mRNA_S-firma_F_contig1026.393.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: D7G398_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G398_ECTSI) HSP 1 Score: 1119 bits (2895), Expect = 0.000e+0 Identity = 709/1561 (45.42%), Postives = 899/1561 (57.59%), Query Frame = 1
Query: 406 LVFNKIFLYNVGGGTIVLSQTVSPTSSQGTYDDSFFITITKDSTSIYLQNNSKDAVVLKKATYDDITGVFTLDSTSADVTSNWRVDFAMAHPDGSTLYVGRQFDGRLGQYTRDAMDGSLSEDCPTDVDEANDVFNSMLVAPDGMNVFYAAGAFVKGYRTHTVIPHTPSPTEIPTPSPVMPTQAVTPAPTGDSSSTYFPEEHLLPALISAELSDTDSSFVLSFNRTCYCTSSDFRMMLSSSFPPALCGQDHQTREFDNGCAIESLLDANTMYFFGENTTACQWSDDSSQAVVTFNEALVTTWDPAPNITLTGRYIYGLANSSSTVQPTLFAEGTVELMLRQPAPELVEARFSDDGASVMISFSPDGSASSGLLNASDPGSGSGPGSCDALLDVSTVAVMGNGAECEWTGKRELTVWMGFDSVVEAHSGSTT--------CSGDESCIILLEGGIRTEAFAVLSSSGSTPILAPHQPQAVSAVLVAPQEVGLCGEFALDGRASSGSSSRTLSAAWNVSS--AAGGSAVTAVKQALAPFQGFLRATLNATALEIGLEFSFTLTVSNFLGAVDETTVTVTRMNDDVPTVAIVGPAAKAVKRSRLTSLKMTASPPACEEASSLTYAWSESGVGGYNELGIA-FQDLPGSDPTTLPIPPYALGNPGSSYHFKASSSSRSSTTSASAYVEVTVVQGDLRAFISDGQSRQHTVGADLVLDGSGSSDDDDIPESEFPLTYKWTCSQNCSGVAREYTSSEETVFVIPGGSLQAGLVYEYSLNVTKGTADSAVVYGLIRSDIATVKIEVVSFEAPEVIVTASDGGVKLDPTRKIVIYGGVVEPSGGEVEPSSSLLWTQTQGDLDMQAEDWSVFFSSLRTGTNLVIRPNILTGGSTYTFRLSAVHIVSLATG--------------------------FAELSISANAAPTGGYIDVTPRMGVAALDTFSLECLSWSDDVDDLPLTFSF---STMDESGAQHAVSASKTQSPEWRGPLPIGRAIDNYTLSIIGHVSDSYGATATSLTDAHGESVTVRVTGWEPSPNGSSLLDTLVEAYTVAAEVVQHNPGEPTSTVRAFASLLMDEINSTS---PGETSQYQA--------CHA----------TLVGVMINTAVADFGVLDYSPTSAAAVLDTLALLSSNRNALGTASQEALLGGSSSILDFAVEDGYWDSTISKPMLQLLDGVIGAYSSDSSVVGSEEMGDDAAKNISRIVESMTLLMEAVMVDGEEVGTIESDYVEASCFITSNTDRMSFATGSSTVTFDAGAIAT--SPGSARRRTTALEGPRDPGGCKSGGCASQRRQV---LNRRLDEQLSTSSSTIVVAQLEFGVNTRPSNIVEAGVTQIKLTSTSSGEDVPLAAPVTMTMRASVASTKKVPSCSYYSEETGLWDSSGLVIDSVQELSVGEDGEVYVQVSCSTLHLSDFTVTTTEVEPVFQPVTLTAGTEIFRSFQVSALGLVLTATVIFGMMAIWGVSRIADRRAKMAEKLEVKVVDWYIATGEPKRRPTLPDLLGTNSVEVVERKRKRKNESRT 4890
+V+ ++ Y VG TI +SQTV +DS F+ IT DS S+YL +N + AT + T F L S T+ W DF HPDG+ LY G++ +G++ A G VK YRTHT P TPSP D+S T E P L AELS T+S FV+SFNRTCYCT+ D LS FPPALCGQD +T FD C ++SLLD +T FFGENTT CQWS+ S +AVV FNE+ V WDPAPNITL G YIYG N S +P +FA GTV L LRQ APEL EA F+ DG+S+++SFS GSASSGL++ +D SGS G+CDAL +T+ +G+GA CEWT RELTV++G D+ V A S T C+ DESCI+L +GG+R EAFAVLSS GS P+L P P VSAVLVAPQ VGLCGEF+LDGR SSG++SR+L+A WNVS+ A+ +AVTAV AL PFQG L AT+N+T+LE +EF +L V NFLG+VD VTVTR+N+D P+V +VGPAAK RSR TSL+M A+PPAC +ASSL++ W+ESG+ GY+ LG + ++L G+DPT L IP Y L PGS+Y F A+ SS T ++ A VE+ V QG LRA IS GQ RQHTVGADLVLDGS S D+DD+PE EFPL Y W+CS+NCSGVA YT S+E +F IP GSL+AGLVYE+SLN++KGTA+S VVYG+ RSD A V+++V GDLD+ DWS F+S +TG LV+RP +LTGGS+YTFRLSAV S TG FAE+ NA P+GGY++ TPR GVAA+D FSLE L W DD++DLPL SF + DE+G + ++S + +S EW GPLP+G A DNYT++II W S +G SL+D Y A V + PGE TS VRAFASLL+ EIN+++ P E ++Q H+ T V MI+ V + VLDYS T A A+LDT+ +LSS+ AL T SQ S+ LLMEA M DGE V TIES+YV+ASC +TS+T +SF TG+S+V+F+ G IA+ SP + RR T ++G CKSG CA R++ +RRL+ STS+ST+VV F N RPS +V GVTQIK++STS GED+ LA PV +TMRAS+ S+ ++PSCSYY+E+TGLWDS GL I +V L+ D V V VSC T HLSDF V TTEVEPVFQPVTL AG + + +++ GLVLT + + +W VSRIAD R+K AE+L+ + D YI TG P+R PTL D+ + K +RK T
