mRNA_S-firma_F_contig10405.589.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI) HSP 1 Score: 620 bits (1600), Expect = 4.330e-208 Identity = 349/764 (45.68%), Postives = 471/764 (61.65%), Query Frame = 1
Query: 1 DEEDDLVRLEEVHETLESLKNKRLFDGGPNNLRFSQKAVENMDYLPYESFGQMMLATYVRLCDPPRFDLAVLCDLLRRRDKNGNGINPDDVPLPGQVDHFKRDMRRLLPLLPMYSEEVEVKDGGEGATADGQAEGVVGKTGIVVTVPPNVVIQRQLNCPSFVEKLLANPAGHVLSDAERETNRVPHKQVLPIPTMTSDGTRKGAMYGEIAARSSLFGVESIMIGQGDEEAEAVVGDPVMV-----SVGGGTTRPCRLESLVWSEDPN----RGNSRLVAKVQEFVPPDHVQG-VRASQKPPSTNMPAVVWEVTNAAKTVELRRLTGRCEVIRPGEVEAHVSRQGS-WPVYQGEGFVKQLSSSEFRPIRSPDPKEKYLRWRPEGLERMFFDRRKEGVKWNQNANRRVVSTSAVVFSDAFDFRHQGGKPYSIDAALLNAFAATSRELRRQPGSWPLVSFGGPGVRWQDTLKFPAEILGALANGSKATMATSNGDGLEEVFFRLGVLSVFADSPARNALLSTKKSNHKTAMPCHACEVGQDQLSDGNFDVDKFRRTDDGTEHSLKIVARATTNAEKQALSMEHGVTDGESWNPLREHVIYLNLTRSIGIDLFHQSAQNSSRKLSKFFLRGLSPKTGQGVIACVLKDPNLRPPGAPPFRDILRGPGGFSSQTGMDVWRLMSVLGLAMRPVLASVQSMRRLYTRPYIAELKKRLD-----VKTDDEVLKNLRALLIASTTATHHVRAGSFNDDDLKTLQNTQRDQVRCI 2244
D+E + V L++ HE+L S+ +RL DGGP++LR+S +A+E +Y PYESF Q +LA + R+ P R L +L LR+ DK+GNGIN DVP DHF RDMR PL P+Y ++ K G GA G + G T + V++P V+IQR L+ P FVEKLLAN + H LS+++R RVP V+PIPT +DG R+GAMYG+IAA SS+FG++SIM+GQGD+E VVGD VMV V G PCRLESLVWS+D + GN R+VA+VQ + + + ++ + P T VWEVTN ++ +L GRCEV+ G + H GS P ++G GFVK+L S P+ SPDP K+L WRPEG ER+F+DRR+ G WN + RRV T A +F+DAFDFR+QGG Y I A LL+ FA+TS+ RRQPG+WPLV P VRWQD L F E++ L G +A +A + D +EE L+DGN+D+ + RRTDD TE++LK+++ ATT ++QALS +HGVT E NP R+HV +LN+ R+ GID+FHQ AQNS K+ K L GLS G +++C+ KDP+LR G PP RD + GGFS+ +GMDVWRL SV L RPVL SV SM+RL T P+ +++ L V TD EV++ LRALL+AS+ ATH +R+ SFND+ + ++ QR++V +
Sbjct: 27 DDEKEPVWLDKSHESLHSMGKRRLVDGGPDSLRYSLRALERGEYEPYESFTQALLAAFTRIASPSRSQLGLLFHCLRQTDKDGNGINAVDVP--DSADHFHRDMRARSPLFPVYGQDFREKGSG-GAATSGVEDASDGPTRLAVSIPAGVMIQRMLDSPGFVEKLLANTSRHTLSESDRVNGRVPDAHVMPIPTRRTDGVRQGAMYGDIAASSSIFGIDSIMVGQGDKEDRVVVGDTVMVVDLPGQVEGAGALPCRLESLVWSKDCDIAGGGGNDRIVARVQRCLLNNALSAEMKVEEDAPGTK--TGVWEVTNDGVDLDTSKLVGRCEVV--GSDDVHTGEDGSALPSFRGVGFVKRLRSGRHTPLPSPDPAVKHLPWRPEGAERLFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIA--DKVEE------------------------------------------DLADGNYDIVRNRRTDDQTEYALKVISTATTGTQRQALSSKHGVTPQEVENPFRKHV-HLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSD-GGFSALSGMDVWRLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSKATHLLRSSSFNDETVASIDRLQREKVSLM 737
