mRNA_S-firma_F_contig1047.660.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1047.660.1
Unique NamemRNA_S-firma_F_contig1047.660.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A6H5KGH1_9PHAE (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGH1_9PHAE)

HSP 1 Score: 543 bits (1398), Expect = 8.940e-184
Identity = 284/365 (77.81%), Postives = 323/365 (88.49%), Query Frame = 2
Query:    2 YFFGVGADVEIITEDIDYFAFQGDLAGVSAKLSGFGADASPYIQDPATTGTFFSWYDDLVVYAEAEGTATLVPST--DGEHTIFADEPEFQSTLEAFLVSPDGLRYSTSVVMQEDGTINAAAMQAEYSGDINGEANKQVDAMVDFRKLVDGLEFEAFPWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDERMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPASYSSSAST--EKGQVQAVVTPLGNTASNSKVSPSEGR 1084
            YF  VGADVE++TE IDYF+ Q +LA VSAKL+GFG D SPYIQDPAT+GTFFSW+DDL+VYAEAEGTATLVPST   GE+T+F+DE EFQS+L AFL S DG++YS +VV ++DG+I AAA+Q+EYSG+ING+A KQVDAMVD R L+D   FEAFPWS  Y QWETFQIIYQELYQGLGLCLA V +LTL+LIAHP +AGLVFLMVTFTIVDVLGIMY+WGL+IDT+AVINLVLAVGLSVDYAAHVAHSF +KTGTRDER VQA++DIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGP+SY ++     +KG +QA VTP+G+ A NSKVSPSEGR
Sbjct:  546 YFGSVGADVEVVTEGIDYFSLQAELADVSAKLTGFGDDTSPYIQDPATSGTFFSWFDDLIVYAEAEGTATLVPSTAFGGEYTVFSDETEFQSSLAAFLASDDGIKYSANVVFEDDGSIRAAAIQSEYSGNINGDAAKQVDAMVDLRSLMDEWSFEAFPWSGRYFQWETFQIIYQELYQGLGLCLAVVLVLTLVLIAHPATAGLVFLMVTFTIVDVLGIMYYWGLSIDTIAVINLVLAVGLSVDYAAHVAHSFMVKTGTRDERAVQALADIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPSSYRAADGDLKKKGHIQAAVTPVGSGA-NSKVSPSEGR 909          
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A7S2Y3B3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3B3_9STRA)

HSP 1 Score: 284 bits (727), Expect = 5.350e-89
Identity = 176/345 (51.01%), Postives = 229/345 (66.38%), Query Frame = 2
Query:    2 YFFGVGADVEIITEDIDYFAFQGDLAGVSAKLSGFGADASPYIQDPATTG-TFFSWYDDLVVYAEA--EGTATLVPSTDGEHTIFADEPEFQSTLEAFLVSPDGLRYSTSVVMQEDG-TINAAAMQAEY-------SGDINGEANKQVDAMVDFRKLVDGLEFEAFPWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDERMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPASYSSSAST 1003
            YF   G D++I+T ++DYF  Q  LA + ++L G   D SPYI+D  T G ++ SWYD  V +     +G   L P T        DE +F   L  FL  P G  Y++ V + ED  +I A+ + A+Y        G +  +A K+V AM D RK+VD     AFPW  +Y  WETF+II QEL QGL LCL AVF+L L+L+AHPL+A LV L V  T+VD+LG+MYFW L ID V V+ +VL+VGLSVDY+AHVAH F LK GTR+ER+ +A+ DIG AV++GG+STFLAVVLL  S SYVF   FK FFAT V+GLGHG++LLPVLLSLVGP  Y+S++++
Sbjct:   79 YFGEKGPDLQIVTLEMDYFREQPFLADIRSRLQGL-EDRSPYIRD--THGPSYDSWYDSYVAWLGMLPDGHVALHPVTKRP----LDEGQFYQWLGVFLDGP-GYVYNSKVKVGEDRESIVASRITAQYRSFATYTDGRLQEDAKKEVQAMDDTRKVVDSWGKPAFPWCYSYFAWETFKIIQQELTQGLTLCLVAVFLLALLLLAHPLAAFLVVLCVCGTVVDILGVMYFWDLPIDNVTVLMVVLSVGLSVDYSAHVAHCFMLKAGTRNERVSKALGDIGTAVLNGGLSTFLAVVLLGRSKSYVFITTFKLFFATVVLGLGHGMVLLPVLLSLVGPNPYASASAS 415          
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A7S1XPY4_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPY4_9STRA)

HSP 1 Score: 296 bits (757), Expect = 1.920e-88
Identity = 170/344 (49.42%), Postives = 227/344 (65.99%), Query Frame = 2
Query:    2 YFFGVGADVEIITEDIDYFAFQGDLAGVSAKLSGFGADASPYIQDPATTGTFF-SWYDDLVVYAEAEGTATLVPSTDGEHTIFADEPEFQSTLEAFLVSPDGLRYSTSVVMQEDGTINAAAMQAEY--------SGDINGEANKQVDAMVDFRKLVDGLE-FEAFPWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDERMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPASYSSSAST 1003
