mRNA_S-firma_F_contig10397.568.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10397.568.1
Unique NamemRNA_S-firma_F_contig10397.568.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: A0A7S1PHH7_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1PHH7_9EUKA)

HSP 1 Score: 205 bits (521), Expect = 2.130e-57
Identity = 108/283 (38.16%), Postives = 162/283 (57.24%), Query Frame = 1
Query:  127 FGMLRLDMATPSRQALRQSFIELRPEAHQVGLDDKLS-WFG---IGKAALEDRGGYEPVLKVFAKRGCPNTLRGRVWTRVLGVHLSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVLHLMTFLPTIPVVGKDTYGKTTGPFPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            +G+++L++   S + L+Q F +L P   QVGLDD+   WF    I  A     GGY PVL   A+RG P+T RG++W ++LGV  S      F  L+       +  DDM+  D +R  +D N+F F +V+  V+ A  RD  +    +  P +P+ G D  GK    +PP G++P+  + L  AP  Y++    + Y+ FR MY +Y+CRL  IS+ P +L+PLCK FE +L  + P L+ HL  +   PL +   WI  AF+G+L++ ++LLLWDRVIGF 
Sbjct:  299 WGLIKLELEPLSIKDLQQRFSDLDPMNRQVGLDDQSKEWFSNDAINTAKRLSSGGYIPVLSKVARRGIPSTQRGKIWKQLLGVTGSSKQKAYFDMLLHQWNSSLMLIDDMVINDVKRTSDDENYFVFEDVILTVMQAFSRDAYIAEAASLKP-VPLFGVDKLGKKRSCYPPNGVVPFEGLSLLVAPFTYIFSNPVDTYFAFRGMYIKYFCRLHVISSKPQSLIPLCKQFEYMLQNMHPHLYYHLLELNIHPLDIAVNWIFHAFAGYLQVDQLLLLWDRVIGFS 580          
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: A0A8J8NS45_HALGN (Rab-GAP TBC domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NS45_HALGN)

HSP 1 Score: 197 bits (502), Expect = 6.410e-57
Identity = 104/283 (36.75%), Postives = 160/283 (56.54%), Query Frame = 1
Query:  127 FGMLRLDMATPSRQALRQSFIELRPEAHQVGLDDKLSWFG----IGKAALEDRGGYEPVLKVFAKRGCPNTLRGRVWTRVLGVHLSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVLHLMTFLPTIPVVGKDTYGKTTGPFPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            +G ++L + T S   LR+ + E+     Q+G+D++ S+      IG+  L+    Y+P L  +AKRG P TLR R++ ++L   ++  +   +  L  +     LA DD+L AD    C D  +F F E++E  +   FRD +V+ L+   P  PVVG     +  G +PPAG+LP      YA P  Y+ ++  + YY FRA Y +Y+  L TIS+   +++ L KLFEDLL    P +  HLN +G  PL   FPWI +AF G+L+I ++ LLWDR++GF+
Sbjct:   50 WGQIKLQLQTRSLDELRKKYNEMNVTLRQIGVDEEKSFIDERILIGERLLQKD--YQPFLVQYAKRGVPPTLRNRIYRKILYADVTQKEVDYYAQLSESFNKWELALDDLLMADIIEFCNDDKYFIFQEMIEACVFQFFRDRQVMELLKSRPHAPVVGIAGADRIVGAYPPAGMLPCLKFSSYAGPFSYISEKKEDCYYIFRAFYCKYFSYLHTISSHNQSIISLSKLFEDLLQMFEPEVCYHLNQLGISPLKTAFPWIFYAFVGYLDIDQIYLLWDRILGFE 330          
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: A0A1R2CCT7_9CILI (Rab-GAP TBC domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CCT7_9CILI)

HSP 1 Score: 201 bits (511), Expect = 1.180e-56
Identity = 105/283 (37.10%), Postives = 166/283 (58.66%), Query Frame = 1
