mRNA_S-firma_F_contig10485.683.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10485.683.1
Unique NamemRNA_S-firma_F_contig10485.683.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: D7FRY7_ECTSI (Aldo/Keto Reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRY7_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 2.730e-103
Identity = 149/180 (82.78%), Postives = 164/180 (91.11%), Query Frame = 1
Query:    1 QCALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAY 540
            +CALKAGY HIDCAWCY NQ EVG ALA AFK+++IIREN+FITTKLWNTFHRP LL+KN++TCLKDL LP+VD VQLHYSFAM+P ADET+LVPRH NGDAHLDD+V LKQTWKAMEGFVE GLAK+IGVSNFTKEELA+VMEDAKIMPSVLQVE+HPYL N ELL WCKEK IHVTAY
Sbjct:   37 KCALKAGYLHIDCAWCYGNQVEVGKALADAFKEDNIIRENVFITTKLWNTFHRPELLKKNLDTCLKDLGLPYVDCVQLHYSFAMVPCADETVLVPRHANGDAHLDDEVDLKQTWKAMEGFVESGLAKTIGVSNFTKEELAYVMEDAKIMPSVLQVEIHPYLPNTELLLWCKEKNIHVTAY 216          
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: A0A8J9V3I8_9NEOP ((lesser marbled fritillary) hypothetical protein n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9V3I8_9NEOP)

HSP 1 Score: 176 bits (447), Expect = 3.750e-48
Identity = 97/232 (41.81%), Postives = 137/232 (59.05%), Query Frame = 1
Query:    7 ALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAYGKCSPPTSKGRAERQWSCVFSCVMCFEGTFGCI----------FLMRYLIDQGL 672
            A+  GYRHIDCA  Y N+ EVG AL A F++  I RE++FIT+KLW TFHRP L+  +++T L+DL L ++D+  +H+  A     +E +L P  E G A     V    TWKAME  V+ GL KSIG+SNF K ++  VME+++I P+ LQ+E+HPYLN  +L+++CK  GI V+AY     P      +R W+      +  +     I           L+RY ID+GL
Sbjct:   37 AIDLGYRHIDCALIYGNEKEVGAALKAKFEEGVIKREDIFITSKLWCTFHRPDLVEGSVKTTLQDLGLEYLDLYLIHWPQAY---KEEDVLFPVDEQGKA-APSPVDYVDTWKAMENLVDKGLVKSIGLSNFNKRQIDRVMENSRIKPASLQIEVHPYLNQEKLINYCKSLGITVSAYSPLGSP------DRPWAKPGEPQLLEDPRLKAIADRYSKSTAQILIRYAIDRGL 258          
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: A0A834IUR0_RHYFE (Aldo_ket_red domain-containing protein n=2 Tax=Dryophthorinae TaxID=39812 RepID=A0A834IUR0_RHYFE)

HSP 1 Score: 174 bits (442), Expect = 2.190e-47
Identity = 85/195 (43.59%), Postives = 124/195 (63.59%), Query Frame = 1
Query:    7 ALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAYGKCSPPTSKGRAERQWS 591
            AL  GYRHIDCA  Y N+AEVG AL+A   D ++ RE +++T+KLWNT HRP L+   + T LK+L L ++D+  +H+ FA+    ++  L P  E+G A   D V    TWKAME  V+ GL KSIG+SNF K+++  ++ +  I P+ +Q+E+HPYLN  +L+D+C+ K I +TAY     P      +R W+
Sbjct:   38 ALDIGYRHIDCAHIYGNEAEVGAALSAKLGDGTVKREEIYVTSKLWNTMHRPDLVEPAIRTTLKNLNLQYLDLYLIHWPFAL---KEDGELFPVTEDGKAAFSD-VDYLDTWKAMEALVKKGLTKSIGISNFNKKQVERLLANCSIPPATIQIEVHPYLNQQKLIDFCQSKNIVITAYSPLGSP------DRPWA 222          
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: UPI0013F22C13 (aldo-keto reductase family 1 member B1-like n=1 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F22C13)