Sbjct: 1 MVYQTLYSYYVGDETIEISQTVM---GDAAIEDSEFMEITPDSESVYLASNGNSGLTYTDATVNVSTSQFFLGSIFTAETT-WATDFVAVHPDGTRLYAGKKSNGKV-----------------------------------------ARGISVKAYRTHTETPITPSPXXX---XXXXXXXXXXXXXXXDASQTGDSNEISPPELTYAELSGTESLFVISFNRTCYCTAGDGASELS--FPPALCGQDFETAVFDQRCNVKSLLDESTREFFGENTTICQWSNGSREAVVRFNESSVVVWDPAPNITLAGGYIYGQQNLSLYEEPAVFASGTVTLGLRQAAPELSEATFTSDGSSIVVSFSATGSASSGLVDPNDTESGS-AGACDALFRSTTLLAIGHGAICEWTSHRELTVFLGSDASVVAESSDATTTMVSTSSCTTDESCIVLKDGGVRAEAFAVLSSEGSVPVLPPDNPSTVSAVLVAPQWVGLCGEFSLDGRMSSGAASRSLAAVWNVSTTLASDSAAVTAVAGALKPFQGSLYATVNSTSLEPLVEFKISLIVENFLGSVDAAAVTVTRVNEDAPSVVVVGPAAKTAIRSRPTSLRMAATPPACGDASSLSFTWTESGMDGYDALGTSVMENLVGNDPTALTIPAYTLSYPGSTYRFVATVSS--GTLTSGAVVEIIVGQGALRAAISGGQYRQHTVGADLVLDGSESLDEDDVPEEEFPLRYSWSCSENCSGVADGYTGSDEAIFTIPSGSLEAGLVYEFSLNISKGTAESDVVYGVFRSDSAAVQVQV--------------------------------------------------NGDLDLATADWSDLFTSTQTGAILVVRPFVLTGGSSYTFRLSAVDTASGETGTQSRRCTGLSRRSTVRSSAVHRNAGGFAEIHFDVNAPPSGGYVEATPRAGVAAIDMFSLEALLWEDDIEDLPLKVSFFYVAGQDETGTRRSLSLYEVESVEWNGPLPVGSAADNYTMTIIA---------------------------WAASSSGLSLMD----EYAAVASVTEDIPGETTSIVRAFASLLIVEINNSAAATPTEEQEFQVWATRERYDVHSYPLSSRMHGMTFVATMIDATVRESTVLDYSTTMAGAILDTMVVLSSSEKALNTDSQ----------------------------------------------------------------SIVLLMEAGMEDGEGVMTIESEYVQASCLVTSSTGSLSFDTGTSSVSFEDGVIASPSSPSTRRRMTPEIDGGLK---CKSGRCARSTRRMPKSSSRRLNSVSSTSTSTVVVTNQLFNANDRPSALVNGGVTQIKVSSTSDGEDIALAGPVQLTMRASMTSSAQLPSCSYYNEDTGLWDSEGLAIGAVAVLTDAADSAVDVLVSCVTFHLSDFGVATTEVEPVFQPVTLGAGLSVVKGREITVWGLVLTVGALILLGVVWSVSRIADHRSKTAERLQTRAYDHYIETGHPQRLPTLEDIKDLKQTLEKKHKTRRKKRDAT 1360
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI) HSP 1 Score: 967 bits (2500), Expect = 0.000e+0 Identity = 595/1284 (46.34%), Postives = 811/1284 (63.16%), Query Frame = 1
Query: 1021 LISAELSDTDSSFVLSFNRTCYCTSSDFRMMLSSSFPPALCGQDHQTREFDNGCAIESLLDANTMYFFGENTTACQWSDDSSQAVVTFNEALVTTWDPAPNITLTGRYIYGLANSSSTVQPTLFAEGTVELMLRQPAPELVEARFSDDGASVMISFSPDGSASSGLLNASDPGSGSGPGSCDALLDVSTVAVMGNGAECEWTGKRELTVWMGFDSVVEAHSGS-TTCSGDESCIILLEGGIRTEAFAVLSSSGSTPILAPHQPQAVSAVLVAPQEVGLCGEFALDGRASSGSSSRTLSAAWNVSSAAGGSAVTAVKQALAPFQGFLRATLNATALEIGLEFSFTLTVSNFLGAVDETTVTVTRMNDDVPTVAIVGPAAKAVKRSRLTSLKMTASPPACEEASSLTYAWSESGVGGYNELGI-AFQDLPGSDPTTLPIPPYALGNPGSSYHFKASSSSRSSTTSASAYVEVTVVQGDLRAFISDGQSRQHTVGADLVLDGSGSSDDDDIPESEFPLTYKWTCSQNCSGVAREYTSSEETVFVIPGGSLQAGLVYEYSLNVTKGTADSAVVYGLIRSDIATVKIEVVSFEAPEVIVTASDGGVKLDPTRKIVIYGGVVEPSGGEVEPSSSLLWTQTQGDLDMQAEDWSVFFSSLRTGTNLVIRPNILTGGSTYTFRLSAVHIVSLATGFAELSISANAAPTGGYIDVTPRMGVAALDTFSLECLSWSDDVDDLPLTFSFS--TMDESGAQHAVSASKTQSPEWRGPLPIGRAIDNYTLSIIGHVSDSYGATATSLTDAHGESVTVRVTGWEPSPNGSSLLDTLVEAYTVAAEVVQHNPGEPTSTVRAFASLLMDEINSTSP---GETSQYQACHATLVGVMINTAVADFGVLDYSPTSAAAVLDTLALLSSNRNALGTASQEALLGGSSSILDFAVEDGYWDSTISKPMLQLLDGVIGAYSSDS-SVVGSEEMGDDAAKNISRIVESMTLLMEAVMVDGEEVGTIESDYVEASCFITSNTDRMSFATGSSTVTFDAGAIATSPGSARRRTTALEGPRDPGGCKSGGCASQRRQVLNRRLDEQLSTSSSTIVVAQLEFGVNTRPSNIVEAGVTQIKLTSTSSGEDVPLAAPVTMTMRASVAST-KKVPSCSYYSEETGLWDSSGLVIDS----VQELSVGEDGEVYVQVSCSTLHLSDFTVTTTEVEPVFQPVTLTAGTEIFRSF-QVSALGLVLTATVIFGMMAIWGVSRIADRRAKMAEKLEVKVVDWYIATGEPKRRPTLPDLL 4830