            YF G G  VE++T D+DY+A QG L  +  ++SG      PYI+DP+  G+ + SW ++ V Y E      L    DG + + A E +F + L  +L +  G +Y++SV  Q    I A+ +  EY         G    +  KQV AM   R LV   +  E F WS +YL WETF+IIY+EL QG GL L AV I+TL+LIAHP+++GLVFL V  TIVD+LG+M++W L +D+V+VI LVLAVGLSVDY+AHV H+F  K GT ++R++ A+SDIG AV++G +STFLAVVLLS S SYVFRVLFKQFF T V+G+GHG+I LPV+L  +GP  YS+  ST
Sbjct:  565 YFAGRGTPVEVVTTDMDYYASQGVLLSLKERMSGR-ETRKPYIKDPSDEGSGYESWLEEFVAYLEVANPGALTTDADG-YRVVATEADFYAELRTYL-NAAGSQYNSSVAWQGSEEIAASRIGFEYVSFLEDDPRGGKRDDTAKQVRAMDGMRDLVASWDDVEGFAWSYSYLNWETFKIIYRELIQGTGLALLAVAIITLVLIAHPVASGLVFLCVAMTIVDILGVMFYWDLVVDSVSVIMLVLAVGLSVDYSAHVGHAFMTKQGTNEQRVIAALSDIGAAVLNGAISTFLAVVLLSQSDSYVFRVLFKQFFVTCVLGVGHGMIFLPVMLYFLGPKPYSNEGST 905          
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A7S2SME8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SME8_9STRA)

HSP 1 Score: 275 bits (703), Expect = 3.500e-82
Identity = 162/337 (48.07%), Postives = 215/337 (63.80%), Query Frame = 2
Query:    2 YFFGVGADVEIITEDIDYFAFQGDLAGVSAKLSGFGADASPYIQDPATTGTFFSWYDDLVVYAEAEGTATLVPSTDGEHTIFADEPEFQSTLEAFLVSPDGLRYSTSVVMQEDGTINAAAMQAEYS-------GDINGEANKQVDAMVDFRKLVDGLEFEAFPWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDERMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPASYSS 991
            YF   G DV I+T+D DYFA Q  +  +  ++    AD   Y+QDP TT TF SWY+    Y  +  T T     + E T ++D       L  FL S DG  Y+ SVV      I A+ ++ ++        G    +A+K V AM   R+   G+   AFPW+  +L WET++II +EL   + LCLAAV ++T +LI HP  +GLVF+ V  T+VD+LG MYFWGL ID V+VI  V+A+GL VDY+AHV HSF +K GTR ER+   +SD+G AV++GG+STF AV+LLS SASYVFRVLF+QFF T V+GLGHG+ILLPVLLS +GP +Y+S
Sbjct:  379 YFGDEGTDVYIVTKDFDYFANQDTIRTIKDQV----ADVD-YLQDPYTTDTFDSWYEAFEGYCNS--TLTCGDYQNVEATFYSD-------LRTFLASSDGGMYNASVVFSGYDDIVASRIETQFKSYSKYTGGRRQEDADKVVRAMNKIRRKDWGVP--AFPWTYQFLAWETYKIIREELINNVSLCLAAVLVITTLLIGHPGCSGLVFICVAMTVVDILGCMYFWGLVIDNVSVIQTVIAIGLCVDYSAHVGHSFMMKAGTRSERVTACLSDVGAAVLNGGLSTFFAVILLSASASYVFRVLFQQFFLTVVLGLGHGMILLPVLLSFLGPPAYAS 699          
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A7S2G6F6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G6F6_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.040e-72
Identity = 150/342 (43.86%), Postives = 207/342 (60.53%), Query Frame = 2
Query:    2 YFFGVGADVEIITEDIDYFAFQGDLAGVSAKLSGFGADASPYIQDPATTGTFFSWYDDLVVYAEAEGTATLVPSTDGEHTIFADEPEFQSTLEAFLVSPDGLRYSTSVVM----QEDGTINAAAMQAE--------YSGDINGEANKQVDAMVDFRKLVDGLEFEAFPWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDERMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPASYSS 991
            YF   G  V ++T+DIDYFA Q +LA + + ++G       Y++DP  T ++ SWYD+   Y  +  +     +         DE  F +   +FL S  G+ Y   +       E G     A + +        YS   N E + +V   +D  + VD     AF WS  + +WET++II +EL   + LCL AVF++T +LI HP  +GLVF+ V  T++D+LG MYFWGL ID V+VI  V+A+GL VDYAAHV H F LK GT +ER++ A++D+G AV++GG+STFLAV LL+ SASYVF VLFKQFF T ++GL HGLILLPVLL+ VGP  Y+S
