mRNA_S-firma_F_contig1025.381.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: D7G5S7_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S7_ECTSI) HSP 1 Score: 484 bits (1247), Expect = 5.830e-160 Identity = 332/640 (51.88%), Postives = 405/640 (63.28%), Query Frame = 1
Query: 1 MGCVSSKVGQRPPEHKPGHKAREDGRRGESRAVESRPAQPVVDS-DGERKAPASQSRDKRKGGPKEQARHGEGARRMAGGEEEREGETVTDATGLQMRTPRTSTDRGLHYAAKNGDLPLVHKLLGNSTTGHGQGRT---------QRKPSPRTATSTPVAADVDERGMWGNTPLLVATQYAYPQVALALIAAGANTRLENERQATALHFSCAEGLLDVGRALLEHGANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEVDRRVSPKRADGQDRRTSFSGTDGVGGSALTAAARYGHTETCFLLVDSGASVLLQDWDARTPLLHAILGGHAETSLALLDVAREARCARQLAGGASTTTG---PSRLTPLHAACDNGMHTVVKALLAAGAQVESRDGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQRRIERSDGEEILRLVEAAIAGIERRQDR---DRAQPALRSRDSQV------GCHC-----QRDADEAGDDXXXXXXXXXEEDVLLVSDWDADVVGGGVHELELDDCDVLDG-------------PVPGPAYRDHGHHHLXXXXXXXXXDVLLVGDYDADMEEDAILMADMPCPGSRSRRDS--GSRE 1794
MGCVSSKVGQRPP+ GH+A + E ESRPA PVV R A + + ++ G E R GE R GGE E EGET+TD +GLQMRTPRT D GL+ AAKNGDLPLV +L +S TG G Q +P P A + AD+DERGMWGNTPL+VATQYA+P +ALALIA GAN LENERQATALHFSCAEG + V ALL +GANVDP VA VHHP VNGGQT+P+TPLSAA++GG+TELVRLLV+ G +++RRV+P +DG++RR+SF GTDG+GGSALTAAARYGHTETCFLLVDSGA++LL+DW++RTPLLHAILGGH +T++ALLD AR C QL G S TG S L PLHAACD G+ VV+AL+AAGA+VE +D AGA XXXXXXXXXXXXXXXXXX A+ R ++ GEEIL L+EAA+A E R R D ++ AL ++ + V GC QR+ ++ +D EEDV LVSDWD D G + + D+C+V + P P D DVLLVGDYD+ +EE+ L CP + R D+ G+RE
Sbjct: 1 MGCVSSKVGQRPPDQVAGHEANKSAGGQEEAREESRPALPVVGQIQPARPAQSKNTENRNVQGKAEHHRSGENPR-AKGGEWEEEGETITDVSGLQMRTPRTCADPGLYAAAKNGDLPLVQMIL-SSNTGRGAAAVDAGDDGTMYQDRPEPDGAVPSSKVADLDERGMWGNTPLIVATQYAHPDIALALIAGGANVTLENERQATALHFSCAEGSVGVVSALLNNGANVDPSVATVHHPGVNGGQTIPLTPLSAAATGGYTELVRLLVQHGVDINRRVAPVGSDGKERRSSFLGTDGIGGSALTAAARYGHTETCFLLVDSGANLLLEDWNSRTPLLHAILGGHEQTAMALLDGARSVGCVSQLVGACSPETGGATSSGLAPLHAACDKGLQDVVRALVAAGAKVEEKDVAGASALLHXXXXXXXXXXXXXXXXXXDPMAADSEGDTPVSVARSRRDQPGGEEILSLLEAAVADDEHRDGRLGSDGSRRALGAKINDVNNGEDEGCDVLTDGSQREKEDGNED---------EEDVFLVSDWDPD--GEDIFD---DNCNVAERCGQSRQSENVENLPEPAAVNADENDDE---------DDVLLVGDYDSQLEEEEFLDV---CPAADEREDATVGTRE 612
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: A0A6H5JYM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM2_9PHAE) HSP 1 Score: 436 bits (1122), Expect = 3.250e-141 Identity = 248/413 (60.05%), Postives = 297/413 (71.91%), Query Frame = 1
