mRNA_S-firma_F_contig10480.675.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10480.675.1
Unique NamemRNA_S-firma_F_contig10480.675.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
[Close]
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: A0A7L4BQZ1_9AVES (Mevalonate kinase (Fragment) n=6 Tax=Neognathae TaxID=8825 RepID=A0A7L4BQZ1_9AVES)

HSP 1 Score: 186 bits (472), Expect = 1.960e-54
Identity = 113/266 (42.48%), Postives = 155/266 (58.27%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISE--RFVALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLA-PAGSEDRVPALEADLKALGYQIYESTAGGPGVLIHST 789
            LP  AGLGSSAA++V  A A+L     +   LK G   A                 R+P+ + L +IN W++  E + HG PSG+DNAV  +GGAL Y  Q   I  L  +P +R+++TNTKVP+ TK LVAGV+    K PA+++P+LD+I+AIS+  + V  A  +    +    +  L D NQ  LN +GVGH S+  LC  +  HG+ SKLTGAGGGGCG TL  P  S   V A + DL A G++ +E+  G PGV +HS+
Sbjct:   23 LPTGAGLGSSAAYAVCLAGALLSACGAISCPLKEGESTA-----------------RWPEEE-LNLINSWAFQGERVIHGNPSGVDNAVGTWGGALRY--QSGKITPLKRVPTLRILLTNTKVPRSTKILVAGVKEKILKFPAIMNPVLDSIDAISQECQSVLEAMPANPSPECYPVLEELFDINQHHLNVMGVGHPSLDRLCQVTMSHGLHSKLTGAGGGGCGITLLRPDTSPLAVEAAKGDLSACGFECWETNIGAPGVTLHSS 268
[Close]
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: A0A7L1KDL8_RYNNI (Mevalonate kinase (Fragment) n=1 Tax=Rynchops niger TaxID=227184 RepID=A0A7L1KDL8_RYNNI)

HSP 1 Score: 186 bits (472), Expect = 1.960e-54
Identity = 114/266 (42.86%), Postives = 156/266 (58.65%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISE--RFVALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLA-PAGSEDRVPALEADLKALGYQIYESTAGGPGVLIHST 789
            LP  AGLGSSAA++V  AAA+L +   +   LK G   A                 R+ + + L +IN W++  E + HG PSG+DNAV  +GGAL Y  Q   I  L  +P +R+++TNTKVP+ TK LVAGV+    K PA+++P+LD+I+AISE  + V  A  +    +    +  L D NQ  LN +GVGH S+  LC  +  HG+ SKLTGAGGGGCG TL  P  S   V A + DL A G++ +E+  G PGV +HS+
Sbjct:   23 LPTGAGLGSSAAYAVCLAAALLTVCGAISCPLKEGESTA-----------------RWTEEE-LTLINSWAFQGERVIHGNPSGVDNAVGTWGGALRY--QSGKITPLKRVPTLRILLTNTKVPRSTKILVAGVKEKILKFPAIMNPVLDSIDAISEECQSVLEAMPANPSPEYYTVLEELFDINQHHLNVIGVGHPSLDRLCRVTASHGLYSKLTGAGGGGCGITLLRPDTSPQAVEAAKRDLCACGFECWETNIGAPGVTLHSS 268
[Close]
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: A0A7K8LJJ8_9GRUI (Mevalonate kinase (Fragment) n=1 Tax=Ardeotis kori TaxID=89386 RepID=A0A7K8LJJ8_9GRUI)

HSP 1 Score: 186 bits (471), Expect = 2.470e-54
Identity = 115/265 (43.40%), Postives = 154/265 (58.11%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISE--RFVALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLA-PAGSEDRVPALEADLKALGYQIYESTAGGPGVLIHS 786