Sbjct:  527 YFGDEGEYVYVVTKDIDYFAEQSNLAAIKSDVAGV-----QYLRDPYDTDSYDSWYDEYETYCASNSSMADYAT---------DEDVFYACFRSFLESDAGIYYGADIAFVDGQDEPGVDYVVATRIKTQFKDMSVYSKGKNREDSGKVIKAMDAVRDVDW-SVSAFSWSYTFSKWETYKIIQEELVTNVILCLVAVFVITTLLIGHPGCSGLVFICVAMTVLDILGCMYFWGLFIDNVSVIQTVIAIGLCVDYAAHVGHCFMLKAGTNEERVIAALADVGAAVLNGGISTFLAVSLLAGSASYVFVVLFKQFFLTVILGLVHGLILLPVLLAYVGPPCYAS 853          
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A813INV5_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813INV5_POLGL)

HSP 1 Score: 242 bits (617), Expect = 1.660e-68
Identity = 158/351 (45.01%), Postives = 206/351 (58.69%), Query Frame = 2
Query:    2 YFFGVGADVEIITEDIDYFAFQGDLAGVSAKLSGFGADASPYIQDPATTGTFFSWYDDLVVYAEAEGTATLVPSTDGEHTIFADEPEFQSTLEAFLVSPDGLRYSTSVVMQEDGT----INAAAMQAE---YSGDING----EANKQVDAMVDFRKLV----DGLEFEAFPWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDERMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPASYSSSASTEK 1009
            YF   G  V I+T+  DYFA Q  L  + A+L         YIQD A    F SW D       A  T   V      H    ++ E+ + L+A+L    G  Y+  V   +D      + ++ M AE   Y  D+NG    +A+K ++ M   R  V    D    +AFP++  +L WE F+II +EL   +G+CLAAVF +TLIL+AHP +A LVF +V   IVDVLG M  WGLAID V+VI LV++VGLSVDYAAHVAH F  K GTR ER++  + D+G AV+ GG STFLAV LL  S SYVFRVLF+ FF T V+GL HGL+++P +LSLVGP  YS +   +K
Sbjct:  562 YFGDQGQSVYIVTQGGDYFATQSGLTSIRARLGSLW-----YIQDTAGD-KFDSWADSFQGAIRAGSTGATVSFNSMGHA--TNQVEYYAGLKAWLGGA-GKSYAKDVKWVDDSNPQKGVASSRMSAEFKSYKRDVNGKLIQDADKAIEIMDGLRDTVASWKDMPGTDAFPYTYQFLSWEVFRIIKKELLVNVGMCLAAVFFITLILLAHPWTAFLVFAIVVMVIVDVLGCMNMWGLAIDNVSVIQLVISVGLSVDYAAHVAHCFMTKAGTRQERVIDTLGDVGSAVMKGGASTFLAVCLLGASKSYVFRVLFQTFFLTVVLGLSHGLLVMPAILSLVGPEGYSGTERKDK 903          
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A813M0I9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813M0I9_POLGL)

HSP 1 Score: 239 bits (610), Expect = 1.750e-66
Identity = 156/357 (43.70%), Postives = 209/357 (58.54%), Query Frame = 2
Query:    2 YFFGVGADVEIITEDIDYFAFQGDLAGVSAKLSGFGADASPYIQDPATTGTFFSWYDDLVVYAEAEGTATLVPSTDGEHTIF------ADEPEFQSTLEAFLVSPDGLRYSTSVVMQEDGT----INAAAMQAE---YSGDING----EANKQVDAMVDFRKLVDGLE----FEAFPWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDERMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPASYSSSASTEK 1009
            YF   G  V I+T+  DYFA Q  L  + A+L         YIQD A    F SW D        +G     P+  G +  F       ++ E+ + L+A+L    G  Y+  V   +D      + ++ M AE   Y  D+NG    +A+K ++ M   R  V   +     +AFP++  +L WE F+II +EL   +G+CLAAVF +TLIL+AHP +A LVF +V   IVDVLG M  WGLAID V+VI LV++VGLSVDYAAHVAH F  K GTR ER++  + D+G AV+ GG STFLAV LL  S SYVFRVLF+ FF T ++GL HGL+++P +LSLVGP  YS +   +K
Sbjct: 3316 YFGDQGQSVYIVTQGGDYFATQSGLTSIRARLGSLW-----YIQDTAGD-KFDSWADSF------QGAIRAGPTVVGANVSFNSMGHATNQVEYYAGLKAWLGGA-GKSYAKDVKWVDDSNPQKGVASSRMSAEFKSYKRDVNGKLIQDADKAIEIMDGLRDTVSSWKDMPGADAFPYTFQFLSWEVFRIIKKELLVNVGMCLAAVFFITLILLAHPWTAFLVFAIVVMVIVDVLGCMNMWGLAIDNVSVIQLVISVGLSVDYAAHVAHCFMTKAGTRQERVIDTLGDVGSAVMKGGASTFLAVCLLGASKSYVFRVLFQTFFLTVILGLSHGLLVMPAILSLVGPEGYSGTERKDK 3659          
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A7R9U284_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U284_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.140e-60
Identity = 127/272 (46.69%), Postives = 168/272 (61.76%), Query Frame = 2
