mRNA_S-firma_F_contig1034.483.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: D7FSM8_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSM8_ECTSI) HSP 1 Score: 462 bits (1190), Expect = 1.370e-150 Identity = 240/392 (61.22%), Postives = 289/392 (73.72%), Query Frame = 2
Query: 104 SWLSAASTNIGGRQRQEDEVVAVPDLNLHVPETAELDRAITRSYFAVFDGHGGPAASSFLAKTFHVALAKNPLLRSDPKAALLDVWKSMDSEIYNILAKRHRENTAR------ANNNTSGXXXXXXGTEEVPFPRDGSTATVLLLVGNKLFAANCGDSSGILVKKDGSVRTITKNHDTLDRDEFERIGQLGGFYRKQMLRMPRRWPWCCLVEDVVVGKPRVYPGGLLVTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEEDWSEVVIASDGVWDVVHTEEMPLLLARLEGKGAAAAALQFSAMNGNHINGINNTNGS-----------------VSAPGATVSDADIRRLRQAQLNGTCAKLILACVRHRYWEMNQSAADNASAVILRF 1210
SW +AAS+NIGGR +QED+VV++P+LN ++P ELDR I RS+FAVFDGHGG AAS+ LAKTFHV LA++PLL SDPKAALLDVW+SMD E+Y LA++HR+N R A + G G + FPRDGSTATVLLLVG KL+AANCGDS+G+LVKKDGSV+TIT +HDTL+ E++RI +LGG YR Q LR PR+WPWCC+V+DVVVGKPRV GLLVTRAFGDFS KL GGTPG+ILPDCEE+LE+TIEEDW+EVVIASDGVWDV+ TEEMP +LA LE K A + + A N N++ G +S S D R+RQAQL GTCAKL+LACVRHRYW ++Q+AADNASAVI+RF
Sbjct: 4 SWQAAASSNIGGRLKQEDKVVSIPNLNAYIPVATELDRGIARSFFAVFDGHGGSAASTCLAKTFHVKLARSPLLASDPKAALLDVWQSMDGEVYRALAQKHRQNNLRPTIIGGAQETSGGASFPSGGASQ--FPRDGSTATVLLLVGKKLYAANCGDSAGVLVKKDGSVQTITNSHDTLNPGEYDRIRKLGGSYRNQTLRSPRKWPWCCVVQDVVVGKPRVC--GLLVTRAFGDFSCKL---GGTPGIILPDCEEILELTIEEDWAEVVIASDGVWDVMQTEEMPQILAMLEEKIPAKVSPRIPAAANKDFNSNNSSGGGTLAALDYAASERYLLGELSEEHIVTSFGDSARVRQAQLQGTCAKLVLACVRHRYWALHQAAADNASAVIVRF 388
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: A0A835Z4T9_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T9_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.050e-46 Identity = 122/329 (37.08%), Postives = 166/329 (50.46%), Query Frame = 2
Query: 116 AASTNIGGRQRQEDEVVAVPDLNLHVPETAELDRAITRSYFAVFDG---------------------------HGGPAASSFLAKTFHVALAKNPLLRSDPKAALLDVWKSMDSEIYNILAK-RHRENTARANNNTSGXXXXXXGTEEVP---------FPRDGSTATVLLLVGNKLFAANCGDSSGILVKKDGS---VRTITKNHDTLDRDEFERIGQLGGFYR-KQMLRMPRRWPWCCLVEDVVVGKPRVYPGGLLVTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEEDWSE-------VVIASDGVWDVVHTEEMPLLLARL 958
A T+IG R QED +V V DLN +P E DR I RS++AVFDG GG S +L++ FH+ALA +PL+ +D KAAL +W ++D + Y L +HR R + + S G FPRDGSTATV ++ GN+ ANCGDS+ LV++ G +++NH TL+ E RI +GG + + R R P CC+ KPRVYPGGLLVTRA+GDF AK LGG PG ++ + + ++ ++ V++ASDGVWD V M L RL
Sbjct: 55 AKFTSIGNRSYQEDRLVTVQDLNQFIPPEVEADRTIRRSFYAVFDGPLVCTARRTYVTLGSQSPCGAAVTGAADGGDKCSQWLSENFHMALASHPLVGTDIKAALQQLWPTLDDKFYEYLETIQHRAAQQRPSMSQSTFNPEDPGVMAAAGPAGEGDWSFPRDGSTATVCVVEGNRAILANCGDSAAALVRRVGMRLVCEPLSENHGTLNSAETARIRSVGGELQVRGRARRVRAPPLCCVPWKSAPRKPRVYPGGLLVTRAYGDFYAKRAPLGGLPGALICGHGRLSRVELDGFGTDGGGGAGVVILASDGVWDAVPVWRMAAALERL 383
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: A0A7S2CP40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP40_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.080e-28 Identity = 74/244 (30.33%), Postives = 117/244 (47.95%), Query Frame = 2