HSP 1 Score: 173 bits (439), Expect = 6.020e-47
Identity = 87/197 (44.16%), Postives = 122/197 (61.93%), Query Frame = 1
Query:    1 QCALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAYGKCSPPTSKGRAERQWS 591
            Q A+  GYRHIDCA+ Y N+ E+G A+ A  K+N + RE LFIT+KLWNTFHRP L+   ++  L DL L +VD+  +H+    +   +   L P++ +G   L D V    TWKAME  +  GLAK+IG+SNF  E++  ++E+A + P   Q+E HPYL+  EL ++CKEKGI VTAY     P      +R W+
Sbjct:   37 QDAIDIGYRHIDCAYIYGNEKEIGAAIQAKIKENVVKREELFITSKLWNTFHRPDLVEPTIKRTLADLGLDYVDLYLIHWP---VGFKEGDNLFPKNADGTTTLSD-VDYVDTWKAMEAVLSKGLAKNIGISNFNSEQITRLLENATVKPVTNQIECHPYLSQKELSNFCKEKGILVTAYSPLGSP------DRPWA 223          
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: A0A8H7U724_MORIS (Aldo_ket_red domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U724_MORIS)

HSP 1 Score: 172 bits (437), Expect = 1.530e-46
Identity = 86/178 (48.31%), Postives = 117/178 (65.73%), Query Frame = 1
Query:    7 ALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAY 540
            A+  GYRH+DCA  Y N+ EVG AL    K+    RE +FIT+KLWN  HRP  + K ++  LKDL + ++D+  +H+  A  P  D   L P  E+G   LDD VT+++TW AME  ++ G  K+IGVSNFT  +L  +++ AK++P+V QVE+HPYL   ELLDWCKE  IH+TAY
Sbjct:   57 AINHGYRHVDCAHVYRNEHEVGDAL----KNIKTPREQVFITSKLWNNSHRPEKVEKALDVTLKDLGVSYLDLYLIHWPVAFKPTDD---LFPLSEDGKTALDDGVTIEETWAAMEKLLDTGKVKAIGVSNFTIPKLEKLLKTAKVVPAVNQVELHPYLPQNELLDWCKEHNIHLTAY 227          
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: A0A2J7Q6Y9_9NEOP (1,5-anhydro-D-fructose reductase (Fragment) n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q6Y9_9NEOP)

HSP 1 Score: 169 bits (429), Expect = 2.090e-46
Identity = 84/191 (43.98%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    7 ALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAYGKCSPPTSKGRAE 579
            A+  GYRHID A  Y N+ EVG A+ A   +  I RE++F+T+KLWNT+H+P L+++ +   L DL L ++D+  +H+ FA     +  +L+P+ ENG   +   V    TWK ME  V+ GL KSIG+SNF  E++  V++ A I P V QVE HPYLN ++L+ +CKE+GI +TAY     P S  RA+
Sbjct:   36 AIDVGYRHIDGAMVYENEKEVGAAINAKIAEGVIKREDIFVTSKLWNTYHKPELVQQGLRKTLADLGLKYLDLYLMHWPFAF---KEGEVLMPKDENGQL-IPSDVDYVDTWKEMEECVKSGLTKSIGLSNFNSEQIQRVLDIATIKPVVNQVECHPYLNQSKLIAFCKERGIVITAYCPLGSPNSIARAD 222          
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: UPI00118309CB (aldo-keto reductase family 1 member B1 n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI00118309CB)

HSP 1 Score: 171 bits (434), Expect = 3.000e-46
Identity = 96/232 (41.38%), Postives = 137/232 (59.05%), Query Frame = 1
Query:    7 ALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAYGKCSPPTSKGRAERQWSCVFSCVMCFEGTFGCI----------FLMRYLIDQGL 672
            A+  GYRHIDCA  Y N+ EVG AL A F++  + RE++FIT+KLW TFHRP L+   ++T L++L L ++D+  +H+  A     D   L P+ E+ D  +   V    TWKA+EG VE GL +SIG+SNF K+++  V+E AKI P+VLQ+E+HPYLN  +L D+CK + I VTAY     P      +R W+      +  +     I           L+RY ID+G+
