mRNA_S-firma_F_contig104.572.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: A0A6H5JKX1_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX1_9PHAE) HSP 1 Score: 1107 bits (2862), Expect = 0.000e+0 Identity = 644/913 (70.54%), Postives = 688/913 (75.36%), Query Frame = 3
Query: 510 QLRLLPGTVVLQPGDPIEFWHAQGLVLGNYDSPVTGRQSLIVHTETGEQLTIDAGQIVGVWREDEMSGRLP--RTNQGNGG------------------AVAAWTQVREEARALLQSTPARGLDLGPFWRAASSKGKGLVATPAHAAEFLFGAGSPAKLGLRKRPPFQFRGPGISFRPSAVERAAAAQVLSGERSRFKRVVSERLG-------GVGDSSKTDKXXXXXXXXXXXXXXXXXXGLPPEGVDAGTAGEXXXXXXXXXXXXXXXXXXXXXXPVLISVGGFKAMDHSVAVTREVADFCRVVAGIKRAAAAAAAGVAAGYGGXXXXXGVEEEGVGSALARAGLFEPAFLLILHSLEAFAIGGDEQALNPEAKRVMMEIMGKTNPAAAKSILVDVGLWTARGQ-DEGGGEPLAERAVETGEKTSSNAXXXXXXXXXXXXAGEGDGVLPWSAEALQAAAALGKERARRSANYGKREPQGNVGAPAPFGSR--HDFRGAAFGVYCIDGAGTSFLDDAFSVDPDTREVFIHITDVQGLVPAGSTLDDVARLRAASEYLPQGPLFMMPPTALKAMSFSDAPSAVNEAVTVGIRLDPKTGGVMSSRVMLTALPPVISLTIDQADRLLEAAEQGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGRGRETQTVEVAASRQALVVARSLVDELLTVYTQEAYRLCKKAGVAMPSLVGQQDRVANGRSRYGTGPLRRYIDILAQRQMAAILRGSGYLNKKELIETASYLTWRQNKTRASRSEEAGRLSLEALAAHCRAQTKATGLKHAVVPARGIGQGRQVRLEGLGGAG-------VQVHAKRPPGR--RGVAIEKGEAVRVVIERVEPRLKQVVATEFFEGGAADGMGAGGVGSGSGR*SEIAR 3131
QLRLLPGTV+LQPGDPIEFWHAQGLVLGNY+SPV GRQSL+V TE GE LTIDAGQIVGVWREDEMSG LP R G G VA W +VRE+ RALLQ PARGLD+G FWRAASS+GKG V TPAHAAEFLFGA SPAKLGLRKRPPFQFR PG +FRPSAVERAAAAQVL+GERSRFKRVVS+RLG G G K G GV G G PVLISVGGFKA+D SVAVTREVADFCRVV +KRAAAA GVAAGYG EE G GSALARA LFEPAFLLILHSLEAFAIGGDEQ+L PEAKRVM++I GK N AAK ILVDVGLWT+R Q +EGGG+P E E G AGE GV+PWSAEAL+AA ALG ERARR NYGKR P VGAPAPFG HDFRGA+FGVYCIDGAGT FLDDAFSVDP+TREVFIHITDVQGLVP GSTLDDVAR+RAASEYLPQGPLFMMPP ALKAMSFSD VNEAVTVGIRLDPKTGGV SSRVMLT LPP + LT DQ DRLLEA E+GETG+GRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKG G ETQ +EVAASRQ SLVDELLTVYTQE YRLCK+AGVAMPSLVGQQDRVA GRSRYGTGPLRRYIDILAQRQ+AAILRGSGYLNKK+L+ETA+YLTWRQNKTRASR EEA RLSLEALAAHC AQT+ATGL+HAVVPARG G+GR+VRLEGLGG G V VHAKR PG RGVAI KG+AVRVVI++VEP+LKQVVATEF DGM GG G G GR +++ +
