mRNA_S-firma_F_contig10381.545.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: A0A7S2RLK3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RLK3_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.320e-21 Identity = 67/222 (30.18%), Postives = 113/222 (50.90%), Query Frame = 1
Query: 13 NPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMDSLTRHVARVHDLVTRKGRVKPKRLSALVATLPDAG---------------------KQARMAAAPAADGRAPGPNPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHLDSKALGAL-SDKDVFIVLDPVVKDIKFDLPASGVVEYCTIQVGHPDMFICNGRSLASSFAPAALD 612
NPDL +N+A VL YLE+Y+ A + +AK +DPSLPA + +DS+ R + +++ R GR+KPKRL+ LV +L A + ++ A G NPG + LK+ + ++ P ++ D + +S+YHL++ + + S++D I+ +P ++ + F + Y +Q+ P F NG+ L +FA AALD
Sbjct: 236 NPDLYFNRAQVLVYLEEYESAVEDYEQAKVLDPSLPADAKIDSIVRKIDNSTEMIKRNGRIKPKRLATLVKSLKTAASVELKVDYSRVRNINGNNRVSEPVKLERVQALKDLVQGDNPGVAIDLKIVLPLARNGEPPVSFLVTDRDGVMFVLSVYHLEASVITKIKSERDHIIIAEPSLRTVNFRQHS-----YQLVQLKMPTQFFVNGKILEKNFAHAALD 452
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: A0A6H5LCT9_9PHAE (TTC5_OB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.960e-14 Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = 1
Query: 1 GAQDNPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMDSLTRHVARVHDLVTRKGRVKPKRLSALVATLPDAGKQARMAAAPAADGRAP---GPNPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHLDSKALGALSDKDVFIVLDPVVKDIKFDL--PAS 513
G + NPDL +N+A V Y EDY ++ L A+ +DP LP A+ S+ V R+ LV +KG +K KRLS L+A L ++ + G G N G + LK+ + A Q+ P LV+VD + + +SLY + ++A + +D +V +P + I PAS
Sbjct: 318 GEEGNPDLFFNRAQVFQYREDYPESIRDLRLARELDPLLPVNQALHSIEAGVDRLSKLVEKKGGLKTKRLSQLIALLRGESLRSGLGDTYRLVGLRELRLGRNMGVAVALKVVMPAGQSSQPPERLVVVDRSGECAVLSLYSVSTEAYEKIQSRDTLVVRNPDFRTISLGTRPPAS 493
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: D7G7M4_ECTSI (TTC5_OB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M4_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 3.320e-14 Identity = 55/167 (32.93%), Postives = 85/167 (50.90%), Query Frame = 1
Query: 1 GAQDNPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMDSLTRHVARVHDLVTRKGRVKPKRLSALVATLPDAGKQARMAAAPAADGRAP---GPNPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHLDSKALGALSDKDVFIVLDPVVKDI 492
G + NPDL +N+A V Y EDY ++ A+ +DP LP A+ S+ V R+ LV +KG +K KRLS L+A L + + G G N G + LK+ + A Q+ P LV+VD + + +SLY + ++A + KD +V +P + I
Sbjct: 176 GEKGNPDLFFNRAQVFQYREDYPESIRDFRLARELDPMLPVNQALHSIETGVDRLSKLVEKKGGLKTKRLSQLIAPLRGESLRRGLGGTYHLVGLRELRLGRNMGVAVALKVVMPAGQSSQPPERLVVVDRSGECAVLSLYSISAEACEKIQSKDTLVVRNPDFRTI 342
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: A0A8B6BZS7_MYTGA (TTC5_OB domain-containing protein n=3 Tax=Mytilus TaxID=6548 RepID=A0A8B6BZS7_MYTGA) HSP 1 Score: 72.0 bits (175), Expect = 3.300e-11 Identity = 63/229 (27.51%), Postives = 108/229 (47.16%), Query Frame = 1
Query: 4 AQDNPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMD-SLTRHVARVHDLVTRKGRVKPKRLSALVATLPDAGKQARMAAAPAADGRAPGP-------------------NPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHLDSKALGALSDKDVFIVLDPVVKDIKFDLPASGVVEYCTIQVGHPDMFICNGRSLA-SSFAPAALDITAFS 627
A++NPDL +N++ Y EDYQ A DG A +DP+ + +L ++ + DL +KG++K K++ ALV T+ D + P A G+ GP N K++L K+ + + +P MVD + + V++Y+L S+ G V I +P ++ IK + + +I+V P + + NG+ L AP+ L ++A S