Sbjct:   37 AIDIGYRHIDCAHIYLNEKEVGEALKAKFEEGVVKREDIFITSKLWCTFHRPDLVEGAIKTTLENLGLEYLDLYLIHWPQAFKEGDD---LFPKDES-DKVIPSAVDYVDTWKALEGLVEKGLTRSIGLSNFNKKQIDRVLEAAKIKPAVLQIEVHPYLNQQKLFDYCKTRDIAVTAYSPLGSP------DRPWAKPGDPQLLEDPRLKVIADKYNKTPAQVLIRYAIDRGM 258          
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: V5GQ24_ANOGL (Aldose reductase n=2 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5GQ24_ANOGL)

HSP 1 Score: 171 bits (434), Expect = 3.240e-46
Identity = 84/195 (43.08%), Postives = 123/195 (63.08%), Query Frame = 1
Query:    7 ALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAYGKCSPPTSKGRAERQWS 591
            A+  GYRHIDCA  Y N+ E+G AL+  FK+  + RE L+IT+KLWNT HRP L+   ++T LK+L+L ++D+  +H+ FA+    +E  L P + +G     D V    TWKAME   + GL KSIGVSNF K++L  +++++ I P+  Q+E+HPYLN  +L+D+C  K I +TAY     P      +R W+
Sbjct:   38 AISVGYRHIDCAHIYENEPEIGSALSEVFKEGIVKREELYITSKLWNTMHRPDLVEPAIKTTLKNLQLEYLDLYLIHWPFAL---KEEGALFPTNPDGTTAYSD-VDYLDTWKAMEAVQKKGLTKSIGVSNFNKKQLERLLQNSTIPPATNQIEVHPYLNQKKLIDYCTSKKIVITAYSPLGSP------DRPWA 222          
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: A0A7I0ZYR5_DANPL (aldo-keto reductase family 1 member B1-like n=2 Tax=Danaus plexippus plexippus TaxID=278856 RepID=A0A7I0ZYR5_DANPL)

HSP 1 Score: 169 bits (428), Expect = 4.770e-46
Identity = 88/195 (45.13%), Postives = 119/195 (61.03%), Query Frame = 1
Query:    7 ALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAYGKCSPPTSKGRAERQWS 591
            A+ AGYRHIDCA+ Y N+ EVG AL   F +  I RE++FIT+KLW TFHRP L+   +   L+DL L ++D+  +H+         E  L P+ E G   +   V    TWKAME  V+ GL KSIGVSNF K ++  VME A++ P++LQ+E+HPYLN ++LL+ C   GI VTAY     P      +R W+
Sbjct:   36 AIDAGYRHIDCAYIYLNEKEVGEALKQKFDEGVIKREDIFITSKLWCTFHRPDLVEGAIRRTLEDLGLDYLDLYLIHWPVRYFHTEGEE-LFPKDEEGKI-IPSPVDYVDTWKAMEALVDKGLTKSIGVSNFNKRQIDRVMEMARVKPAMLQIEVHPYLNQSKLLEHCSSYGISVTAYSPLGSP------DRPWA 222          
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Match: UPI00067DC58A (aldose reductase-like n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067DC58A)

HSP 1 Score: 171 bits (432), Expect = 5.880e-46
Identity = 88/195 (45.13%), Postives = 121/195 (62.05%), Query Frame = 1
Query:    7 ALKAGYRHIDCAWCYNNQAEVGGALAAAFKDNSIIRENLFITTKLWNTFHRPALLRKNMETCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTLKQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPYLNNAELLDWCKEKGIHVTAYGKCSPPTSKGRAERQWS 591
            A+  GYRHIDCA  Y N+ EVG AL A F + ++ RE++FIT+KLW TFHRP L+   ++  L++L L ++D+  +H+  A     D   L P+ EN D  +   V    TW AME  VE GL KSIGVSNF K +L  V++ AKI P+V Q+E+HPYLN  ++ D+C+ +GI VTAY     P      +R W+