L SA LSDT +F L F+ C+CT + S ALCG D + E+D G Y G G+ + S V +A GTV L R PEL++A FS+DG S++++FSP+ SASSGLLNA+D SGSGPGSC ALL+ S++A +G GA CEWTG+RELT+ +G+D++V+ +GS +C SCI LL+GG+RTEA AVLSS GSTP+L P P AVSAVLVAPQ VGLCG LDGRASSG+ SRT+SA+WNVS+A+ + ++++ ALA F+G L A L+A ALE G++F F LTV NFLG + TV VTR+ +D+P+VA++G A + VKRSR TSL++TA+ PAC E L ++WSE G GY+E+G FQ L DPT + P Y LG PGSSY F A+++S+ S SAS VEV+V QG LRA I G+ RQH+ G DLVLDGS S DDDDI +E + Y+W CSQNC+ ++ +V VIP L++GL+YE+ LNV+KG+ADS+ +Y +R D +VK++VVSFEAPEV++ + D +K DPT+K+VIYG V E S S LLWTQ +GDLD++ +WS F++ +TG NLVI +LTGGSTYTFRLSA + S ATGFA+++++ NA PTGG++ +PR GVAA+DTF LE L W+D+VDDLPL FSFS +ESG Q ++S + PEW+G LP+G + DNYT+ I GHVSDS+GATA S +DA G VTVRVTGW S NG + T+++AY A + PGE TSTVRA+ASLL+D+ SP E + YQ AT M+ DF VL+YS T+A A+LD + L+S + N + SQEA+L S+ +L+ A+E+ WDS P L+LLD VIG Y++ S VVG EE+GD AA+ + V SM LLM + + DGE+ I + +++ +TS T M F GS +V+ GAI +P S +R +G + R +L RR + ++T+S+TI +A L+F N RPS+ V+AGV+ I +T++S G+D+ L+APV MTMRAS+A+T PSC YY+E TGLWD GLV ++ + E + DG + V+C + HLSDFT++ EV FQ V LTAG +F ++S +G +L V + +R+AD + ++++L K + Y+ATG+ + RPTL L+
Sbjct: 210 LESAVLSDTQRTFSLQFSSRCFCTEVGW-----SGANVALCGYDIVSGEYDKG------------YILG-----------------------------------------GIPSVSDGVIE--YATGTVSLEARTAPPELLQAMFSNDGESIIVAFSPESSASSGLLNATDTASGSGPGSCKALLNASSIATIGEGAACEWTGERELTIAIGYDAIVKPDTGSGVSCLSQASCISLLDGGVRTEALAVLSSEGSTPVLVPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAASVAN-TSSIEAALALFEGSLVAELDAAALEPGVKFMFALTVGNFLGDTNGVTVAVTRIAEDIPSVAVLGSATRVVKRSRPTSLRITATSPACGERQQLNHSWSEVGGAGYDEIGTEVFQGLAQRDPTAITFPAYTLGYPGSSYLFAATATSQLSEASASMTVEVSVEQGVLRANIQGGEFRQHSAGNDLVLDGSDSVDDDDI--TELDMRYEWWCSQNCTSQDDWTADADGSVLVIPSEELESGLIYEFFLNVSKGSADSSDLYSQLRWDTVSVKVQVVSFEAPEVVLISKDDSLKQDPTKKVVIYGSVSEQSS-----SYDLLWTQAEGDLDLEEREWSTVFATAQTGANLVIPRGLLTGGSTYTFRLSATDVASQATGFADMTLTINAPPTGGHVVASPRAGVAAIDTFVLESLDWTDEVDDLPLLFSFSYNNEEESGQQRSLSVFAVELPEWQGSLPLGPSSDNYTMLIKGHVSDSFGATAVSTSDAIGSPVTVRVTGWTAS-NGDA---TIIDAYQAAHDETADTPGEATSTVRAYASLLVDQFEDASPYVPEEIALYQGLMAT----MVQDTAGDFEVLEYSTTTAGALLDAMVLVSGSENLRTSDSQEAILSLSAGVLERALEEESWDSDSFSPTLELLDNVIGGYNASSPGVVGREELGDVAAELLPETVRSMALLMTSSLEDGEDAALIGNSFIDVLGLVTSKTAAMDFDAGSLSVSVPEGAI--NPTSVQRXXXXXXXXXXX---XAGRIINGR--ILQRRRMDSIATASATITIASLQFSANGRPSSQVDAGVSSITITTSSGGQDIALSAPVRMTMRASMATTLSNSPSCVYYNEITGLWDEDGLVTEAAITPMDESNA--DGLTGLNVTCWSFHLSDFTISADEVGSGFQHVDLTAGIAVFLKVREISKMGGLLLLFVXXXXXLLRTTARMADVKTNLSKQLARKTDEVYVATGKSRNRPTLAALV 1408
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: D7G3A1_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A1_ECTSI) HSP 1 Score: 856 bits (2212), Expect = 1.360e-286 Identity = 530/1088 (48.71%), Postives = 666/1088 (61.21%), Query Frame = 1
Query: 1687 STTCSGDESCIILLEGGIRTEAFAVLSSSGSTPILAPHQPQAVSAVLVAPQEVGLCGEFALDGRASSGSSSRTLSAAWNVSS--AAGGSAVTAVKQALAPFQGFLRATLNATALEIGLEFSFTLTVSNFLGAVDETTVTVTRMNDDVPTVAIVGPAAKAVKRSRLTSLKMTASPPACEEASSLTYAWSESGVGGYNELGIAFQDLPGSDPTTLPIPPYALGNPGSSYHFKASSSSRSSTTSASAYVEVTVVQGDLRAFISDGQSRQHTVGADLVLDGSGSSDDDDIPESEFPLTYKWTCSQNCSGVAREYTSSEETVFVIPGGSLQAGLVYEYSLNVTKGTADSAVVYGLIRSDIATVKIEVVSFEAPEVIVTASDGGVKLDPTRKIVIYGGVVEPSGGEVEPSSSLLWTQTQGDLDMQAEDWSVFFSSLRTGTNLVIRPNILTGGSTYTFRLSAVHIVSLATGFAELSISANAAPTGGYIDVTPRMGVAALDTFSLECLSWSDDVDDLPLTFSF---STMDESGAQHAVSASKTQSPEWRGPLPIGRAIDNYTLSIIGHVSDSYGATATSLTDAHGESVTVRVTGWEPSPNGSSLLDTLVEAYTVAAEVVQHNPGEPTSTVRAFASLLMDEINST---SPGETSQYQACHATLVGVMINTAVADFGVLDYSPTSAAAVLDTLALLSSNRNALGTASQEALLGGSSSILDFAVEDGYWDSTISKPMLQLLDGVIGAYSSD-SSVVGSEEMGDDAAKNISRIVESMTLLMEAVMVDGEEVGTIESDYVEASCFITSNTDRMSFATGSSTVTFDAGAIAT-SPGSARRRTTAL--EGPRDPGGCKSGGCAS---QRRQVLNRRLDEQLSTSSSTIVVAQLEFGVNTRPSNIVEAGVTQIKLTSTSSGEDVPLAAPVTMTMRASVASTKKVPSCSYYSEETGLWDSSGLVIDSVQELSVGEDGEVYVQVSCSTLHLSDFTVTTTEVEPVFQPVTLTAGTEIFRSFQVSALGLVLTATVIFGMMAIWGVSRIADRRAKMAEKLEVKVVDWYIATGEPKRRPTLPDLLGTNSVEVVERKRKRKNESRTCGGRL 4905