Query:  127 FGMLRLDMATPSRQALRQSFIELRPEAHQVGLDDKLSW----FGIGKAALEDRGGYEPVLKVFAKRGCPNTLRGRVWTRVLGVHLSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVLHLMTFLPTIPVVGKDTYGKTTGPFPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            +G++++   TPS   LR ++ EL     QVG+D+   +      +G+  L     Y P +  +AKRG P +LRGR ++R+L    +  D+  F+ L+  ++   L+ D +++ D+  VC D  FF F E+LE + M+  RDP V   +  LP +P+VG    GK  G  PP G++P+ +   Y AP+ +L ++  E YY FR  Y +Y C L ++++    ++ LC+LFEDLL      L  HLN +G PPL + FPWI ++F GF+E+++V LLWDR+IG+D
Sbjct:  213 WGIVKVHFRTPSIDLLRVAYEELDVAIKQVGVDEDKMFVDERLAMGEKILSKS--YIPYMVQYAKRGVPTSLRGRFYSRILECQFASKDSSYFEYLLEQVQKWELSIDRIVQEDSSDVCNDDKFFIFHELLEKIYMSFLRDPWVSENLRALPNLPIVGISE-GKPIGSVPPCGIIPFKHFAKYIAPITFLSEKPEECYYIFRNFYCKYLCFLHSLTSETRGIISLCRLFEDLLQAYDSDLMYHLNQLGIPPLKIAFPWIFYSFVGFIEVEQVYLLWDRMIGYD 492          
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: A0A078AXN6_STYLE (Tbc1 domain family member 19-like n=3 Tax=Oxytrichidae TaxID=57506 RepID=A0A078AXN6_STYLE)

HSP 1 Score: 198 bits (503), Expect = 2.560e-55
Identity = 103/283 (36.40%), Postives = 159/283 (56.18%), Query Frame = 1
Query:  127 FGMLRLDMATPSRQALRQSFIELRPEAHQVGLDDKLSWFG----IGKAALEDRGGYEPVLKVFAKRGCPNTLRGRVWTRVLGVHLSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVLHLMTFLPTIPVVGKDTYGKTTGPFPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            +G ++L + T S   LR+ + EL     Q+G+D++ S+      IG+  L     Y+P L  +AKRG P TLR R++ ++L   ++  +   +  L         A DD++ AD    C D  +F F +++E  ++  FRD +VL  +   P  PVVG     +  G +PP G+LP      Y  PL Y+  +  E YY FRA+Y +Y+C L TIS+   +++ LCKLFEDLL    P +  HLN +G  PL + FPWI +AF G+LE+ ++ L+WDR++GF+
Sbjct:  234 WGQIKLQLQTRSLDELRKKYNELNVTLRQIGVDEEKSFVDERILIGERLLSKD--YQPFLVQYAKRGVPPTLRNRIYRKILYADVTQKEVDYYNQLCEQANKWETALDDLIFADILEFCNDDKYFIFQDMIEACVVMFFRDRQVLENIKSKPHAPVVGIAGTDRIVGAYPPCGVLPCLKFSSYFGPLSYISDKKEECYYIFRALYCKYFCYLNTISSHNQSIISLCKLFEDLLQMFEPEVCYHLNQLGIQPLKIAFPWIFYAFVGYLEVDQIYLVWDRILGFE 514          
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: A0A6G0XQS5_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQS5_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.490e-54
Identity = 107/281 (38.08%), Postives = 155/281 (55.16%), Query Frame = 1
Query:  148 MATPSRQALRQSFIELRPEAHQVGLDDKLS------WFGIGKAALEDR---GGYEPVLKVFAKRGCPNTLRGRVWTRVLGVHLSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVLHLMTFLPTIPVVGKDTYGKTTGPFPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            + T   Q +++ + EL P   Q GLD+ +        +  GK  L D+    G  P  + +AK GCP  +R  +W + L V    +DA  F+ L  +++  TLATD +   D Q+  +  ++FPF + L  V++A  RD +V  L       P+V            PPA ++PY  + ++ +PLCYLY     VY+ FR MY RYWC+L +IS   +++L LCK FE L+ R  P +  HL   G  PL + FPWI+ AFSGFLEI +VLLLWDRV+G+D
