mRNA_S-firma_F_contig10380.544.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: D8LME6_ECTSI (Inversin protein alternative isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME6_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 3.330e-138 Identity = 231/427 (54.10%), Postives = 283/427 (66.28%), Query Frame = 1
Query: 121 MAADHQLLKEVEKGNLQGVEESLQAGASADGSRRLHYRPLMCAARWGFVSIAQRLIEGGADPEATASPDVHHGFANHFYPEGSRALHAAVSHGEEVGMIKVLIEGGADPDCPDIDGCSPLANACSLMFSDERLAIATELLKRGADPASKTFKGTTPLHFAASKGDCAMLELLLAAAPETLNAVNADHGTPMXXXXXXXXXXXXXXLLSAGANDEAILAHERSSLFTAVSRGFVDVVRVLLS-PKGVRALGGTAEISHAMCCAMQQEQAKILDLLLGVEGEKRRRAWANRLVVVPGRLSAKQVEVPALQCAVMYGCLASTHVLLASGADERKVAR-PDVDRSMVIGLLLDAEDKDPKTAGEIKRALERGPAYRARSWRWXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVSVHIFRPTSRLFFTTRFER 1395
M AD +LL+EV+ GNL+GV+E+L AGA+ +GS RL RPL+CAARWG IA+RLIE GA+ E + + G + YP GS ALHAAVS G EVGMI+VL++GGA+PD DIDGC+ LANACS++ DERLA+ ELL+ GA SKTFKGT+P HFAASKGDC +LELLL+ AP +N VN D GTPM L+SAGA+DEA+L+HER SLF A+ RGF +VVRVLLS P+ ++A GG EI HAMC AMQQ Q + L LL+ V G+ R W+N+LV+VPGRLS QVEVPALQCAV Y C+ ST +LL +GADER + D +GLLLDAED+D + A EI R L R PA+RARSWRW + IF P R FFT RFE+
Sbjct: 1 MDADKRLLQEVQNGNLKGVDEALAAGANVNGSSRLSCRPLICAARWGNCKIAKRLIEKGANLELAVTDETGFGGISPLYPVGSNALHAAVSFGVEVGMIRVLLDGGANPDAQDIDGCTALANACSVLDPDERLAMVRELLRGGATAFSKTFKGTSPAHFAASKGDCRLLELLLSEAPAMINHVNDDFGTPMAFAASTGQDKAVSFLVSAGASDEAVLSHERGSLFMALCRGFTNVVRVLLSSPEALKAAGGYDEIRHAMCWAMQQGQPESLRLLISVGGKTR--YWSNQLVLVPGRLSDNQVEVPALQCAVCYQCVESTKLLLEAGADERFLTNHKPADLLGAVGLLLDAEDRDLQKAAEIVRVLRRAPAFRARSWRWPGATATPPVDAGSDPGDDAATP-------LGAQIFWPAGRNFFTKRFEK 418
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 202 bits (515), Expect = 6.760e-57 Identity = 152/432 (35.19%), Postives = 211/432 (48.84%), Query Frame = 1
Query: 109 MPGSMAADHQLLKEVEKGNLQGVEESLQAGASADGSRRLHYRPLMCAARWGFVSIAQRLIEGGADPEATASPDVHHGFANHFYPEGSRALHAAVSHGEEVGMIKVLIEGGADPDCPDIDGCSPLANACSLMFSDERLAIATELLKRGADPASKTFKGTTPLHFAASKGDCAMLELLLAAAPETLNAVNADHGTPMXXXXXXXXXXXXXXLLSAGANDEAILAHERSSLFTAVSRGFVDVVRVLLSPKGVRALGGTAEISHAMCCAMQQEQAKILDLLLGVEGEKRRRAWANRLVV--VPGRLSAKQVEVPALQCAVMYGCLASTHVLLASGADERKVARPDVDRSMVIGLLL-DAEDKDPKTAGEIKRALERGPAYRARSWRWXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVSVHIFRPTSRLFFTTRFER 1395
MPG+ A D +LL EVEKGNL GV++ L GA+ DGSR L Y P+M AAR G ++ + LI GAD E A +P GSRA+HAA+S GE + VL+E GAD + D G +PL +D +A EL K GA P K G + +H AA G+ ++ ++L P LN ++ TPM LLSAGA+D + + +++ A G +VR++L G+ +GG I +++ A+Q QAKIL++L+ EGE+ RR WA + P L+A V V A+ HVLL++GA E S +G+ L + P+ + R L+RGPAYRARS+ W + V IFRPT FF TRF R