Query: 1 MGCVSSKVGQRPPEHKPGHKARED-GRRGESRAVESRPAQPVVDSDGERKAPASQSRDKRKGGPKEQARHGEGARRMAGGEEEREGETVTDATGLQMRTPRTSTDRGLHYAAKNGDLPLVHKLLGNSTTGHGQGRT---------QRKPSPRTATSTPVAADVDERGMWGNTPLLVATQYAYPQVALALIAAGANTRLENERQATALHFSCAEGLLDVGRALLEHGANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEVDRRVSPKRADGQDRRTSFSGTDGVGGSALTAAARYGHTETCFLLVDSGASVLLQDWDARTPLLHAILGGHAETSLALLDVAREARCARQLAGGASTTTG---PSRLTPLHAACDNGMHTVVKALLAAGAQVESRDGAGA 1200
MGCVSSKVGQ PP+ GH+A+E G +GE+R ESRPA PV + S++ +KR K + G R GGE E EGET+TD +GLQMRTPRT D GL+ AAKNGDLPLV +L +S TG G Q +P P AD+DERGMWGNTPL+VATQYA+P +ALALIA GAN LENERQATALHFSCAEG + V ALL GANVDP VA VHHP VNGGQT+P+TPLSAA++GG+TELVRLLV+ G +++RRV+P DG++RR+SF GTDG+GGSALTAAARYGHTETC LLVDSGA++LL+DW++RTPLLHAILGGH +T++ALLD AR C QL G S TG S L PL AACD G+ +V+AL+AAGA+VE +D GA
Sbjct: 1 MGCVSSKVGQTPPDQVAGHEAKESAGGQGEARE-ESRPALPVGGHIQPARPAQSKNAEKRNVQGKAEHHRSGGNPRAKGGEWEEEGETITDLSGLQMRTPRTCADPGLYAAAKNGDLPLVQMIL-SSNTGRGAAAVDAGDDGTMYQDRPEPDGPAPGSKVADLDERGMWGNTPLIVATQYAHPDIALALIAGGANVTLENERQATALHFSCAEGSVGVASALLNSGANVDPSVATVHHPGVNGGQTIPLTPLSAAATGGYTELVRLLVQHGVDINRRVAPVGGDGKERRSSFLGTDGIGGSALTAAARYGHTETCLLLVDSGANLLLEDWNSRTPLLHAILGGHEQTAMALLDRARSVGCVSQLVGACSPETGGATSSGLAPLRAACDKGLQDLVRALVAAGAKVEEKDVTGA 411
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: A0A836CL65_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL65_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 6.870e-12 Identity = 66/189 (34.92%), Postives = 94/189 (49.74%), Query Frame = 1
Query: 466 RGMWGNTPLLVATQYAYPQVALALIAAGANTRLENERQATALHFSCAEGLLD--VGRALLEHGANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEVDRRVSPKRADGQDRRTSFSGTDGVGG-SALTAAARYGHTETCFLLVDSGASVLLQDWDARTPLLHAILGGHAETSLAL 1023
R GNTPL++A Q + +VA L AGA+ L N A AL ++C G + +L GA DPP A V P++ Q + TPL AA+ G ++LV+ GA +DR + A+ + GG ++L A GH E LV ASVL++D D R+ L+HA + H + AL
Sbjct: 50 RDAHGNTPLMLALQQEHIEVAFVLAHAGADLTLVNSDGAGALLWACLVGASAPVLAGMMLRKGAPADPPAAEVEVPSLGIRQRL--TPLLAATICGCKVTCQVLVKYGANIDRATFVQPAEQCKKGEPAPPLYERGGITSLMMACLMGHGELAAALVAMDASVLVEDADGRSALMHACINRHEDVRTAL 236
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: A0A3Q0JDM6_DIACI (ankyrin repeat and KH domain-containing protein 1 n=2 Tax=Diaphorina citri TaxID=121845 RepID=A0A3Q0JDM6_DIACI) HSP 1 Score: 77.4 bits (189), Expect = 6.160e-11 Identity = 82/258 (31.78%), Postives = 110/258 (42.64%), Query Frame = 1
Query: 460 DERGMWGN-TPLLVATQYAYP---QVALALIAAGANTRLENERQATALHFSCAEGLLDVGRALLEHGANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEVDRRVSPKRADGQDRRTSFSGTDGVGGSALTAAARYGHTETCFLLVDSGA-----------SVLLQD--WDARTPLLHAILGGHAETSLALLDVAREARCARQLAGGASTTTGPSRLTPLHAACDNGMHTVVKALLAAGAQVES 1182
++RG+ G TPL+ A Q ++ LI E Q TAL +C G LDV LL++GAN++ + TPL A+ GH ELVR L++ GA+V + G +ALT A GHT+ LL+ GA SVL +D D T L+ A GGHA LLD R A T TG + LT AC+NG V LL+ GA +++