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: A0A6H5KYQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ6_9PHAE) HSP 1 Score: 382 bits (981), Expect = 3.490e-115 Identity = 249/718 (34.68%), Postives = 371/718 (51.67%), Query Frame = 1
Query: 130 YLPYESFGQMMLATYVRLCDPPRFDLAVLCDLLRRRDKNGNGINPDDVPLPGQVDHFKRDMRRLLPLLPMYSEEVEVKDGGEGATADGQAEGVVGKTGIVVTVPPNVVIQRQLNCPSFVEKLLANPAGHVLSDAERETNRVPHKQVLPIPTMTSDGTRKGAMYGEIAARSSLFGVESIMIGQGDEEAEAVVGDPVMVSVGGGT---TRPCRLESLVWSEDPNRGNSRLVAKVQEFVPPDHVQGVRASQKPPSTNMPAVVWEVTNA--AKTVELRRLTGRCEVIRPGEVEAHVSRQGSWPVYQGEGFVKQLSSSEFRPIRSPDPKEKYLRWRPEGLERMFFDRRKEGVKWNQNANRRVVSTSAVVFSDAFDFRHQGGKPYSIDAALLNAFAATSRELRRQPGSWPLVSFGGPGVRWQDTLKFPAEILGALANGSKATMATSNGDGLEEVFFRLGVLSVFADSPARNALLSTKKSNHKTAMPCHACEVGQDQLSDGNFDVDKFRRTDDGTEHSLKIVARATTNAEKQALSMEHGVTDGESWNPLREHVIYLNLTRSIGIDLFHQSAQNSSRKLSKFFLRGLSPKTGQGVIACVLKDPNLRPPGAPPFRDILRGPGGFSSQTGMDVWRLMSVLGLAMRPVLASVQSMRRLYTRPYIAELKKRLDVKTDDE-----VLKNLRALLIASTTATHHVRAGSFNDDDLKTLQNTQRDQVRCINNM 2253
+ PY + +LA YVRL R +L LR D++G GI P DVP DHF RD R L PLLP+ E++ K G T VV P ++QR+L P +L N GH+L+ AERE + VP + + + T + G R+G ++G++AA S+L GVES+++G + + VGD V+V+ RP RL +VW ED SRLV++V F+ + + + PP VVWEV + + +++ R+ GRC+V+ P A S V+ GF+++ +++ + SP + K L WR EGL +FFD+R V +N+ A V S V+F+DAF+F +GG PYSI+A +T+R RR+ SW L S G P RW+ L +G + NG +A + DG V +S T PC+ C V QD+L DG +D+ R DG +HSL +V + T ++ +S GV NP+REH ++LN +SIG+D+ HQ NS + K + GLSP G+ +A ++KDP+LR G+ P +DI+ GG++SQT D+WRL V L R VLA S+++ ++ E+ RL + + D VLK+LR LL A + A+H +R SF D D++ L QR++V + N+
Sbjct: 5 WCPYPNLTFAILANYVRLASLTRAQQNLLFSCLRYTDEDGQGIKPADVP--ASADHFARDARLLTPLLPVTEREIDDKKG---------------FTTSVVGFSPAALLQRRLESPGAAAGILDNLEGHLLTSAEREASGVPDEHLTAVATKPAGGLRRGFLHGKVAAASALMGVESLLVGPSGRQEKIFVGDTVLVASADERPEEARPYRLAEVVWVEDL----SRLVSRVSPFLTSAEAR-ITGAGAPPD-----VVWEVVDGDGGEEIDISRIEGRCDVV-PHVQGAGAGSSSSGRVFSAAGFIRRCGKEKYKKVWSPSGQPKVLPWRFEGLYGLFFDKRAARVYFNK-AGLPVFSIPLVIFTDAFNFFQRGGSPYSINATHFT-IGSTTRAFRRRLESWDLCSLGAPRARWEQELDGVFGTIGKMQNGCRARVCI---DGEPVV-----------------------RSGSGTFKPCNVCNVTQDELGDGQYDIAGNARMMDGIDHSLSLVRKEATKTKQGIVSTREGVVGAFVRNPVREH-LHLNPVKSIGVDIMHQDPLNSFGRAMKAMVDGLSP-AGRTWLAALVKDPSLRISGSEPLKDIV-SEGGWASQTASDLWRLAEVSTLLFRGVLADTASLKKYMRAAFVEEVGDRLGLASGDHGTGSAVLKSLRDLLYALSEASHCLRLSSFGDKDIQRLLEVQREKVDIVYNV 663
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI) HSP 1 Score: 374 bits (959), Expect = 1.970e-114 Identity = 198/393 (50.38%), Postives = 264/393 (67.18%), Query Frame = 1