            LP  AGLGSSAA++V  AAA+L     +   LK G              +P  R       D L +IN W++  E + HG PSG+DNAV  +GGAL Y  Q   I  L  +P +R+++TNTKVP+ TK LVAGV+    K PA+++P+LD+I+AIS+  + V  A  +   +D    +  L D NQ  LN +GVGH S+  LC  +  HG+ SKLTGAGGGGCG TL  P  S   V A + DL A G++ +E+  G PGV +HS
Sbjct:   19 LPTGAGLGSSAAYAVCLAAALLTACGAISCPLKEG--------------EPTARW----TEDELTLINSWAFQGERVIHGNPSGVDNAVGTWGGALRY--QSGKITPLKRVPTLRILLTNTKVPRSTKVLVAGVKEKILKFPAIMNPVLDSIDAISQECQSVLEAMPANPSLDYYPVLEELFDINQHHLNVIGVGHPSLDRLCRLTASHGLHSKLTGAGGGGCGITLLRPDTSPLAVEAAKRDLCACGFECWETNIGAPGVTLHS 263
[Close]
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: F6VQR5_MONDO (Mevalonate kinase n=3 Tax=Didelphinae TaxID=126287 RepID=F6VQR5_MONDO)

HSP 1 Score: 189 bits (479), Expect = 3.640e-54
Identity = 112/265 (42.26%), Postives = 159/265 (60.00%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISERF--VALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLAPAGSEDRV-PALEADLKALGYQIYESTAGGPGVLIHS 786
            LP  AGLGSSAA+SV  AAA+L    ++   LK G  +A  +                   D L +IN W++  E + HG PSG+DN+VS +GGAL +  Q  +I  L  +P +++++TNTKVP+ TKALVA V+    K P +++P+L +I+AIS+    V    ++T   +    +  LID NQ  LNA+GVGH S+  LC  +  HG+ SKLTGAGGGGCGFTL   G +  V  A++  L + G++ +E+T GGPGV +HS
Sbjct:  137 LPTGAGLGSSAAYSVCLAAALLASCEEIMNRLKEGATSARWN------------------EDELNLINRWAFLGEKVIHGNPSGVDNSVSTWGGALRF--QKGNISSLQRIPVLKILLTNTKVPRSTKALVASVKDRLAKFPEIMNPLLVSIDAISQECERVLGVMAATPTPEQYMVLEELIDMNQHHLNAIGVGHSSLDRLCQVTAAHGLHSKLTGAGGGGCGFTLLRPGLDQSVVEAIKQALTSCGFECWETTIGGPGVSLHS 381
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BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: A0A7L3U0X2_URIAL (Mevalonate kinase (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L3U0X2_URIAL)

HSP 1 Score: 184 bits (467), Expect = 1.010e-53
Identity = 112/266 (42.11%), Postives = 156/266 (58.65%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISE--RFVALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLA-PAGSEDRVPALEADLKALGYQIYESTAGGPGVLIHST 789
            LP  AGLGSSAA++V  AAA+L +   +   LK G   A                 R+ + + + +IN W++  E + HG PSG+DNAV  +GGAL Y  Q   I  L  +P +R+++TNTKVP+ TK LVAGV+    K PA+++P+LD+I+AIS+  + V  A  +    +    +  L D NQ  LN +GVGH S+  LC  +  HG+ SKLTGAGGGGCG TL  P  S   V A + DL A G++ +E+  G PGV +HS+
Sbjct:   20 LPTGAGLGSSAAYAVCLAAALLTVCGAISCPLKEGESTA-----------------RWTEEE-MTLINSWAFQGERVIHGNPSGVDNAVGTWGGALRY--QSGKITPLKRVPTLRILLTNTKVPRSTKILVAGVKEKILKFPAIMNPVLDSIDAISQECQSVLEAMPANPSPEYYPVLEELFDINQHHLNVIGVGHPSLDRLCRVTASHGLHSKLTGAGGGGCGITLLRPDTSPQAVEAAKRDLCACGFECWETNIGAPGVTLHSS 265
[Close]
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: A0A7K6Z187_ALCTO (Mevalonate kinase (Fragment) n=2 Tax=Charadriiformes TaxID=8906 RepID=A0A7K6Z187_ALCTO)