+++C+ DESCI+L +GG+R EAFAVLSS GS P+L P P VSAVLVAPQ VGLCGEF+LDGR SSG++SR LSA WNVS+ A+ +AV AV AL PFQG L ATLN+T+LE +EF +L V NFLGAVD VTVTR+N+D P+V +VGPA K RSR TSL+M A+PPAC T+++ A VE+ V QG LRA IS GQ RQHTVGADLVLDGS S D+DDIPE EFPL Y W+CS+NCSGVA YT S+E +F IP GSL+AGLVYE+SLN++KGTA+S VVYG+ RSD ATV++ V GDLD+ DWS FF+S +TG LV RP++LTGGS+YTFRLSAV S TGFAE+ NA P+GGY++ TPR GVAA+D FSLE L W DD+ DLPL SF + DE+G Q ++S + +S EW GPLP+G A DNYT++II V + S ++ H + G SL+D YT AA V + PGE TS VRAFASLLM EIN++ SP E +Q T V MI+ V + VLDYS T+A A+LDT+A+LSS+ AL T SQ A+L S+SILD AV +GYW S +S LQ+LD VIGAY + ++VGS+ MG DAA N++ IV+SM LLMEA M DGE+V TIESD+V+ASC ITS T +SF G+S+V+F+ G I + SP S RRR T EG + CK+GGC S +RR+ +RRL S+ST++V F +RPS +V G+TQI+++ST GED+ LA PV +TMRAS+ S+ +PSCSYY+EETGLWDS GL I +V D + V VSC T HLSDF V TTE+E VFQPVTL AG + ++ GLVLT + + +W VSRIAD R+K AEKL+ + D YI TG P+R PTL D+ + KR+RK + G L
Sbjct: 4 TSSCTTDESCIVLKDGGVRAEAFAVLSSKGSVPVLPPDNPSTVSAVLVAPQWVGLCGEFSLDGRLSSGAASRPLSAVWNVSTTIASNSAAVAAVAGALQPFQGSLYATLNSTSLEPLVEFKISLIVENFLGAVDAAAVTVTRVNEDAPSVVVVGPATKTAIRSRPTSLRMAATPPAC------------------------------------------------------------GTSTSGAVVEIIVGQGTLRAAISGGQYRQHTVGADLVLDGSESLDEDDIPEEEFPLRYSWSCSKNCSGVADGYTGSDEAIFTIPSGSLEAGLVYEFSLNISKGTAESDVVYGVFRSDSATVQVRV--------------------------------------------------NGDLDLATADWSDFFTSTQTGAILVARPHVLTGGSSYTFRLSAVDTASGETGFAEMYFDVNAPPSGGYVEATPRAGVAAIDMFSLEALLWEDDIGDLPLKVSFFYVAGQDETGRQRSLSLYEVESVEWNGPLPVGSAADNYTMTIIVSVRKTQ-----SSSECHDSCFLTQTPG-------QSLMD----EYTAAASVTEDVPGEATSIVRAFASLLMVEINNSAAASPTEAQDFQ----TFVATMIDATVHESTVLDYSTTTAGAILDTMAILSSSEKALNTDSQAAILASSASILDTAVGEGYWSSGMSTSSLQVLDQVIGAYDTSLDTIVGSDLMGQDAANNLTAIVQSMGLLMEAGMEDGEDVMTIESDHVQASCLITSRTGSLSFDAGTSSVSFENGVIGSPSPPSTRRRMTPEMDEGSK----CKAGGCGSSTNRRRRPSSRRLSTVSPASTSTVLVTNQLFNAVSRPSALVNGGITQIRVSSTDDGEDIALAGPVQLTMRASMTSSALLPSCSYYNEETGLWDSEGLAIGAVAVPIDAGDSALDVLVSCVTFHLSDFGVATTEIETVFQPVTLGAGLSVVSGRDMTVWGLVLTVGALILLGIVWSVSRIADHRSKTAEKLQTRAYDHYIETGHPQRLPTLEDIKDLKQTLERKHKRRRKRRDESFAGYL 957
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: D7G3A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A0_ECTSI) HSP 1 Score: 793 bits (2049), Expect = 1.600e-260 Identity = 500/1096 (45.62%), Postives = 640/1096 (58.39%), Query Frame = 1
Query: 1687 STTCSGDESCIILLEGGIRTEAFAVLSSSGSTPILAPHQPQAVSAVLVAPQEVGLCGEFALDGRASSGSSSRTLSAAWNVSS--AAGGSAVTAVKQALAPFQGFLRATLNATALEIGLEFSFTLTVSNFLGAVDETTVTVTRMNDDVPTVAIVGPAAKAVKRSRLTSLKMTASPPACEEASSLTYAWSESGVGGYNELGIA-FQDLPGSDPTTLPIPPYALGNPGSSYHFKASSSSRSSTTSASAYVEVTVVQGDLRAFISDGQSRQHTVGADLVLDGSGSSDDDDIPESEFPLTYKWTCSQNCSGVAREYTSSEETVFVIPGGSLQAGLVYEYSLNVTKGTADSAVVYGLIRSDIATVKIEVVSFEAPEVIVTASDGGVKLDPTRKIVIYGGVVEPSGGEVEPSSSLLWTQTQGDLDMQAEDWSVFFSSLRTGTNLVIRPNILTGGSTYTFRLSAVHIVSLATGFAELSISANAAPTGGYIDVTPRMGVAALDTFSLECLSWSDDVDDLPLTFSFSTMDESGAQHAVSASKTQSPEWRGPLPIGRAIDNYTLSIIGHVSDSYGATATSLTDAHGESVTVRVTGWEPSPNGSSLLDTLVEAYTVAAEVVQHNPGEPTSTVRAFASLLMDEINSTS---PGETSQYQA--------CHA----------TLVGVMINTAVADFGVLDYSPTSAAAVLDTLALLSSNRNALGTASQEALLGGSSSILDFAVEDGYWDSTISKPMLQLLDGVIGAYSSDSSVVGSEEMGDDAAKNISRIVESMTLLMEAVMVDGEEVGTIESDYVEASCFITSNTDRMSFATGSSTVTFDAGAIAT--SPGSARRRTTALEGPRDPGGCKSGGCASQRRQV---LNRRLDEQLSTSSSTIVVAQLEFGVNTRPSNIVEAGVTQIKLTSTSSGEDVPLAAPVTMTMRASVASTKKVPSCSYYSEETGLWDSSGLVIDSVQELSVGEDGEVYVQVSCSTLHLSDFTVTTTEVEPVFQPVTLTAGTEIFRSFQVSALGLVLTATVIFGMMAIWGVSRIADRRAKMAEKLEVKVVDWYIATGEPKRRPTLPDLLGTNSVEVVERKRKRKNESR 4887
+++C+ DESCI+L +GG+R EAFAVLSS GS P+ +P P VSAVLVAP+ VGLCGEF+LDGR SSG++SR+LSA WNVS+ A+ +AV AV AL PFQG L ATLN+T+LE +EF +L V NFLG+ D VTVTR+N+DVP+V +VGPA K RSR+TSL+M A+PPAC +ASSL+++W+ESG GY+ LG + +DL G+DPT L IP Y LG PG Y F A+ SS T ++ A VE+ V QG +RA IS GQ RQHTVGADLVLDGS S D+DDIPE EFPL Y W+CS+NCSGVA Y+ S+E +F IP GSL+AGLVYE+SLN++KGTA+S VYG+ RSD+ATV+++V GDLD+ DW FF+ +TG NLV+RP++LTGGS+YTFRLSAV S TGFAE+ NA P+GGY++ TPR GVAA+D FSLE L W DD++DLPL SF Y A G SL+D YT A V + PGE TS VRAFASLL+ EIN+++ P E ++Q H+ T V MI+ V + VLDYS T A A+LDT+ +LSS+ AL T SQ S+ LLMEA M DGE V TIES+YV+ASC +TS+T +SF TG+S+V+F+ G +A+ SP + RR T ++G CKSG CA R + +RRL+ STS+ST+VV F N RPS +V GVTQIK++STS GED+ LA PV +TMRAS+ S+ ++PSCSYY+E+TGLWDS GL I +V L+ D V V VSC T HLSDF V TTEVEPVFQPVTL AG + R +++A GLVLT + + +W VSRIAD R+K AE+L+ + D YI TG P+R PTL D++ + +E+K K + + R
Sbjct: 4 TSSCTTDESCIVLKDGGVRAEAFAVLSSEGSVPVFSPDNPTTVSAVLVAPESVGLCGEFSLDGRLSSGAASRSLSAVWNVSTTTASNSAAVVAVAGALEPFQGSLHATLNSTSLEPLVEFEISLIVENFLGSFDTAAVTVTRVNEDVPSVVVVGPATKTAIRSRVTSLRMAATPPACGDASSLSFSWTESGTDGYDALGTSVMEDLVGNDPTALTIPAYTLGYPGPMYRFHATVSS--GTLTSGAVVEIIVGQGAVRAAISGGQYRQHTVGADLVLDGSESLDEDDIPEEEFPLRYSWSCSENCSGVADGYSGSDEAIFTIPSGSLEAGLVYEFSLNISKGTAESDAVYGVFRSDVATVQVQV--------------------------------------------------NGDLDLATADWGDFFTGTKTGANLVVRPHVLTGGSSYTFRLSAVDPASGETGFAEIYFDVNAPPSGGYVEATPRAGVAAIDMFSLEALLWEDDLEDLPLKVSF---------------------------------------------FYVA-------------------------GQSLMD----EYTAVASVTEDIPGETTSIVRAFASLLIVEINNSAAATPTEEQEFQVWATRERYDVHSYPLSSRMHDMTFVATMIDATVRESTVLDYSTTMAGAILDTMVVLSSSEKALNTDSQ----------------------------------------------------------------SIVLLMEAGMEDGEGVMTIESEYVQASCLVTSSTGSLSFDTGTSSVSFEDGVLASPSSPSTRRRMTHEIDGGLK---CKSGRCARSTRHMPKSSSRRLNSVSSTSTSTVVVTNQLFNANDRPSALVNGGVTQIKVSSTSDGEDIALAGPVQLTMRASMTSSAQLPSCSYYNEDTGLWDSEGLAIGAVAVLTDAADSAVDVLVSCVTFHLSDFGVATTEVEPVFQPVTLGAGLSVVRGREITAWGLVLTVGALILLGIVWSVSRIADHRSKTAERLQTRAYDHYIETGHPQRLPTLEDIMDLK--QTLEKKHKTRRKKR 904
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: D7FLQ1_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ1_ECTSI) HSP 1 Score: 607 bits (1566), Expect = 6.230e-197 Identity = 333/598 (55.69%), Postives = 435/598 (72.74%), Query Frame = 1
Query: 1453 FSDDGASVMISFSPDGSASSGLLNASDPGSGSGPGSCDALLDVSTVAVMGNGAECEWTGKRELTVWMGFDSVVEAHSGS-TTCSGDESCIILLEGGIRTEAFAVLSSSGSTPILAPHQPQAVSAVLVAPQEVGLCGEFALDGRASSGSSSRTLSAAWNVSSAAGGSAVTAVKQALAPFQGFLRATLNATALEIGLEFSFTLTVSNFLGAVDETTVTVTRMNDDVPTVAIVGPAAKAVKRSRLTSLKMTASPPACEEASSLTYAWSESGVGGYNELGI-AFQDLPGSDPTTLPIPPYALGNPGSSYHFKASSSSRSSTTSASAYVEVTVVQGDLRAFISDGQSRQHTVGADLVLDGSGSSDDDDIPESEFPLTYKWTCSQNCSGVAREYTSSEETVFVIPGGSLQAGLVYEYSLNVTKGTADSAVVYGLIRSDIATVKIEVVSFEAPEVIVTASDGGVKLDPTRKIVIYGGVVEPSGGEVEPSSSLLWTQTQGDLDMQAEDWSVFFSSLRTGTNLVIRPNILTGGSTYTFRLSAVHIVSLATGFAELSISANAAPTGGYIDVTPRMGVAALDTFSLECLSWSDDVDDLPLTFSFSTMDE 3240