Sbjct: 422 EDRGIKGECTPLMEAASSGNVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---------------TPLMEAAQEGHLELVRYLLDSGAQVHAKTQ------------------TGDTALTYACENGHTDVADLLLSYGANLVSNKQINISSVLSKDNLTDNSTMLIEAAKGGHANVVQLLLDFPRSVVPRFIHLVHAKTQTGDTALTY---ACENGHTDVADLLLSYGANLDN 643
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: A0A0P1B766_PLAHL (Ankyrin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B766_PLAHL) HSP 1 Score: 75.9 bits (185), Expect = 7.560e-11 Identity = 58/193 (30.05%), Postives = 101/193 (52.33%), Query Frame = 1
Query: 268 DATGLQMRTPRTSTDRGLHY--AAKNGDLPLVHKLLGN------STTGHGQGRTQRKPSPRTATSTPVAADVDERGMWGNTPLLVATQYAYPQVALALIAAGANTRLENERQATALHFSCAEGLLDVGRALLEH------GANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEVDRRV 804
++T L++ + D G+ + A K GD+ ++ LL S+T + + + K + V+ RGMW +TPL+ A QYA+ + AL L+ GAN NE+ TAL + EGL + L+E+ ++D + V++ + + ++PL AAS GH ++VRLL++ GA+V+++V
Sbjct: 48 NSTTLEIEASFSHADLGVQFLKAVKRGDVAIMETLLLQYQVQEPSSTEFFENKIEGKG---------IETLVNIRGMWESTPLISAAQYAHCEAALWLLNHGANPHSSNEKNVTALLLASLEGLTPLVVKLVENIDSKSSTQSIDQQIGAVYNAVFD--VNLRLSPLLAASMNGHEDIVRLLLDNGADVNQQV 229
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: A0A8K1CNB4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNB4_PYTOL) HSP 1 Score: 73.9 bits (180), Expect = 6.370e-10 Identity = 72/248 (29.03%), Postives = 113/248 (45.56%), Query Frame = 1
Query: 445 VAADVDERGMWGNTPLLVATQYAYPQVALALIAAGANTRLENERQATALHFSCAEGLLDVGRALLEHGANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEVDRRVSPKRADGQDRRTSFSGTDGVGGSALTAAARYGHTETCFLLVDSGASVLLQDWDARTPLLHAILGGHAETSLALLDVAREARCARQLAGGASTTTGPSRLTPLHAACDNGMHTVVKALLAAGAQVESRD 1188
+ +D++ R G T ++VA + + + L+A GA+T E TAL+ + G + + + L++ GA VD V VTPL AA+ H ++V LL++RGA +DR+ S + +AL A + +LV GASV+++D TPL+ AI A+LD + +A T T +TPL AA + G H ++ LL GA +E D
Sbjct: 28 LISDLNCRNFDGWTAMMVAARQGHEDIVAFLLACGADTEAHKEGP-TALYLAATRGYVSIIKRLVDAGATVDTTVTEKQ-----------VTPLLAATMFRHADVVELLLDRGAVLDRQNSDLQ------------------TALHWAVDETNVAMIQVLVRRGASVVVRDTYRNTPLMVAIKHNDIVALTAILDTLKLHGEDSAIAAVLKTPTFDG-MTPLMAAANEGYHEILGQLLKYGAVLEDMD 244
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: UPI00201EC82C (uncharacterized protein LOC124152553 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EC82C) HSP 1 Score: 69.3 bits (168), Expect = 1.920e-8 Identity = 77/271 (28.41%), Postives = 111/271 (40.96%), Query Frame = 1