Query: 1114 GLERMFFDRRKEGVKWNQNANRRVVSTSAVVFSDAFDFRHQGGKPYSIDAALLNAFAATSRELRRQPGSWPLVSFGGPGVRWQDTLKFPAEILGALANGSKATMATSNGDGLEEVFFRLGVLSVFADSPARNALLSTKKSNHKTAMPCHACEVGQDQLSDGNFDVDKFRRTDDGTEHSLKIVARATTNAEKQALSMEHGVTDGESWNPLREHVIYLNLTRSIGIDLFHQSAQNSSRKLSKFFLRGLSPKTGQGVIACVLKDPNLRPPGAPPFRDILRGPGGFSSQTGMDVWRLMSVLGLAMRPVLASVQSMRRLYTRPYIAELKKRLD-----VKTDDEVLKNLRALLIASTTATHHVRAGSFNDDDLKTLQNTQRDQVRCINNMQSSIYLPG 2277
G F+DRR+ G WN + RRV T A +F+DAFDFR+QGG Y I A LL+ FA+TS+ RRQPG+WPLV P VRWQD L F E++ L G +A +A + D +EEVFFRLG+L ADSP R LL K+ +KT MPCH C +GQ+ L+DGN+D+ + RRTDD TE++LK+++ A T ++QALS +HGVT E NP R+HV +LN+ R+ GIDLFHQ AQNS RK+ K L GLS G +++C+ KDP+LR G PP RD + GGFS+ +GMDVW L SV L RPVL SV SM+RL T P+ +++ L V TD EV++ LRALL+AS+ ATH +R+ SFND+ + ++ +QR++ +QSSI+ PG
Sbjct: 68 GQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIA--DKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHV-HLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSD-GGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKT-----LQSSIF-PG 450
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: A0A6H5K6B6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B6_9PHAE) HSP 1 Score: 248 bits (634), Expect = 5.870e-72 Identity = 168/446 (37.67%), Postives = 221/446 (49.55%), Query Frame = 1
Query: 64 KRLFDGGPNNLRFSQKAVENMDYLPYESFGQMMLATYVRLCDPPRFDLAVLCDLLRRRDKNGNGINPDDVPLPGQVDHFKRDMRRLLPLLPMYSEEVEVKDGGEGATADGQAEGVVGKTGIVVTVPPNVVIQRQLNCPSFVEKLLANPAGHVLSDAERETNRVPHKQVLPIPTMTSDGTRKGAMYGEIAARSSLFGVESIMIGQGDEEAEAVVGDPVMV-----SVGGGTTRPCRLESLVWSED----PNRGNSRLVAKVQE-FVPPDHVQGVRASQKPPSTNMPAVVWEVTNAAKTVELRRLTGRCEVIRPGEVEAHVSRQGSWPVYQGEGFVKQLSSSEFRPIRSPDPKEKYLRWRPEGLERMFFDRRKEGVKWNQNANRRVVSTSAVVFSDAFDFRHQGG----KPYSIDAALLNAFAATSRELRRQPGSWPLVSFGGPGVRW 1359
+RL DGGP++LR+S +A+E DY PYESF Q LA ++R+ P R L +L + + DK+GNGINP DVP DHF RDMR + G GA G + G T + V++P V+IQR L+ P FVEKLLA +GH LS+ +R RVP QV+ IPT ++ R+GA+YG+ AA SS GV+SIM+GQGD+E VVG+ VMV G PCRLESLVW++D N R+VA+VQ + D + + PST A ++E R+ R+F+DRR+ G WN RRV TSA + +DAFDFR+Q YSI A LL+ FA+TS+ R QPG+W LV VRW
Sbjct: 4 RRLVDGGPDSLRYSLRALEGGDYEPYESFTQAFLAGFIRIASPSRSQLGLLFHCVLQTDKDGNGINPVDVP--DSADHFLRDMR---------------EKGNGGAATSGVEDASDGPTRLAVSIPAGVMIQRMLDSPGFVEKLLAVTSGHTLSETDRVNGRVPDAQVM-IPTRRTNWVRQGAVYGDFAACSSTCGVDSIMVGQGDKEDRVVVGNTVMVVDVPGQAEGADALPCRLESLVWNKDCYIAGGGSNDRIVARVQRCLLNSDLSAETKVEEDAPSTKTGV-------QAPSLETRKAA-----------------------------------------------------------RLFYDRRRTGNHWNNGKERRVFLTSAHLSTDAFDFRNQASVSRRASYSIKATLLSPFASTSQAFR-QPGAWLLVGLSALRVRW 364