Sbjct:   37 AIDIGYRHIDCAHVYQNEKEVGEALKAKFDEGAVKREDIFITSKLWCTFHRPDLVEGALKVTLENLGLDYLDLYLIHWPQAFQEGDD---LFPKDEN-DKFIPSAVDYVDTWAAMEALVEKGLVKSIGVSNFNKRQLERVLQAAKIKPAVQQIEVHPYLNQQQMFDFCRSQGIAVTAYSPLGSP------DRPWA 221          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10485.683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRY7_ECTSI2.730e-10382.78Aldo/Keto Reductase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A8J9V3I8_9NEOP3.750e-4841.81(lesser marbled fritillary) hypothetical protein n... [more]
A0A834IUR0_RHYFE2.190e-4743.59Aldo_ket_red domain-containing protein n=2 Tax=Dry... [more]
UPI0013F22C136.020e-4744.16aldo-keto reductase family 1 member B1-like n=1 Ta... [more]
A0A8H7U724_MORIS1.530e-4648.31Aldo_ket_red domain-containing protein n=1 Tax=Mor... [more]
A0A2J7Q6Y9_9NEOP2.090e-4643.981,5-anhydro-D-fructose reductase (Fragment) n=2 Ta... [more]
UPI00118309CB3.000e-4641.38aldo-keto reductase family 1 member B1 n=1 Tax=Man... [more]
V5GQ24_ANOGL3.240e-4643.08Aldose reductase n=2 Tax=Anoplophora glabripennis ... [more]
A0A7I0ZYR5_DANPL4.770e-4645.13aldo-keto reductase family 1 member B1-like n=2 Ta... [more]
UPI00067DC58A5.880e-4645.13aldose reductase-like n=1 Tax=Amyelois transitella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10485contigS-firma_F_contig10485:1791..4867 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog1506583.JQJY01000003_gene3431
PFAMsAldo_ket_red
Max annot lvl976|Bacteroidetes
KEGG rclassRC00087,RC00088,RC00099,RC00108
KEGG koko:K00002
KEGG ReactionR00746,R01041,R01481,R05231
KEGG Pathwayko00010,ko00040,ko00561,ko00930,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00040,map00561,map00930,map01100,map01110,map01120,map01130,map01220
KEGG ModuleM00014
Evalue4.6e-24
EggNOG OGsCOG0656@1|root,COG0656@2|Bacteria,4NFTA@976|Bacteroidetes,1HXQP@117743|Flavobacteriia,2NS76@237|Flavobacterium
EC1.1.1.2
Descriptionreductase
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAldo/Keto Reductase
Ec32 orthologEc-03_003640.1
Exons7
Model size1328
Cds size732
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815583.2985017-UTR-S-firma_F_contig10485:1790..18301622815583.2985017-UTR-S-firma_F_contig10485:1790..1830Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10485 1791..1830 +
1696949433.451368-UTR-S-firma_F_contig10485:1790..18301696949433.451368-UTR-S-firma_F_contig10485:1790..1830Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10485 1791..1830 +
1622815583.312326-UTR-S-firma_F_contig10485:2214..23121622815583.312326-UTR-S-firma_F_contig10485:2214..2312Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10485 2215..2312 +
1696949433.4641495-UTR-S-firma_F_contig10485:2214..23121696949433.4641495-UTR-S-firma_F_contig10485:2214..2312Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10485 2215..2312 +
1622815583.3268957-UTR-S-firma_F_contig10485:2469..25111622815583.3268957-UTR-S-firma_F_contig10485:2469..2511Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10485 2470..2511 +