Sbjct: 15 QLRLLPGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSLLVRTEAGEPLTIDAGQIVGVWREDEMSGHLPLGRVTAGADGDDGGDXXSSAAXXXXXAAVVAGWAEVREKIRALLQGMPARGLDVGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSPGEAFRPSAVERAAAAQVLAGERSRFKRVVSKRLGPAGVSPDGRGGRRKQRARGAGKGGGAEGEVLVADVGDGAVGVRGG-GGRGGTVNAQCRDERKQEEEEDLSQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAAA---GVAAGYG---DAAAAEEGGAGSALARARLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVDITGKANSTAAKCILVDVGLWTSRRQPEEGGGKP-GEEVGEVGRDE----------------AGEEGGVIPWSAEALEAATALGGERARRRVNYGKRRPLEEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPMALKAMSFSD--KGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEATEKGETGDGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASRQ------SLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETANYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLGGVGRGXXXXGVCVHAKRAPGSGGRGVAIRKGQAVRVVIQKVEPQLKQVVATEFV-----DGM-EGGAGRGGGRGADVTQ 889
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: A0A835Z4W4_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W4_9STRA) HSP 1 Score: 314 bits (804), Expect = 1.270e-84 Identity = 274/785 (34.90%), Postives = 367/785 (46.75%), Query Frame = 3
Query: 744 GAVAAWTQVREEARALLQSTPARGLDLGPFWRAASSKGKGLVATPAHAAEFLFGAGSPAKLGLRKRPPFQF---RGPGIS------------FRPSAVERAAAAQVLSGERSRFKRVVSERLGGVGDSSKTDKXXXXXXXXXXXXXXXXXXGLPPEGVDAGTAGEXXXXXXXXXXXXXXXXXXXXXXPVL-ISVGGFKAMDHSVAVTREVADFCRVV------AGIKRAAAAAAAGVAAGYGGXXXXXGVEEEGVGSALAR------------------AGLFEPAFLLILHSLEAFAIGGDEQALNPEAKRVMMEIMGKTNPAAAKSILVDVGLWTARGQDEGGGEPLAERAVETGEKTSSNAXXXXXXXXXXXXAGEGDGVLPWSAEALQAAAALGKERARRSANYGK---REPQGNVGAPAPFGSRHDFRGAAFGVYCIDGAGTSFLDDAFSVDPDTREVFIHITDVQGLVPAGSTLDDVARLRAASEYLPQGPLFMMPPTALKAMSFS-DAPSAVNEAVTVGIRLDPKTGGVMSSRVMLTALPPVISLTIDQADRLLEAAEQGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGRGRETQTVEVAASRQALVVARSLVDELLTVYTQEAYRLCKKAGVAMPSLVGQQDRVANGRSRYGTGPLRRYIDILAQRQMAAILRGSGYLNKKELIETASYLTWRQNKTRASRSEEAGRLSLEALAAHCRAQTKATGLKHAVVPARGIGQGRQVRLEGLGGAGVQVHAKRPPGRR 2966
G AW +++EAR LL P R LDL W+ A KGKG+V + A +LFG G+ + G + FQ +G S + PSA ER AA VL+ + RFKRV PV+ + GGFK +D SV T + F +V A A+ A + AA + A L + + I+HSLE A+GG L P+AK + ++ + AAA ++LV +G WT R + G T XXXXXXXXXXXX +PWSAEAL+AAA + R RR A Y + P+ +GAP P G R D+RGAAF VYC+D +F DDA S DPD RE+ IH+ D Q LV G LD VA+ R ++YLP+GPLFMMPP AL+A++FS DAP NEA+TV + +DP TG V SR+MLT LPPV++LT A+ +LE T A A G + G ++ + T E A A ++VD L ++T+ A R+C AG AMP LVG + RV +GR+R+GT PLRRY+D+LAQRQ+ A+L L K+ + + + LT N A+R+ E +L EAL HC +ATGL +A VPARG G+G +V ++GLG V + A GRR