Query:    2 YFFGVGADVEIITEDIDYFAFQGDLAGVSAKLSGFGADASPYIQDPATTGTFF-SWYDDLVVYAEAEGTATLVP-STDGE-HTIFADEPEFQSTLEAFLVSPDGLRYSTSVVMQEDGTINAAAMQAEY--------SGDINGEANKQVDAMVDFRKLVDGLE-FEAFPWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDER 781
            YF   G  VE++T D+DYFA Q  L  +  +LSG   D  P+++DP   G+ + SW +D ++Y      A L   S DG  + + +DE  F S+L  FL  P G  Y++SV       I A+ +Q EY         G    + +KQ+DAM   R LV   +  E F WS AYL WET++IIY+EL QG GL L AVFI+TL+LIAHP+++GLVFL V  TI D+LG+M++W L +D VAVI LVLAVGLSVDY+AHV H+F  K GT +ER
Sbjct:   95 YFADRGTTVEVVTTDMDYFASQAVLQDLKLRLSGR-EDRKPFVKDPLQDGSGYESWIEDFILYMNDTNPAALSSASVDGTPYQVVSDEATFFSSLLEFLDGP-GFDYNSSVAFASPTEIIASRIQFEYVSFLEDDPRGGKRDDTDKQIDAMDGMRSLVGSWDDVEGFAWSYAYLLWETYKIIYRELIQGTGLALMAVFIITLVLIAHPITSGLVFLCVGMTIADILGVMFYWDLVVDNVAVIMLVLAVGLSVDYSAHVGHAFMTKQGTNEER 364          
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A5B7E873_PORTR (Niemann-Pick C1 protein n=3 Tax=Portunidae TaxID=6757 RepID=A0A5B7E873_PORTR)

HSP 1 Score: 204 bits (520), Expect = 6.180e-59
Identity = 128/289 (44.29%), Postives = 177/289 (61.25%), Query Frame = 2
Query:  161 SWYDDLVVYAEAEGTATLVPSTDGEHTIFADEPEFQSTLEAFLVSPDGLRYSTSVVMQE------DGTINAAAMQAEYSGDINGEANKQVDAMVDFRKLVDGLEFEAF--PWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDERMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPASYSSSAST 1003
            SWY     Y E +    +VP  D E T    E +F   L  FL SP G +Y       E      +      A   EY   +  +  +Q+ AM D + +V       +  P++ AY  WET +II +ELYQ +GL +  V ++TL+LIA+ +++ +V + V FT+VDV  +M++WGL IDTV+ I+LVLA+GL VDYAAHVAH+F  KTG+RD+R+ QAV  IG AV++GG STFLA + L+ S S+VF   FK FFA  + GL HGL+ LPVLLSLVGPA+Y ++ S+
Sbjct:   48 SWYLKYKKYWEKQDY--IVP--DPEET----EEDFLDQLGMFLYSPSGSQYRVKNFFFESPFSCTEPATQVLASSIEYKHQVMSDPREQIRAMDDVKSIVRNSNISGYVQPFARAYSGWETNKIIEKELYQNMGLAMLVVLLVTLVLIANVVASIMVLVCVIFTLVDVAALMHWWGLTIDTVSCIDLVLAIGLCVDYAAHVAHTFMTKTGSRDQRVRQAVQTIGPAVLNGGFSTFLAFIFLANSDSHVFITFFKIFFAVVLYGLFHGLVFLPVLLSLVGPAAYPNAGSS 328          
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Match: A0A7S1VER4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VER4_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.960e-58
Identity = 142/360 (39.44%), Postives = 223/360 (61.94%), Query Frame = 2
Query:    2 YFFGVGADVEIITE-DIDYFAFQGDLAGVSAKLSGFGADASPYIQDPATTGTFFSWYDDLVVYAEAEGTATLVPSTDGEHTIFADEPEFQSTLE--AFLVSPDGLRYSTSVVMQEDGT-INAAAMQAEY-------SGDINGEANKQVDAMVDFRKLVDGLEF--EAFPWSEAYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFTIVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGT-RDERMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGLGHGLILLPVLLSLVGPASYSSSASTEKGQVQAVVTPL 1039
            YF   G D+ I  E   D +A + +LA ++ +LSG   +A P+I +P +   + +    L  Y  A G+  +   T G+     +E +F  T+   A    P G +YS  + + EDGT + A  +++EY        GDI  +A++Q++AM   R +++       +FP+SE ++  E F+II QEL+Q +GL + AV I+  I +A P++A L+   V F I+++LG MY  G+ ID+V+VIN+VLAVGLSVDY+AHV H F +K G+ +++R+ +A++DIG AV+ G +STFLAVV+L  S+SYVF+VL +QF  T ++G+ HGL+LLPV+++L+GPA +SS+   E   V +    L