Query: 482 FPRDGSTATVLLLVGNKLFAANCGDSSGILVKKDGSVRTITKNHDTLDRDEFERIGQLGGFYRKQMLRMPRRWPWCCLVEDVVVGKPRVYPGGLLVTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEEDWSEVVIASDGVWDVVHTEEMPLLLARLEGKGAAAAALQFSAMNGNHINGINNTNGSVSAPGATVSDADIRRLRQAQLNGTCAKLILACVRHRYWEMNQSAADNASAVILRFH 1213
F + GSTA V+ +VG+ ++ ANCGDS L ++ ++ +H+T ++ E R+ G ++++R R CC+ E V GK RV+PGGL +TR+FGD+ AKL GG P +L + EE+ +M IE+ W ++IASDG WD + + A FS S++ + +L ++ AC YW + ADN +A+ L F+
Sbjct: 28 FQKSGSTAAVVFIVGDTIYVANCGDSHVYLYREGAPPLRLSDDHNTDNQKECARVRNAGAKVEQELVR---RKIGCCMTEKVPAGKQRVWPGGLAITRSFGDYHAKLTAFGGVPDSVLYEFEELRKMDIEDRWQGLIIASDGAWDALTPD---------------AIWRSFSG----------------------ASNSAVAESEDEKLTVGLQTMVEACCMSEYWTSHGYDADNTTAIALSFN 231
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: A0A7S3XNF1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNF1_HETAK) HSP 1 Score: 112 bits (280), Expect = 3.650e-25 Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 2
Query: 593 RTITKNHDTLDRDEFERIGQLGGFYRKQMLRMPRRWPWCCLVEDVVVGKPRVYPGGLLVTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEEDWSEVVI-ASDGVWDVVHTEEMPLLLARLEGKG 970
R +T +H T + E R+ GG R Q+ + R+P CC + DV GKPR YPGGLLVTRAFGD+ +KL LGG PG ++PD V E+ +E + +++ ASDGVWD + EE+ +L G G
Sbjct: 17 RMLTDDHGTTNEAEVARLRAAGGEVRPQLQKAFGRFPRCCRLVDVPAGKPRAYPGGLLVTRAFGDYHSKLASLGGAPGTVVPDFSAVREVALEAGTAHLLLMASDGVWDALPREELLEILLGGGGDG 143
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: A0A7S3V2N6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V2N6_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.010e-20 Identity = 88/288 (30.56%), Postives = 138/288 (47.92%), Query Frame = 2
Query: 98 MFSWLSAASTNIGGRQRQEDEVVAVPDLNLHVPETAELDRAITRSYFAVFDGHGGPAASSFLAKTFHVALAKN-PLLRSDPKAALLDVWKSMDSEIYNILAKRHRENTARANNNTSGXXXXXXGTEEVPFPRDGSTATVLLLVGNKLFAANCGDSSGILVK-KDGSVRTITKNHDTLDRDEFERIGQLGGFYRKQMLRMPRRWPWCCLVEDVVVGKPRVYPGGLLVTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEEDWSEVVIASDGVWDVVHTEE---MPLL 946
+FSW A G R ED + + N H+ + D I RSYF VFDGHGG F+ KT H+ LA+ R D +A+L + + + + K +N A +TSG +TATV +L G ++F A GDS ++ K+ ++ +++++H + E +RI + GG ++Q G R+YPGGL V+R+FGD +AKL E GG G ++ + EV I ++ + + +DGV D V ++ +PLL
Sbjct: 6 VFSW--GAHQVKGSRNYMEDGYSVIENFNEHIHDNTLHD--IPRSYFGVFDGHGGDGCMHFVKKTLHLELARALEETRGDTEASLKLAFAWTEDK-WMEKVKSSSKNEA----DTSG-----------------TTATVCILEGEEVFCAYLGDSPAFIMHHKNKTLSSMSEDHKPNGKIESKRIKKNGGTVKRQKK-----------------GPHRIYPGGLAVSRSFGDPTAKLAEFGGKVGTLIAE-PEVSRHVINDESHFLFLCTDGVTDNVKNKQDIYLPLL 249
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: A0A0K9PC33_ZOSMR (Protein-serine/threonine phosphatase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PC33_ZOSMR) HSP 1 Score: 97.4 bits (241), Expect = 1.990e-18 Identity = 78/260 (30.00%), Postives = 118/260 (45.38%), Query Frame = 2
Query: 224 TRSYFAVFDGHGGPAASSFLAKTFHVALAKNPLLRSDPKAALLDVWKSMDSEIYNILAKRHRENTARANNNTSGXXXXXXGTEEVPFPRDGSTATVLLLVGNKLFAANCGDSSGILVKKDGSVRTITKNHDTLDRDEFERIGQLGGFYRKQMLRMPRRWPWCCLVEDVVVGKPRVYPGGLL-VTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEEDWSEVVIASDGVWDVVHTEEMPLLLARLEGKGAAAAALQFSA 1000