HSP 1 Score: 184 bits (467), Expect = 1.100e-53
Identity = 112/266 (42.11%), Postives = 156/266 (58.65%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISE--RFVALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLA-PAGSEDRVPALEADLKALGYQIYESTAGGPGVLIHST 789
            LP  AGLGSSAA++V  AAA+L +   +   LK G   A                 R+ + + + +IN W++  E + HG PSG+DNAV  +GGAL Y  Q   I  L  +P +R+++TNTKVP+ TK LVAGV+    K PA+++P+LD+I+AIS+  + V  A  +    +    +  L D NQ  LN +GVGH S+  LC  +  HG+ SKLTGAGGGGCG TL  P  S   V A + DL A G++ +E+  G PGV +HS+
Sbjct:   23 LPTGAGLGSSAAYAVCLAAALLTVCGAISCPLKEGESTA-----------------RWTEEE-MTLINSWAFQGERVIHGNPSGVDNAVGTWGGALRY--QSGKITPLKRVPTLRILLTNTKVPRSTKILVAGVKEKILKFPAIMNPVLDSIDAISQECQSVLEAMPANPSPEYYPVLEELFDINQHHLNVIGVGHPSLDRLCRVTASHGLHSKLTGAGGGGCGITLLRPDTSPQAVEAAKRDLCACGFECWETNIGAPGVTLHSS 268
[Close]
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: A0A7L1NQT1_RHICY (Mevalonate kinase (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1NQT1_RHICY)

HSP 1 Score: 184 bits (467), Expect = 1.100e-53
Identity = 113/266 (42.48%), Postives = 156/266 (58.65%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISERFVAL--ASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLA-PAGSEDRVPALEADLKALGYQIYESTAGGPGVLIHST 789
            LP  AGLGSSAA++V  AAA+L     V   LK G   A                 R+P+ + L +IN W++  E + HG PSG+DNAV  +GGAL Y  Q   I  L  +P +R+++TNTKVP+ TK LVA  +    K PA+++P+LD+I+AIS++  ++  A  +    D    +  L D NQ  LN +GVGH S+  LC  +  HG+ SKLTGAGGGGCG TL  P  SE  V A + DL A G++ +E++ G PGV +H +
Sbjct:   23 LPTGAGLGSSAAYAVCLAAALLLACGAVSCPLKEGDSTA-----------------RWPEEE-LALINSWAFQGERVIHGNPSGVDNAVGTWGGALRY--QSGEITPLKRVPMLRILLTNTKVPRSTKVLVASAKEKMLKFPAIMNPVLDSIDAISQQCQSVLEAMPAEPSPDCYPVLEELFDINQHHLNVMGVGHPSLDRLCRVTASHGLHSKLTGAGGGGCGITLLRPDTSELAVEAAKQDLCACGFECWETSVGAPGVTLHGS 268
[Close]
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: A0A7L1T6Q0_ARAGA (Mevalonate kinase (Fragment) n=7 Tax=Neognathae TaxID=8825 RepID=A0A7L1T6Q0_ARAGA)

HSP 1 Score: 183 bits (465), Expect = 2.200e-53
Identity = 113/266 (42.48%), Postives = 156/266 (58.65%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISE--RFVALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLA-PAGSEDRVPALEADLKALGYQIYESTAGGPGVLIHST 789
            LP  AGLGSSAA++V  AAA+L     +   LK G  +A                 R+ + + L +IN W++  E + HG PSG+DNAV  +GGAL Y S    I  L  +P +R+++TNTKVP+ TK LVAGV+    K PA+++P+LD+I+AIS+  + V  A  +    +    +  L D NQ  LN +GVGH S+  LC  +  HG+ SKLTGAGGGGCG TL  P  S   V A + DL A G++ +E+  G PGV +HS+