Sbjct: 1 MPGAAAGDRRLLMEVEKGNLSGVKKLLAGGANVDGSRELEYPPIMGAARNGNAAMLKLLISKGADLETEAR-----------FPAGSRAIHAAIS-GENPTALSVLLEAGADFNSRDGAGETPLMLTA---LADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGV-DEQNAAILWACDGGHPRMVRMMLE-HGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAI------------HVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVTLSSRTRGA------NSFGVQIFRPTGTRFFATRFAR 397
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI) HSP 1 Score: 200 bits (509), Expect = 6.900e-56 Identity = 144/384 (37.50%), Postives = 204/384 (53.12%), Query Frame = 1
Query: 124 AADHQLLKEVEKGNLQGVEESLQAGASADGSRRL--HYRPLMCAARWGFVSIAQRLIEGGAD-PEATASPDVHHGFANHFYPEGSRALHAAVSHGEEVGM--IKVLIEGGADPDCPDIDGCSPLANACSL-MFSDERLAIATELLKRGADPASKTFKGTTPLHFAASKGDCAMLELLLAAAP-ETLNAVNADHGTPMXXXXXXXXXXXXXXLLSAGANDEAILAHERSSLF-TAVSRGFVDVVRVLLSPKGVRALGGTAEI-SHAMCCAMQQEQAKILDLLLGVEGEKRRRAWANRLVVVPGRLSAKQVEVPALQCAVMYGCLASTHVLLASGADERKVARPDVDRSMVIGLLLDAEDKDPKTAGEIKRALERGPAYRARSWRW 1248
+AD LL EV+ GN +GVE L AGAS DGS + P++ AA G S+ + L++ GAD +T P +P GSRA+H AVS G + ++ LI+ GAD + + GC+PL AC + ER+ +A ELLK G D G LH+AA G+ A+++ LL+ TLN D TP+ LLSAGA+ + F +A + G+ ++R+L S +G+ A+GG A + +++ CA ++ +A+IL LLL EG++R+ WA R +V+ GR P + A YG LA+ VLLA+GADE + VIG L + DP A I R L+RGPAYRARSW W
Sbjct: 4 SADDLLLVEVQNGNKRGVERYLAAGASIDGSPHSGEEFPPVVFAAAVGSASMIKFLVDKGADINSSTWRPGA--------FPSGSRAIHVAVSSGYAGALDALRELIKAGADLNGRNYQGCTPLMMACRVDKEGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVL-GR--------PLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTLDPLEAAAIGRELQRGPAYRARSWAW 370
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 194 bits (493), Expect = 1.820e-53 Identity = 149/424 (35.14%), Postives = 203/424 (47.88%), Query Frame = 1
Query: 139 LLKEVEKGNLQGVEESLQAGASADGSRRLHYRPLMCAARWGFVSIAQRLIEGGADPEATASPDVH-HGFANHF-YPEGSRALHAAVSHGEEVGMIKVLIEGGADPDCPDIDGCSPLANACSLMFSDERLAIATELLKRGADPASKTFKGT--TPLHFAASKGDCAMLELLLAAAPETLNAVNADHGTPMXXXXXXXXXXXXXXLLSAGANDE-AILAHERSSLFTAVSRGFVDVVRVLLSPKGVRALGGTAEISHAMCCAMQQEQAKILDLLLGVEGEKRRRAWANRLVVVPGRLSAKQVEVPALQCAVMYGCLASTHVLLASGADERKVARPDVDRSMVIGLLLDAEDKDPKTAGEIKRALERGPAYRARSWRWXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVSVHIFRPTSRLFFTTRFER 1395
LL VEKG+LQG E L+AGA+ADG+ PL AA G + I + LI+ GAD + T+S D GF + + G+ LH A++ GE + +++L+ GADP+ D GC+PL C F + + T LH AA+ +L LLL+ AP T+N N T + LLSAGA D ++ A+ SL AV G VVRVLL +GV+A+GG +S+A+ ++ + +IL +LL VEGE++R WA RL G PAL A L + +LL +GADE D S +G L A K+P T+ + R LERGPA+RARSW W + V IFRPT FF+ RF R