Sbjct:  569 YFPSKGIDLYITFEGSSDIYANRQELAELADRLSGKSEEA-PFIAEPVSEEAYQNVMTGLYQYLVASGSGAIGNVTLGDDNWPTNEADFVLTITNYASFFGP-GAQYSQDLALSEDGTALEAFKVKSEYVRLTKLSRGDIIDDADRQIEAMDATRDMIESWTDLQPSFPYSEKFITIEGFKIIQQELFQNVGLAILAVGIIVFITVASPVTALLITANVAFCIIEILGFMYALGIVIDSVSVINIVLAVGLSVDYSAHVGHCFMVKGGSDKNKRVTEALADIGAAVLSGAISTFLAVVVLLFSSSYVFKVLSRQFALTVLLGVLHGLVLLPVVMALLGPAPFSSAEDPEGEAVHSAAKKL 926          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1047.660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGH1_9PHAE8.940e-18477.81SSD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2Y3B3_9STRA5.350e-8951.01Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1XPY4_9STRA1.920e-8849.42Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SME8_9STRA3.500e-8248.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G6F6_9STRA4.040e-7243.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A813INV5_POLGL1.660e-6845.01Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A813M0I9_POLGL1.750e-6643.70Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7R9U284_9STRA1.140e-6046.69Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A5B7E873_PORTR6.180e-5944.29Niemann-Pick C1 protein n=3 Tax=Portunidae TaxID=6... [more]
A0A7S1VER4_9STRA1.960e-5839.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1047contigS-firma_F_contig1047:684..4932 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FVR4
Preferred namePTCHD3
PFAMsPatched
Max annot lvl2759|Eukaryota
KEGG koko:K12385
KEGG TC2.A.6.6
KEGG Pathwayko04142,ko04979,map04142,map04979
Evalue1.54e-127
EggNOG OGsKOG1933@1|root,KOG1933@2759|Eukaryota
Descriptioncellular response to sterol depletion
COG categoryS
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Exons9
Model size1185
Cds size762
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815581.3056653-UTR-S-firma_F_contig1047:683..8161622815581.3056653-UTR-S-firma_F_contig1047:683..816Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1047 684..816 +
1696949432.1731937-UTR-S-firma_F_contig1047:683..8161696949432.1731937-UTR-S-firma_F_contig1047:683..816Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1047 684..816 +
1622815581.3171937-UTR-S-firma_F_contig1047:1232..13211622815581.3171937-UTR-S-firma_F_contig1047:1232..1321Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1047 1233..1321 +
1696949432.186027-UTR-S-firma_F_contig1047:1232..13211696949432.186027-UTR-S-firma_F_contig1047:1232..1321Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1047 1233..1321 +
1622815581.326438-UTR-S-firma_F_contig1047:1660..17661622815581.326438-UTR-S-firma_F_contig1047:1660..1766Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1047 1661..1766 +
1696949432.1967506-UTR-S-firma_F_contig1047:1660..17661696949432.1967506-UTR-S-firma_F_contig1047:1660..1766Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1047 1661..1766 +
1622815581.4201317-UTR-S-firma_F_contig1047:4837..49321622815581.4201317-UTR-S-firma_F_contig1047:4837..4932Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1047 4838..4932 +
1696949432.28468-UTR-S-firma_F_contig1047:4837..49321696949432.28468-UTR-S-firma_F_contig1047:4837..4932Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1047 4838..4932 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815581.3356874-CDS-S-firma_F_contig1047:1766..18471622815581.3356874-CDS-S-firma_F_contig1047:1766..1847Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 1767..1847 +