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: A0A6H5K575_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K575_9PHAE) HSP 1 Score: 117 bits (293), Expect = 2.090e-23 Identity = 133/523 (25.43%), Postives = 215/523 (41.11%), Query Frame = 1
Query: 427 VVTVPPNVVIQRQLNCPSFVEKLLANPAGHVLSDAERETNRVPHKQVLPIPTMTSDGTRKGAMYGEIAARSSLFGVESIMIGQGDEEAEAVVGDPVMVSVGGGTTRPCRLESLVWSEDPNRGNSRLVAKVQEFVPPDHVQGVRASQKPPSTNMPAVVWEVTNAAKTVELRRLTGR--CEVIRPGEVEAHVS---------RQGSWPVYQGEGFV--KQLSSSEFRPIRSPDP-KEKYLRWRPEGL-ERMFFDRRKEGVKWNQNANRRVVSTSAVVFSDAFDFRHQGGKPYSIDAALLNAFAATSRELRRQPGSWPLVSFGGPGVRWQDTLKFPAEILGALANGSKATMATSNGDG------LEEVFFRLGVLSVFADSPARNALLSTKKSNHKTAMPCHACEVGQDQ-------LSDGNFDVDKFRRT----DDGTEHSLKIVARATTNAEKQALSM----EHGVTDGESWNPLREHVIYLNLTRSIGIDLFHQSAQNSSRKLSKFFLRGLSPKTGQGVIACV 1887
V +P N+++ R++ PSF+E H+ S +P P + T +M+G +A S FG + ++ G + V D VMV++ G T P RL L W D +G + V+ F + V+ V+ ++ VWE + V + T R CE+ EV + R W + GEGF+ +Q + RSP P E W EG + F RK+ ++N+ N S VF+DAF NA++ + + RR+ + L + PG + + A ++G L G +AT DG +F G LS +D P +L K N+ T +PC C+ QD+ L + +DV+ RRT DG L+ + A K++ + GV+ G PL + V ++N R + ++ H A + + FFL L+ + G+GVI+ +
Sbjct: 207 VYDIPCNLLVNRKIQSPSFIETCAEFGRNHLFS--------------VPEPAGNALST---SMHGRLARNSPFFGFDGLL-GARTGNRKVYVNDVVMVTMSDGNTVPVRL--LEWYWDMEQGT--FLVAVRRFRTRNEVRDVQGGERIEGL---VRVWEEEGTSSKVIVHSTTIRDLCEIYTREEVSRSMHLEDEWEGGVRWAVWDAFVGEGFIVKRQKRRRQGDSFRSPPPFVESSASWAREGTGDEPLFGIRKKDFRYNKK-NLVFASIPFCVFNDAF-----------------NAWSMSIKVQRRRSETL-LGTTASPGAWVEGEISLQASVMGELQRGCEATAIVRAADGRVLDVEASAIFLHGGPLSWVSDLPQIAKILYCKHPNNSTKLPCPYCKAEQDERLPTCGDLGNARYDVEANRRTWGEAQDGW-RELQALDLAPNGQTKRSAELGIVAPTGVSGGVLGRPLWDKV-FINPARHVPVESLHADALGAQALVQVFFLALLN-EAGRGVISSI 682
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE) HSP 1 Score: 113 bits (283), Expect = 3.510e-22 Identity = 118/399 (29.57%), Postives = 177/399 (44.36%), Query Frame = 1
Query: 1102 WRPEGL-ERMFFDRRKEGVKWNQNANRRVVSTSAVVFSDAFDFRHQGGKPYSIDAALLNAFAATSRELRRQPGSWPLVSFGGPGVRWQDTLKFPAEILGALANGSKATMATSNGDGL---EEVFFRLGVLSVFADSPARNALLSTKKSNHKTAMPCHACEV--GQDQ----LSDGNFDVDKFRRTDDGTEHSL-KIVARATTNAEKQALSMEHGVTDGESWN---PLREHVIYLNLTRSIGIDLFHQSAQNSSRKLSKFFLRGLSPKTGQGVIACVL--KDPNLRPPGAPPFRDILRGPGGFSSQTGMDVWRLMSVLGLAMRPVLASVQSMRRLYTRPYIAELKKRLDVK-------TDDEVLKNLRALLIASTTATHHVRAGSFNDDDLKTLQNTQRD 2229