Sbjct: 10 LLHHVEKGSLQGAIEMLKAGANADGTSEAATSPLFLAANRGRIDILKLLIDNGADLDGTSSLDKFADGFTGNLPFEGGTTPLHGALA-GENLDALRLLLLAGADPNLADGKGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLLD-RGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWA-RLRHTDG--------TPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAWAAESSEAPAASGTVCSMKGGRAT------LDVRIFRPTGNQFFSARFSR 416
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 186 bits (473), Expect = 6.160e-49 Identity = 139/397 (35.01%), Postives = 196/397 (49.37%), Query Frame = 1
Query: 82 SPL--TRRRTTMPGSMAADHQLLKEVEKGNLQGVEESLQAGASADGSRRLHYRPLMCAARWGFVSIAQRLIEGGADPEATASPDVHHGFANHFYPEGSRALHAAVSHGEEVGMIKVLIEGGADPDCPDIDGCSPLANACSLMFS---DERLAIATELLKRGADPASKTFKGTTPLHFAASKGDCAMLELLLAAAPETLNAVNADHGTPMXXXXXXXXXXXXXXLLSAGANDEAILAH-ERSSLFTAVSRGFVDVVRVLLSPKGVRALGGTAEISHAMCCAM--QQEQAKILDLLLGVEGEKRRRAWANRLVVVPGRLSAKQVEVPALQCAVMYGCLASTHVLLASGADERKVARPDVDRSMVIGLLLDAEDKDPKTAGEIKRALERGPAYRARSWRW 1248
SPL T R+ +AA QLL + + N GVE +L AGAS DGS L +RP++ AA V +A+ LI+ AD + + D+ +G RALH A++H V + ++L++ GADPD + G +PL C L S ++R +A E T L FAA++ ++++LL AP TLN D TP+ LLSAGA A + L AV +VVRVLL+ +G++A+GG I A+ A ++ +A I+ +LL EG +R WA + E P L AV +G +++T VLLA+GADE V+G + +DP G I R LERGPAYRARSW W
Sbjct: 95 SPLSTTMARSATKPQLAA--QLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINH-YNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWAR----------CRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAW 478
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE) HSP 1 Score: 185 bits (470), Expect = 1.800e-48 Identity = 138/397 (34.76%), Postives = 194/397 (48.87%), Query Frame = 1
Query: 82 SPL--TRRRTTMPGSMAADHQLLKEVEKGNLQGVEESLQAGASADGSRRLHYRPLMCAARWGFVSIAQRLIEGGADPEATASPDVHHGFANHFYPEGSRALHAAVSHGEEVGMIKVLIEGGADPDCPDIDGCSPLANACSLMFS---DERLAIATELLKRGADPASKTFKGTTPLHFAASKGDCAMLELLLAAAPETLNAVNADHGTPMXXXXXXXXXXXXXXLLSAGANDEAILAH-ERSSLFTAVSRGFVDVVRVLLSPKGVRALGGTAEISHAMCCAM--QQEQAKILDLLLGVEGEKRRRAWANRLVVVPGRLSAKQVEVPALQCAVMYGCLASTHVLLASGADERKVARPDVDRSMVIGLLLDAEDKDPKTAGEIKRALERGPAYRARSWRW 1248
SPL T R+ +AA QLL + + N GVE +L AGAS DGS L +RP++ AA G V +A LI+ A+ + + D+ +G RALH A++H V + ++L++ GADPD + G +PL C L S ++R +A E T L FAA++ ++++LL AP TLN D TP+ LLSAGA A + L AV +VVRVLL+ +G+ A+ G I A+ A ++ +A I+ +LL EG +R WA + E P L CAV +G +++T VLLA+GADE V+G + +DP G I R L RGPAYRARSW W
Sbjct: 103 SPLSTTMARSVTKPQLAA--QLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEVLGKGVRALHVAINH-YHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWAR----------CRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAW 486