1696949432.2144482-CDS-S-firma_F_contig1047:1766..18471696949432.2144482-CDS-S-firma_F_contig1047:1766..1847Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 1767..1847 +
1622815581.3451226-CDS-S-firma_F_contig1047:2287..23581622815581.3451226-CDS-S-firma_F_contig1047:2287..2358Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 2288..2358 +
1696949432.2239358-CDS-S-firma_F_contig1047:2287..23581696949432.2239358-CDS-S-firma_F_contig1047:2287..2358Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 2288..2358 +
1622815581.3575585-CDS-S-firma_F_contig1047:2602..27731622815581.3575585-CDS-S-firma_F_contig1047:2602..2773Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 2603..2773 +
1696949432.2318254-CDS-S-firma_F_contig1047:2602..27731696949432.2318254-CDS-S-firma_F_contig1047:2602..2773Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 2603..2773 +
1622815581.3670728-CDS-S-firma_F_contig1047:3076..32151622815581.3670728-CDS-S-firma_F_contig1047:3076..3215Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 3077..3215 +
1696949432.2395647-CDS-S-firma_F_contig1047:3076..32151696949432.2395647-CDS-S-firma_F_contig1047:3076..3215Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 3077..3215 +
1622815581.377087-CDS-S-firma_F_contig1047:3498..35941622815581.377087-CDS-S-firma_F_contig1047:3498..3594Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 3499..3594 +
1696949432.2478979-CDS-S-firma_F_contig1047:3498..35941696949432.2478979-CDS-S-firma_F_contig1047:3498..3594Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 3499..3594 +
1622815581.3900046-CDS-S-firma_F_contig1047:3939..40401622815581.3900046-CDS-S-firma_F_contig1047:3939..4040Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 3940..4040 +
1696949432.2567093-CDS-S-firma_F_contig1047:3939..40401696949432.2567093-CDS-S-firma_F_contig1047:3939..4040Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 3940..4040 +
1622815581.4024403-CDS-S-firma_F_contig1047:4734..48371622815581.4024403-CDS-S-firma_F_contig1047:4734..4837Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 4735..4837 +
1696949432.265656-CDS-S-firma_F_contig1047:4734..48371696949432.265656-CDS-S-firma_F_contig1047:4734..4837Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1047 4735..4837 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1047.660.1prot_S-firma_F_contig1047.660.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1047 1767..4837 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1047.660.1

>prot_S-firma_F_contig1047.660.1 ID=prot_S-firma_F_contig1047.660.1|Name=mRNA_S-firma_F_contig1047.660.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=254bp
MQEDGTINAAAMQAEYSGDINGEANKQVDAMVDFRKLVDGLEFEAFPWSE
AYLQWETFQIIYQELYQGLGLCLAAVFILTLILIAHPLSAGLVFLMVTFT
IVDVLGIMYFWGLAIDTVAVINLVLAVGLSVDYAAHVAHSFQLKTGTRDE
RMVQAVSDIGVAVIHGGVSTFLAVVLLSLSASYVFRVLFKQFFATAVMGL
GHGLILLPVLLSLVGPASYSSSASTEKGQVQAVVTPLGNTASNSKVSPSE
GRS*
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mRNA from alignment at S-firma_F_contig1047:684..4932+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1047.660.1 ID=mRNA_S-firma_F_contig1047.660.1|Name=mRNA_S-firma_F_contig1047.660.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4249bp|location=Sequence derived from alignment at S-firma_F_contig1047:684..4932+ (Sphaerotrichia firma ET2_F female)