1696949433.4754539-UTR-S-firma_F_contig10485:2469..25111696949433.4754539-UTR-S-firma_F_contig10485:2469..2511Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10485 2470..2511 +
1622815583.4117217-UTR-S-firma_F_contig10485:4451..48671622815583.4117217-UTR-S-firma_F_contig10485:4451..4867Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10485 4452..4867 +
1696949433.5513608-UTR-S-firma_F_contig10485:4451..48671696949433.5513608-UTR-S-firma_F_contig10485:4451..4867Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10485 4452..4867 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815583.3441315-CDS-S-firma_F_contig10485:2511..26031622815583.3441315-CDS-S-firma_F_contig10485:2511..2603Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 2512..2603 +
1696949433.4842944-CDS-S-firma_F_contig10485:2511..26031696949433.4842944-CDS-S-firma_F_contig10485:2511..2603Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 2512..2603 +
1622815583.3568382-CDS-S-firma_F_contig10485:2743..28191622815583.3568382-CDS-S-firma_F_contig10485:2743..2819Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 2744..2819 +
1696949433.499678-CDS-S-firma_F_contig10485:2743..28191696949433.499678-CDS-S-firma_F_contig10485:2743..2819Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 2744..2819 +
1622815583.3674273-CDS-S-firma_F_contig10485:3128..31881622815583.3674273-CDS-S-firma_F_contig10485:3128..3188Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 3129..3188 +
1696949433.5082297-CDS-S-firma_F_contig10485:3128..31881696949433.5082297-CDS-S-firma_F_contig10485:3128..3188Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 3129..3188 +
1622815583.381643-CDS-S-firma_F_contig10485:3578..36381622815583.381643-CDS-S-firma_F_contig10485:3578..3638Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 3579..3638 +
1696949433.5289981-CDS-S-firma_F_contig10485:3578..36381696949433.5289981-CDS-S-firma_F_contig10485:3578..3638Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 3579..3638 +
1622815583.3943682-CDS-S-firma_F_contig10485:4007..44511622815583.3943682-CDS-S-firma_F_contig10485:4007..4451Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 4008..4451 +
1696949433.5398593-CDS-S-firma_F_contig10485:4007..44511696949433.5398593-CDS-S-firma_F_contig10485:4007..4451Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10485 4008..4451 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10485.683.1prot_S-firma_F_contig10485.683.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10485 2512..4451 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10485.683.1

>prot_S-firma_F_contig10485.683.1 ID=prot_S-firma_F_contig10485.683.1|Name=mRNA_S-firma_F_contig10485.683.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=244bp
METCLKDLRLPWVDMVQLHYSFAMIPVADETILVPRHENGDAHLDDQVTL
KQTWKAMEGFVEGGLAKSIGVSNFTKEELAHVMEDAKIMPSVLQVEMHPY