Sbjct: 7 GGPEAWPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGA-RRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRV--------------------------------------------------------------PCVLRHSDPVVSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAG---------TAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNG-RRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAP---NEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRDRAGAVRAVTYEDTA-------AHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLG---VSILAGGRGGRR 705
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: A0A4D9CV05_9STRA (RNB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV05_9STRA) HSP 1 Score: 219 bits (557), Expect = 2.100e-55 Identity = 178/544 (32.72%), Postives = 259/544 (47.61%), Query Frame = 3
Query: 1491 ILHSLEAFAIGGDEQALNPEAKRVMMEIMGKTNPAAAKSILVDVGLWTARGQDEGGGEPLAER-AVETGEKTSSNAXXXXXXXXXXXXAGEGDGVLPWSAEALQAAAALGKERARRSANYGKREPQGNVGAPAPFGSRHDFRGAAFGVYCIDGAGTSFLDDAFSVDPDTREVFIHITDVQGLVPAGSTLDDVARLRAASEYLPQGPLFMMPPTALKAMSFSDAPSAVNEAVTVGIRLDPKTGGVMSSRVMLTALPPVISLTIDQADRLLEAAEQGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGRGRETQTVEVAASRQALVVARSLVDELLTVYTQEAYRLCKKAGVAMPSLVGQQDRVANG--RSRYGTGPLRRYIDILAQRQMAAILRGSGYLNKKELIETASYLTWRQNKTRASRSEEAGRLSLEALAAHCRAQTKATGLKHAVVPARGIGQGRQVRLEGLGGAGVQVHAKRPPG-----------RRGVAIEKGEAVRVVIERVEPRLKQVVATEFFEGGAADGM 3080
+LH LE F++G + L+ +++V+ + P AK +L+ G WT R G G E A ET A PW + L+ A + RR A K + G P G RHD+R + G Y +D G+ F DDA DP+T EV IHI DVQ LV L+ +AR R + YLP GPL ++PP AL+A S SD VNE VT + L P G V+++R++L+ +PP+ + D+A+ LL A+ + R + Q L + R S +R K R R R E+ A A +VDE L +Y++ R K V +P G V+ G +R+GTGPLRRY D+LAQ+QM ++L+G L+K E+I + + W+ ++ RS G++ LE+ A +C A+ KA G +AVV A G G +V L AG++ + + P G RR +E G V + RV+P + + EF A GM
Sbjct: 332 LLHHLEVFSLGAGVEGLSSTSQQVLKALGEPATPEGAKRVLLRAGYWTER---RGAGPGREENVAAETAAAQRMAA--------------------PWPEDILELAKEALAKTERRRAALAKVQRPNRPGRRGPHG-RHDYRASGLGAYALDPPGSEFADDALGFDPETGEVLIHIADVQALVEGTPELEALARQRGEAIYLPDGPLHLLPPPALQAASLSDR--EVNECVTAAVTLGPD-GSVLNARLLLSLVPPITRIRYDEANELLSASSLEDLPTYRR----QAAQDLNVLLRASQARRALTKRSFSEGK-RVSRVRRNTEGELEAIGFQRTPAHLMVDEFLALYSEAGRRFLKAHAVTLPLAPGS---VSGGLDAARFGTGPLRRYTDVLAQQQMVSVLKGRPPLSKSEVIRRMTQVNWQSKASQKLRSASRGKVLLESFATYCAAKAKAAGQAYAVVRATATGTGTEVMLPD---AGLRSYVRLPGGWKKKGKDGAGSRRLFDLEAGMEFEVHVLRVDP-ARGSIELEFAREEDAVGM 836
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: A0A482SRG6_9ARCH (RNB domain-containing ribonuclease n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRG6_9ARCH) HSP 1 Score: 127 bits (318), Expect = 5.900e-26 Identity = 113/429 (26.34%), Postives = 194/429 (45.22%), Query Frame = 3