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 145 bits (367), Expect = 3.960e-35 Identity = 120/382 (31.41%), Postives = 173/382 (45.29%), Query Frame = 1
Query: 259 GFVSIAQRLIEGGADPEATASPDVHHGFANHFYPEGSRALHAAVSHGEEVGMIKVLIEGGADPDCPDIDGCSPLANACSLMFSDERLAIATELLKRGADPASKTFKGTTPLHFAASKGDCAMLELLLAAAPETLNAVNADHGTPMXXXXXXXXXXXXXXLLSAGANDEAILAHERSSLFTAVSRGFVDVVRVLLSPKGVRALGGTAEISHAMCCAMQQEQAKILDLLLGVEGEKRRRAWANRLVV--VPGRLSAKQVEVPALQCAVMYGCLASTHVLLASGADERKVARPDVDRSMVIGLLLDAEDK-DPKTAGEIKRALERGPAYRARSWRWXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVSVHIFRPTSRLFFTTRFER 1395
G ++ + LI GA+ E A +P GSRA+HAA+S GE + VL+E GAD + D G +PL +D +A EL K GA P K G + +H AA G+ ++ ++L P LN ++ TPM LLSAGA+D + + +++F A G +VR++L G+ +GG I +++ A+Q QAKIL++L+ EGE RR WA + P L+A V V + HVLL++GA E R +G+ L + P+ + R L+RGPAYRARS+ W V I+RPT FF TRF R
Sbjct: 106 GNTAMLKLLISKGANLETEAR-----------FPAGSRAIHAAIS-GENPTALCVLLEAGADFNSRDGAGETPLMLTA---LADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGV-DEQNAAIFWACDGGHPRMVRMMLE-HGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVM------------HVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVALSSRTRGAK------SFGVQIYRPTGTRFFATRFAR 452
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: D7FLL0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL0_ECTSI) HSP 1 Score: 110 bits (274), Expect = 1.030e-22 Identity = 99/348 (28.45%), Postives = 148/348 (42.53%), Query Frame = 1
Query: 265 VSIAQRLIEGGADPEA---TASPDVHHGFANH-FYP-EGSRALHAAVSHGEEVGMIKVLIEGGADPDCPDIDGCSPLANACSLMFSDERLAIATE-LLKRGADPASKTFKGTTPLHFAASKGDCAMLELLLAAAPETLNAVNADHGTPMXXXXXXXXXXXXXXLLSAGANDEAILAHERSSLFTAVSRGFVDVVRVLLSPKGVRALGGTAEISH-AMCCAMQQEQAKILDLLLGVEGEKRRRAWANRLVVVPGRLSAKQVEVPALQCAVMYGCLASTHVLLASGADERKVARPDVDRSMVIGLL-------------LDAEDKDPKTAGEIKRALERGPAYRARSWRW 1248
IAQ LIE GA A S N F P +G A HAA+ +++ ++ +L+ GADP + G +PL L A E L+K G +P +G T A G+ + +LA +P L + D + + LLS GA + L A+ +G D+V++LL+ + A+GG + A+ CA+ Q + KIL ++L + GE+ WA+ + G L L + Y AS LLA+GA+E + VIG + +DP EI+R +ER PA+RARSW W
Sbjct: 8 TEIAQLLIERGAHVNAGVTNPSMGTRERVVNSTFLPMQGENAFHAAICFAKKMDLVDLLLRAGADPSAGNKLGITPLMCLAREEPPGPWLECALEVLIKAGVNPDQVDAEGWTAFLHAVEVGNPEKIRRILALSPAALGRIAWDGMSALYVACNEGHLSVVSCLLSLGAKHPRTTIRDHCPLAVAIIKGHEDIVKILLA--NLSAVGGVELAAEMALTCAITQSRGKILRMMLNITGEENAARWADSDWGLAGSL---------LHYSCGYILPASVSALLAAGANENATDQAGQRPIDVIGTMDLQNPPLSPLHPRTPTRFRDPVKEAEIRRTVERAPAFRARSWAW 344