T F VFDGHGG + ++ L K+P +D K+A++D ++ DSE+ I + ++ GST++ +L+G +L AN GDS + + +DG+ +T++H DE RI GGF W G RV GG+L V+RAFGD KL++ ++ D E+ E I++ ++IASDG+WDVV EE L+ +E AA L A
Sbjct: 57 TVGLFGVFDGHGGARVAEYVKHNLFNNLIKHPKFSTDTKSAIVDAYRHTDSELLKIECNQSKD--------------------------AGSTSSTAILMGRRLLVANVGDSRAV-ISRDGNAIAVTRDHKPNQSDERRRIEAAGGFVM-----------WA--------GTWRV--GGVLAVSRAFGD---KLLKR-----YVIAD-PEIQEEVIDKSLEFLIIASDGLWDVVSNEEAVALIKPIENPENAAKKLMVEA 259
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: A0A8J5FIV5_ZINOF (PPM-type phosphatase domain-containing protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FIV5_ZINOF) HSP 1 Score: 97.8 bits (242), Expect = 2.440e-18 Identity = 85/263 (32.32%), Postives = 123/263 (46.77%), Query Frame = 2
Query: 197 ETAELDRAITRSYFAVFDGHGGPAASSFLAKTFHVALAKNPLLRSDPKAALLDVWKSMDSEIYNILAKRHRENTARANNNTSGXXXXXXGTEEVPFPRDGSTATVLLLVGNKLFAANCGDSSGILVKKDGSVRTITKNHDTLDRDEFERIGQLGGFYRKQMLRMPRRWPWCCLVEDVVVGKPRVYPGGLL-VTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEEDWSEVVIASDGVWDVVHTEEMPLLLARLEGKGAAAA 982
++AE+D + S F +FDGHGGP AS +L + L K+PLL D K A+ + +K DS+ LA NT R DGSTA+ +L+G +LF AN GDS ++ K G ++ +H DE +RI GG W G RV GG+L ++RAFG+ K L E+ E ++E+ +++ASDG+WDVV E+ + L R+E + AAA
Sbjct: 62 KSAEIDGNLI-SLFGIFDGHGGPRASEYLKEHLFNNLTKHPLLMVDTKVAISETFKRTDSD---FLASE--SNTTRD---------------------DGSTASTAVLIGKQLFVANVGDSRAVICKA-GKAIPLSDDHKPNRSDERKRIEDAGGIVM-----------WA--------GTWRV--GGILAMSRAFGNRLLKQFVLAEP---------EIQEQLVDEELEFLILASDGLWDVVPNEDA-VSLVRMEEEPEAAA 265
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: A0E813_PARTE (PPM-type phosphatase domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E813_PARTE) HSP 1 Score: 99.0 bits (245), Expect = 5.040e-18 Identity = 80/277 (28.88%), Postives = 131/277 (47.29%), Query Frame = 2
Query: 116 AASTNIG-GRQRQEDEVVAVPDLNLHVPETAELDRAITRS-YFAVFDGHGGPAASSFLAKTFHVALAKNPLLRSDPKAALLDVWKSMDSEIYNILAKRHRENTARANNNTSGXXXXXXGTEEVPFPRDGSTATVLLLVGNKLFAANCGDSSGILVKKDGSVRTITKNHDTLDRDEFERIGQLGG-FYRKQMLRMPRRWPWCCLVEDVVVGKPRVYPGGLLVTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEEDWSEVVIASDGVWDVVHTEEM 937
AA+T+ G RQ ED V + LNL P + +S +FAV+DGHGGP + F+ H + K ++P+ A+ + S + Y +A ++ + G A L V N + AN GDS + + + G ++IT +H +E +RI + GG Y+ Q+ + L ++ +G RV PG L V+R FGD AKL + GG P VI + ++ ++ I D +++A DG++D + +EE+
Sbjct: 140 AANTHQGLVRQYNEDRVSII--LNLMRPNSNTNQGYWPQSSFFAVYDGHGGPQCADFMRDNLHQYIIKEDCFPNNPRLAI-ERGVSKAEKTYLEMA------------------------DQKVLDKSGCCAVFALFVDNNCYVANIGDSRAV-ISQGGKGKSITVDHKPSTHEEQQRISKFGGQIYQTQLQQ---------LNGEIQLGPHRVLPGRLAVSRTFGDAEAKLTKYGGIPNVISAE-PDIFQLQIT-DQDFLILACDGIYDKMSSEEV 377
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: A0A8J5Y3L2_DIALT (PPM-type phosphatase domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y3L2_DIALT) HSP 1 Score: 97.8 bits (242), Expect = 5.450e-18 Identity = 86/274 (31.39%), Postives = 124/274 (45.26%), Query Frame = 2