Sbjct:  194 LRTREPQEMQRRYTELSPAHAQYGLDEDVPNIHGDYVYIAGKNKLGDKVVHNGTVPTARQYAKTGCPINIRPHIWRQALSV---TIDALYFEQLQTSVQNSTLATDGLFLLDVQQTTDSSDYFPFEDHLRSVMLAFSRDSQVASLAMLTIQTPLVENGVV------IPPANVVPYSGLVMFVSPLCYLYDDPVHVYFVFREMYCRYWCQLTSISARSNSILALCKTFETLIHRHTPHVVHHLLEHGIEPLKIAFPWIQSAFSGFLEIDQVLLLWDRVVGYD 465          
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: W4FZ35_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZ35_9STRA)

HSP 1 Score: 194 bits (492), Expect = 6.460e-54
Identity = 118/331 (35.65%), Postives = 172/331 (51.96%), Query Frame = 1
Query:    1 MGSEVLYTEEDLIDALAAITAPVAPAPSVFPAVPGLDTPSCRFGMLRLDMATPSRQALRQSFIELRPEAHQVGLDDKLS-------WFGIGKAALEDR---GGYEPVLKVFAKRGCPNTLRGRVWTRVLGVHLSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVLHLMTFLPTIPVVGKDTYGKTTGPFPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            + S+ L++ E  + AL  IT P+  +P V         PS  +  +   + T     ++Q + EL P   Q G+D+ +        + G GK  L D+    G  P  + +AK G P TLR  +W + L V + P+    FK L   +K  T+ TD +   D Q+  +  ++FPF + L  V++A  RD +V          PVV +     +    PPA ++P+  + ++ APLCYLY     VY+ FR MY RYWC+L  IS  P+ +L LCK FE L+ R  P +  HL      PL + FPWI+ AFSG LEI +VLLLWDRV+G+D
Sbjct:  170 VASQFLFSSEAFLAALQRIT-PLNRSPHV---------PSHPWSSIHPLLRTRDTFEMQQRYTELSPAHAQYGVDEDVPNIHGDYVYIG-GKNKLGDKVLSNGTVPTARQYAKTGSPITLRPHIWRQALSVAIDPI---YFKQLEAKVKASTVVTDGLFMLDVQQTTDSSDYFPFEDHLRSVMLAFSRDEQVASQAVMTLQHPVVFQSNASCSKMAIPPANVMPFHGLVMFVAPLCYLYDDPVHVYFVFRDMYCRYWCQLTGISARPNAILALCKTFETLIHRHIPAVVQHLLQHDIVPLVIAFPWIQSAFSGVLEIDQVLLLWDRVVGYD 486          
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: D7FT85_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT85_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 7.330e-54
Identity = 113/295 (38.31%), Postives = 160/295 (54.24%), Query Frame = 1
Query:  142 LDMATPSRQALRQSFIELRPEAHQVGLDDKLSWFGIGKAALED--------RGGYEPVLKVFAKRGCPNTLRGRVWTRVLGVH--LSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVL-HLMTFLPTIPVVGKDTYGKTTGPF----------PPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            L +   S + LR+S+ EL PE HQ GLDD+   FG  +   E         + G+ P    +A+RG  ++LR  VW  +LG+   L+P D + F  L+  +    L TD++   D Q + +D  +FPF E L DV++A  RDP VL H    L  +  +G+   G     F          PP G+ P+  +  YAA LC+L++    VY+T R M+AR+WCRL  + + P  LL L KLFE L+ R  PRL   L  +G  PL L  PWI+F F  +LE  +VLLLWDR++G+D
Sbjct:  284 LQLRVKSLEELRESYRELSPELHQTGLDDR-GGFGEDRFTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKALTPQDLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSEATLHDLVPIGEGAVGADDWAFLSGAGAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFESLVQRHHPRLVRKLLQLGLQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYD 577          