Sbjct:   23 LPTGAGLGSSAAYAVCLAAALLTAFGAISCPLKEGESSA-----------------RWTEEE-LTLINSWAFQGERVIHGNPSGVDNAVGTWGGALRYESG--KITPLKRVPMLRILLTNTKVPRSTKVLVAGVKEKILKFPAIMNPVLDSIDAISQECQSVLEAMPANPSPEYYPVLEELFDINQHHLNVIGVGHPSLDRLCRVTASHGLHSKLTGAGGGGCGITLLRPDTSPLAVEAAKRDLCACGFECWETNIGAPGVTLHSS 268
[Close]
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: A0A091HL50_CALAN (Mevalonate kinase (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A091HL50_CALAN)

HSP 1 Score: 186 bits (473), Expect = 3.050e-53
Identity = 113/266 (42.48%), Postives = 156/266 (58.65%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISE--RFVALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLA-PAGSEDRVPALEADLKALGYQIYESTAGGPGVLIHST 789
            LP  AGLGSSAA++V  AAA+L     +   +K G   A                 R+ + + L +IN W++  E + HG PSG+DNAV  +GGAL Y  Q   I  L  +P +R+++TNTKVP+ TK LVAGV+    K PA+++P+LD+I+AIS+  + V  A  +    +    +  L D NQ  LN +GVGH S+  LC  +  HG+ SKLTGAGGGGCG TL  P  S   V A + DL A G++ +E+  GGPGV +HS+
Sbjct:  141 LPTGAGLGSSAAYAVCLAAALLTASGAISCPMKEGDSTA-----------------RWTEEE-LSVINSWAFQGERVIHGNPSGVDNAVGTWGGALRY--QSGKITPLKRVPTLRILLTNTKVPRSTKVLVAGVKEKILKFPAIMNPVLDSIDAISQECQSVLEAMPANPSAEYYPVLEDLFDINQHHLNVMGVGHPSLDRLCQVTASHGLHSKLTGAGGGGCGITLLRPDTSPLAVEAAKQDLCACGFECWETNIGGPGVTLHSS 386
[Close]
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Match: A0A7K6SR13_CALNI (Mevalonate kinase (Fragment) n=6 Tax=Neognathae TaxID=8825 RepID=A0A7K6SR13_CALNI)

HSP 1 Score: 183 bits (464), Expect = 3.110e-53
Identity = 116/269 (43.12%), Postives = 158/269 (58.74%), Query Frame = 1 
Query:    1 LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKADPQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVSQPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILDAIEAISERF-----VALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITALCSASKRHGMSSKLTGAGGGGCGFTLA-PAGSEDRVPALEADLKALGYQIYESTAGGPGVLIHST 789
            LP  AGLGSSAA++V  AAA+L     +   LK G   A                 R+ + + L +IN W++  E + HG PSG+DNAV  +GGAL Y  Q   I  L  +P +R+++TNTKVP+ TK LVAGV+    K PA+++P+LD+I+AIS+       V  A+SS E   V   +  L D NQ  LN +GVGH S+  LC  +  HG+ SKLTGAGGGGCG TL  P  S   + A + DL A G++ +E++ G PGV +HS+
Sbjct:   23 LPTGAGLGSSAAYAVCLAAALLSACRAISCPLKEGESTA-----------------RWTEEE-LTLINSWAFQGERVIHGNPSGVDNAVGTWGGALRY--QSGKITPLKRVPMLRILLTNTKVPRSTKVLVAGVKEKILKFPAIMNPVLDSIDAISQECQSVLEVMSANSSPEHYPV---LEELFDINQHHLNVIGVGHPSLDRLCRVTASHGLHSKLTGAGGGGCGITLLRPDTSALAMEAAKRDLCACGFECWETSIGAPGVTLHSS 268
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10480.675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L4BQZ1_9AVES1.960e-5442.48Mevalonate kinase (Fragment) n=6 Tax=Neognathae Ta... [more]
A0A7L1KDL8_RYNNI1.960e-5442.86Mevalonate kinase (Fragment) n=1 Tax=Rynchops nige... [more]
A0A7K8LJJ8_9GRUI2.470e-5443.40Mevalonate kinase (Fragment) n=1 Tax=Ardeotis kori... [more]