Sbjct: 206 AKNNPDLHFNRSVAFKYEEDYQAAVDGFSMASKLDPTWTEPGEHEKNLMSYLTNLRDLTEQKGKIKDKKIKALVQTIKD------VDLGPYAGGKYTGPSGKTINLVQCKFCDLKPQLNAEKVILGKVVCTVQSYEPVPFSFCMVDDDEQCLPVNVYNL-SQGSGVKIGDSVSIP-EPYLQTIKVSHKDVNL-NFNSIRVNSPLVLVVNGKKLGIEKQAPSVLAVSAVS 425
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: UPI001CF38B39 (tetratricopeptide repeat protein 5-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF38B39) HSP 1 Score: 62.8 bits (151), Expect = 5.030e-8 Identity = 58/222 (26.13%), Postives = 106/222 (47.75%), Query Frame = 1
Query: 4 AQDNPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLP-AASAMDSLTRHVARVHDLVTRKGRVKPKRLSALVATL--------------PDAGKQARMAAAPAADGRAPGPNPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHLDSKALGALSDKDVFIVLDPVVKDIKFDLPASGVVEYCTIQVGHPDMFICNGRSLASS-FAPAALDITA 621
A +NPDL +N+A + E+Y+ A +A+S+DP D L + + LV KG++KPKRL+A+V +L G+ ++ P A + G NP K+ + K+ D +P + M+D + V++Y++ A A+ D + +P ++ F + ++ +I+V +P + + N + L S+ AP+ L +TA
Sbjct: 223 ASNNPDLHFNRAMAYKFQEEYKLALSDFKQAQSLDPGWSDPTDEKDKLLSLLTKTLALVEGKGKLKPKRLNAMVKSLGPSDLGPYSGGSYSSQCGQTIQLDHVPFAKLQT-GVNPNKVTVGKVVGFVPVDDPVPYIFAMIDRDNHCWPVTVYNMAVGAGFAVGDS--VAIPEPFCQETDF-VEDGQTFKFFSIRVDNPIVLVVNKKKLGSNRLAPSTLAVTA 440
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: A0A6J2YDY6_SITOR (tetratricopeptide repeat protein 5-like n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YDY6_SITOR) HSP 1 Score: 60.1 bits (144), Expect = 4.190e-7 Identity = 54/209 (25.84%), Postives = 94/209 (44.98%), Query Frame = 1
Query: 4 AQDNPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMDS-LTRHVARVHDLVTRKGRVKPKRLSALVATLPDA--------------GKQARMAAAPAADGRAPGPNPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHL-DSKALGALSDKDVFIVLDPVVKDIKFDLPASGVVEYCTIQVGHPDMFICNGRSL 582
A+ DL YN+ Y E+Y+ A + A DP+ + L R++ V DLVT KG++KPK+L ++ ++ G+QA++ + + PG N K++L K+ S D +P VD N + ++++L D K G + V I +P V D+ F + + ++V P + + N + L
Sbjct: 228 AKSTSDLHYNKGITFKYQEEYKLALESFNEASLYDPTWEQPGEKEKQLLRYLQEVQDLVTTKGKLKPKKLHQILTSIDSKQLGPYGGGSYISSKGEQAKLTEI-SYNSMKPGLNEEKVILGKVICSVRNEDTVPFTFCSVDKNGSIIVTTVFNLADGK--GVIIGDSVAIP-EPFVTDVNFSYKDNNF-SFRMVRVETPVIMVVNSKKL 431
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: A0A7L1BKR4_GYMTI (TTC5 protein (Fragment) n=5 Tax=Passeriformes TaxID=9126 RepID=A0A7L1BKR4_GYMTI) HSP 1 Score: 59.3 bits (142), Expect = 7.390e-7 Identity = 56/194 (28.87%), Postives = 92/194 (47.42%), Query Frame = 1
Query: 13 NPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMD-SLTRHVARVHDLVTRKGRVKPKRLSALVATLP-----DAGKQARMAAAPAADGRAPGPNPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHLDSKALGALSDKDVFIVLDPVVKDIKFDLPASGVVEYCTIQVGHPDMFICNGR 576
NPDL N+AT+L YLE +Q A +GL RA + P +L ++R+ L+ +G+++ KR L +P G +P A R PGPNP ++LL ++ S + +P + + DG AV++Y+ + A G ++ D V DPV+ + + I+V P + NG+
Sbjct: 219 NPDLHLNRATLLQYLERFQAALEGLSRAAELAPGWDEPRKRHGNLVEFLSRLCSLLANRGKLRGKRRRGLAGPVPLPLLGPLGGAGGPRPSPIAALR-PGPNPQRVLLGRVLFSLAPPGGVPYTVGLQDGGGAVAAVTVYNA-APAWG-VTVGDALGVPDPVLTQHQHQHHGQ-TFSFLGIRVSSPLSLVVNGK 408
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: A0A8C3UV08_CATUS (Tetratricopeptide repeat domain 5 n=1 Tax=Catharus ustulatus TaxID=91951 RepID=A0A8C3UV08_CATUS) HSP 1 Score: 58.2 bits (139), Expect = 1.950e-6 Identity = 58/209 (27.75%), Postives = 99/209 (47.37%), Query Frame = 1
Query: 13 NPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMD-SLTRHVARVHDLVTRKGRVKPKRLSALVATLP-----DAGKQARMAAAPAADGRAPGPNPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHLDSKALGALSDKDVFIVLDPVVKDIKFDLPASGVVEYCTIQVGHPDMFICNG-RSLASSFAPAALDIT 618