Query: 113 SAASTNIGGRQRQEDEVVAVPDLNLHVPETAELDRAITRSYFAVFDGHGGPAASSFLAKTFHVALAKNPLLRSDPKAALLDVWKSMDSEIYNILAKRHRENTARANNNTSGXXXXXXGTEEVPFPRDGSTATVLLLVGNKLFAANCGDSSGILVKKDGSVRTITKNHDTLDRDEFERIGQLGGFYRKQMLRMPRRWPWCCLVEDVVVGKPRVYPGGLLVTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEEDWSEVVIASDGVWDVVHTEE 934
S+ + G R ED V + L + A +DR ++AV+DGHGG A+ A H L K L + P A LLD D+ + + A E ARA G DGSTA +L++GN+LFAAN GDS +L + G+ R +T +H +E RI + GG+ R +V G RV G L V+RAFGD K P ++ P +V + + D V++A DG+WDV+ ++
Sbjct: 14 SSVAAAQGKRPTMEDCHVRIDSLWRLMGSPAGIDRYPRAGFYAVYDGHGGRRAAEVAASMLHSELTKR-LFQLGPDA-LLDEALVRDA-LLDAFAATEAEVVARATARADGQW------------EDGSTACAVLILGNRLFAANLGDSRAVLSRA-GTARALTVDHKPGTEEEERRIHRAGGYVR------------------LVGGIERVM-GDLSVSRAFGDVEYK-------PNIVSP-VPDVSVVPLGADDEFVIVACDGLWDVLSEQD 244
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Match: A0A067CF29_SAPPC (PPM-type phosphatase domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CF29_SAPPC) HSP 1 Score: 95.9 bits (237), Expect = 1.020e-17 Identity = 92/289 (31.83%), Postives = 129/289 (44.64%), Query Frame = 2
Query: 119 ASTNIGGRQRQ-EDEVVAVPDLNLHVPETAELDRAITRSYFAVFDGHGGPAASSFLAKTFHVALAKNPLLRSDPKAALLDVWKSMDSEIYNILAKRHRENTARANNNTSGXXXXXXGTEEVPFPRDGSTATVLLLV---GNK---LFAANCGDSSGILVKKDGSVRTITKNHDTLDRDEFERIGQLGGF------YRKQMLRMPRRWPWCCLVEDV----VVGKP-RVYPGGLLVTRAFGDFSAKLVELGGTPGVILPDCEEVLEMTIEE---DWSEVVIASDGVWDVV 922
A+T++G +R+ EDE V DL L P D A RS FAVFDGHGG A++FL L ++P AL + +D+ LA+RH G DGSTA V++L GN L AN GDS +L+ + ++++ D+ + GGF YR +P WC + D +VG+P RVYPGG++ T+ GD K V GV+ + E T+ E + VV+ASDG+W VV
Sbjct: 13 ATTDVGNTRRENEDEFCVVLDLPLRTPH----DNACRRSLFAVFDGHGGVRAATFLKTHLVSYLVQDPQYGQSTSDALASTLRRLDAAFLE-LARRH-----------GGAI-------------DGSTAIVVVLEQYHGNASPTLICANLGDSRAVLISRH-HWELLSRDQTASRVDQQPLVYDNGGFVAFRNTYRPPTSELPLWRRWCREIYDAWQARIVGRPLRVYPGGVVCTQVIGDLDCKQV------GVV----RAIAECTVVELHPAHTMVVLASDGLWAVV 261 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1034.483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1034.483.1 >prot_S-firma_F_contig1034.483.1 ID=prot_S-firma_F_contig1034.483.1|Name=mRNA_S-firma_F_contig1034.483.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=401bp MFSWLSAASTNIGGRQRQEDEVVAVPDLNLHVPETAELDRAITRSYFAVFback to top mRNA from alignment at S-firma_F_contig1034:6083..12340+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1034.483.1 ID=mRNA_S-firma_F_contig1034.483.1|Name=mRNA_S-firma_F_contig1034.483.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6258bp|location=Sequence derived from alignment at S-firma_F_contig1034:6083..12340+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1034:6083..12340+ >mRNA_S-firma_F_contig1034.483.1 ID=mRNA_S-firma_F_contig1034.483.1|Name=mRNA_S-firma_F_contig1034.483.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2406bp|location=Sequence derived from alignment at S-firma_F_contig1034:6083..12340+ (Sphaerotrichia firma ET2_F female)back to top |