F6VQR5_MONDO3.640e-5442.26Mevalonate kinase n=3 Tax=Didelphinae TaxID=126287... [more]
A0A7L3U0X2_URIAL1.010e-5342.11Mevalonate kinase (Fragment) n=2 Tax=Neognathae Ta... [more]
A0A7K6Z187_ALCTO1.100e-5342.11Mevalonate kinase (Fragment) n=2 Tax=Charadriiform... [more]
A0A7L1NQT1_RHICY1.100e-5342.48Mevalonate kinase (Fragment) n=1 Tax=Rhinopomastus... [more]
A0A7L1T6Q0_ARAGA2.200e-5342.48Mevalonate kinase (Fragment) n=7 Tax=Neognathae Ta... [more]
A0A091HL50_CALAN3.050e-5342.48Mevalonate kinase (Fragment) n=4 Tax=Neognathae Ta... [more]
A0A7K6SR13_CALNI3.110e-5343.12Mevalonate kinase (Fragment) n=6 Tax=Neognathae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10480contigS-firma_F_contig10480:394..1475 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog13616.ENSMODP00000005543
Preferred nameMVK
PFAMsGHMP_kinases_C,GHMP_kinases_N
Max annot lvl33208|Metazoa
KEGG rclassRC00002,RC00017
KEGG koko:K00869
KEGG ReactionR02245
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146
KEGG ModuleM00095
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004496,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0006066,GO:0006084,GO:0006139,GO:0006163,GO:0006417,GO:0006629,GO:0006637,GO:0006644,GO:0006694,GO:0006695,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016125,GO:0016126,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017148,GO:0019216,GO:0019218,GO:0019222,GO:0019287,GO:0019637,GO:0019693,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031347,GO:0031348,GO:0032101,GO:0032102,GO:0032268,GO:0032269,GO:0032553,GO:0032555,GO:0032559,GO:0033865,GO:0033875,GO:0034032,GO:0034248,GO:0034249,GO:0034641,GO:0035383,GO:0035639,GO:0036094,GO:0042579,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045540,GO:0046165,GO:0046483,GO:0046490,GO:0046872,GO:0046890,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050727,GO:0050728,GO:0050789,GO:0050794,GO:0050810,GO:0051171,GO:0051172,GO:0051186,GO:0051246,GO:0051248,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072521,GO:0080090,GO:0080134,GO:0090181,GO:0090407,GO:0097159,GO:0097367,GO:0106118,GO:1901135,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930,GO:1990825,GO:2000112,GO:2000113
Evalue5.97e-55
EggNOG OGsCOG1577@1|root,KOG1511@2759|Eukaryota,38EJ2@33154|Opisthokonta,3BCQA@33208|Metazoa,3CSVD@33213|Bilateria,47ZY8@7711|Chordata,494KA@7742|Vertebrata,3J7M0@40674|Mammalia,4JZC8@9263|Metatheria
EC2.7.1.36
DescriptionBelongs to the GHMP kinase family. Mevalonate kinase subfamily
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorysignal peptide
Exons3
Model size795
Cds size795