Query: 1476 PAFLLILHSLEAFAIGGDEQALNPEAKRVMMEIMGK-TNPAAAKSILVDVGLWTARGQDEGGGEPLAERAVETGEKTSSNAXXXXXXXXXXXXAGEGDGVLPWSAEALQAAAALGKERARRSA--------NYGKREPQGNVGAPAPFGSRHDFRGAAFGVYCIDGAGTSFLDDAFSVDPDTREVFIHITDVQGLVPAGSTLDDVARLRAASEYLPQGPLFMMPPTALKAMSFSDAPSAVNEAVTVGIRLDPKTGGVMSSRVMLTALPPVISLTIDQADRLLEAAEQGETGE--GRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGR-GRETQTVEVAASRQALVVARSLVDELLTVYTQEAYRLCKKAGVAMPSLVGQQDRVANGR-SRYGTGPLRRYIDILAQRQMAAILRGSGYLNKKE 2723
P+ L L +LE +++ P+A +++++ +G+ +P+ A+++LV++ G V++G +S + V W L+AA L +++A+R A YGKR QG + A A+ V CID +F DDA S+ P+T E+ +H+ DV G + A L A+ R +SEYLP G + M PP AL+A++FS NEA+T ++D +G V+ RV + + PV+S IDQA+ ++EA G + K+++ L +G R + + + R ++T +++ + A +++ L++Y Y C + P +D V + R+ PLR +I QRQ+ A L L+ KE
Sbjct: 360 PSILRHLRALELYSMQ-PSAVPPPQALKLILKRLGQDASPSGARALLVEM--------KHASGSYALRTGVDSGVMSSGDMQGESVRFH----------VASWQPSVLEAATKLSEDQAKRRAAIQADAGRKYGKRGYQGRIDLRAS--------SASHPVMCIDAKSATFFDDAISLCPETGELLVHVIDVTGALRAHPELQQTAKERISSEYLPNGAIHMFPPKALEALTFSS--KEPNEAITAAFKIDYASGSVLDYRVFPSIIGPVVSFDIDQANTIIEAKSSGSKNQVWPVATEAVKDLELLHDIGSRIVKNNPWLIANVKNRMLLDSRVSKKTGVMKIGFEESS--PAHHIINACLSLYANATYHFCSSNNLPTPVAFVNRDTVNSSVVRRFAAHPLRNWISQQQQRQLRAALGIDSALSSKE 757
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: A0A6U7IBS1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A6U7IBS1_9EUKA) HSP 1 Score: 125 bits (314), Expect = 1.720e-25 Identity = 221/906 (24.39%), Postives = 344/906 (37.97%), Query Frame = 3
Query: 513 LRLLPGTVVLQPGDPIEFWHAQGLVLGNYDSPVTGRQSLIVHTETGEQLTIDAGQIVGVWREDEMSGRLPRTNQGNGGAVAA--WTQVREEARALLQSTPARGLDLGPFW-RAASSKG-KGLVATPAHAAEFLFGAGSPAKLGLRKRPPFQFRGPGISFRPSA--VERAAAAQVLSGERSRFKRVVSERLGGVGDSSKTDKXXXXXXXXXXXXXXXXXXGLPPEGVDAGTAGEXXXXXXXXXXXXXXXXXXXXXXPVLISVGGFKAMDHSVAVTREVADFCRVVAGIKRAAAAAAAGVAAGYGGXXXXXGVEEEGVGSALARAGLFEPAFLLILHSLEAFAIGGDEQALNPEAKRVMMEIMGKTNPAAAKSILVDVGLWTARGQDEGGG---------EPLAERAVETGEKTSSNAXXXXXXXXXXXXAGEGDGVLPWSAEALQAAAALGKERARRSANYGKREPQGNVGAP---APFGSRH---DFRGAAFGVYCIDGAGTSFLDDAFSVDPDTREVFIHITDVQGLVPAGSTLDDVARLRAASEYLPQGPLFMMPPTALKAMSFSDAPSAVNEAVTVGIRLDPKTGGVMSSRVMLTALPPVISLTIDQADRLLEAAEQGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGV-KFRKGRGRETQTVEVAASRQALV-------------------VARSLVDELLTVYTQEAYRLCKKAGVA-MPSLVGQQDRVANGRSRYGTGPLRRYIDILAQRQMAAILRGSGYLNKKELIETASYLTWRQNKTRASRSEEAGRLSLEALAAHCRAQTKATG----------LKHAVVPARGIGQGR------------QVRLEGLGGAGVQVHAKRPPGRRGVAIEKGEAVRVVIERVEPRLKQV 3038
