mRNA_S-firma_F_contig10386.552.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: A0A6H5KY19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY19_9PHAE) HSP 1 Score: 240 bits (613), Expect = 4.510e-71 Identity = 122/131 (93.13%), Postives = 129/131 (98.47%), Query Frame = 1
Query: 1 LSKDHTPSEALETLGRFETMTAKLESESKLLSSARDALSLEPMERDVLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
LSKDHTPSEALETLGRFETMTAKLESESKLLS+ARDALSLEP+ERDVLGPMQAE+TDLREVWDAMSKVWE I ELEETPWSTAVPRK+RK+LDAVQEGMRNLPNRVRQYEPF+HAQ+TLRARSESLPLLTE
Sbjct: 956 LSKDHTPSEALETLGRFETMTAKLESESKLLSAARDALSLEPIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLDAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTE 1086
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: D8LRI5_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI5_ECTSI) HSP 1 Score: 239 bits (609), Expect = 1.610e-70 Identity = 121/131 (92.37%), Postives = 129/131 (98.47%), Query Frame = 1
Query: 1 LSKDHTPSEALETLGRFETMTAKLESESKLLSSARDALSLEPMERDVLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
LSKDHTPSEALETLGRFETMTAKLESESKLLS+ARDALSLEP+ERDVLGPMQAE+TDLREVWDAMSKVWE I ELEETPWSTAVPRK+RK+L+AVQEGMRNLPNRVRQYEPF+HAQ+TLRARSESLPLLTE
Sbjct: 1330 LSKDHTPSEALETLGRFETMTAKLESESKLLSAARDALSLEPIERDVLGPMQAEITDLREVWDAMSKVWESISELEETPWSTAVPRKIRKSLEAVQEGMRNLPNRVRQYEPFEHAQMTLRARSESLPLLTE 1460
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: D3BP40_POLPP (Cytoplasmic dynein heavy chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BP40_POLPP) HSP 1 Score: 99.4 bits (246), Expect = 1.270e-21 Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 22 SEALETLGRFETMTAKLESESKLLSSARDALSLEPM-----ERDVLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
S ALET+ FE +L E++ L A+ AL L+ E D L P++ E+ DL+ VW ++ W I L ET WS VPRKVRK+L+ + ++NLPNR+RQY FDHAQ T++A ++ ++T+
Sbjct: 1229 SAALETIKIFEGRLVRLREENERLRKAKAALDLDSQGPSGGEDDRLSPVEEEMQDLKAVWTELAATWHEIDNLRETAWSAVVPRKVRKSLEDTLQKLKNLPNRIRQYSAFDHAQNTMKALLKANAIITD 1357
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: DYHC_DICDI (Dynein heavy chain, cytoplasmic n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=DYHC_DICDI) HSP 1 Score: 96.7 bits (239), Expect = 1.120e-20 Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 22 SEALETLGRFETMTAKLESESKLLSSARDALSL------EPMERDVLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
S ALETL FE +L ES LS A+ AL L ++D L P++ E+ DL+ VW +S W+ I L+ET WS +PRKVRK+L+ + ++NLPNR+RQY FDHAQ ++ + ++T+
Sbjct: 1341 STALETLKIFEGRLIRLREESDRLSKAKQALDLTDTTGSSSSDQDRLVPVEEEIQDLKAVWVELSNTWQEIDSLKETAWSAIIPRKVRKSLEDTLQKLKNLPNRIRQYSAFDHAQNLIKIYLKGNAIITD 1470
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: A0A7S4W182_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W182_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.430e-20 Identity = 53/126 (42.06%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 19 PSEALETLGRFETMTAKLESESKLLSSARDALSLEPMERD-VLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
P EA++ L +FE K + + + L A+DAL LE D + ELTD++EVW+A++ +E + E+++TPWSTAV RK+RKALD + +R+LPNRVRQY+ F H T++ LL++
Sbjct: 217 PEEAIDILTKFEFDMKKAKLDHENLIKAKDALGLEVATGDSAVSDCLDELTDMKEVWEAVTGPYESLEEVKDTPWSTAVTRKIRKALDDIMADLRSLPNRVRQYDAFTHLNDTIKGYLSGYGLLSD 342
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: A0A7S2A5L9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5L9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.520e-20 Identity = 53/126 (42.06%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 19 PSEALETLGRFETMTAKLESESKLLSSARDALSLEPMERD-VLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
P EA++ L +FE K + + + L A+DAL LE D + ELTD++EVW+A++ +E + E+++TPWSTAV RK+RKALD + +R+LPNRVRQY+ F H T++ LL++