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: A0A329T3N1_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T3N1_9STRA)

HSP 1 Score: 192 bits (488), Expect = 3.480e-53
Identity = 123/337 (36.50%), Postives = 175/337 (51.93%), Query Frame = 1
Query:    1 MGSEVLYTEEDLIDALAAITAPVAPAPSVFPAVPGLDTPSCRFGMLRLDMATPSRQALRQSFIELRPEAHQVGLDDKLSWFGIGKAALEDRGG-----YEPV--LKVFAKRGCPNTLRGRVWTRVLGVHLSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKV-LHLMTF--LPTIPVVGKD------TYGKTTGPFPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            + +  LY   DL+++L AI +      S        +T +  +G ++L + +P     R+ F EL PE  Q+GLD+          A ++R G     ++ V   + ++K GCP +LR ++W +VL V ++  D   F  L          TDDM   D Q+     ++F F + LE VLMA  RD  V  H +      T  + G        T   T    PP G+LP+  + +Y APL YLY    E+YY FR +Y RYW +L  I T   T+LP+CKLFEDL+ R +P    HL  +G  PL + FPWI+ AFSG L+I +VLLLWDRVIG+D
Sbjct:  181 LAARFLYDGHDLLNSLQAIESSNRAREST-------ETSTDSWGSIQLQLYSPPFPEYRRLFSELAPECGQIGLDELFPAQRSAFIAEKNRVGDLVLAHQSVSMARQYSKTGCPVSLRPQIWRQVLSVPVTAQDRSYFDHLQKQAAEWAYLTDDMYLLDLQQTINSCDYFVFQDHLESVLMAFTRDTYVKAHALQVNGAVTCSLSGAGLPPTAATTDMTESRVPPNGVLPFSGLVMYMAPLAYLYTDPIEIYYVFRELYTRYWSKLNAIRTERGTILPVCKLFEDLVVRSSPAAVFHLRNIGLKPLDIAFPWIQSAFSGVLDIDQVLLLWDRVIGYD 510          
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: A0A225WRI7_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WRI7_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.850e-53
Identity = 128/341 (37.54%), Postives = 173/341 (50.73%), Query Frame = 1
Query:    1 MGSEVLYTEEDLIDALAAITAPVAPAPSVFPAVPGLDTPSCRFGMLRLDMATPSRQALRQSFIELRPEAHQVGLDDKLSWFGIGKAALEDRGG-----YEPV--LKVFAKRGCPNTLRGRVWTRVLGVHLSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVL-HLMTF------------LPTIPVVGKDTYGKTTGPFPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            + +  LY   DL+ AL AI  P              D  +  +G ++L + +P      + F EL P   QVGLD+          A ++R G     ++ V   + ++K GC   LR ++W +VL V L+  D   F+ L       T  TDDM   D Q+  +  ++F F + LE VLMA  RD  V  H M              LP+   +G       T   PP G+LP+  I +Y APL YLY    E+YY FR +Y RYW +L  IST   T+LPLCKLFEDL+ R +P    HL  +G  PL + FPWI+ AFSG L+I +VLLLWDRVIG+D
Sbjct:  167 LATRFLYDGIDLLQALQAIEPPNR-----------ADEATDAWGSIQLQLYSPPFPEYCRLFSELAPGCGQVGLDELFPAQRSTFIAEKNRVGDLVLAHQSVSMARQYSKTGCTVGLRPQIWRQVLSVPLTAQDRSYFEHLKKQAAQWTYLTDDMYLLDLQQTIDSSDYFVFQDHLESVLMAFTRDTYVKGHAMQVNGVVNCSLPGEGLPSASGLGSGD-DTATSRVPPNGVLPFNGIVMYLAPLAYLYADPVEIYYVFRELYTRYWSKLNAISTERGTILPLCKLFEDLVVRSSPAAVFHLRNIGLKPLDIAFPWIQSAFSGVLDIDQVLLLWDRVIGYD 495          
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Match: F0YBG1_AURAN (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBG1_AURAN)

HSP 1 Score: 186 bits (473), Expect = 5.430e-53
