mRNA_S-firma_F_contig1027.402.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: A0A6H5JXI4_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXI4_9PHAE) HSP 1 Score: 608 bits (1568), Expect = 3.240e-217 Identity = 284/334 (85.03%), Postives = 305/334 (91.32%), Query Frame = 1
Query: 151 MPPCQGVTRDA-DDAAVSRTSENKDQVVNLSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYPQYVAGNWPLTFLWWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWTKLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFWSRREQVQCAVSTASVLAFVYFLVAVALDFDWSAVVVRHAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYR 1149
MPP A DD+ S T NKD V+L LRKQ+P+ECF KSLPRSLFYMARDMGC+LAL +LYP YVAG+WPLTFLWWNA GFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGK+QFEQEVKP+TKLFLK+P HPFTSY FTYLLAGWYDGSHFNPFSVLFWSR+EQVQCAVSTASVL F+Y LV+V DFDWSA+VVRH VPV+IMNYWLVMVTYLQHHEEDT TFD++DFHFATAAMETVDRK+GWGIDDAHHNITDGHVAHHLFFTKIPHYNL+KATAAIRP+LEKLG+YR
Sbjct: 1 MPPRSDTAIGANDDSTSSITRPNKDVRVDLMALRKQVPEECFIKSLPRSLFYMARDMGCVLALQYLYPIYVAGSWPLTFLWWNANGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKQQFEQEVKPFTKLFLKTPFHPFTSYLFTYLLAGWYDGSHFNPFSVLFWSRKEQVQCAVSTASVLTFIYLLVSVLFDFDWSAIVVRHLVPVMIMNYWLVMVTYLQHHEEDTKTFDNSDFHFATAAMETVDRKFGWGIDDAHHNITDGHVAHHLFFTKIPHYNLQKATAAIRPSLEKLGLYR 334
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: A0A835YPJ0_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ0_9STRA) HSP 1 Score: 441 bits (1134), Expect = 2.090e-151 Identity = 200/307 (65.15%), Postives = 239/307 (77.85%), Query Frame = 1
Query: 229 VNLSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYPQYVAGNWPLTFLWWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWTKLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFWSRREQVQCAVSTASVLAFVYFLVAVALDFDWSAVVVRHAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYR 1149
+ + L++ IP ECF KSL +SLFYM RDMG + AL YP YV GNWPLTF+WWNA GFM+WALFV+GHDCGHTTFS Y WVNA+ GHLCHAPLLVPFWPWA+SH++HH YHNHVEKD S+PWF KEQ+ ++ + LK+PLHP SY +YL G++DGSHFNPF LF +R ++VQCAVS+ +V F+ + +++ WSA V++A P I NYWLVMVTYLQHHE D+ T+DD D+ FA AAMETVDRKY WG+DD HHNITDGHV HHLFFTKIPHYNL KAT A+RP LE LGVYR
Sbjct: 29 LRMDVLKRIIPDECFHKSLVKSLFYMVRDMGLICALWKAYPVYVEGNWPLTFVWWNAMGFMMWALFVVGHDCGHTTFSEYTWVNAVCGHLCHAPLLVPFWPWAQSHHQHHSYHNHVEKDHSFPWFRKEQYATQLSGVGRTILKTPLHPLFSYGVSYLFFGYWDGSHFNPFGSLFKNRTQRVQCAVSSLAVALFLGLFLHYVIEYSWSAFAVKYAAPWCIYNYWLVMVTYLQHHEPDSITYDDADYSFAVAAMETVDRKYCWGVDDLHHNITDGHVVHHLFFTKIPHYNLMKATDALRPYLEGLGVYR 335
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: A0A1S7C7R3_9STRA (Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7R3_9STRA) HSP 1 Score: 342 bits (878), Expect = 4.020e-112 Identity = 163/309 (52.75%), Postives = 214/309 (69.26%), Query Frame = 1
Query: 235 LSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYPQYVAG-NWPLTFLWWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWTKLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFWSRREQVQCAVSTASVL---AFVYFLVAVALDFDWSAVVVRHAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYR 1149
LSQ++K IP++CF+KSL RS +YM RD L AL+ +YP A P F+WWN GF +W LFVIGHDCGH +FS Y W+N + GH+CHAPL+VP+WPW KSH HH YHNH+ KDMS+PW KE FE ++ P+ + L++PL F Y F YL AG DGSH PFS LF +E+VQCAVST ++ A VY + + + + + VP+L+ N W+ MVTYLQHH+EDT + + ++++ A+ET+DR+YG GIDD HNITDGHVAHHLFFT+IPHY+L ATAA+R L+ G Y+
