mRNA_S-firma_F_contig10435.618.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: D8LIZ3_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ3_ECTSI) HSP 1 Score: 170 bits (430), Expect = 1.450e-45 Identity = 93/127 (73.23%), Postives = 103/127 (81.10%), Query Frame = 3
Query: 171 QAMGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWYEPLVGSAEDGEG 551
+AMGERVNQARSTIQYLKNTIEQVRRERALDGL+E+GS G +GD + +SR +V CKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRS MQA+FQAWYEPL S E+ +G
Sbjct: 655 KAMGERVNQARSTIQYLKNTIEQVRRERALDGLMEEGSVGGSKGDDEDRNSRPQVGLGEEEDEEETKCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSKMQADFQAWYEPLACSVEEEDG 781
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: A0A6H5KY72_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY72_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.030e-42 Identity = 89/127 (70.08%), Postives = 100/127 (78.74%), Query Frame = 3
Query: 171 QAMGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWYEPLVGSAEDGEG 551
+AMGERVNQARSTIQYLKNTIEQVRRERALDGL+E+GS G +GD + + R V CKAAIEVEKRVY+GSFQELRELKSEIEHIQRLL+K RS MQA+FQAWYEPL S E+ +G
Sbjct: 719 KAMGERVNQARSTIQYLKNTIEQVRRERALDGLMEEGSVGGSKGDDEDRNDRPEVGLGEEEDEEETKCKAAIEVEKRVYQGSFQELRELKSEIEHIQRLLQKCRSKMQADFQAWYEPLACSVEEKDG 845
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: A0A7S3YAX2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAX2_HETAK) HSP 1 Score: 87.0 bits (214), Expect = 4.000e-18 Identity = 49/132 (37.12%), Postives = 76/132 (57.58%), Query Frame = 3
Query: 147 LRLKTFTTQAMGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWYEPLVGSAED 542
++ K + +GE VN+AR+ I YLK+TIEQ+RRERA++G+++ ++ E KA ++ EK++YK SF L+ LK+EIEHIQRLL++G +QA+F WY G ++
Sbjct: 36 MKEKYVEAKKLGELVNKARNKINYLKSTIEQIRRERAIEGVMD---------------NKDGEEEPLPADPEEERMKAEVDEEKQIYKNSFAALKALKAEIEHIQRLLQRGSKKLQADFDTWYGVASGDLDE 152
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: F0Y7U3_AURAN (Kinesin-like protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7U3_AURAN) HSP 1 Score: 89.0 bits (219), Expect = 2.890e-17 Identity = 65/127 (51.18%), Postives = 83/127 (65.35%), Query Frame = 3
Query: 147 LRLKTFTTQAMGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWYEPLV 527
L+ K + GERVN +R +I YLK TIEQ+RRERA++G+ S XXXXXXXXXXX AIEVEKRVYK SF++LR LK EIEHIQR+LE GR+ +Q++F WY+ ++
Sbjct: 433 LKAKYGEAKMYGERVNSSRKSIAYLKQTIEQLRRERAMEGV----------------SGDXXXXXXXXXXXXXXXXXEAIEVEKRVYKESFEKLRGLKGEIEHIQRMLETGRARLQSDFDKWYDHVL 543
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: A0A7S3M7S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7S4_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 6.340e-15 Identity = 50/126 (39.68%), Postives = 68/126 (53.97%), Query Frame = 3
Query: 147 LRLKTFTTQAMGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWYEPL 524
L+ K + GER N++RS I YLK +IE +RRER L L + + GD + E + AI+ EK VYK SF LR LK EIEHI +++EK R++MQ++F WY L
Sbjct: 18 LKEKIAEAKTTGERANKSRSAINYLKQSIEDLRRERVLHRLNDSKADDASTGDQSQPEEESEAEATH---------RRAIDQEKIVYKTSFDRLRVLKPEIEHISKMIEKCRATMQSQFDQWYANL 134
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: A0A482RR62_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RR62_9ARCH) HSP 1 Score: 79.3 bits (194), Expect = 3.550e-14 Identity = 52/126 (41.27%), Postives = 72/126 (57.14%), Query Frame = 3
Query: 147 LRLKTFTTQAMGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWYEPL 524
L+ K + MGER Q+R+TI YLKN+IE +RR++AL L G+GD + E + AIE EK VY+ SF +LR LK EIEHI++LLEK R ++Q++F W+ L
