mRNA_S-firma_F_contig10306.455.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: A0A8J5XHL4_DIALT (GPS domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHL4_DIALT) HSP 1 Score: 72.8 bits (177), Expect = 9.750e-13 Identity = 43/87 (49.43%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 46 PSVTLRANSLSPGETYTFRLSATSAD-AQVGSASTSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAGGWSDDAEDLPLLYQFGYIAV 303
PS+ R +L PG YTF L+ T D A VGS S ++N P GG +A P+ G LST FE+ A GW+D+ EDLPL Y FGY A
Sbjct: 2380 PSLGFRTGALRPGALYTFELTVTGGDVAAVGSVSA--LMNRPPFGGVLAVAPSAGEALSTVFELRADGWTDELEDLPLEYSFGYAAA 2464
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: A0A7S1GR23_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GR23_HEMAN) HSP 1 Score: 69.3 bits (168), Expect = 1.280e-11 Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 25 FASVLTLPSVTLRANSLSPGETYTFRLSATSADAQVGSAS---TSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAGGWSDDAEDLPLLYQFGYIAV 303
++ LT S+ +RA+ L+PG +YTFRL+AT +GS S SF N P GG + +P G LST + +SA GW+DD EDLPL Y F + +
Sbjct: 167 LSTTLTGTSIVIRADKLTPGISYTFRLTAT----YLGSESWGEVSFKTNQPPLGGSFSVYPMNGTSLSTSYTLSALGWTDDTEDLPLSYLFSHSSA 258
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: A0A5A8C2U3_CAFRO (GPS domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C2U3_CAFRO) HSP 1 Score: 65.9 bits (159), Expect = 2.620e-10 Identity = 41/95 (43.16%), Postives = 51/95 (53.68%), Query Frame = 1
Query: 25 FASVLTLPSVTLRANSLSPGETYTFRLSATSADAQVGSASTSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAGGWSDDAEDLPLLYQFG-YIAVP 306
FA+ + VTL L G + F+L+ T A Q GSA+ N P GFV A P G L+T F + A W+D+AEDLPL Y FG Y A P
Sbjct: 338 FATSTSAARVTLSPGVLPEGASLVFKLTVTDATGQAGSATVQLRTNEPPYAGFVQASPEAGTVLATSFTLQASQWTDNAEDLPLSYLFGFYRATP 432
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: A0A7S3HB63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HB63_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 4.840e-10 Identity = 43/93 (46.24%), Postives = 49/93 (52.69%), Query Frame = 1
Query: 25 FASVLTLPSVTLRANSLSPGETYTFRLSAT---SADAQVGSASTSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAGGWSDDAEDLPLLYQFGY 294
FA L +P N+ PG T TFRL A + + + VN APSGG V PT G LST F VS GW+DDAED PL YQF Y
Sbjct: 1105 FAYSLLVPG-----NTFVPGSTVTFRLRANFGGDINRYAAYSEVNIKVNAAPSGGSVDVTPTSGSALSTSFVVSTAGWTDDAEDFPLSYQFQY 1192
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: A0A5A8DPK7_CAFRO (GPS domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DPK7_CAFRO) HSP 1 Score: 65.1 bits (157), Expect = 4.930e-10 Identity = 38/90 (42.22%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 25 FASVLTLPSVTLRANSLSPGETYTFRLSATSADAQVGSASTSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAGGWSDDAEDLPLLYQFGY 294
FA+ + VTL L G + F+L+ T A Q GSA+ N P GFV A P G L+T F + A W+D+AEDLPL Y FG+
Sbjct: 2218 FATSTSAARVTLSPGVLPEGASLVFKLTVTDATGQAGSATVQLRTNEPPYAGFVQASPEAGTVLATSFTLQASQWTDNAEDLPLSYLFGF 2307
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: A0A7S3HG79_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG79_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.710e-9 Identity = 37/75 (49.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 79 PGETYTFRLSATSA---DAQVGSASTSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAGGWSDDAEDLPLLYQFGY 294