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10480.675.1prot_S-firma_F_contig10480.675.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10480 394..1475 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815582.774395-CDS-S-firma_F_contig10480:393..6651622815582.774395-CDS-S-firma_F_contig10480:393..665Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10480 394..665 +
1696949433.2059002-CDS-S-firma_F_contig10480:393..6651696949433.2059002-CDS-S-firma_F_contig10480:393..665Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10480 394..665 +
1622815582.7840016-CDS-S-firma_F_contig10480:893..12381622815582.7840016-CDS-S-firma_F_contig10480:893..1238Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10480 894..1238 +
1696949433.221894-CDS-S-firma_F_contig10480:893..12381696949433.221894-CDS-S-firma_F_contig10480:893..1238Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10480 894..1238 +
1622815582.7979033-CDS-S-firma_F_contig10480:1297..14751622815582.7979033-CDS-S-firma_F_contig10480:1297..1475Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10480 1298..1475 +
1696949433.23691-CDS-S-firma_F_contig10480:1297..14751696949433.23691-CDS-S-firma_F_contig10480:1297..1475Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10480 1298..1475 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10480.675.1

>prot_S-firma_F_contig10480.675.1 ID=prot_S-firma_F_contig10480.675.1|Name=mRNA_S-firma_F_contig10480.675.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=265bp
LPVAAGLGSSAAFSVATAAAILDLHAQVFGGLKHGVVAADADVVDMSKAD
PQFRGGRFPQRDFLPIINEWSYCAEVLFHGRPSGLDNAVSCYGGALSYVS
QPKHIDHLPSMPPMRLVVTNTKVPKDTKALVAGVRVLHDKMPAVVDPILD
AIEAISERFVALASSSTEGVDVDATVGSLIDFNQGLLNALGVGHDSITAL
CSASKRHGMSSKLTGAGGGGCGFTLAPAGSEDRVPALEADLKALGYQIYE
STAGGPGVLIHSTL*
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mRNA from alignment at S-firma_F_contig10480:394..1475+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10480.675.1 ID=mRNA_S-firma_F_contig10480.675.1|Name=mRNA_S-firma_F_contig10480.675.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1082bp|location=Sequence derived from alignment at S-firma_F_contig10480:394..1475+ (Sphaerotrichia firma ET2_F female)
CTGCCCGTGGCTGCAGGGCTGGGGTCCTCCGCCGCCTTTTCCGTGGCCAC
TGCGGCTGCCATTTTGGACCTGCACGCCCAGGTGTTCGGCGGCCTGAAGC
ACGGCGTGGTTGCCGCCGACGCTGACGTTGTGGACATGAGCAAGGCCGAC
CCGCAGTTCAGAGGGGGGCGTTTCCCGCAGCGCGACTTTTTGCCCATCAT
CAACGAGTGGAGTTACTGTGCGGAGGTGCTGTTCCACGGCCGTCCCAGTG
GGCTGGACAACGCCGTCAGCTGGTGGGTTGCGTGTGTGTGTTTCCTGGAC
ATTCTCTAAGCCAGCTCCTCCACCCCCCCCCCCCCTCCCCCCCCCCCCCC
CACTCACCGCCACCACCTCCACCACCCGCCATCACCATCAACACACAAAA
AAAAAAAATAACNNNNNNNNNNCCGTGCGGGTGGGGGTTGGTTGTGTTTT
TTTTTTTTTTTTTTTTTTCTCCCGCTCCCCCCCCCCCCCCCCCCCCACAG