+ + P + +L PG +E WH LV+GN+ R+S++ + + G+ + V ++ P G+ G + W ++ + ALL P LDL P W R + KG K L A+ LF SP G P A +R AA Q+L+ ER+ FKR+ + + G D +GE GGF+ + S A + +A+ + A +R A A V + EGVG ++ PA L +L +E A+G + + E ++ N A+ +L+DVG W A D +P A+ GE ++ X A+ + R E +G V + GS H D R Y ID T F DDA S D T + +HI D+ +VP GS LDDVARLR + Y PL M+PP L+ S NE ++ I LD G V SR++ + +PPV +LT ++ DRLL T + V +E++A+ + RR A R +G+ G + RG T A S A V A ++VDE+L++++ A K+ + +P + + R T PLRRY D++AQRQ+ A+L GS + E+ A+ W + K +++ L AL +HC Q +G +K V P +G ++RL G + V RR +++G+ ++V + V+ R +V
Sbjct: 39 MAVAPASGLLTPGSAVEVWHEGRLVVGNF------RESMVRSKSCALIVELSCGRRIKV-DGGQLVDVWPPDGMGHSGPRSPNDWAVLQRQCAALLAELPPHMLDLRPLWKRMLAEKGAKKLRIDSERVAQELFS--SPHHSGAA---------------PEARLAQRLAAGQLLADERTLFKRLPVQ--------------------------------ITASGSDGDQSGEGSGGTCELRWTH----------------GGFRVLPRSTASS--LAEVALIQAMKERLAVMRAGPVQLEHAPAAERLVRTGEGVGR------VWPPATLPLLAEVELVALGLSKASKQIERVLGAFSLL-PANATGAQKLLLDVGQWVAGEADAEARLGYSSGQWIDPFPREALAEGESMATAVNRRRAELKLTPXXXXXXXXXXXXXXXXPASGSSWLSRLLLPP-----EVEGCVAGTDDESSLGSLHGRVDLRSRFPRAYAIDTDKTDFRDDAVSYDVITGTLSVHIADLTNVVPPGSLLDDVARLRLQTIYTGGMPLHMLPPPLLRYCCLSA--KLPNECLSAVISLD-AFGRVRHSRLVRSVVPPVRTLTYEEVDRLL-------TDTSIDSEVHRELRAIASITRRRACNRHRVRQGKAGAAQTGAARGPRYATSSPATSSPASVRWRHVAADHSWRPEIVPQTEAHTVVDEVLSIFSYAARGAAKRHNLLRLPQMENR---------RIATAPLRRYADLIAQRQLCAVLCGSPGMPASEV---AAIERWIRAKQSDMATQQPQPQMLRALESHCARQATVSGSDFAVLEGTVVKTGVAPEARTSRGNAPTKQPPSRVEVEIRLHAGGVSAVATARTASQARRATRLQQGDVLQVRLRSVDTRRGRV 836
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: A0A2V3J848_9FLOR (DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J848_9FLOR) HSP 1 Score: 119 bits (298), Expect = 1.460e-23 Identity = 145/505 (28.71%), Postives = 224/505 (44.36%), Query Frame = 3
Query: 1491 ILHSLEAFAIGGDEQALNPEAKRVMMEIMGKTNPAAAKSILVDVGLWTARG-QDEGGGEPLAERA----VETGEKTSSNAXXXXXXXXXXXXAGEGDGVLPWSAEAL---QAAAALGKERARRSANYGKREPQGNVGAPAPFGSRHDFRGAAFGVYCIDGAGTSFLDDAFSVDP--DTREV--FIHITDVQGLVPAGSTLDDVARLRAASEYLPQGPLFMMPPTALKAMSFSDAPSAVNEAVTVGIRLDPKTGGVMSSRVMLTALPPVISLTIDQADRLLEAAEQGETGEGRLARVAKEIQALEYVGRRS----AEASGRRERGREG----------------VKFRKGRGRETQTVEVAASRQALVVAR----------SLVDELLTVYTQEAYRLCKKAGVAMPSLVGQQDRVANGRSRYGTGPLRRYIDILAQRQMAAILRGSGYLNKKELIETASYLTWRQNKTRASRSEEAGRLSLEALAAHCRAQTKATGLKHAVVPAR 2879