Sbjct: 9 LSQIKKAIPEKCFQKSLLRSFYYMLRDFAALAALYFVYPTVQAKYGLPGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWLNDICGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTKEVFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKMDGSHVVPFSPLFTDTKERVQCAVSTLGMVVAGALVYIGLEGGKEGGMARIGSIYVVPLLVFNAWITMVTYLQHHDEDTKVYAEGEWNYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLTAATAAVRQCLQPTGTYK 316
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: I2CR09_NANGC (Glycerolipid omega-3 fatty acid desaturase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR09_NANGC) HSP 1 Score: 340 bits (872), Expect = 1.430e-110 Identity = 173/359 (48.19%), Postives = 230/359 (64.07%), Query Frame = 1
Query: 94 PGLLCWPVASGEKRREAHAMPPC-QGVTRDADDAAVSRTSENKDQVVNLSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYPQYVAGNWPLT--FLWWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWTKLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFWSRREQVQCAVSTASVLAFVYFLVAVALDFDWSAVVVR----HAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYR 1149
P +PV GE + PP + A S+ + + + LSQL+K IP++CF+KSL RS++YM RD L AL+ +YP V N+ L F+WWN GF +W LFVIGHDCGH +FS Y W N + GH+CHAPL+VP+WPW KSH HH YHNH+ KDMS+PW +E FE ++ P+ + L++PL F Y F YL AG DGSH P S LF +E++QCAVST +L L+ V L+ + R + +P+L+ N W+ MVTYLQHH+EDT + + ++ + A+ET+DR+YG GIDD HNITDGHVAHHLFFT+IPHY+LK ATAA+R L G Y+
Sbjct: 11 PRKTAYPVTGGELSISERSKPPIVHSLQHVLGSAGFSKGTMVEQTLPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPS-VQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE-DLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSDTKERIQCAVSTLCMLV-AGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTKVYAEGEWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYK 366
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: A0A7S4PZI0_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4PZI0_9DINO) HSP 1 Score: 334 bits (856), Expect = 3.900e-109 Identity = 158/307 (51.47%), Postives = 212/307 (69.06%), Query Frame = 1
Query: 223 QVVNLSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYPQYVAGNWPLTFLWWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWTKLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFWSRREQVQCAVSTASVLAFVYFLVAVALDFD-WSAVVVRHAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLG 1140
Q+ ++ +LR IP CF KSLPRSLFYM RD + + Y + A W F++WN GF +W LFV+GHDCGHT+FSNY W+N L GH+CHAPL+VP+WPW +SH+ HH YHNH +KD S+PW ++ + Q + ++ PL F Y + YLLAG DGSHF+PFS LF + +++VQCAVS+ SV+A F V + FD W + P+ N WLV+VTYLQHH+++T +D+ ++++ A ETVDR YG+GIDD HHNITDGHV HH+FFT+IPHY+LK+ATAAI P ++K G
Sbjct: 43 QLPSMKELRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQ-LNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQCAVSSLSVVA---FSVGMYFYFDSWGQWFSMYFGPLCFFNMWLVLVTYLQHHDDETLAYDEGEWNYLRGAFETVDRTYGFGIDDIHHNITDGHVLHHIFFTQIPHYHLKEATAAIVPVIQKYG 345
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: A0A6V1NJB0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NJB0_HETAK) HSP 1 Score: 307 bits (787), Expect = 5.170e-99 Identity = 151/307 (49.19%), Postives = 203/307 (66.12%), Query Frame = 1
Query: 223 QVVNLSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYPQYVAGNWPLTFLWWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWTKLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFWSRREQVQCAVSTASVLAFVYFLVAVALDFD-WSAVVVRHAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLG 1140
