCCTCGAGGTGCATGTGTTCGCTCGTGGTCTTAGTGGTGGTCGTG
GTGGTGGCAGTGGTAGCCAAGCGGGGGAGGAGGGGACGGAGAAGCGGGGA
GGCGACCCGGTCGAGGAAGCTCTACGATCGCGGGTCCATCACTGGCATCA
GGATTTTTCTCGGTATACCTGAGAGACCACTCTATCGGCAAGATGATGGC
CCAGCTCATCGTACTCCTGGCGGAGAAACCAGGCCTCGAGGTGCATGTGT
TCGCTCGTGGTCTTAGTGGTGGTCGTGGTGGTGGCAGTGGTAGCCAAGCG
GGGGAGGAGGGGACGGAGAAGCGGGGAGGCGACCCGGTCGAGGAAGCTCT
ACGATCGCGGGTCCATCACTGGCATCAGGTGCCCCGTTGGGACCTACACT
TGGCGAGGACGGCGGTGGCGCAGGAGGAGCTGGACGTGCTCGTTTATCCA
GACGTCGGGATGGAACCTCTCACGTATTTCATGTCGTTCGCCAGGCTGGC
TCCGGTGCAGGTGCCCCGTTGGGACCTACACTTGGCGAGGACGGCGGTGG
CGCAGGAGGAGCTGGACGTGCTCGTTTATCCAGACGTCGGGATGGAACCT
CTCACGTATTTCATGTCGTTCGCCAGGCTGGCTCCGGTGCAGTGTGTTTG
GTGGGGGCACCCGGTAACACCGAGCACCGGAGCTATCGACTATTTCTTGT
CCTTGGACGTGGAATTAGAAGAAGGTCAAGACGACTACCTGGAACAGATG
GTCCGCATGGACTTCCTCAACACGGCGTATTTCAAGCAGTGTGTTTGGTG
GGGGCACCCGGTAACACCGAGCACCGGAGCTATCGACTATTTCTTGTCCT
TGGACGTGGAATTAGAAGAAGGTCAAGACGACTACCTGGAACAGATGGTC
CGCATGGACTTCCTCAACACGGCGTATTTCAAGCAGGGTCGTGCTCCTTT
GACTTTGTGGCCACACGAGCCTATGTGTCCACACGAGCCTATATGGTCGT
GCTCCTTTGACTTTGTGGCCACACGAGCCTATGTGTCCACACGAGCCTAT
ATAAAA
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