mRNA_S-firma_F_contig10354.505.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: A0A482UNB5_9ARCH (30S ribosomal protein S17 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UNB5_9ARCH) HSP 1 Score: 236 bits (602), Expect = 6.620e-77 Identity = 120/157 (76.43%), Postives = 133/157 (84.71%), Query Frame = 1
Query: 61 QTEKAFQKQDAVFVG---AALRKGAKKNLRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVESVPESGAIRSKKAFRVF 522
QTEKAFQKQ VF+G A +K K +RY R+VGLGFKTP AI+GTYIDKKCPFTGNV+IRGRILKGVV STKM RTIVIRRDYLR++ KYRR+EKRH LSAH SPAF VKEGDVVTVGQCRPL+KTVRFNVLKVES E+GA+R+KK FRVF
Sbjct: 2 QTEKAFQKQPTVFLGYKKLAAKKAVKAGMRYTRNVGLGFKTPVTAIKGTYIDKKCPFTGNVAIRGRILKGVVTSTKMHRTIVIRRDYLRFISKYRRYEKRHKTLSAHVSPAFLVKEGDVVTVGQCRPLSKTVRFNVLKVESATEAGAVRAKKTFRVF 158
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: A0A5A8EL75_CAFRO (Ribosomal_S17_N domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EL75_CAFRO) HSP 1 Score: 231 bits (588), Expect = 1.020e-74 Identity = 115/162 (70.99%), Postives = 135/162 (83.33%), Query Frame = 1
Query: 37 MAETAHVDQTEKAFQKQDAVFVGAALRKGAKKNLRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVESVPESGAIRSKKAFRVF 522
MAE++ +DQ+EKAFQKQD VF+ + R+ +S+GL KTP+ AIEG YIDKKCPFTGNVSIRGRILKGVV+STKM+RTIVIRRDYL Y+ KYRRFEKRH N++AH SP FRVKEGD+VTVGQCRPLAKTVRFNV+KVE+V ++ A SKKAFRVF
Sbjct: 1 MAESSVLDQSEKAFQKQDNVFIARTKPVTKGRGQRWVKSIGLAVKTPKAAIEGNYIDKKCPFTGNVSIRGRILKGVVISTKMNRTIVIRRDYLHYISKYRRFEKRHKNVTAHVSPCFRVKEGDIVTVGQCRPLAKTVRFNVIKVEAVTDANATASKKAFRVF 162
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: K3WTQ0_GLOUD (Ribosomal_S17_N domain-containing protein n=11 Tax=Oomycota TaxID=4762 RepID=K3WTQ0_GLOUD) HSP 1 Score: 228 bits (580), Expect = 1.520e-73 Identity = 109/157 (69.43%), Postives = 132/157 (84.08%), Query Frame = 1
Query: 52 HVDQTEKAFQKQDAVFVGAALRKGAKKNLRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVESVPESGAIRSKKAFRVF 522
HV+Q EK+FQKQD VF+ + G K R++++VGLGFKTP+ AIEG Y+DKKCPFTGN+SIRGRILKGVV+STKM RTI++RRDYL +VKKY+RFEKRH N++AH SPAFRVKEGDVVT+GQCRPLAKTVRFNVL+VE+ E+ I +K FR F
Sbjct: 3 HVEQNEKSFQKQDGVFLASKKFAGKKTGPRFYKNVGLGFKTPKAAIEGQYVDKKCPFTGNISIRGRILKGVVLSTKMKRTIIVRRDYLHFVKKYKRFEKRHKNVAAHVSPAFRVKEGDVVTIGQCRPLAKTVRFNVLEVEAASETKPINVRKQFRQF 159
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: A0A7S1GCD8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCD8_9STRA) HSP 1 Score: 227 bits (579), Expect = 2.390e-73 Identity = 122/157 (77.71%), Postives = 135/157 (85.99%), Query Frame = 1
Query: 61 QTEKAFQKQDAVFVGAA--LRKGAKKNLRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVE-SVPESGAIRSKKAFRVF 522
QTEKAFQKQD VFVGA L+KG K R++++VGLGFKTP+EAIEG YIDKKCPFTGNVSIRGRILKGVV STKM+RTIVIRRDYLR+VKKYRRFEKRH+ LSAH SPAFRVKEGDVV VGQCRPL+KTVRFNVLK+E S + G KKAF+ F