ILH +E A GG N A + + + A +L+D+ W++ Q G P +++ +GE++SS G W+ L A + RARRSA P+ A S + GA VYCID + FLDD+FSV+ ++ V F+HITDV V +GS +D +AR R S YLP PL M+PP A+ A SFS S EA+T+ I LD + ++ + +PPVI + +Q D +++ G+ L+R +E+ L+ + + + A+ RR R RE V+ +K G + A+S + VAR ++VD +LT + K+ VA+P VA R GT PLRRY D++ QRQ+ +L ++ + E ++L R ++ + S+ E+L+ HC Q ATG +A+V R
Sbjct: 277 ILHEIEVAAAGGGVP--NGRAATALEALGYRRTDEGATHLLLDIEYWSSVPVQSNDGAYPDSKKQSTPDTVSGEESSSTEASR----------GSSFQTPSWAFPPLILHDAHKIRSRARARRSALQATENPRQKDSARRLLRSSN---GAVLRVYCIDDRNSRFLDDSFSVEQLEGSKRVRFFLHITDVDEYVKSGSAIDAIARERGQSLYLPLKPLHMLPPPAMDAASFST--SLPVEAITIMIDLDLDKNELHKWQLFPSVVPPVIRINYEQFDNIIK----GDAKAIGLSR--EELADLQLIAKMASRLPAKLDTRRLRRREHTPHSSLENPIHLEANRVEAKKVAGVRLVKRQSASSSKPAKVARVIDFQSTGAHAIVDNILTSCGALIRQFAKENRVALPEGRDASTYVA----RCGTAPLRRYGDLVVQRQIKCVLFRKQPDGRRRMNELRNWLARRHSEGQKMVSQHRKSALFESLSIHCAQQCAATGNAYAMVRGR 754
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: A0A7S0ZJC8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJC8_9RHOD) HSP 1 Score: 105 bits (262), Expect = 8.500e-21 Identity = 86/280 (30.71%), Postives = 132/280 (47.14%), Query Frame = 3
Query: 1929 VYCIDGAGTSFLDDAFSVDPDTRE-------VFIHITDVQGLVPAGSTLDDVARLRAASEYLPQGPLFMMPPTALKAMSFSDAPSAVNEAVTVGIRLDPKTGGVMSSRVMLTALPPVISLTIDQADRLLEAAEQGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGRGRETQTVEVAASRQALVVARSLVDELLTVYTQEAYRLCKKAGVAMPSLVGQQDRVANGRSRYGTGPLRRYIDILAQRQMAAILRGSGYLNKKELIETASYL 2747
V+CID A +F DDA S + E V +HI DV + S LD +A+ RA S YLP GPL M+PP ++A+SF+ +EAVTV + +DP++G V + LT LPP LT QA + + ++ L + + AL GR G+R + R + G +V + +DE+L + R K V +P G Q R GT P+R+Y+D+ QRQ+ +I++G ++E++ +L
Sbjct: 66 VFCIDDAVANFRDDAISCS-EIEEFGKRFLVVSVHIADVDESIEPDSDLDAIAKDRAQSIYLPAGPLHMLPPVLMEALSFNA--EYASEAVTVRMLIDPESGQVEHYSIKLTYLPPATILTFQQASQAAKRTKE-------LNLMLEAGDALSRYGR------GKRNKNRSDYMSVRATG-----AQVVVEKYEFSDIHKAMDEILNLAGNCIRRFAKSKKVFLPERRGSQFFAL----RCGTAPMRKYMDLAVQRQIKSIIKGQSVGTQEEMVALNKWL 320
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: A0A7S1TNE9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNE9_9RHOD) HSP 1 Score: 100 bits (249), Expect = 8.650e-18 Identity = 91/333 (27.33%), Postives = 153/333 (45.95%), Query Frame = 3