FS+DG ++++FSP+ SASSGLLNA+D SGSGPGSC ALL+ S++A +G GA CEWTG+RELT+ +G+D++V+ +GS +C SCI LL+GG+RTEA AVLSS GSTP+LAP P AVSAVLVAPQ VGLCG LDGRASSG+ SRT+SA+WNVS+A+ + ++++ ALA F+G L A L+A ALE G++F F LTV NFLG + TV VTR+ +DVP+VA++G A + VKRSR TSL++TA+ PAC E L +WSE G Y+E+G FQ L DPT + P Y LG PGSSY F A+++S+ S SAS VEV+V QG LRA I G+ RQH+ G DLVLDGS S DDDDI +E + Y+W CSQNC+ ++ +V VIP L++GL YE+ LNV+KG+ DS +Y +R D A+VK++VVSFEAPEV++ + D +K DPT+K+VIYG V E S S LLWTQ +GDLD++ +WS F++ +TG NLVI +LTGGSTYTFRLSA + S ATGFA+++++ NA PTGG++D +PR GVAA+DTF LE L W+D+VDDLPL FSFS +E
Sbjct: 2 FSNDGELIIVAFSPESSASSGLLNATDTASGSGPGSCKALLNASSIATIGEGAACEWTGERELTIALGYDAIVKPDTGSGVSCLSQASCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAASFAN-TSSIEAALALFEGSLVAELDAAALEPGVKFMFALTVGNFLGDTNGVTVAVTRIAEDVPSVAVLGSATRVVKRSRPTSLRITATSPACGERQLLNRSWSEVGGAAYDEIGTEVFQGLAQRDPTVITFPAYTLGYPGSSYLFAATATSQLSEASASMTVEVSVEQGVLRANIQGGEFRQHSAGNDLVLDGSDSVDDDDI--TELDMRYEWWCSQNCTSQDDWTADADGSVLVIPSEELESGLFYEFFLNVSKGSVDSTDLYSQLRWDTASVKVQVVSFEAPEVVLISKDDSLKQDPTKKVVIYGSVSEQSS-----SYDLLWTQAEGDLDLEEREWSTVFATAQTGANLVIPRGLLTGGSTYTFRLSATDVASQATGFADMTLTINAPPTGGHVDASPRAGVAAVDTFLLESLDWTDEVDDLPLMFSFSYNNE 591
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: A0A6H5JM67_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM67_9PHAE) HSP 1 Score: 594 bits (1532), Expect = 7.710e-190 Identity = 356/725 (49.10%), Postives = 455/725 (62.76%), Query Frame = 1
Query: 2983 NLVIRPNILTGGSTYTFRLSAVHIVSLAT-----------------GFAELSISANAAPTGGYIDVTPRMGVAALDTFSLECLSWSDDVDDLPLTFSF----------STMDESGAQHAVSASKTQSPEWRGPLPIGRAIDNYTLSIIGHVSDSYGATATSLTDAHGESVTVRVTGWEPSPNGSSLLDTLVEAYTVAAEVVQHNPGEPTSTVRAFASLLMDEINSTS---PGETSQYQACHATLVGVMINTAVADFGVLDYSPTSAAAVLDTLALLSSNRNALGTASQEALLGGSSSILDFAVEDGYWDSTISKPMLQLLDGVIGAYSSDS-SVVGSEEMGDDAAKNISRIVESMTLLMEAVMVDGEEVGTIESDYVEASCFITSNTDRMSFATGSSTVTFDAGAIAT--SPGSARRRTTALEGPRDPGGCKSGGCASQRRQV---LNRRLDEQLSTSSSTIVVAQLEFGVNTRPSNIVEAGVTQIKLTSTSSGEDVPLAAPVTMTMRASVASTKKVPSCSYYSEETGLWDSSGLVIDSVQELSVGEDGEVYVQVSCSTLHLSDFTVTTTEVEPVFQPVTLTAGTEIFRSFQVSALGLVLTATVIFGMMAIWGVSRIADRRAKMAEKLEVKVVDWYIATGEPKRRPTLPDLLGTNSVEVVERKRKRKNESRTCGGRLWHGLKDRFAAWHHRSRVVVLHILEYHPWAGILKPSTSNLTLTRGQLSI 5049
NLVIRP +LTGGS+Y FRLSAV S T GFAE+ NA P+GGY+ TPR GVAA+D FSLE L W DD++DLPL SF DE+G Q ++S + +S EW GPLP+G A DNYT++IIGH+SDSYGAT TS D GE++ VRVTGW S +G SL++ YT AA V + PGE TS VRAFASLL+ EIN+++ P E ++Q T V MIN V + VLDYS T A A+LDT+ +LSS+ AL T SQ A+L S+SIL A +GYWDS + P +++LD VIGAY + S ++VGS MG DAA N+ IV+SM LLMEA M DGE V TIES+YV+ASC +TS+T +SFATG+S+V+F+ G IA+ SP + RR T ++G CKSGGCA R++ +RRL+ TS+ST+VV F N RPS +V GVTQIK++STS GED+ LA PV +TMRAS+AST ++PSC YY+EETG WDS GL I +V + D V V VSC T HLSDF V TTE+EPVFQPVTL AG + R ++ G VLT + + +W VSR+AD R+K AE L+ + D YI TG P+R PTL D+ + L RF +W ++ H+L +HPWAGI+ PS ++LTLTR Q+ I