CTACGGCGGCGCGCTGTCCTACGTGAGCCAGCCCAAGCACATTGACCATC
TGCCGTCGATGCCCCCCATGCGGCTTGTCGTCACCAACACCAAGGTCCCC
AAGGACACAAAGGCCCTCGTCGCCGGCGTCCGCGTCCTCCACGACAAGAT
GCCAGCAGTCGTGGACCCCATCCTGGACGCCATTGAGGCCATTTCCGAGC
GCTTCGTTGCCCTCGCCAGCAGCAGCACGGAGGGTGTGGACGTCGACGCC
ACCGTGGGCTCCCTCATTGACTTCAACCAGGGCCTCCTCAACGCCCTTGG
CGTCGGCCACGACAGCATCACCGCACTGTGCTCGGCGTCCAAGCGGTGGG
CTTTGAGTGTTTTCCTGCTGCTTACACGCTTTGTGCTTACGTTGAACCGC
CCAGGCATGGCATGAGTAGCAAGCTGACGGGCGCTGGTGGCGGCGGCTGC
GGCTTTACCCTCGCACCCGCCGGCTCCGAGGACCGCGTGCCGGCCCTTGA
GGCGGACCTGAAGGCCCTGGGGTACCAAATCTACGAAAGCACGGCAGGCG
GGCCCGGCGTACTCATTCACTCCACGCTGTAG
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Coding sequence (CDS) from alignment at S-firma_F_contig10480:394..1475+

>mRNA_S-firma_F_contig10480.675.1 ID=mRNA_S-firma_F_contig10480.675.1|Name=mRNA_S-firma_F_contig10480.675.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1590bp|location=Sequence derived from alignment at S-firma_F_contig10480:394..1475+ (Sphaerotrichia firma ET2_F female)
CTGCCCGTGGCTGCAGGGCTGGGGTCCTCCGCCGCCTTTTCCGTGGCCAC
TGCGGCTGCCATTTTGGACCTGCACGCCCAGGTGTTCGGCGGCCTGAAGC
ACGGCGTGGTTGCCGCCGACGCTGACGTTGTGGACATGAGCAAGGCCGAC
CCGCAGTTCAGAGGGGGGCGTTTCCCGCAGCGCGACTTTTTGCCCATCAT
CAACGAGTGGAGTTACTGTGCGGAGGTGCTGTTCCACGGCCGTCCCAGTG
GGCTGGACAACGCCGTCAGCTGCTGCCCGTGGCTGCAGGGCTGGGGTCCT
CCGCCGCCTTTTCCGTGGCCACTGCGGCTGCCATTTTGGACCTGCACGCC
CAGGTGTTCGGCGGCCTGAAGCACGGCGTGGTTGCCGCCGACGCTGACGT
TGTGGACATGAGCAAGGCCGACCCGCAGTTCAGAGGGGGGCGTTTCCCGC
AGCGCGACTTTTTGCCCATCATCAACGAGTGGAGTTACTGTGCGGAGGTG
CTGTTCCACGGCCGTCCCAGTGGGCTGGACAACGCCGTCAGCTGCTACGG
CGGCGCGCTGTCCTACGTGAGCCAGCCCAAGCACATTGACCATCTGCCGT
CGATGCCCCCCATGCGGCTTGTCGTCACCAACACCAAGGTCCCCAAGGAC
ACAAAGGCCCTCGTCGCCGGCGTCCGCGTCCTCCACGACAAGATGCCAGC
AGTCGTGGACCCCATCCTGGACGCCATTGAGGCCATTTCCGAGCGCTTCG
TTGCCCTCGCCAGCAGCAGCACGGAGGGTGTGGACGTCGACGCCACCGTG
GGCTCCCTCATTGACTTCAACCAGGGCCTCCTCAACGCCCTTGGCGTCGG
CCACGACAGCATCACCGCACTGTGCTCGGCGTCCAAGCGCTACGGCGGCG
CGCTGTCCTACGTGAGCCAGCCCAAGCACATTGACCATCTGCCGTCGATG
CCCCCCATGCGGCTTGTCGTCACCAACACCAAGGTCCCCAAGGACACAAA
GGCCCTCGTCGCCGGCGTCCGCGTCCTCCACGACAAGATGCCAGCAGTCG
TGGACCCCATCCTGGACGCCATTGAGGCCATTTCCGAGCGCTTCGTTGCC
CTCGCCAGCAGCAGCACGGAGGGTGTGGACGTCGACGCCACCGTGGGCTC
CCTCATTGACTTCAACCAGGGCCTCCTCAACGCCCTTGGCGTCGGCCACG
ACAGCATCACCGCACTGTGCTCGGCGTCCAAGCGGCATGGCATGAGTAGC
AAGCTGACGGGCGCTGGTGGCGGCGGCTGCGGCTTTACCCTCGCACCCGC
CGGCTCCGAGGACCGCGTGCCGGCCCTTGAGGCGGACCTGAAGGCCCTGG
GGTACCAAATCTACGAAAGCACGGCAGGCGGGCCCGGCGTACTCATTCAC
TCCACGCTGTAGGCATGGCATGAGTAGCAAGCTGACGGGCGCTGGTGGCG
GCGGCTGCGGCTTTACCCTCGCACCCGCCGGCTCCGAGGACCGCGTGCCG
GCCCTTGAGGCGGACCTGAAGGCCCTGGGGTACCAAATCTACGAAAGCAC
GGCAGGCGGGCCCGGCGTACTCATTCACTCCACGCTGTAG
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