+PDL N+AT+L YLE +Q A +GL RA + P +L ++R+ L+ +G+++ KR L +P G +P A R PGPNP +++L ++ S + +P + + DG AV++Y+ + A G ++ D V DP++ + + I+V P + NG R S+ AP L ++
Sbjct: 265 DPDLHLNRATLLQYLERFQAALEGLSRAAELAPRWDEPRKRHGNLLEFLSRLCGLLANRGKLRGKRRRGLAGPVPLPLLGPLGGAGGPRPSPIAALR-PGPNPQRVVLGRVLFSLAPPGGVPYAVGLQDGGGAVAAVTVYNA-APAWG-VTVGDALAVPDPLLTQHQXXXXGQ-TFSFLGIRVSSPLSLVVNGKRPPGSALAPPRLALS 469
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: UPI0014095DC0 (tetratricopeptide repeat protein 5 n=1 Tax=Catharus ustulatus TaxID=91951 RepID=UPI0014095DC0) HSP 1 Score: 58.2 bits (139), Expect = 2.020e-6 Identity = 58/209 (27.75%), Postives = 99/209 (47.37%), Query Frame = 1
Query: 13 NPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMD-SLTRHVARVHDLVTRKGRVKPKRLSALVATLP-----DAGKQARMAAAPAADGRAPGPNPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHLDSKALGALSDKDVFIVLDPVVKDIKFDLPASGVVEYCTIQVGHPDMFICNG-RSLASSFAPAALDIT 618
+PDL N+AT+L YLE +Q A +GL RA + P +L ++R+ L+ +G+++ KR L +P G +P A R PGPNP +++L ++ S + +P + + DG AV++Y+ + A G ++ D V DP++ + + I+V P + NG R S+ AP L ++
Sbjct: 315 DPDLHLNRATLLQYLERFQAALEGLSRAAELAPRWDEPRKRHGNLLEFLSRLCGLLANRGKLRGKRRRGLAGPVPLPLLGPLGGAGGPRPSPIAALR-PGPNPQRVVLGRVLFSLAPPGGVPYAVGLQDGGGAVAAVTVYNA-APAWG-VTVGDALAVPDPLLTQHQXXXXGQ-TFSFLGIRVSSPLSLVVNGKRPPGSALAPPRLALS 519
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Match: UPI000FD6A123 (tetratricopeptide repeat protein 5 n=1 Tax=Corapipo altera TaxID=415028 RepID=UPI000FD6A123) HSP 1 Score: 56.2 bits (134), Expect = 4.400e-6 Identity = 54/197 (27.41%), Postives = 91/197 (46.19%), Query Frame = 1
Query: 4 AQDNPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMD-SLTRHVARVHDLVTRKGRVKPKRLSALVATLP-----DAGKQARMAAAPAADGRAPGPNPGKMLLLKLAISASQADHIPAVLVMVDGNVDSVAVSLYHLDSKALGALSDKDVFIVLDPVVKDIKFDLPASGVVEYCTIQVGHPDMFICNGR 576
A +NPDL N+AT+L YLE +Q A +GL RA ++DP+ +L ++R+ L+ +G+++ KR L +P G +P RA G NP +++L ++ S + +P + + DG AV++Y+ + D V DP+V + + I+V P + NGR
Sbjct: 15 AANNPDLHLNRATLLQYLERFQAALEGLSRAMTLDPTWEEPRKRHRNLLEFLSRLCGLLENRGKLRGKRRRGLAGPVPLPLLGPLGGPGGPRPSPLPTLRA-GNNPQRVVLGRVLFSLAPPGGVPYAVGLQDGGGAVAAVTIYNAGPD--WGVHVGDALAVPDPLVT-LHQHQHQGQTFSFMGIRVSSPLSLVVNGR 207 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10381.545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10381.545.1 >prot_S-firma_F_contig10381.545.1 ID=prot_S-firma_F_contig10381.545.1|Name=mRNA_S-firma_F_contig10381.545.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=210bp GAQDNPDLAYNQATVLDYLEDYQQAFDGLLRAKSIDPSLPAASAMDSLTRback to top mRNA from alignment at S-firma_F_contig10381:129..901+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10381.545.1 ID=mRNA_S-firma_F_contig10381.545.1|Name=mRNA_S-firma_F_contig10381.545.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=773bp|location=Sequence derived from alignment at S-firma_F_contig10381:129..901+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10381:129..901+ >mRNA_S-firma_F_contig10381.545.1 ID=mRNA_S-firma_F_contig10381.545.1|Name=mRNA_S-firma_F_contig10381.545.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1260bp|location=Sequence derived from alignment at S-firma_F_contig10381:129..901+ (Sphaerotrichia firma ET2_F female)back to top |