Sbjct: 15 NLVIRPYVLTGGSSYMFRLSAVDTASGETAFESHRYCCACGHIHLSGFAEIHFDVNAPPSGGYVQATPRAGVAAIDMFSLEALLWEDDIEDLPLKVSFFYVAGQHQFDPLQDETGTQRSLSLYEVESVEWNGPLPVGSAADNYTMTIIGHISDSYGATETSFFDESGETLLVRVTGWAASSSGLSLMN----EYTAAASVTEDIPGETTSIVRAFASLLIVEINNSAAATPTEEQEFQ----TFVATMINATVRESTVLDYSTTMAGAILDTMVVLSSSEKALNTDSQAAILASSASILITAAGEGYWDSGMYTPTVEVLDQVIGAYDASSDTIVGSGVMGQDAASNLRAIVQSMVLLMEAGMEDGEGVMTIESEYVQASCLVTSSTGSLSFATGTSSVSFEDGVIASPSSPSTRRRMTPEIDGGSK---CKSGGCARSTRRMPKSSSRRLNSVSLTSTSTVVVTNQLFNANDRPSALVNGGVTQIKVSSTSDGEDIALAGPVQLTMRASMASTAQLPSCLYYNEETGRWDSEGLAIGAVAVPTNAGDSAVDVLVSCVTFHLSDFGVATTEIEPVFQPVTLEAGLSVVRGKDITVWGFVLTVGALILLGIVWSVSRMADHRSKTAEMLQTRAYDHYIETGHPQRLPTLEDIKDLRQTXXXXXXXXXXXXDESFVRYLRRKTFQRFRSWLQLMWALLKHVLFFHPWAGIIAPSGTHLTLTRAQVGI 728
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: D7FLQ3_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ3_ECTSI) HSP 1 Score: 265 bits (677), Expect = 3.540e-75 Identity = 165/339 (48.67%), Postives = 213/339 (62.83%), Query Frame = 1
Query: 3907 MGDDAAKNISRIVESMTLLMEAVMVDGEEVGTIESDYVEASCFITSNTDRMSFATGSSTVTFDAGAIAT-SPGSARRRTTAL--EGPRDPGGCKSGGCAS---QRRQVLNRRLDEQLSTSSSTIVVAQLEFGVNTRPSNIVEAGVTQIKLTSTSSGEDVPLAAPVTMTMRASVASTKKVPSCSYYSEETGLWDSSGLVIDSVQELSVGEDGEVYVQVSCSTLHLSDFTVTTTEVEPVFQPVTLTAGTEIFRSFQVSALGLVLTATVIFGMMAIWGVSRIADRRAKMAEKLEVKVVDWYIATGEPKRRPTLPDLLGTNSVEVVERKRKRKNESRTCGGRL 4905
MG DAA N++ IV+SM LLMEA M DGE+V TIESD+V+ASC ITS T +SF G+S+V+F+ G I + SP S RRR T EG + CK+GGC S +RR+ +RRL S+ST++V F +RPS +V GVTQI+++ST GED+ LA PV +TMRAS+ S+ +PSCSYY+EETGLWDS GL I +V D + V VSC T HLSDF V TTE+E VFQP AG + ++ GLVLT + + +W VSRIAD R+K AEKL+ + D YI TG P+R PTL D+ + KR+RK + G L
Sbjct: 1 MGQDAANNLTAIVQSMGLLMEAGMEDGEDVMTIESDHVQASCLITSRTGSLSFDAGTSSVSFENGVIGSPSPPSTRRRMTPEMDEGSK----CKAGGCGSSTNRRRRPSSRRLSTVSPASTSTVLVTNQLFNAVSRPSALVNGGVTQIRVSSTDDGEDIALAGPVQLTMRASMTSSALLPSCSYYNEETGLWDSEGLAIGAVAVPIDAGDSALDVLVSCVTFHLSDFGVATTEIETVFQPG---AGLSVVSGRDMTVWGLVLTVGALILLGIVWSVSRIADYRSKTAEKLQTRAYDHYIETGHPQRLPTLEDIKDLKQTLERKHKRRRKRRDESFAGYL 332
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: A0A6H5JQT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT8_9PHAE) HSP 1 Score: 256 bits (655), Expect = 6.370e-73 Identity = 184/427 (43.09%), Postives = 219/427 (51.29%), Query Frame = 1
Query: 859 AFVKGYRTHTVIPHTPSPTEIPTPSPVMPTQAVTPAPTGDSSSTYFPEEHLLPALISAELSDTDSSFVLSFNRTCYCTSSDFRMMLSSSFPPALCGQDHQTREFDNGCAIESLLDANTMYFFGENTTACQWSDDSSQAVVTFNEALVTTWDPAPNITLTGRYIYGLANSSSTVQPTLFAEGTVELMLRQPAPELVEARFSDDGASVMISFSPDGSASSGLLNASDPGSGSGPGSCDALLDVSTVAVMGNGAECEWTGKRELTVWMGFDSVVEAHSGSTTCSGD--------ESCIILLEGGIRTEAFAVLSSSGSTPILAPHQPQAVSAVLVAPQEVGLCGEFALDGRASSGSSSRTLSAAWNVSS--AAGGSAVTAVKQALAPFQGFLRATLNATALEIGLEFSFTLTVSNFLGAVDETTVTVTRM 2109
A V YRTHT P T SPTE AP GDS+ FP P L SAELS T+S FV+SFNRTCYCT+ LS FPPALCGQD +T FD C + SLLD +T FFGE+TT CQWS+ S +AVV+FNE+ V WDPAPNITL G G +S +RELTV +G D+ V A S ESCI+L +GG+R EAFA+LSS GS P+L P P AVLVAPQ VGLCGEF+LDGR SSG++SR+LSA WNVS+ A+ +AV AV AL PFQG L AT+N+T+LE +EF +L V NFLG+VD VTVTR+
Sbjct: 5 ADVIAYRTHTETPITASPTE---------------APIGDSNE-IFP-----PGLTSAELSGTESLFVISFNRTCYCTAGAGASELS--FPPALCGQDFETAAFDQRCNVTSLLDESTREFFGESTTTCQWSNGSKEAVVSFNESSVVMWDPAPNITLAG----GRHRNS---------------------------------------------------------------------------------------QRELTVLLGSDASVVAESXXXXXXXXXXXXXXXXESCIVLKDGGVRAEAFAILSSEGSVPVLPPDNPTKALAVLVAPQWVGLCGEFSLDGRMSSGAASRSLSAVWNVSTTLASDSAAVAAVAGALEPFQGSLYATVNSTSLEPLVEFEVSLIVENFLGSVDAAAVTVTRV 317