W EG ++ F R +GV N + N S V DAF+ G K +SI + + + S+ ++R + + PG R + EILG L G + G EEVF R G+L + D P R+ L TK N+ + PC C V G D+ + + FD+DK RRT T ++ A A +++ S E G+ + PL H + + + ++ H A + F L LS K G+ +++ ++ K L PPG +DIL + S TG D W L S++ L R VL + SMRR +KKR D+K T + VL LR L+ + + +RA S+ND +L+ L N RD
Sbjct: 12 WHAEGTTDKPLFGVRHQGVHLN-DMNLAFYSAPVVFSCDAFNAWGLGNK-HSIGGSYFD-WGWRSQAVQRLKNQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSHGDDETGGDVGNPQFDIDKHRRTSGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLY-HAMRIVPGDHVPVERLHFDALGQCQLCQVFCLELLSKK-GRRLVSAIMAQKSSLLYPPGTDKLKDILTD---YPSLTGSDKWTLQSIMLLVFRVVLQDIPSMRR--------NMKKR-DMKAFKAEWGTYESVLDALRTLIQMVSLLSFALRAPSYNDKELRQLDNLARD 393
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI) HSP 1 Score: 110 bits (274), Expect = 1.830e-21 Identity = 82/290 (28.28%), Postives = 130/290 (44.83%), Query Frame = 1
Query: 1384 EILGALANGSKATMATSNGDGLEEVFFRLGVLSVFADSPARNALLSTKKSNHKTAMPCHACEVGQDQLSDGNFDVDKFRRTDDGTEHSLKIVARATTNAEKQALSMEHGVTDGESWNPLREHVIYLNLTRSIGIDLFHQSAQNSSRKLSKFFLRGLSPKTGQGVIACVLKDPNLRPPGAPPFRDILRGPGGFSSQTGMDVWRLMSVLGLAMRPVLASVQSMRRLYTRPYIAELKKRLDVKTDDE-----VLKNLRALLIASTTATHHVRAGSFNDDDLKTLQNTQRDQVR 2238
+I+ L NG KA + + + + RLG+L+ DSP + + K N KT C AC V + L + +D+ K RT DG L VA ++ LS GV NP E + + G+D+ HQSA NS +K+ F + L P G ++ + PP P DI GG+S+ TG +W + S + P+ +S ++ R + E+ R+ V V + L+ A + + VR+ SF + L+ LQ +Q +QV+
Sbjct: 2 KIIRRLQNGCKAEFSIGDKQTVTALV-RLGLLTANLDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDE--VAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDP-AGSEIVRARFAWCRMLPPNVSPMADITSA-GGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVK 286
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: D7FGT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT2_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 1.340e-14 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 361 KDGGEGATADGQAEGVVGKTGIVVTVPPNVVIQRQLNCPSFVEKLLANPAGHVLSDAERETNRVPHKQVLPIPTMTSDGTRKGAMYGE 624
++G GA G + G T + ++P V+IQ L+CP FVEKLLAN +GH LS+++R RVP +PIPT +DG R+GA Y +
Sbjct: 7 ENGSGGAATSGVEDASDGPTRLAASIPAGVMIQWMLDCPGFVEKLLANTSGHTLSESDRVNGRVPEAHAMPIPTRRTDGVRQGATYAK 94
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: A0A6H5J9K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K9_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 1.320e-8 Identity = 63/248 (25.40%), Postives = 98/248 (39.52%), Query Frame = 1