Q+ +L +LR IP CF KSLPRSLFYM RD+ + + Y + A W F++WN TGF +W LFV+GHDCGHT+FSNY W+N L GH+C+APLLVP+WPW +SH+ HH YHNH EKD PW KEQ ++ ++ PL+ F Y + YLLAG DGSH +PFS LF + ++++QCAVS+ SV A F V + FD WS + + P+ N WL + L H E+ T +D+ ++++ A +T+DR YG+GID+ HHN TD HV HH+FF KIPHY+LK+ATAAI P ++K G
Sbjct: 23 QLPSLKELRAAIPSHCFVKSLPRSLFYMFRDLVAICLCVYFYDTFKALGWSGLFIYWNLTGFSMWCLFVVGHDCGHTSFSNYGWLNDLCGHICNAPLLVPYWPWKRSHHLHHSYHNHTEKDKGRPWI-KEQEWAQLNAIQTAAMECPLYAFFGYTWIYLLAGIRDGSHLSPFSKLFETMQQRIQCAVSSLSVAA---FSVGMYFYFDSWSQWFLMYFGPLCFFNMWLALTDCLSHREDQTLAYDEGEWNYLRGAFQTIDRTYGFGIDNIHHNSTDCHVLHHIFF-KIPHYHLKEATAAIVPVIKKYG 324
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: A0A7R9YMG6_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YMG6_DIALT) HSP 1 Score: 303 bits (775), Expect = 2.840e-97 Identity = 152/310 (49.03%), Postives = 202/310 (65.16%), Query Frame = 1
Query: 229 VNLSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYPQYVAGNWPLTFL-WWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWTKLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFW--SRREQVQCAVSTASVLAFVYFLVAVALDFDWSAVVVRHAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYR 1149
+ L +RK IP+ECF K RSL+++ARD+ L +YP A PL +L +WN GF +WALFV+GHDCGHTTFSN +N + GH+ HAPLLVP++PWA SH HH YHNH +KD S+PWF K + + +T+ FLKSPL PF +Y YL G +DGSH P S L+ S R +++CAVSTA+VLAF A W+ + + + +WL MVTY QHH+ T +DD D+ + A++T+DR YG+G+D HHNI+DGHV HHLFFT++PHY+L KAT + P L K GVY+
Sbjct: 24 MTLQDIRKVIPQECFVKDTGRSLWFLARDLAVLATAPLVYPHVAASANPLLYLAYWNFYGFFMWALFVVGHDCGHTTFSNSKLLNDVCGHIAHAPLLVPYYPWAMSHRRHHMYHNHQKKDASHPWFTKASMPK-LPAFTRSFLKSPLAPFLAYPI-YLFEGSFDGSHVFPLSKLYRGASTRAKLECAVSTATVLAF--GAAAKLACGSWATLALAYGGCYACFTFWLFMVTYFQHHDHGTLVYDDADWSYLKGALQTIDRTYGFGLDSLHHNISDGHVVHHLFFTQVPHYHLTKATEHVAPFLAKAGVYK 329
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: A0A811KVY1_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KVY1_9BILA) HSP 1 Score: 292 bits (747), Expect = 9.700e-93 Identity = 142/310 (45.81%), Postives = 199/310 (64.19%), Query Frame = 1
Query: 235 LSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYP---QYVAGNWPLTFLWWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWT-KLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFWSRREQVQCAVSTASVLAFVYFLVAVALDFDWSAVVVRHAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKL-GVYR 1149
L +LRK IP ECFEK +S+F++ D + L++ P QY G WP +W+ G ++LFV+GHDCGH TFS Y W+N ++GH+ HAP+L P+WPW KSH +HH+Y +H+EKD +PW+ +E++ QE PW + F K PL F + F YL G DGSH+ P+S LF + ++V+CAVST+ +A Y + D+ +S V + PVL WLVMVTYLQH +E+ ++D ++ F +T+DR YG ID H+ITDGHVAHHLFFTKIPHY+L +AT I+ +K G+Y+
Sbjct: 36 LEELRKAIPPECFEKDWRKSMFFLVWDYAVIAGLYYALPYIEQY--GGWPGLLVWYYVVGMFGFSLFVVGHDCGHGTFSEYTWLNDIIGHVAHAPILAPYWPWQKSHRQHHQYTSHLEKDKGHPWYTQEEYVQE--PWVIQQFFKFPLSAFVRWNFVYLTLGLPDGSHYWPYSKLFKTTEDRVKCAVSTSLCIASAYVAFVIC-DYSFSTYVKYYLAPVLFQGLWLVMVTYLQHQDEEIEVYEDAEWSFVRGQTQTIDRTYGMFIDTLMHHITDGHVAHHLFFTKIPHYHLIEATEGIKKVFKKYPGLYK 340
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: A0A4D9DBT0_9STRA (FA_desaturase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBT0_9STRA) HSP 1 Score: 288 bits (737), Expect = 1.770e-91 Identity = 147/311 (47.27%), Postives = 194/311 (62.38%), Query Frame = 1