Sbjct: 64 LKEKIAEAKLMGERAQQSRNTIAYLKNSIEAIRRDKALQRLNS------GDGDGAAEETEESSEEQTY--------RRAIEQEKAVYQESFDKLRVLKPEIEHIRKLLEKCRLNLQSQFDQWFATL 175
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: A0A835YZS4_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZS4_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 6.510e-14 Identity = 65/124 (52.42%), Postives = 77/124 (62.10%), Query Frame = 3
Query: 147 LRLKTFTTQAMGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWYE 518
L+ K T +++G RVNQARSTI YLKNTIEQ+RRERA++GL+ D EG XXXXXXXXXXX FQELRELK+EIE IQ+LLEK R MQ++F W E
Sbjct: 582 LQKKYTTAKSVGARVNQARSTITYLKNTIEQIRRERAMEGLM----------DREEGXXXXXXXXXXXXXXXXXXXXXXX----XXXXXGFQELRELKAEIERIQQLLEKARLKMQSDFDTWIE 691
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: A0A7S4EA65_9STRA (Kinesin-like protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EA65_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 6.610e-14 Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 3
Query: 147 LRLKTFTTQAMGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWY 515
L+ K +A GE+VN R I YLK +IE +RRERA++G++ + + +R+++ AI EK VYK +F+ LR LK+EIEH+Q++LE GR +Q E+ WY
Sbjct: 583 LKEKYCEAKACGEKVNATRKAIAYLKQSIEAIRRERAIEGVVNEDDLQ-----KADPEEQRKID--------------AIAQEKEVYKQNFESLRRLKTEIEHVQKMLESGRKKLQKEYDEWY 686
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: A0A7S0QPQ2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPQ2_9CRYP) HSP 1 Score: 74.7 bits (182), Expect = 7.410e-14 Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 3
Query: 147 LRLKTFTTQAMGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWY 515
L+ K +++GE VNQ R I LK +EQ+R ERA+ GL+E G+ DA ++ KA+I+ K +YK F LRELKSEIE IQ ++EK RS +Q +F+AWY
Sbjct: 28 LKSKYDEAKSVGEGVNQHRGEIARLKAHVEQLRAERAMQGLVE------GQDDAETEEEQQ--------------AKASIDQHKALYKDKFNRLRELKSEIEQIQAIMEKQRSQLQKDFEAWY 130
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Match: A0A662WU02_9STRA (Kinesin-like protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WU02_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 9.110e-12 Identity = 48/132 (36.36%), Postives = 70/132 (53.03%), Query Frame = 3
Query: 129 RSHAFSLRLKTFTTQAMGERVNQARSTIQYLKNTIEQVRRERAL--DGLLEDGSTAGGEGDAGEGSSRRRVEXXXXXXXXXXXCKAAIEVEKRVYKGSFQELRELKSEIEHIQRLLEKGRSSMQAEFQAWYE 518
R + +L+ K +A+ VN AR+ I+ L IE++R+++A+ +GLL+ G A AG GSS K I+ K YK F EL ELK EI+HIQ++LE GR +Q +F WY+
Sbjct: 603 RDNKIALKRKYDAAKALASDVNDARNQIKALTLQIEKLRKQQAIADEGLLDAGDDA-----AGAGSSSMTAAARAESEAAEQRLKGQIDTHKLAYKKGFNELSELKKEIQHIQKMLEMGRIKLQKDFDLWYQ 729 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10435.618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10435.618.1 >prot_S-firma_F_contig10435.618.1 ID=prot_S-firma_F_contig10435.618.1|Name=mRNA_S-firma_F_contig10435.618.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=128bp MGERVNQARSTIQYLKNTIEQVRRERALDGLLEDGSTAGGEGDAGEGSSRback to top mRNA from alignment at S-firma_F_contig10435:1875..3506+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10435.618.1 ID=mRNA_S-firma_F_contig10435.618.1|Name=mRNA_S-firma_F_contig10435.618.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1632bp|location=Sequence derived from alignment at S-firma_F_contig10435:1875..3506+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10435:1875..3506+ >mRNA_S-firma_F_contig10435.618.1 ID=mRNA_S-firma_F_contig10435.618.1|Name=mRNA_S-firma_F_contig10435.618.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=768bp|location=Sequence derived from alignment at S-firma_F_contig10435:1875..3506+ (Sphaerotrichia firma ET2_F female)back to top |