Query: 244 NGNGINPDDVPLPGQVDHFKRDMRRLLPLLPMYSEEV-EVKDGGEGATADGQAEGVVGKTGIVVTVPPNVVIQRQLNCPSFVEKLLANPAGHVLSDAERETNRVPHKQVLPIPTMTSDGTRKGAMYGEIAARSSLFGVESIMIGQGDEEAEAVVGDPVMVSVGGGTTRPCRLESLVWSEDPNRGNSRLVAKVQEFVPPDHVQGVRASQKPPSTNMPAVVWEVTNAAKTVELRRLTGR--CEVIRPGEV 978
N G + DD+ HF R PLL + V KD G D +P N+++ R++ PSF+E + N G VL E E N + + +PT + +M+G +A S FG + ++ G + V D VMV++ G T P L W + + L+ V+ F + V+ V ++ VWE + V L T + CE+ EV
Sbjct: 62 NRKGFDVDDIRHI-TAKHFYGRRRAHHPLLEVVETFVPSSKDNGTSVPVD--------------DIPCNLLVNRKIQSPSFIETCVQNSGGKVLRAEEAEPNGLSSNHLCSVPTEPAGNALSTSMHGRLARSSPFFGFDGLL-GARTSNRKVYVNDVVMVTMSDGNTVPVWLLEWYWDME----QATLLVAVRRFRIRNEVRDVEGGERIEGL---VRVWEEKGTSSKVILHSTTIQDLCEIYTREEV 286
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 2.600e-7 Identity = 59/243 (24.28%), Postives = 99/243 (40.74%), Query Frame = 1
Query: 1525 KKSNHKTAMPCHACEVGQDQLSDGNFDVDKFRRTDDGTEHSLKIVARATTNAEKQALSMEHGVTDGESWNPLREHVIYLNLTRSIGIDLFHQSAQNSSRKLSKFFLRGLSPKTGQGVIACVLKDPNLRPPGAPPFRDILRGPGGFSSQTGMDVWRLMSVLGLAMRPVLASVQSMRRLYTRPYIAELKKRLDVKTDDE-----VLKNLRALLIASTTATHHVRAGSFNDDDLKTLQNTQRDQVR 2238
K N KT C AC V + L + +D+ +++ LS GV NPL E + + G+D+ HQSA NS +K+ F + L P G ++ DI GG S+ TG +W + S++ + P+ +S ++ R + E+ R+ V+ V + L+ A + + VR+ SF + L LQ +Q++QV+
Sbjct: 9 KHHNAKTERACQACVVPRRDLGNPKYDI-----------------------KDREKLSRALGVVVPRYPNPLDE--VAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDP-AGSEIVP-----------------DITSA-GGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVK 207 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10405.589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10405.589.1 >prot_S-firma_F_contig10405.589.1 ID=prot_S-firma_F_contig10405.589.1|Name=mRNA_S-firma_F_contig10405.589.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=762bp DEEDDLVRLEEVHETLESLKNKRLFDGGPNNLRFSQKAVENMDYLPYESFback to top mRNA from alignment at S-firma_F_contig10405:554..3780- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10405.589.1 ID=mRNA_S-firma_F_contig10405.589.1|Name=mRNA_S-firma_F_contig10405.589.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3227bp|location=Sequence derived from alignment at S-firma_F_contig10405:554..3780- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10405:554..3780- >mRNA_S-firma_F_contig10405.589.1 ID=mRNA_S-firma_F_contig10405.589.1|Name=mRNA_S-firma_F_contig10405.589.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4572bp|location=Sequence derived from alignment at S-firma_F_contig10405:554..3780- (Sphaerotrichia firma ET2_F female)back to top |