Identity = 107/302 (35.43%), Postives = 165/302 (54.64%), Query Frame = 1
Query:  127 FGMLRLDMATPSRQALRQSFIELRPEAHQVGLD-------DKLS--WFGIGKAALEDRGGYEPVLKVFAKRGCPNTLRGRVWTRVLGVH-------LSPLDAQRFKSLVGNLKVCTLATDDMLRADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVLHLMTFLPTIPVVGKDTYGKTTGP-------FPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRLATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFAFSGFLEIKEVLLLWDRVIGFD 963
            +G+++L + T   + LR++F EL P   Q G         D+ S  W  +GK  L    G+ P+ + +A+RG P +LR +++  +LG+         S  +   +  L  ++    L TD++ + D Q V ++  +FPF E L +V++A  RDP VLH         +  K     T GP        PP  + P+     Y APL ++Y+R+  +YY  RAMYA++WC+L  + TA  TLLPLCKLFE L+    P+LF +L  +G  PL +  PWI+F F G L++ +VLLLWDR++GF+
Sbjct:    1 WGVVKLQLHTEPVRKLRETFRELHPSKRQRGRRKLGDAQADRFSDEWHALGKRCLAR--GHVPLARRYARRGVPPSLRPQIYRVLLGLPNVEHPQGCSEAEKAYYARLKAHVDKIELVTDELFQMDVQHVADNDYYFPFEEALGNVVLAFSRDPWVLHNSAVRTHARLAAKHKE-PTDGPAWKAGSAVPPCAVQPFRGFVSYTAPLTFVYEREEPIYYCLRAMYAKFWCKLNVMRTAECTLLPLCKLFEQLVIENHPKLFFYLVQIGVDPLAVALPWIQFGFVGLLDVDQVLLLWDRILGFE 299          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10397.568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1PHH7_9EUKA2.130e-5738.16Hypothetical protein n=1 Tax=Percolomonas cosmopol... [more]
A0A8J8NS45_HALGN6.410e-5736.75Rab-GAP TBC domain-containing protein n=1 Tax=Halt... [more]
A0A1R2CCT7_9CILI1.180e-5637.10Rab-GAP TBC domain-containing protein n=1 Tax=Sten... [more]
A0A078AXN6_STYLE2.560e-5536.40Tbc1 domain family member 19-like n=3 Tax=Oxytrich... [more]
A0A6G0XQS5_9STRA4.490e-5438.08Rab-GAP TBC domain-containing protein n=1 Tax=Apha... [more]
W4FZ35_9STRA6.460e-5435.65Rab-GAP TBC domain-containing protein n=2 Tax=Apha... [more]
D7FT85_ECTSI7.330e-5438.31Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A329T3N1_9STRA3.480e-5336.50Rab-GAP TBC domain-containing protein n=2 Tax=Phyt... [more]
A0A225WRI7_9STRA3.850e-5337.54Rab-GAP TBC domain-containing protein n=1 Tax=Phyt... [more]
F0YBG1_AURAN5.430e-5335.43Rab-GAP TBC domain-containing protein (Fragment) n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10397contigS-firma_F_contig10397:126..1149 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog227086.JGI_V11_29159
Preferred nameTBC1D19
PFAMsRabGAP-TBC
Max annot lvl2759|Eukaryota
GOsGO:0003674,GO:0005096,GO:0008047,GO:0008150,GO:0030234,GO:0030695,GO:0043085,GO:0043087,GO:0043547,GO:0044093,GO:0050790,GO:0051336,GO:0051345,GO:0060589,GO:0065007,GO:0065009,GO:0098772
Evalue1.35e-59
EggNOG OGs28K1A@1|root,2QSFR@2759|Eukaryota
DescriptionGTPase activator activity
COG categoryS
Hectar predicted targeting categoryother localisation
Exons2
Model size963
