mRNA_S-firma_F_contig10252.386.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: D7FP20_ECTSI (Glutamate--cysteine ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP20_ECTSI) HSP 1 Score: 209 bits (533), Expect = 3.980e-61 Identity = 99/139 (71.22%), Postives = 116/139 (83.45%), Query Frame = 1
Query: 1 YRPCADEPQNGFEEMAVLEILEGKGDFMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVASPTIE 417
Y PC ++PQ+G EEM VL+ILEGKGD+ GLIP+V AYLEYI+AD ST+ V+ YL+HLRKRAAGE+MTTAAWLR FV SHPGY DS VTDEIAYDLV CQ+IGLGKRACPELLGDRTI E++R +AWDV + S +E
Sbjct: 559 YSPCDNDPQSGLEEMTVLQILEGKGDYPGLIPLVHAYLEYINADSSTIKDVELYLDHLRKRAAGEIMTTAAWLRKFVTSHPGYGKDSAVTDEIAYDLVQACQEIGLGKRACPELLGDRTIREVTRDEAWDVVLDSSKME 697
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: A0A7S3LCF6_9STRA (Glutamate--cysteine ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCF6_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.140e-41 Identity = 76/136 (55.88%), Postives = 99/136 (72.79%), Query Frame = 1
Query: 7 PCA--DEPQNGFEEMAVLEILEGKGD-FMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVAS 405
PCA + +N FEEM + EI+ GKGD F GLIP+V AYL+YI+ D T + + YLE + KRA+GE++T A W+R FVR+HP Y+ DSVV+DEIAYDL+ C+DIGLGK PELLGD I+ IS A+DV++ S
Sbjct: 129 PCAPGSDEENAFEEMTMEEIMSGKGDYFPGLIPLVFAYLDYINCDHVTRERLTTYLEFIEKRASGELVTPATWMRKFVRNHPAYKGDSVVSDEIAYDLMIACRDIGLGKLHVPELLGDVKIDLISPDGAYDVKLDS 264
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: A0A7S0GCH6_9STRA (Glutamate--cysteine ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCH6_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.350e-39 Identity = 67/135 (49.63%), Postives = 99/135 (73.33%), Query Frame = 1
Query: 13 ADEPQNGFEEMAVLEILEGKGD-FMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVASPTI 414
A+E +N +EEM + EI+ GKGD F GLIP+++AYL+YI D T+ V++Y++ + KRA+G ++T A W+R FVR HPGY+ DSV+T+ IAYDL+ C++IG G R PELLGD T ++I+ A+DV++ S +
Sbjct: 118 ANEEENSYEEMTMAEIMTGKGDYFPGLIPLIRAYLDYIKCDTFTLARVNQYMDLIEKRASGVLVTPATWMRKFVREHPGYKNDSVITEAIAYDLMVACKEIGEGTRHVPELLGDLTFDQITTEGAYDVKLDSKLV 252
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: A0A7S1V5E5_9STRA (Glutamate--cysteine ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V5E5_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.160e-38 Identity = 67/132 (50.76%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 25 QNGFEEMAVLEILEGKGD-FMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVASPTIE 417
+N +EEM + EI+ GKGD F GLIP+V AYL++I+ D T V++YL+ + KRA G+++T A W+R++VRSHP Y+ DSVVTDEIAYDL+ TC++IGLG+ PELL I+EI+ A++V++ S ++
Sbjct: 122 ENAYEEMTMAEIMTGKGDYFPGLIPLVFAYLDHINCDSVTRQKVEKYLDFIEKRATGKLLTPATWMRNYVRSHPAYKGDSVVTDEIAYDLMQTCKEIGLGQLHVPELLDGVKIDEITAEGAYEVKLDSQRLQ 253
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: A0A1Z5KPV7_FISSO (Glutamate--cysteine ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPV7_FISSO) HSP 1 Score: 143 bits (360), Expect = 7.610e-37 Identity = 70/139 (50.36%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 7 PCA--DEPQNGFEEMAVLEILEGKGD-FMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVASPTI 414
PCA ++ +EEM++ EI+ GKGD F GLIP+V AYL++I D+ T + +D+YL+ L +RA GE++T A W+R FVR+HP Y+ DS+VTDEIA+DL+ C+DIGLGK PELLG IE I+ A+DV + + +
Sbjct: 784 PCALGSSEEHSYEEMSMAEIMCGKGDYFPGLIPLVHAYLDHISCDKVTRERLDKYLDFLERRAKGELVTPATWMRTFVRNHPKYKRDSIVTDEIAFDLMVACRDIGLGKLHVPELLGPYAIEPITTEGAYDVPLQTTRV 922
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: A0A7R9WEL6_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEL6_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.600e-36 Identity = 70/136 (51.47%), Postives = 100/136 (73.53%), Query Frame = 1
Query: 1 YRPCADEPQNGFEEMAVLEILEGKGD-FMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVAS 405
+ P ++E +N + EM + EI+ GKGD F GLIP+VQAYL+YI+ D T +D+YL+ ++KRA GE++T A W+R+FVR+H Y+ DSVV+DEIAYDL+ C++IG G R PELLGD I+ I+ A+DV++ S