Query: 235 LSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYPQYVAGNWPLT--FLWWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWTKLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFWSRREQVQCAVSTASVLAFVYFLVAVALDFDWSAVVVR----HAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYR 1149
LSQL+K IP++CF+KSL RS++YM RD L AL+ +YP V N+ L F+WWN GF +W LFVIGHDCGH +FS Y W N + GH+CHAPL+VP+WPW K ++ P+ + L++PL F Y F YL AG DGSH P S LF +E++QCAVST +L L+ V L+ + R + +P+L+ N W+ MVTYLQHH+EDT + + ++ + A+ET+DR+YG GIDD HNITDGHVAHHLFFT+IPHY+LK ATAA+R L G Y+
Sbjct: 9 LSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPS-VQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQK----------------------------DLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSGTKERIQCAVSTLCMLV-AGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTKVYAEGEWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYK 289
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Match: A0A507E9I1_9FUNG (FA_desaturase domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E9I1_9FUNG) HSP 1 Score: 281 bits (720), Expect = 1.120e-88 Identity = 156/340 (45.88%), Postives = 195/340 (57.35%), Query Frame = 1
Query: 139 EAHAMPPCQGVTRDADDAAVSRTSENKDQVVNLSQLRKQIPKECFEKSLPRSLFYMARDMGCLLALHHLYPQYVAG------NWPLTFLWWNATGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKEQFEQEVKPWTKLFLKSPLHPFTSYFFTYLLAGWYDGSHFNPFSVLFWSRREQVQCAVSTASVLAFVYFLVAVALDF-DWSAVVVRHAVPVLIMNYWLVMVTYLQHHEEDTNTFDDTDFHFATAAMETVDRKYGWGI-DDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEK 1134
E H P G A V+R + VN+ LRK +P FEKSL S+ Y D L L + Y Y+ G W +W N GF +W+ FV+GHDCGH +FS+ +NA+VGHL H LLVP+WPWA+SH +HH YHNH +KDMS+ W E K PL +Y F YLLAGW DGSHF P+ LF + RE+VQC +ST VLA +LVA+ WSA V VP I N WL +VTYLQHH DT + + ++ F T A++TVDR YG+G+ D HNITDGHV HHLF+T IPHY L AT A+ +L K
Sbjct: 3 ERHTPLPPGGPKAPVSAATVAREANLPGSDVNIGALRKSLPAHVFEKSLAHSMAYFVWDSAVLAGLFYGYKAYLHGVSWGATEWAAYVVWANVVGFFMWSFFVVGHDCGHGSFSDNKTINAVVGHLSHGFLLVPYWPWARSHAQHHAYHNHKDKDMSHVW----STPAEESTGAKFLKDQPLLVPFAYTFGYLLAGWTDGSHFVPWGKLFRNNRERVQCVISTGVVLA---YLVAIRYAAGSWSAFSVGFVVPWSIYNTWLYVVTYLQHHTADTQVYSNENWTFTTGAVQTVDRVYGFGLLDKLMHNITDGHVVHHLFYTSIPHYRLMDATPAVAESLGK 335 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1027.402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1027.402.1 >prot_S-firma_F_contig1027.402.1 ID=prot_S-firma_F_contig1027.402.1|Name=mRNA_S-firma_F_contig1027.402.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=384bp PCKTKSNSKQRYQPRALAAYFSLLRLCGGSLPGLLCWPVASGEKRREAHAback to top mRNA from alignment at S-firma_F_contig1027:1447..6056- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1027.402.1 ID=mRNA_S-firma_F_contig1027.402.1|Name=mRNA_S-firma_F_contig1027.402.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4610bp|location=Sequence derived from alignment at S-firma_F_contig1027:1447..6056- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1027:1447..6056- >mRNA_S-firma_F_contig1027.402.1 ID=mRNA_S-firma_F_contig1027.402.1|Name=mRNA_S-firma_F_contig1027.402.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2304bp|location=Sequence derived from alignment at S-firma_F_contig1027:1447..6056- (Sphaerotrichia firma ET2_F female)back to top |