Query: 1935 CIDGAGTSFLDDAFSV-------DPDTRE--VFIHITDVQGLVPAGSTLDDVARLRAASEYLPQGPLFMMPPTALKAMSFSDAPSAVNEAVTVGIRLDPKTGGVMSSRVMLTALPPVISLTIDQADRLLEAA------------EQGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGRGRETQTVEVAASRQALVVARSLVDELLTVYTQEAYRLCKKAGVAMPSLVGQQDRVANGRSRYGTGPLRRYIDILAQRQMAAILRGSGYLNKKELIETASYLTWRQNKTRASRSEEAGRLSLEALAAHCRAQTKATGLKHAVV 2870
C+D G +F DDA S +R+ V +H+ DV +V GS LDD AR RA S YLP GPL M+PP ++A+SFS+ +A ++AV++ + + +G ++ ++ + +PPV+ T D A + A + G+ LA + + A+ S GRR+R R + +G V + A +DE+L R + V +P G + R GT PLR+Y+D++ QRQ+ AIL+ +++++ +L R +T+ L +L++H Q++ L A +
Sbjct: 338 CVDDVGANFRDDAVSCYELPSGDGHASRQIVVVVHVADVSAVVCEGSALDDAARNRAQSIYLPTGPLHMLPPVLMEAVSFSE--TAPSDAVSIAMTICTDSGELVRYKIARSLVPPVVCYTFDAAKEAISAMGSNNGHPKAVMRHRDSRGDAALALLVEAASAM------SRADGGRRKRDRSDFVSVRLKGDR-----VTVQQYAFSTIHEAMDEVLNSAGSCLRRYARHHKVYLPERRGSEFFAM----RCGTAPLRKYMDLVVQRQIKAILQYERPAKREDMVALNKWLESRLVETKKLVQAHREDALLASLSSHVSTQSRLADLGRAAL 653
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: A0A7S2DFQ6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFQ6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.540e-17 Identity = 124/410 (30.24%), Postives = 182/410 (44.39%), Query Frame = 3
Query: 1956 SFLDDAFSVDPDTREVFIHITD-VQGLVPAGSTLDDVARLRAASEYLPQG-PLFMMPPTALKAMSFSDAPSAVNEAVTVGIRLDPKTG-----------------GVMSSRVMLTALPPVISLTIDQADRLLE-----AAEQGETGE--GRLARVAKEIQ----ALEYVGRRSAEASGRRERGREGVKFRKGRGRETQTVEVAASRQALVVARSLVDELLTVYTQEAYRLCKKAGVAMPSLVGQQDRVANGRSRYGTGPLRRYIDILAQRQMAAILRGSG-----YLNKKELIETASYLTWRQ---NKTRASRSEEAGRLS-LEALAAHCRAQTKAT-------GLKHAVVPARGIGQGRQVRLEGLGGAGVQ--VHAKRPPGRRGVAIEKGEAVRVVIERVEPRLKQVV 3041
S DDA S D + + +HI+ + G +P S L+ +A+ +A + YLP L + P L A S S VN VT+ LD T V + + PV +LT QA+R+L AA E + GR R+ +++ L Y RR E R T+ ++SR A S+VD +L++Y++EAY LCK+ GV+ P + G G RY T PLRRY D+LAQRQ+ +++ S L+ + + E S R+ K RA +E R + + LAAHC AQT+A G +V A G ++V L+ GG Q V KR + ++ G +V V I V+ K+VV
Sbjct: 83 SLRDDAMSWDEASSTLSVHISAALPGALPMDSLLEVLAKQKAEAYYLPGSVTLQLFPNEVLNAGSLSSRD--VNHCVTMRAVLDRTTTPQSTXXXXXXXXXXQSFSVREVTFSESLIGPVKTLTFTQANRILSSKVSPAATSLEDDDVTGRAHRMVHDLERVVTTLRYDNRRGQEPLKR-----------------TKQAIASSSR-----AHSIVDTVLSMYSKEAYLLCKRKGVSTPRMPG-------GVVRYSTAPLRRYADLLAQRQLLSLVGASDTSDVEVLDAETVREAMSIAVRRRAQYTKFRAGEAESRSRAAAIHDLAAHCAAQTRAHEAAGATGGTVPVLVTAEATGNAQEVILKDFGGLRAQLVVTKKRKRQKAVQPLKVGSSVLVRIVSVDLTSKRVV 461
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Match: K0S3P0_THAOC (RNB domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3P0_THAOC) HSP 1 Score: 92.8 bits (229), Expect = 2.270e-15 Identity = 122/447 (27.29%), Postives = 180/447 (40.27%), Query Frame = 3