Sbjct: 717 PEEAIDILTKFEFDMKKAKLDHENLIKAKDALGLEVATGDSAVSDCLDELTDMKEVWEAVTGPYESLEEVKDTPWSTAVTRKIRKALDDIMADLRSLPNRVRQYDAFTHLNDTIKGYLSGYGLLSD 842
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: A0A077WNM9_9FUNG (Dynein heavy chain, cytoplasmic n=2 Tax=Mucorales TaxID=4827 RepID=A0A077WNM9_9FUNG) HSP 1 Score: 94.7 bits (234), Expect = 5.270e-20 Identity = 50/128 (39.06%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 10 DHTPSEALETLGRFETMTAKLESESKLLSSARDALSLEPMERDVLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
D P A TL FE +L+ E ++ A++AL LE L P+ EL DL+ VW A++KVW +GE+ ET WS+ VPRK+R+ LD + + +PNR+RQY +++ Q LR PL+ +
Sbjct: 1324 DIKPDIATNTLSIFEGRVTRLKEEYDMVCRAKEALDLEQTSEARLEPVLEELRDLKSVWTALAKVWNALGEIRETTWSSVVPRKIRQHLDELVNSTKEMPNRMRQYAAYEYVQDMLRQLLRVNPLVAD 1451
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: UPI0006450F58 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450F58) HSP 1 Score: 94.4 bits (233), Expect = 7.180e-20 Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = 1
Query: 22 SEALETLGRFETMTAKLESESKLLSSARDALSLEPM---ERDVLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
S ALET+ FE +L E L A+ AL LE E D L P++ E+ DL+ VW ++ W I L ET WS VPRKVRK+L+ + ++NLPNR+R Y F+HAQ T++A ++ ++T+
Sbjct: 1271 STALETIKIFEGRLVRLREEHDRLRKAKAALDLEQGPAGEDDRLAPVEEEMQDLKAVWVELAATWHEIDNLRETSWSAVVPRKVRKSLEDTLQKLKNLPNRIRMYSAFEHAQNTMKALLKANAIITD 1397
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: A0A068RMQ0_9FUNG (Dynein heavy chain, cytoplasmic n=2 Tax=Mucorales TaxID=4827 RepID=A0A068RMQ0_9FUNG) HSP 1 Score: 94.0 bits (232), Expect = 9.790e-20 Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 10 DHTPSEALETLGRFETMTAKLESESKLLSSARDALSLEPMERDVLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
D P A TL FE +L+ E ++ A++AL LE L P+ EL DL+ VW A++KVW +GE+ ET WS+ VPRK+R+ +D + + +PNR+RQY +++ Q LR PL+ +
Sbjct: 1220 DIKPDIATNTLSIFEGRVTRLKEEYDMVCRAKEALDLEQTSEARLEPVLEELRDLKSVWTALAKVWNALGEIRETTWSSVVPRKIRQHVDELVNSTKEMPNRMRQYAAYEYVQDVLRQLLRVNPLVAD 1347
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Match: A0A8J4PQQ0_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PQQ0_9MYCE) HSP 1 Score: 93.2 bits (230), Expect = 1.820e-19 Identity = 50/128 (39.06%), Postives = 77/128 (60.16%), Query Frame = 1
Query: 22 SEALETLGRFETMTAKLESESKLLSSARDALSLEP----MERDVLGPMQAELTDLREVWDAMSKVWEGIGELEETPWSTAVPRKVRKALDAVQEGMRNLPNRVRQYEPFDHAQVTLRARSESLPLLTE 393
S+ALE+L FE+ +L ES + A+ AL L+ + D L P++ E+ DL+ VW +S W I L+ET WS +PRK+RK L+ ++NLPNR+RQY +DHAQ ++A + ++T+
Sbjct: 1296 SDALESLKIFESRLIRLREESDRIKKAKAALELDQNLSSTDDDRLAPIEEEMQDLKAVWVELSNAWYEIDNLKETAWSAIIPRKIRKTLEDTLTKLKNLPNRIRQYSAYDHAQNLIKAYLKGNAIITD 1423 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10386.552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10386.552.1 >prot_S-firma_F_contig10386.552.1 ID=prot_S-firma_F_contig10386.552.1|Name=mRNA_S-firma_F_contig10386.552.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=131bp LSKDHTPSEALETLGRFETMTAKLESESKLLSSARDALSLEPMERDVLGPback to top mRNA from alignment at S-firma_F_contig10386:1695..3429- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10386.552.1 ID=mRNA_S-firma_F_contig10386.552.1|Name=mRNA_S-firma_F_contig10386.552.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1735bp|location=Sequence derived from alignment at S-firma_F_contig10386:1695..3429- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10386:1695..3429- >mRNA_S-firma_F_contig10386.552.1 ID=mRNA_S-firma_F_contig10386.552.1|Name=mRNA_S-firma_F_contig10386.552.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=786bp|location=Sequence derived from alignment at S-firma_F_contig10386:1695..3429- (Sphaerotrichia firma ET2_F female)back to top |