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE) HSP 1 Score: 191 bits (486), Expect = 5.930e-46 Identity = 126/290 (43.45%), Postives = 168/290 (57.93%), Query Frame = 1
Query: 3217 FSFSTMDESGAQHAVSASKTQSPEWRGPLPIGRAIDNYTLSIIGHVSDSYGATATSLTDAHGESVTVRVTGWEPSPNGSSLLDTLVEAYTVAAEVVQHNPGEPTSTVRAFASLLMDEINSTS---PGETSQYQACHATLVGVMINTAVADFGVLDYSPTSAAAVLDTLALLSSNRNALGTASQEALLGGSSSILDFAVEDGYWDSTISKPMLQLLDGVIGAYS-SDSSVVGSEEMGDDAAKNISRIVESMTLLMEAVMVDGEEVGTIESDYVEASCFITSNTDRMSFATG 4074
F S + SG Q ++S T+SPEW+G HVSDS+GAT S +DA G VTVRVTGW S NG S T+V+AY A E PG+ TSTVRA+ASLL+D+ S P E + YQ AT M+ A DF VL+YS T+A A+LDT+ L+S + N + SQEA+L S+ +L+ AVE+ WDS P L++LD VIG Y+ S + VVG EE+GD AA+ + V SM LLM + + DGE+ I + +++ +TS T M F G
Sbjct: 10 FVSSPQEGSGQQRSLSVFATESPEWQG-----------------HVSDSFGATTVSTSDAIGSPVTVRVTGWTAS-NGES---TIVDAYQAAHEETADTPGDATSTVRAYASLLVDQFEDASLYLPEEIAMYQGLMAT----MVQDAADDFEVLEYSTTTAGALLDTMVLVSGSENLRTSDSQEAILSLSTGVLERAVEEDSWDSDSFSPTLEVLDNVIGGYNLSSAGVVGREELGDVAAEILPETVRSMALLMTSSLEDGEDAALIGNSFIDVLGLVTSKTSAMDFDAG 274
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Match: D7FLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ0_ECTSI) HSP 1 Score: 145 bits (365), Expect = 3.790e-35 Identity = 91/219 (41.55%), Postives = 131/219 (59.82%), Query Frame = 1
Query: 3430 WEPSPNGSSLLDTLVEAYTVAAEVVQHNPGEPTSTVRAFASLLMDEINSTS---PGETSQYQACHATLVGVMINTAVADFGVLDYSPTSAAAVLDTLALLSSNRNALGTASQEALLGGSSSILDFAVEDGYWDSTISKPMLQLLDGVIGAYSSDSS-VVGSEEMGDDAAKNISRIVESMTLLMEAVMVDGEEVGTIESDYVEASCFITSNTDRMSFATG 4074
+ P+G + T+++AY A + PGE TSTVRA+ASLL+D+ S P E + YQ AT M+ A DF VL+YS T+A A+LDT+ L+S + N + SQEA+L S+ +L+ AVE+ WDS P L+LLD VIG Y++ S+ VVG E++GD AA+ + V SM LLM + + DGE+ I + +++ +TS T M A G
Sbjct: 6 YHTDPSG---VQTIIDAYQAAHDETADTPGEATSTVRAYASLLVDQFEDASLYVPEEITMYQGLMAT----MVQDAADDFEVLEYSTTTAGALLDTMVLVSGSENLRTSDSQEAILSLSAGVLERAVEEDSWDSDSFSPTLELLDNVIGGYNASSAGVVGREKLGDAAAELLPETVRSMALLMTSNLEDGEDAALIGNSFIDVLGLVTSKTAAMDLAAG 217 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1026.393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1026.393.1 >prot_S-firma_F_contig1026.393.1 ID=prot_S-firma_F_contig1026.393.1|Name=mRNA_S-firma_F_contig1026.393.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1691bp LVVSSISYDGTVYEYEVKLFDISNYGIVQGPSKNEVFAPPDPGALVAAAVback to top mRNA from alignment at S-firma_F_contig1026:7055..25938+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1026.393.1 ID=mRNA_S-firma_F_contig1026.393.1|Name=mRNA_S-firma_F_contig1026.393.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=18884bp|location=Sequence derived from alignment at S-firma_F_contig1026:7055..25938+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1026:7055..25938+ >mRNA_S-firma_F_contig1026.393.1 ID=mRNA_S-firma_F_contig1026.393.1|Name=mRNA_S-firma_F_contig1026.393.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=10146bp|location=Sequence derived from alignment at S-firma_F_contig1026:7055..25938+ (Sphaerotrichia firma ET2_F female)back to top |