Cds size963
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815572.3115487-CDS-S-firma_F_contig10397:125..5921622815572.3115487-CDS-S-firma_F_contig10397:125..592Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10397 126..592 -
1696949425.4327095-CDS-S-firma_F_contig10397:125..5921696949425.4327095-CDS-S-firma_F_contig10397:125..592Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10397 126..592 -
1622815572.327549-CDS-S-firma_F_contig10397:653..11491622815572.327549-CDS-S-firma_F_contig10397:653..1149Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10397 654..1149 -
1696949425.4472558-CDS-S-firma_F_contig10397:653..11491696949425.4472558-CDS-S-firma_F_contig10397:653..1149Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10397 654..1149 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10397.568.1prot_S-firma_F_contig10397.568.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10397 126..1149 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10397.568.1

>prot_S-firma_F_contig10397.568.1 ID=prot_S-firma_F_contig10397.568.1|Name=mRNA_S-firma_F_contig10397.568.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=321bp
MGSEVLYTEEDLIDALAAITAPVAPAPSVFPAVPGLDTPSCRFGMLRLDM
ATPSRQALRQSFIELRPEAHQVGLDDKLSWFGIGKAALEDRGGYEPVLKV
FAKRGCPNTLRGRVWTRVLGVHLSPLDAQRFKSLVGNLKVCTLATDDMLR
ADAQRVCEDHNFFPFAEVLEDVLMALFRDPKVLHLMTFLPTIPVVGKDTY
GKTTGPFPPAGLLPYPNICLYAAPLCYLYQRDYEVYYTFRAMYARYWCRL
ATISTAPSTLLPLCKLFEDLLARLAPRLFIHLNAMGTPPLTLVFPWIRFA
FSGFLEIKEVLLLWDRVIGFD
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mRNA from alignment at S-firma_F_contig10397:126..1149-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10397.568.1 ID=mRNA_S-firma_F_contig10397.568.1|Name=mRNA_S-firma_F_contig10397.568.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1024bp|location=Sequence derived from alignment at S-firma_F_contig10397:126..1149- (Sphaerotrichia firma ET2_F female)
ATGGGGTCTGAGGTGCTGTACACGGAGGAGGACCTCATCGACGCCCTGGC TGCCATCACGGCGCCCGTCGCACCCGCTCCCTCCGTGTTCCCCGCCGTGC CAGGGCTTGACACCCCCTCCTGCCGCTTTGGCATGCTGCGGCTGGACATG GCGACGCCCTCCCGGCAGGCCCTCCGGCAGTCCTTCATTGAGCTGCGCCC AGAGGCACACCAGGTCGGCCTGGACGACAAACTGTCGTGGTTCGGGATTG GGAAGGCCGCCCTGGAGGACAGAGGCGGCTACGAGCCTGTGCTGAAGGTG TTTGCGAAGCGGGGGTGCCCCAACACCCTCCGGGGGCGGGTGTGGACGCG GGTCCTGGGCGTCCACCTCTCCCCACTGGACGCCCAGCGGTTTAAGTCCC TTGTGGGGAACCTGAAGGTGTGCACCCTGGCCACGGACGACATGCTGCGG GCTGACGCGCAGCGGGTGTGCGAGGACCACAACTTCTTCCCATTTGGTGG GTTTGCTGGGTTGTACACTCACTCACACAGACAACACTCACCCACTCACG ATTACAGCGGAGGTGCTGGAGGACGTGCTCATGGCACTGTTCCGGGACCC CAAAGTCCTACACCTCATGACGTTCTTGCCCACCATTCCAGTGGTTGGCA AGGACACGTACGGCAAAACGACGGGCCCCTTCCCCCCTGCCGGCCTCCTC CCGTACCCCAACATTTGCCTGTACGCCGCCCCCCTGTGCTACCTGTACCA GCGGGACTACGAGGTGTACTACACCTTCCGCGCCATGTACGCCCGGTACT GGTGCAGGCTGGCCACCATCAGCACCGCGCCCTCCACCCTCCTCCCGCTG TGCAAGCTGTTTGAGGACCTGCTGGCGCGGCTGGCGCCCCGGCTGTTCAT CCACCTCAACGCCATGGGGACCCCGCCCCTGACCCTCGTGTTTCCGTGGA TCAGGTTCGCGTTTTCCGGGTTCCTGGAGATCAAGGAAGTGCTGTTGCTG TGGGACCGTGTGATTGGGTTTGAC