GTACTTCTTCGGCGTCGGCGCAGACGTCGAGATCATCACGGAGGATATCG ACTACTTCGCCTTCCAGGGCGATTTGGCAGGTGTTTCGGCAAAGCTGTCC GGCTTTGGAGCCGACGCCTCGCCCTACATTCAGGTACCATACTTGTACTT GTTTTGCTTGCTTGTGCGCTAAATAGTGGTATGGTAGTACGCGTTCCCCC ATCGGCTGGGTTCCAGTGTGCGTTGGGACCGTATGGAACGGAGCGAAGGG GGTATTTCCGGGAGATTGGTGATTGGTACCACATGCGGATACTCGGTGTG CGACATTCGATGTACAGCAGTGCCTAGAGCTCCGTGGAGATTGGTGATTG GTAGCACATGCAGATACTCGGTGTGCGACATTCGATGTACAGCAGTGCCT GGAGCTCCGTAGATTCGACAACATGACAGGGCCCTAGGACAAAAGGCACC GTGGTCTAAAGTGATTGAGCTTGCTGCTATTGCACCACTGCTGCGGGATG CTGATGCTGTTGCTGATAGCGATGTTCATGCATTTGAAACACTATACAGG ACCCTGCGACAACTGGTACGTTCTTCAGCTGGTACGACGATCTCGTCGTC TACGCGGAAGCGGAGGGCACAGCCACCCTTGTCCCGAGGTATGTTGCAGA CCGTAAAATGAAAGGAAACGAGGGTGATATTCTTGCAAACAGCCATTTTC AACGACGCTGAGCAGCAGGGTCACGCGTTGCATTCGCTTGTGTAAACGTC TATGCGGACTACACTGCGATACTCCACCGCAGTTTTCACGGCTCTAAGGA GCCATTCTTGTCGTCGGAGCAGACTCAGTGTTGCAGCATAATTTTGGGAG GCACATCCTACCTCTACTTTGGACTGCTGCGTATACAAGTTGTGTTCTTC ACTTTAGTTTACCGTTCGTGTCTCAAGTGTACACTCTTTTTTTTTTTTTT CTTTCCCTCTCCGCTTTCTCAATAAAGTACTGACGGGGAGCACACGATCT TCGCCGATGAGCCGGAGTTCCAGTCCACCCTTGAGGCGTTCTTGGTCTCT CCGGACGGTCTGAGGTACAGCACCAGCGTGGTGATGCAAGAGGACGGGAC CATCAATGCGGCAGCAATGCAAGCCGAATACAGCGGTGACATCAACGGCG AAGCGAACAAACAGGTACTGTACAGGCATGCATCCCTTTTCCACCTCCCG TTCGACCCAACTATCATTCTATTTTATTTACTCCATTTGGACGCCAGCTC TCACCCTCTCTCTATCTCTCTGCTCTTCTCGACCGTAGCGCTTGGAGGTG GAGGATGGAACAAATCAAAAGCGCTGTAAATGGCGAAGTCGACCAACACG GCACACCTGTTATCAAAAGTAGCTTTTTTGTCGTGGTTTGATTGGGTACT CTTGCCAATAGTTCATGACGCGGCGGGTATTGGTCTCCACAAGCGTTGAG ATCAGCCCCCGTGCAAGTCACCCTCCCAGCAAGTAACTCTGTCCCGTTGC GTTGGACCACCTTGGACAGTTTCTGGCGCAACTGACGTTTCTGCACTGAC CACGTTTGCAATATCGCTTACTTATCACGGTGAATGTGACTCCCTTTTTT GCAGGTGGACGCGATGGTGGACTTTAGGAAGCTGGTTGACGGATTGGAAT TCGAAGCATTTCCGTGGAGCGAAGCGTGAGTCCACCAAGTCAGGTTGTCG TCATCGTCGTCGTCGTCAACGTTGTGGTGTCCCGTCGTCATTGGCCTTGT TAACATTGCTCGTCTAGATCACGTCGCTCGAGTCTTTCGTTCATTCTACC GAAAGATGCGAGTCTTGGAGGGCCCACGCAACTTTTAGTCGTTTAATCCC CGCGGCGGCTGTTCACCGTTGACCACGTTCGTTCCTGCCGCCGCCTCCCC CCATTTGCCACCACCACAGGTATCTGCAGTGGGAAACGTTCCAAATAATC TACCAGGAGCTGTACCAGGGCCTCGGCCTCTGCCTGGCGGCGGTGTTCAT CTTGACGCTTATCCTCATCGCCCACCCGCTCAGTGCTGGCCTGGTGTTCC TGATGGTAACGTTCACCATTGTCGACGTCTTGGGCATAATGTGAGTCAGG CTTGGCTGCGTCGCCAACGTTGCTTTCCCCTTGTCGCTTTTTTGTTTTTT TTTCTTTGAGATTGGTGACAGCAGGTATCTACGAACGTTCGTAAGGAGAT GAAAGTGGTCAATGTTCTTGTTGAGACAACTGCTGTGCAGTGCACCACAG GAACAACGCTCTGTTTGTGGAATTCGCTGCGCAGCTTCTTGGCCTACTTG AGATGAAAACACTATTTTGTTTGAGCACATGGGTTGTTTTGGACAGCTGC CTATTTACGTCGAATGCCCCCGTGCTTTCTTTGTATATTTCAGGTACTTC TGGGGCCTGGCAATCGACACGGTTGCTGTGATCAACTTGGTTTTGGCTGT TGGTCTATCAGTTGACTATGCAGCTCACGTCGCCCACTCCTTCCAGCTCA AGACCGGCACCAGGGACGAGCGGATGGTGCAGGTGTGGGGTGTTGTATGC GTGTTTTACTATAGCCTTTTTTGCGTAGCTGCTTTGTCTTTGCTTGGTTT GCGGTGCGGCGTGCTTTGCCTCTGGCTCGTTCTCCTGGCCTGCTGTGTGC GTGCATGCTCGTGTATGTGGCGTTGGGGTTGGGCGGCCTGATCCCACCGC GCGATTCGTGATAACGGCAGGCGCGCTTTCTTTCCCATGAGCTCTGACAC GAAGCTCTGTACGATACCCACGGCTCGTGCAATCGCCGCCTTCCTCTCTG TTTTTGGTTTCGCAGGCGGTGTCTGATATTGGTGTGGCCGTTATCCATGG CGGAGTGTCGACGTTTTTGGCGGTGGTGCTGCTGTCCCTGTCTGCTTCAT ACGTGTTCAGGGTGAGCGAGAAGAGGCTGCACTCACCGTGTGCCTTGTGG GGGTCCACCGTCGCTTTTTTGTAGCCACTGACCGCTATGCCGACGTCACG TCAACGTTGCGATGGCTGTCTTCCTTAGGTACAGAGCTAGCATGTGTAGG AAGGAGGTGTGAGCGAGGGCGCAACCACTAGTCTCGGCCGACATTGACGT