LNNAELLDWCKEKGIHVTAYGKCSPPTSKGRAERQWSCVFSCVMCFEGTF
GCIFLMRYLIDQGLPKMCCPMIRTLSGAPKKLLVTTSVPVYRAGNALESR
THTFCVFRYSRFRMWASRCRARAPGLRSRAVGVTNTVCLVLWI*
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mRNA from alignment at S-firma_F_contig10485:1791..4867+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10485.683.1 ID=mRNA_S-firma_F_contig10485.683.1|Name=mRNA_S-firma_F_contig10485.683.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3077bp|location=Sequence derived from alignment at S-firma_F_contig10485:1791..4867+ (Sphaerotrichia firma ET2_F female)
CAGTGCGCGCTCAAAGCGGGATACAGGCACATCGACTGTGGTAAGGGTTC ATTGTTGACATATTTTAAACGGCGAACAGGGCAAGCATTGCGTATCTTCA TCCGAGCATTGATCCACGACATTGTACAAGTATCAAGTTTTGGCCAAATG TAGCGGATCCGGGCAACGTGCCTGAATTGTCACATTCAACAACCGTTTTT GTTGTAGAAATATTCAGCGATCTCGGCGGGTGTGCGCAGTGAGCATCCCA ACCGTTTCACTTTCGTTCTTCGTGGCATCACTGCTTTCACGTTTTTCTAT TTTTCGCGTTGTTCTCGGGAGCCGGCAATTGTGTGGAAGTGCCTTGGGTG GTTTTTCGTCTCGATCGCAACCCAAGCAAACACTTTTCGCCATCACCCCC TTTGTTTACACCCGCTCTTTCCAGCTTGGTGCTACAACAACCAGGCAGAA GTCGGAGGAGCACTTGCGGCCGCTTTCAAGGACAACAGCATCATCAGGGA AAACCTGTTCATCACGACCAAGGTACGGCGAGGCTCGAGGAGAACGCGGC ATGAAGTCGACCCACGCTGCCGAAAACTTGTGTCGTTGATTCGCACGACT CCCTGGTCCGCCTGAAGATGGCCTGGATGACCGTCATTCACACCACAGCG CTGCACCTCCGACCTTGCTCTTGTTCCAGCTTTGGAATACGTTTCACAGG CCTGCGTTGCTTCGTAAGAACATGGAGACCTGCCTCAAGGACCTACGACT ACCCTGGGTAGACATGGTCCAACTCCACTACTCATTCGCGATGATCCCGG TGGCGGACGAGACGTGAGTGCTTACTACTCTTGCGCCCTCCTTCATGGCA TCAGCACACCCCGTGAGCCTATGCGAGGTAGCGTATGCTCAATGATGTTT ACTTTTTGTTCGATTGGCGTCTCCTTCCCGCATCTCCCTCTTCACCCACT CAGAATCTTGGTTCCGCGCCATGAAAATGGTGATGCTCATCTAGACGACC AGGTCACACTCAAGCAAACGTGGAAGGCGGTGAGTGGTGGTGCGGCGACA GTTTGTCGTACAGATCCCACCTGTAGAGGTACATCATGGGCCCCGCAACG GTGTGCGCTCTTTGTAGTGAATGAATTGTAGGTCTGCCTTCTTCTCCTTT TCATGCTTAGGGGTCGACGCGCGTGCCTCGAGGGTGATTTCATTGATGCT TCACCTAGGTTCAACACTCGCATCGATCTCGCTTCCACACGAATTAGTTC CGCAAGCTCTTACTTCGTATCGTTTACCCCTTACGAACACATCGACGAAA CTAGTTTTTTTTTATATGCCCTTGTACCGTCGCTGCAGATGGAGGGTTTC GTCGAGGGTGGGCTTGCCAAATCCATCGGAGTCTCGAACTTCACAAAGGT ACTGTTATGCCCCGAGAGGATCTTCAGTTTCATTCCTAGTACGCAAGTTT GATCGTCAAGGCCAACTAGTAGGCACGTGATTTTTTTGTTTCGCGAGTTG GCCCGGCCTCTCGCGTAAGCGCTAGCTTCCATCCGCTCAATGATCACCGA TACATACAAACAGATTAACGAACCAACAAGGCACAAAAACGACAAGTATT GCAATTGGTGATGACGCAGTTTCAGAAGGTACAGCAAGTTCGAAAGTTCG AACTTGGGTACTGTTGAAGATGCTTCTGATCCTTTTTCGTGTTTTCGCTT CATCAGCGTTGCTTTTCCCGAAATTGACCACCGACTCATTTGCCGCGTAT GCCCAAGCAAAACAAATGTCCGTGGATGTTTCTTGCAGGAGGAGCTAGCC CATGTGATGGAAGATGCCAAGATAATGCCATCAGTACTGCAAGTGGAGGT AGGTTTGGCGGTGGTGCGCTGCTGCAGCATCTTCGAGGTCGGTAGACTGT TTTCGTAGCTGTTCGAGCACGCAACAGACCTGTCATTTGTCGTTTCTGAC GGGTTCACTAGCCTGAGTGTAGTGCGCGGGGTTTATTCGAATGTTTCATG TAGCTCATATCACCATGCCTGCTATGTAGCACCTTCTCGTTGCAACGTGG CTGGTGGTACGCGCGGTACTGTCCGTGTTGCTACTGTCGTGGCAAGGGGA CGCGTGTACCGGTTCGTTCGATGGAAGATTTGTGCAGAAACGATCATTCG CACTAAAGTTTGCCGATCACGCCACCACGTCGTTGCCCTCTATGCTGGTT