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Coding sequence (CDS) from alignment at S-firma_F_contig10397:126..1149-

>mRNA_S-firma_F_contig10397.568.1 ID=mRNA_S-firma_F_contig10397.568.1|Name=mRNA_S-firma_F_contig10397.568.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1926bp|location=Sequence derived from alignment at S-firma_F_contig10397:126..1149- (Sphaerotrichia firma ET2_F female)
ATGGGGTCTGAGGTGCTGTACACGGAGGAGGACCTCATCGACGCCCTGGC
TGCCATCACGGCGCCCGTCGCACCCGCTCCCTCCGTGTTCCCCGCCGTGC
CAGGGCTTGACACCCCCTCCTGCCGCTTTGGCATGCTGCGGCTGGACATG
GCGACGCCCTCCCGGCAGGCCCTCCGGCAGTCCTTCATTGAGCTGCGCCC
AGAGGCACACCAGGTCGGCCTGGACGACAAACTGTCGTGGTTCGGGATTG
GGAAGGCCGCCCTGGAGGACAGAGGCGGCTACGAGCCTGTGCTGAAGGTG
TTTGCGAAGCGGGGGTGCCCCAACACCCTCCGGGGGCGGGTGTGGACGCG
GGTCCTGGGCGTCCACCTCTCCCCACTGGACGCCCAGCGGTTTAAGTCCC
TTGTGGGGAACCTGAAGGTGTGCACCCTGGCCACGGACGACATGCTGCGG
GCTGACGCGCAGCGGGTGTGCGAGGACCACAACTTCTTCCCATTTGATGG
GGTCTGAGGTGCTGTACACGGAGGAGGACCTCATCGACGCCCTGGCTGCC
ATCACGGCGCCCGTCGCACCCGCTCCCTCCGTGTTCCCCGCCGTGCCAGG
GCTTGACACCCCCTCCTGCCGCTTTGGCATGCTGCGGCTGGACATGGCGA
CGCCCTCCCGGCAGGCCCTCCGGCAGTCCTTCATTGAGCTGCGCCCAGAG
GCACACCAGGTCGGCCTGGACGACAAACTGTCGTGGTTCGGGATTGGGAA
GGCCGCCCTGGAGGACAGAGGCGGCTACGAGCCTGTGCTGAAGGTGTTTG
CGAAGCGGGGGTGCCCCAACACCCTCCGGGGGCGGGTGTGGACGCGGGTC
CTGGGCGTCCACCTCTCCCCACTGGACGCCCAGCGGTTTAAGTCCCTTGT
GGGGAACCTGAAGGTGTGCACCCTGGCCACGGACGACATGCTGCGGGCTG
ACGCGCAGCGGGTGTGCGAGGACCACAACTTCTTCCCATTTGCGGAGGTG
CTGGAGGACGTGCTCATGGCACTGTTCCGGGACCCCAAAGTCCTACACCT
CATGACGTTCTTGCCCACCATTCCAGTGGTTGGCAAGGACACGTACGGCA
AAACGACGGGCCCCTTCCCCCCTGCCGGCCTCCTCCCGTACCCCAACATT
TGCCTGTACGCCGCCCCCCTGTGCTACCTGTACCAGCGGGACTACGAGGT
GTACTACACCTTCCGCGCCATGTACGCCCGGTACTGGTGCAGGCTGGCCA
CCATCAGCACCGCGCCCTCCACCCTCCTCCCGCTGTGCAAGCTGTTTGAG
GACCTGCTGGCGCGGCTGGCGCCCCGGCTGTTCATCCACCTCAACGCCAT
GGGGACCCCGCCCCTGACCCTCGTGTTTCCGTGGATCAGGTTCGCGTTTT
CCGGGTTCCTGGAGATCAAGGAAGTGCTGTTGCTGTGGGACCGTGTGATT
GGGTTTGACCGGAGGTGCTGGAGGACGTGCTCATGGCACTGTTCCGGGAC
CCCAAAGTCCTACACCTCATGACGTTCTTGCCCACCATTCCAGTGGTTGG
CAAGGACACGTACGGCAAAACGACGGGCCCCTTCCCCCCTGCCGGCCTCC
TCCCGTACCCCAACATTTGCCTGTACGCCGCCCCCCTGTGCTACCTGTAC
CAGCGGGACTACGAGGTGTACTACACCTTCCGCGCCATGTACGCCCGGTA
CTGGTGCAGGCTGGCCACCATCAGCACCGCGCCCTCCACCCTCCTCCCGC
TGTGCAAGCTGTTTGAGGACCTGCTGGCGCGGCTGGCGCCCCGGCTGTTC
ATCCACCTCAACGCCATGGGGACCCCGCCCCTGACCCTCGTGTTTCCGTG
GATCAGGTTCGCGTTTTCCGGGTTCCTGGAGATCAAGGAAGTGCTGTTGC
TGTGGGACCGTGTGATTGGGTTTGAC
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