Query: 1491 ILHSLEAFAIG---------GDEQALNPEAKRVMMEIMGKTNPAAAKSILVDVGLWTARGQDEGGGEPLAERAVETGEKTSSNAXXXXXXXXXXXXAGEGDGVLPWSAEALQAAAALGK-ERARRSANYGKREPQGNVGAPAPFGSRHD-FRGAAFGVYCIDGAGTSFLDDAFSVDPDTR------------EVFIHITDVQGLVPAGSTL---DDVARLRAASEY-------LPQGPLFMMPPTALKAMSFSDAPSAVNEAVTVGIRLDPKTGGVMSSRVMLTALPPVISLTIDQADRLLEAAEQGETGEGRLARVAKEIQALEYVGRRSAEASGRRE-RGREGVKFRKGRGRETQTVEVAASRQALVVARSLVDELLTVYTQEAYRLCKKAGVAMPSLVGQQDRVANGRSRYGTGPLRRYIDILAQRQMAAIL--RGSGYLNKKE 2723
I+H LE A+G GD + L + + ++ + + A+S L++VG W+ +D G VE PWSA+ L+A+ +L K E RR+ + P D F ++ CID TSF DDA + + EV IHI DV + G L D+A LR A+E LP GPL ++PP ALKA+S + N VT+ +D + G ++ + + T + +LT A LL+ + L+ + + EA+ +RE R + GR+ + V S Q R LVD L +Y L ++A +P G + N R GT PLRRYID +AQRQ A+L G L K+E
Sbjct: 363 IIHRLECLAMGDAWRRSDNQGDRKDLEVDVRETLIGLGLPLSSEGARSALIEVGRWSNVSEDNLG------VVVE-----------------------------PWSADTLEASRSLVKAEEKRRTLLLNTCKSIKTKPRKKPLAQLEDRFDLSSLPCVCIDAKRTSFRDDAIGIRLRSSTGRKVSKAASKWEVLIHIADVSDIYLKGEGLLPSHDIALLRHAAEQRGMSRYDLPLGPLHLLPPVALKALSLKTDEDSCNRCVTLWAYIDERDGKLLEAGLERTLIASPTALTFADATSLLDCDTDKSNVKAVLSVAHRNLSRWSRRHANLNEAARKREDRLSQKELISNATGRDGRDDGVGGSFQRSRGHR-LVDSSLDLYAFALGTLMRRANQPIPRAPGSME---NRGGRLGTAPLRRYIDGMAQRQAIAVLCDYGGKPLTKEE 770 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig104.572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig104.572.1 >prot_S-firma_F_contig104.572.1 ID=prot_S-firma_F_contig104.572.1|Name=mRNA_S-firma_F_contig104.572.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1028bp MDPEAPTGSLLQRPPRVLASQKAPARAGRPRRTCTAVAALAAIVLANLSAback to top mRNA from alignment at S-firma_F_contig104:14723..22123- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig104.572.1 ID=mRNA_S-firma_F_contig104.572.1|Name=mRNA_S-firma_F_contig104.572.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=7401bp|location=Sequence derived from alignment at S-firma_F_contig104:14723..22123- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig104:14723..22123- >mRNA_S-firma_F_contig104.572.1 ID=mRNA_S-firma_F_contig104.572.1|Name=mRNA_S-firma_F_contig104.572.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=6168bp|location=Sequence derived from alignment at S-firma_F_contig104:14723..22123- (Sphaerotrichia firma ET2_F female)back to top |