AATCGTTTGCGTTGCAGATGCACCCGTATCTCAACAACGCAGAACTGCTT GACTGGTGCAAGGAGAAAGGCATACACGTTACCGCTTATGGTAAGTGCTC GCCCCCTACCTCAAAGGGGCGTGCAGAACGACAGTGGTCATGTGTTTTTT CATGTGTCATGTGCTTTGAAGGCACGTTCGGCTGCATTTTTTTGATGAGA TACCTGATCGATCAAGGGTTGCCCAAAATGTGCTGCCCAATGATACGGAC CCTTTCTGGCGCGCCCAAAAAATTGCTTGTCACGACTTCGGTCCCAGTAT ATCGTGCGGGTAACGCACTTGAATCCAGAACTCACACCTTTTGTGTATTC CGGTACAGTAGGTTCCGCATGTGGGCGAGTAGATGCCGCGCACGCGCTCC CGGGTTGCGTTCACGCGCGGTAGGCGTGACTAACACGGTGTGCCTCGTAC TCTGGATATGAGCTGTACAAAGAAAACTCGTGTGTTATGATTTGCAGTGT GCGTGCAATACTAGCACACCACACATTGTTGCTTCCTTCAGACCATAATC TCGTACTCCGTATTTGCTTCCTCCTGGGAGGGAATTTTCGGCAGAAGTAG ATGTAGGTGGCCACAAAAAGGATGTTATCGAACACACTTGCAAGGCTTCC CTGGCTTCCCTGGCGGAAGTCCTCTCGGGGTTGTTTTGTAATCACTGCAC GCGCACCAACACACACACCCGTACAAGATGCACCATCTACTCCTCGTGCT GCTATTCGTCTTTCCTCTTTCTCGCAAGCCCAAATTTCTCAAACCAGAAG CACATTTTGTCAGTTTTTCTCGGAAATCCAACAGGCCTTCGGGATATCTT TTCATGCTCTTTGTATATAGCCTTCAG
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Coding sequence (CDS) from alignment at S-firma_F_contig10485:1791..4867+

>mRNA_S-firma_F_contig10485.683.1 ID=mRNA_S-firma_F_contig10485.683.1|Name=mRNA_S-firma_F_contig10485.683.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1464bp|location=Sequence derived from alignment at S-firma_F_contig10485:1791..4867+ (Sphaerotrichia firma ET2_F female)
ATGGAGACCTGCCTCAAGGACCTACGACTACCCTGGGTAGACATGGTCCA
ACTCCACTACTCATTCGCGATGATCCCGGTGGCGGACGAGACATGGAGAC
CTGCCTCAAGGACCTACGACTACCCTGGGTAGACATGGTCCAACTCCACT
ACTCATTCGCGATGATCCCGGTGGCGGACGAGACAATCTTGGTTCCGCGC
CATGAAAATGGTGATGCTCATCTAGACGACCAGGTCACACTCAAGCAAAC
GTGGAAGGCGAATCTTGGTTCCGCGCCATGAAAATGGTGATGCTCATCTA
GACGACCAGGTCACACTCAAGCAAACGTGGAAGGCGATGGAGGGTTTCGT
CGAGGGTGGGCTTGCCAAATCCATCGGAGTCTCGAACTTCACAAAGATGG
AGGGTTTCGTCGAGGGTGGGCTTGCCAAATCCATCGGAGTCTCGAACTTC
ACAAAGGAGGAGCTAGCCCATGTGATGGAAGATGCCAAGATAATGCCATC
AGTACTGCAAGTGGAGGAGGAGCTAGCCCATGTGATGGAAGATGCCAAGA
TAATGCCATCAGTACTGCAAGTGGAGATGCACCCGTATCTCAACAACGCA
GAACTGCTTGACTGGTGCAAGGAGAAAGGCATACACGTTACCGCTTATGG
TAAGTGCTCGCCCCCTACCTCAAAGGGGCGTGCAGAACGACAGTGGTCAT
GTGTTTTTTCATGTGTCATGTGCTTTGAAGGCACGTTCGGCTGCATTTTT
TTGATGAGATACCTGATCGATCAAGGGTTGCCCAAAATGTGCTGCCCAAT
GATACGGACCCTTTCTGGCGCGCCCAAAAAATTGCTTGTCACGACTTCGG
TCCCAGTATATCGTGCGGGTAACGCACTTGAATCCAGAACTCACACCTTT
TGTGTATTCCGGTACAGTAGGTTCCGCATGTGGGCGAGTAGATGCCGCGC
ACGCGCTCCCGGGTTGCGTTCACGCGCGGTAGGCGTGACTAACACGGTGT
GCCTCGTACTCTGGATATGAATGCACCCGTATCTCAACAACGCAGAACTG
CTTGACTGGTGCAAGGAGAAAGGCATACACGTTACCGCTTATGGTAAGTG
CTCGCCCCCTACCTCAAAGGGGCGTGCAGAACGACAGTGGTCATGTGTTT
TTTCATGTGTCATGTGCTTTGAAGGCACGTTCGGCTGCATTTTTTTGATG
AGATACCTGATCGATCAAGGGTTGCCCAAAATGTGCTGCCCAATGATACG
GACCCTTTCTGGCGCGCCCAAAAAATTGCTTGTCACGACTTCGGTCCCAG
TATATCGTGCGGGTAACGCACTTGAATCCAGAACTCACACCTTTTGTGTA
TTCCGGTACAGTAGGTTCCGCATGTGGGCGAGTAGATGCCGCGCACGCGC
TCCCGGGTTGCGTTCACGCGCGGTAGGCGTGACTAACACGGTGTGCCTCG
TACTCTGGATATGA
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