CCCAACATCGGAAGTGTAGGCGTTGGACTGCTCAGGGCAGCTAACCCCCC AGCTACTTTGGACTGCTGTACCGACCGCCTGTCAACTAGGATATTTAGGT CGACGAGACCGCTGTTGAGCCTTGACGACCAACGACTGCTGTATCGCGCA CTGCAGGTTCTCTTTAAGCAGTTCTTTGCGACAGCTGTGATGGGCCTGGG GCACGGGCTAATCCTTCTGCCTGTCCTCCTGAGCCTCGTCGGCCCGGCTT CCTACAGGTTTGCAAGCCTATGTTGCGTGCCGTGTGTATTCGTTTATTCA TTGTTCAACATGCGGCAGTAATCTACATGTAGTCTACGCGCCGCAGCTGT GTTGCTCGGCTTCAACGACTTATACGTCTTTCGCTCGCCTCCCTGAGTTG ATGTGTGACTATTAATTTGTTTTGGCGTGTGTTTCGAGCACTTGCGTACA AAATCAGCGCATCGCAACACTTTCATGACGGCTATTGTAGGATTAACGAA GTTTTAATGACTCAGAAGTTGCCAAGTGCTTGCTTCTGTATCACTTGCAT CATCTCATGTAGTATTTCGATGTCCTGATGCGATGATATTGCTGTGGTTA TCGACATTCCCTCCTCTTTTTTGTTTTTGGGTTCAATGTTTTGAAGCGAC CAACCAGGTCGGTGTGCCGTGTGTGCTGTGTTGTAGAACTACCGAAGTTA CTCTACGTGCGCGAGAGGCGGTTGTCGTACTGGAAAATCGTGCTCACAGA TTTCGTAGTTCGGGTATTTTGGCCGCACTCGGAAACATCAAGGCTACTTG TAACCTGTGCTCTCATCTCCCGGCGCTGACGGGCACTAGGTTAAAGCACG CGAGGCGAGAAAGAAAAACACCCAGCTTGAAACTAAACCGCTTCCCCCCG TTTCTCGTTTTTTCCCGTGTCTTATCATGCATTCTGTTTTTGCGCCTCCA GTTCTTCCGCCAGCACCGAGAAGGGACAGGTCCAGGCTGTGGTAACGCCG CTGGGGAATACTGCCTCCAACTCCAAGGTTTCGCCTTCAGAAGGACGATC GTGATGCCATGTCAAAGCCTGACGTCATGATGCGTCACGGCCTTGTTTCA TTCCGGTTCACCTTTTGTGCTTTGCTTTTCCTGGTGGGTGAAGCTTCAA
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Coding sequence (CDS) from alignment at S-firma_F_contig1047:684..4932+

>mRNA_S-firma_F_contig1047.660.1 ID=mRNA_S-firma_F_contig1047.660.1|Name=mRNA_S-firma_F_contig1047.660.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1524bp|location=Sequence derived from alignment at S-firma_F_contig1047:684..4932+ (Sphaerotrichia firma ET2_F female)
ATGCAAGAGGACGGGACCATCAATGCGGCAGCAATGCAAGCCGAATACAG
CGGTGACATCAACGGCGAAGCGAACAAACAGATGCAAGAGGACGGGACCA
TCAATGCGGCAGCAATGCAAGCCGAATACAGCGGTGACATCAACGGCGAA
GCGAACAAACAGGTGGACGCGATGGTGGACTTTAGGAAGCTGGTTGACGG
ATTGGAATTCGAAGCATTTCCGTGGAGCGAAGCGTGGACGCGATGGTGGA
CTTTAGGAAGCTGGTTGACGGATTGGAATTCGAAGCATTTCCGTGGAGCG
AAGCGTATCTGCAGTGGGAAACGTTCCAAATAATCTACCAGGAGCTGTAC
CAGGGCCTCGGCCTCTGCCTGGCGGCGGTGTTCATCTTGACGCTTATCCT
CATCGCCCACCCGCTCAGTGCTGGCCTGGTGTTCCTGATGGTAACGTTCA
CCATTGTCGACGTCTTGGGCATAATGTATCTGCAGTGGGAAACGTTCCAA
ATAATCTACCAGGAGCTGTACCAGGGCCTCGGCCTCTGCCTGGCGGCGGT
GTTCATCTTGACGCTTATCCTCATCGCCCACCCGCTCAGTGCTGGCCTGG
TGTTCCTGATGGTAACGTTCACCATTGTCGACGTCTTGGGCATAATGTAC
TTCTGGGGCCTGGCAATCGACACGGTTGCTGTGATCAACTTGGTTTTGGC
TGTTGGTCTATCAGTTGACTATGCAGCTCACGTCGCCCACTCCTTCCAGC
TCAAGACCGGCACCAGGGACGAGCGGATGGTGCAGGTACTTCTGGGGCCT
GGCAATCGACACGGTTGCTGTGATCAACTTGGTTTTGGCTGTTGGTCTAT
CAGTTGACTATGCAGCTCACGTCGCCCACTCCTTCCAGCTCAAGACCGGC
ACCAGGGACGAGCGGATGGTGCAGGCGGTGTCTGATATTGGTGTGGCCGT
TATCCATGGCGGAGTGTCGACGTTTTTGGCGGTGGTGCTGCTGTCCCTGT
CTGCTTCATACGTGTTCAGGGCGGTGTCTGATATTGGTGTGGCCGTTATC
CATGGCGGAGTGTCGACGTTTTTGGCGGTGGTGCTGCTGTCCCTGTCTGC
TTCATACGTGTTCAGGGTTCTCTTTAAGCAGTTCTTTGCGACAGCTGTGA
TGGGCCTGGGGCACGGGCTAATCCTTCTGCCTGTCCTCCTGAGCCTCGTC
GGCCCGGCTTCCTACAGGTTCTCTTTAAGCAGTTCTTTGCGACAGCTGTG
ATGGGCCTGGGGCACGGGCTAATCCTTCTGCCTGTCCTCCTGAGCCTCGT
CGGCCCGGCTTCCTACAGTTCTTCCGCCAGCACCGAGAAGGGACAGGTCC
AGGCTGTGGTAACGCCGCTGGGGAATACTGCCTCCAACTCCAAGGTTTCG
CCTTCAGAAGGACGATCGTGATTCTTCCGCCAGCACCGAGAAGGGACAGG
TCCAGGCTGTGGTAACGCCGCTGGGGAATACTGCCTCCAACTCCAAGGTT
TCGCCTTCAGAAGGACGATCGTGA
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