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: V4J435_9GAMM (Uncharacterized protein n=2 Tax=Chromatiaceae TaxID=1046 RepID=V4J435_9GAMM) HSP 1 Score: 67.8 bits (164), Expect = 2.000e-9 Identity = 65/177 (36.72%), Postives = 86/177 (48.59%), Query Frame = 1
Query: 175 VEESLQAGASADGSRRL--HYRPLMCAAR----WGFVSIAQRLIEGGADPEATASPDVHHGFANHFYPEGSRALHAAVSHGEEVGMIKVLIEGGADPDCPDIDGCSPLANACSLMFSDER--LAIATELLKRGADPASKT---FKGTTPLHFAASKGDCAMLELLL--AAAPETLNA 666
V L AGA + +R L H+RPL A G + I + LI GAD A + G LHAAV E + +IK++++ GADP+ PD + SPL FS E+ +A LL+ GA+ F G T L AASK D AM+ELLL A P+T +A
Sbjct: 17 VSALLSAGADPNLARSLPPHWRPLGYAIEELEFGGSLDIVRLLIANGADVNAV------------YVDTGLTGLHAAV-FSENIEVIKLVLDAGADPNIPDNEDTSPLK------FSVEQGSFEMAKLLLEYGAERTINEAGGFCGCTALALAASKLDIAMIELLLKNGADPDTRDA 174
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Match: A0A117E3E4_ASPNG (Unnamed protein product n=2 Tax=Aspergillus TaxID=5052 RepID=A0A117E3E4_ASPNG) HSP 1 Score: 67.0 bits (162), Expect = 5.490e-8 Identity = 51/138 (36.96%), Postives = 71/138 (51.45%), Query Frame = 1
Query: 265 VSIAQRLIEGGADPEATASPDVHHGFANHFYPEGSRALHAAVSHGEEVGMIKVLIEGGADPDCPDIDGCSPLANACSLMFSDERLAIATELLKRGADPASKTFKGTTPLHFAASKGDCAMLELLLAAAPETLNAVNAD 678
V+I Q L++ GADPE +S +GS A++ A S G+ V I+VLI G + D G SPL +AC ++E + I LL+ GA T + TPLH AA KG +L++LL E N +N D
Sbjct: 1186 VAILQLLLDAGADPELESS-------------DGSTAINKAASQGQ-VNSIRVLIRRGVNVHHRDDAGWSPLLDACGTTPNEEAVRI---LLESGARSTDTTPREQTPLHQAAIKGQLDILKILL----EYRNVLNID 1302 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10380.544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10380.544.1 >prot_S-firma_F_contig10380.544.1 ID=prot_S-firma_F_contig10380.544.1|Name=mRNA_S-firma_F_contig10380.544.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=466bp SFLRAVAASAEAATAFTPPVRTAAHPHSPLTRRRTTMPGSMAADHQLLKEback to top mRNA from alignment at S-firma_F_contig10380:1033..4645- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10380.544.1 ID=mRNA_S-firma_F_contig10380.544.1|Name=mRNA_S-firma_F_contig10380.544.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3613bp|location=Sequence derived from alignment at S-firma_F_contig10380:1033..4645- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10380:1033..4645- >mRNA_S-firma_F_contig10380.544.1 ID=mRNA_S-firma_F_contig10380.544.1|Name=mRNA_S-firma_F_contig10380.544.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2796bp|location=Sequence derived from alignment at S-firma_F_contig10380:1033..4645- (Sphaerotrichia firma ET2_F female)back to top |