Sbjct: 11 QTEKAFQKQDTVFVGAKRQLKKG--KTGRFYKNVGLGFKTPKEAIEGDYIDKKCPFTGNVSIRGRILKGVVTSTKMNRTIVIRRDYLRFVKKYRRFEKRHTTLSAHVSPAFRVKEGDVVVVGQCRPLSKTVRFNVLKIEKSASDKGG---KKAFKSF 162
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: M4C184_HYAAE (Ribosomal_S17_N domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=M4C184_HYAAE) HSP 1 Score: 229 bits (583), Expect = 9.240e-73 Identity = 110/157 (70.06%), Postives = 130/157 (82.80%), Query Frame = 1
Query: 52 HVDQTEKAFQKQDAVFVGAALRKGAKKNLRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVESVPESGAIRSKKAFRVF 522
HVDQTEKA+QKQ VF+ + G KK R+++ VGLGFKTP+ AIEG Y+DKKCPFTGN+SIRGRILKGVV+STKM RTI++RRDYL +VKKY+RFEKRH N++AH SP FRVKEGDVVT+GQCRPLAKTVRFNVL+VE E+ I +K FR F
Sbjct: 90 HVDQTEKAYQKQQGVFLASKKFAGKKKGPRFYKEVGLGFKTPKSAIEGQYVDKKCPFTGNISIRGRILKGVVLSTKMKRTIIVRRDYLHFVKKYKRFEKRHKNVAAHLSPCFRVKEGDVVTIGQCRPLAKTVRFNVLEVEPASETKPINVRKQFRQF 246
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: A0A0H5R4H7_9EUKA (Ribosomal_S17_N domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4H7_9EUKA) HSP 1 Score: 225 bits (573), Expect = 3.550e-72 Identity = 110/166 (66.27%), Postives = 130/166 (78.31%), Query Frame = 1
Query: 34 SMAETAHVDQTEKAFQKQDAVFVGAA---LRKGAKKNLRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVESVPESGAIRSKKAFRVF 522
+M++ H++Q EKAFQKQ +F G +KG K Y+++VGLGFKTP+EAIEG YIDKKCPFTGN+SIRGRIL+GVV STKM RTIVIRRDYL YVKKY RFEKRH N+S HCSP FR+ EGDVVTVGQCRPL+KTV FNVL++E A+ SKK F+ F
Sbjct: 15 AMSQAIHIEQVEKAFQKQPTIFQGVRRVLTKKGKKTKSHYYKNVGLGFKTPKEAIEGGYIDKKCPFTGNISIRGRILQGVVKSTKMKRTIVIRRDYLHYVKKYNRFEKRHKNMSVHCSPCFRINEGDVVTVGQCRPLSKTVTFNVLRIERAAAKQAVGSKKQFKGF 180
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: A0A7S2X4E6_PROMC (Hypothetical protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2X4E6_PROMC) HSP 1 Score: 224 bits (570), Expect = 6.170e-72 Identity = 111/161 (68.94%), Postives = 133/161 (82.61%), Query Frame = 1
Query: 55 VDQTEKAFQKQDAVFVGAALRKG-AKKN----LRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVESVPESGAIRSKKAFRVF 522
+DQ EKAFQKQD +F+ + ++ AKKN LRY+++VGLGFKTPQEAI+GTYIDKKCPFTGNVSIRGRILKG+V+S KM RTIV+RRDYL Y+KKY+R+EKRH+N+SAH SP F VKEGD+VTVGQCRPL+KTVRFNVL VE + KK FR+F
Sbjct: 5 LDQNEKAFQKQDGIFLNSRSKRVLAKKNKHGNLRYYKNVGLGFKTPQEAIDGTYIDKKCPFTGNVSIRGRILKGLVISNKMKRTIVLRRDYLHYIKKYKRYEKRHTNISAHISPCFTVKEGDIVTVGQCRPLSKTVRFNVLNVEPCSTQKPVNVKKQFRMF 165
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: A0A6G0WK27_9STRA (Ribosomal_S17_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WK27_9STRA) HSP 1 Score: 224 bits (571), Expect = 6.910e-72 Identity = 111/157 (70.70%), Postives = 128/157 (81.53%), Query Frame = 1
Query: 52 HVDQTEKAFQKQDAVFVGAALRKGAKKNLRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVESVPESGAIRSKKAFRVF 522
H+DQ EKAFQKQ VF+ + G KK R+ SVGLGFKTP+EAIEG YIDKKCPFT +VSIRGRILKGVV+STKM RTI++RRDYL Y+KKY+RFEKRH N++AH SP FRVKEGDVVT+GQCRPLAKTVRFNVL+VE E+ I +K FR F