PG + TFRL A A + + + VN APSGG V P G LSTPF +S GW+DDAED PL YQF Y
Sbjct: 70 PGSSVTFRLKANFAGDNNLYAAFSEINIKVNAAPSGGSVDVNPPSGSALSTPFVLSTAGWTDDAEDFPLSYQFQY 144
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: A0A7D9LCW6_PARCT (REJ domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LCW6_PARCT) HSP 1 Score: 62.8 bits (151), Expect = 3.070e-9 Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 1
Query: 28 ASVLTLPSVTLRANSLSPGETYTFRLSATSADAQVGSASTSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAG-GWSDDAEDLPLLYQFGYIAVPEGD 315
A V+ PS+ + N L G TY F+L+A +D+ A N APS G + P G +T F ++A GW DDA+DLP++YQFGY G+
Sbjct: 800 AKVVASPSLVIAKNKLEDGVTYKFKLTAEHSDSS-SFADIEITTNAAPSQGTLEIEPASGFFGNTTFTITAAEGWDDDADDLPMMYQFGYYIQDSGE 895
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: A0A7S1GCK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCK9_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.270e-9 Identity = 39/97 (40.21%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 7 GVADD-PFASVLTLPSVTLRANSLSPGETYTFRLSATSADAQVGSASTSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAGGWSDDAEDLPLLYQFGY 294
GV +D F S + AN PG TYTFRL TS D + ++N PS G++A P G+ + F++SA W+DDA+DLPL+Y+F Y
Sbjct: 403 GVTNDIAFVSPANRMLIKTAANIFVPGATYTFRLD-TSDDNGQSFSELEVLINEPPSSGYIAVEPQSGIAAVSNFQISAELWTDDADDLPLVYRFSY 498
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: F0Y8X7_AURAN (REJ domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8X7_AURAN) HSP 1 Score: 62.4 bits (150), Expect = 4.310e-9 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 49 SVTLRANSLSPGETYTFRLSATSADAQVGSASTSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAGGWSDDAEDLPLLYQFG 291
S+ L A +L+PG +Y F L + G+A+ N P G +AA P+ GV L+TPF +A GW+DDA DLPL Y FG
Sbjct: 821 SLALAAGALAPGASYAFTLRS-----GAGAATVRITTNAPPFAGTLAASPSAGVALATPFFFAARGWTDDAGDLPLSYGFG 896
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 1.080e-8 Identity = 35/91 (38.46%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 25 FASVLTLPSVTLRANSLSPGETYTFRLSATSADAQVGSASTSFVVNVAPSGGFVAAFPTVGVQLSTPFEVSAGGWSDDAEDLPLLYQFGYI 297
F++ + ++ +R +L G+ Y+F LSAT A VG A SF N PSGG + + P + GW+DD +DLPL Y FGYI
Sbjct: 364 FSTPVNARTLIIRKGALGAGQVYSFSLSATDASGLVGYAEFSFETNAPPSGGHLKSDRLSATAGVNPVVLQTLGWTDDIDDLPLTYSFGYI 454 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10306.455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10306.455.1 >prot_S-firma_F_contig10306.455.1 ID=prot_S-firma_F_contig10306.455.1|Name=mRNA_S-firma_F_contig10306.455.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=105bp VSGVADDPFASVLTLPSVTLRANSLSPGETYTFRLSATSADAQVGSASTSback to top mRNA from alignment at S-firma_F_contig10306:2630..2944- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10306.455.1 ID=mRNA_S-firma_F_contig10306.455.1|Name=mRNA_S-firma_F_contig10306.455.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=315bp|location=Sequence derived from alignment at S-firma_F_contig10306:2630..2944- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10306:2630..2944- >mRNA_S-firma_F_contig10306.455.1 ID=mRNA_S-firma_F_contig10306.455.1|Name=mRNA_S-firma_F_contig10306.455.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=630bp|location=Sequence derived from alignment at S-firma_F_contig10306:2630..2944- (Sphaerotrichia firma ET2_F female)back to top |