Sbjct: 816 FAPGSNE-ENSYAEMTMAEIMTGKGDYFPGLIPLVQAYLDYINCDSITRARIDQYLDFIQKRATGELVTPATWIRNFVRTHESYKGDSVVSDEIAYDLMVACKEIGEGIRHVPELLGDVKIKPITSAGAYDVKLES 950
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: A0A835ZCQ8_9STRA (Glutamate--cysteine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCQ8_9STRA) HSP 1 Score: 140 bits (353), Expect = 5.590e-36 Identity = 76/154 (49.35%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 1 YRPCADEP--------QNGFE---EMAVLEILEGK---GDFMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVASPTIEA 420
+R C D P + G + EM +LEIL G+ G + GLIP+V AYL+YI D +T + V+ YLE LR+RA+GEVMT AAW+R FV HP Y DSVV+DE+AYDL+ +D+G G+RA PELLG IE + A+DV +AS I+A
Sbjct: 539 FRRCIDPPGAAGESPQEEGLDCCAEMTILEILMGQNGGGGYPGLIPLVYAYLDYIGTDAATFERVEAYLELLRRRASGEVMTAAAWMRRFVTRHPAYCGDSVVSDEVAYDLMLAARDVGEGRRAAPELLGPEVIEPVLPEGAFDVPLASARIDA 692
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: A0A7S1ZWD3_TRICV (Glutamate--cysteine ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWD3_TRICV) HSP 1 Score: 140 bits (352), Expect = 9.120e-36 Identity = 66/131 (50.38%), Postives = 98/131 (74.81%), Query Frame = 1
Query: 25 QNGFEEMAVLEILEGKGD-FMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVASPTI 414
+N FEEM + EI+ GKGD F GLIP+VQAYL++I+ D + +D+YL+ +++RA GE++T A+W+R+F+RSH Y+ DSVV+DEIA+DL+ C++IG G R PE+LGD I+ I+ A+DV++ S I
Sbjct: 809 ENSFEEMTMAEIMTGKGDYFPGLIPLVQAYLDHINCDSISRQRIDQYLDFIQRRATGELVTPASWIRNFIRSHKSYQGDSVVSDEIAHDLMVACKEIGEGTRHVPEILGDIRIDPITTAGAYDVKLESRRI 939
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: B7FYG6_PHATC (Glutamate--cysteine ligase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYG6_PHATC) HSP 1 Score: 139 bits (349), Expect = 1.960e-35 Identity = 65/132 (49.24%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 25 QNGFEEMAVLEILEGKGD-FMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVASPTIE 417
+N FEEM + EI+ GKGD F GLI ++ AYL++I+ D+ T+ ++ YL + KRA GE++T A W+R+FVR+HP Y DS+++DEIAYDL+ C+DIG GK PELLGD I+ I+ A+DV++ S ++
Sbjct: 587 ENSFEEMTMNEIMNGKGDHFPGLIVLILAYLDHINCDKVTLKRLENYLTFIAKRATGELVTPATWMRNFVRNHPAYEQDSILSDEIAYDLMIACRDIGQGKLHVPELLGDNIIDPITSEGAYDVKLDSKRVQ 718
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Match: K0RUT7_THAOC (Glutamate--cysteine ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUT7_THAOC) HSP 1 Score: 137 bits (346), Expect = 5.920e-35 Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = 1
Query: 25 QNGFEEMAVLEILEGKGD-FMGLIPVVQAYLEYIDADRSTMDHVDRYLEHLRKRAAGEVMTTAAWLRHFVRSHPGYRMDSVVTDEIAYDLVATCQDIGLGKRACPELLGDRTIEEISRGKAWDVEVAS 405
+N +EEM + EI+ GKGD F GLIP+V AYL+YI D T++ V +YL+ + KRA G+++T A W+R+F+RSH Y DSVV+D IAYDL+ CQ+IG GKR PELLGD I+ I+ A+ ++ S
Sbjct: 884 ENSYEEMTLAEIMVGKGDYFPGLIPLVHAYLDYIQCDSVTLERVSQYLDFIEKRATGQLVTPATWIRNFIRSHEDYNFDSVVSDSIAYDLMVACQEIGEGKRHVPELLGDIKIKPIAASGAYTSKMDS 1011 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10252.386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10252.386.1 >prot_S-firma_F_contig10252.386.1 ID=prot_S-firma_F_contig10252.386.1|Name=mRNA_S-firma_F_contig10252.386.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=141bp YRPCADEPQNGFEEMAVLEILEGKGDFMGLIPVVQAYLEYIDADRSTMDHback to top mRNA from alignment at S-firma_F_contig10252:2356..4241- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10252.386.1 ID=mRNA_S-firma_F_contig10252.386.1|Name=mRNA_S-firma_F_contig10252.386.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1886bp|location=Sequence derived from alignment at S-firma_F_contig10252:2356..4241- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10252:2356..4241- >mRNA_S-firma_F_contig10252.386.1 ID=mRNA_S-firma_F_contig10252.386.1|Name=mRNA_S-firma_F_contig10252.386.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=846bp|location=Sequence derived from alignment at S-firma_F_contig10252:2356..4241- (Sphaerotrichia firma ET2_F female)back to top |