Sbjct: 23 HIDQNEKAFQKQKGVFLASKKFAGKKKGPRFVVSVGLGFKTPKEAIEGGYIDKKCPFTSDVSIRGRILKGVVLSTKMKRTIIVRRDYLHYIKKYKRFEKRHKNVAAHVSPCFRVKEGDVVTIGQCRPLAKTVRFNVLQVEPASETKPINVRKQFRQF 179
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: A0A024G1T5_9STRA (Ribosomal_S17_N domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G1T5_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.450e-71 Identity = 109/157 (69.43%), Postives = 127/157 (80.89%), Query Frame = 1
Query: 52 HVDQTEKAFQKQDAVFVGAALRKGAKKNLRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVESVPESGAIRSKKAFRVF 522
H+DQTEKAFQKQ+ VF+ + KK R ++ +GLGFKTP+ AIEG YIDKKCPFT NVSIRGRILKGVV+STKM RTI++RRDYL YVKKY+RFEKRH N++AH SP FRVKEGDVVT+GQCRPLAKTVRFNVL+V E+ I +K FR F
Sbjct: 3 HIDQTEKAFQKQEGVFLASKKYANKKKGPRKYKDIGLGFKTPKAAIEGQYIDKKCPFTSNVSIRGRILKGVVLSTKMKRTIIVRRDYLHYVKKYKRFEKRHKNVAAHVSPCFRVKEGDVVTIGQCRPLAKTVRFNVLEVFPASETKPINVRKQFRQF 159
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Match: A0A3R6VI86_9STRA (Ribosomal_S17_N domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A3R6VI86_9STRA) HSP 1 Score: 219 bits (557), Expect = 3.810e-70 Identity = 105/150 (70.00%), Postives = 125/150 (83.33%), Query Frame = 1
Query: 73 AFQKQDAVFVGAALRKGAKKNLRYHRSVGLGFKTPQEAIEGTYIDKKCPFTGNVSIRGRILKGVVVSTKMSRTIVIRRDYLRYVKKYRRFEKRHSNLSAHCSPAFRVKEGDVVTVGQCRPLAKTVRFNVLKVESVPESGAIRSKKAFRVF 522
AFQKQD VF+ + G K R+++S+GLGFKTP+ AIEG Y+DKKCPFTGNVSIRGRILKGVV+S KM RTI++RRDYL Y+KKY+RFEKRH N++AH SPAFRVKEGDVVT+GQCRPLAKTVRFNVL+VE+ E+ I +K FR F
Sbjct: 3 AFQKQDGVFLASKKFAGKKSGPRFYKSIGLGFKTPKTAIEGGYVDKKCPFTGNVSIRGRILKGVVLSNKMKRTIIVRRDYLHYIKKYKRFEKRHKNVAAHVSPAFRVKEGDVVTIGQCRPLAKTVRFNVLEVEAASETKPINVRKQFRQF 152 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10354.505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10354.505.1 >prot_S-firma_F_contig10354.505.1 ID=prot_S-firma_F_contig10354.505.1|Name=mRNA_S-firma_F_contig10354.505.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=163bp MAETAHVDQTEKAFQKQDAVFVGAALRKGAKKNLRYHRSVGLGFKTPQEAback to top mRNA from alignment at S-firma_F_contig10354:3556..4956- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10354.505.1 ID=mRNA_S-firma_F_contig10354.505.1|Name=mRNA_S-firma_F_contig10354.505.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1401bp|location=Sequence derived from alignment at S-firma_F_contig10354:3556..4956- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10354:3556..4956- >mRNA_S-firma_F_contig10354.505.1 ID=mRNA_S-firma_F_contig10354.505.1|Name=mRNA_S-firma_F_contig10354.505.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=978bp|location=Sequence derived from alignment at S-firma_F_contig10354:3556..4956- (Sphaerotrichia firma ET2_F female)back to top |