Query: 451 ADVDERGMWGNTPLLVATQYAYPQVALALIAAGANTRLENERQATALHFSCAEGLLDVGRALLEHGANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEV----DRR------------VSPKRADGQDRRTSFSGTDGVGGSALTAAARYGHTETCFLLVDSGASVLLQDWDARTPLLH-AILGGHAE-----TSLALLDVAREARCARQLAGGASTTTGPSRLTPLHAACDNGMHTVVKALLAAGAQVESRDGAG 1197
AD++ RG +G TPL+VA + + QV L+ GA+ L ++ + LH +C G +DV + +L +N + TPL A+ GH ++ LLV +GA+V D R V + + + G + L AA GH + LLV GA V L D R +LH A LGGH + S + D+ +C R TPL A +NG V L+ A V D G
Sbjct: 1596 ADINSRGRYGRTPLMVAAENGHRQVFDLLVREGADVTLVDDGRNNILHVACLGGHVDVVKYVLSQKVT-----------DINSRRQYGRTPLMVAAVKGHRQVFDLLVTQGADVTLVDDGRNNILHVACLGGHVDMVKYVLSQKIVDINSRGKHGRTPLMVAAENGHRQVFDLLVTRGAGVSLVD-QLRNNILHVACLGGHVDMAKYIVSQKVTDINSREQCGR---------------TPLMVAAENGHRQVFDLLVTESADVTLVDDDG 1839
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: UPI00201F6EA8 (ankyrin repeat domain-containing protein 50-like isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F6EA8) HSP 1 Score: 67.8 bits (164), Expect = 3.260e-8 Identity = 63/209 (30.14%), Postives = 92/209 (44.02%), Query Frame = 1
Query: 451 ADVDERGMWGNTPLLVATQYAYPQVALALIAAGANTRLENERQATALHFSCAEGLLDVGRALLEHGANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEV-----DRR------------------VSPKRADGQDRRTSFSGTDGVGGSALTAAARYGHTETCFLLVDSGASVLLQDWDARTPLLHAILGGHAE 1008
+D++ RG +G TPL+VA + + QV L+ GA+ L ++ LH +C G +D+ + +L VA ++ G TPL A+ GH ++ LLV GA+V DR+ +S K AD +G G + + AA GH + C LLV GA V L D L A LGGH +
Sbjct: 54 SDMNGRGQYGRTPLMVAAEKGHRQVFDLLVREGADVSLVDDDGNNILHMACIGGHVDMVKYVLSQR------VADINSRGQYGR-----TPLMVAAEKGHRQVFDLLVRGGADVSLVGVDRKNILHVACLGGHVDMVKYVLSQKVAD-------MNGRGTYGRTPVMMAAEKGHRQVCDLLVREGADVSLVGVDRNNILHMACLGGHVD 244
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: UPI001EB08346 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB08346) HSP 1 Score: 67.8 bits (164), Expect = 4.310e-8 Identity = 66/209 (31.58%), Postives = 95/209 (45.45%), Query Frame = 1
Query: 451 ADVDERGMWGNTPLLVATQYAYPQVALALIAAGANTRLENERQATALHFSCAEGLLDVGRALLEHGANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEV----DRR-------------------VSPKRADGQDRRTSFSGTDGVGGSALTAAARYGHTETCFLLVDSGASVLLQDWDARTPLLHAILGGHAE 1008
AD++ RG +G TPL+VA + Y QV L+ GA+ L ++ + LH +C G + + + +L VA ++ GG TPL A+ GH ++ LLV +GA V D R +S K AD +RR + G + L AA GH + LLV GA+V L D D T L LGG+ +
Sbjct: 522 ADINSRGKYGGTPLIVAAEMGYRQVFDLLVTQGADVSLVDDNRDNILHVACLGGHVGMVKYVLSLK------VADINSRGQYGG-----TPLIVAAEKGHRQVFDLLVTQGANVSLVDDNRNNILHVACLGGHVDMVKYVLSQKVAD-INRRGQY------GWTPLMVAAEKGHRQVFDLLVTQGANVSLVDDDGDTILHVVCLGGNVD 712
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Match: UPI00201E7565 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201E7565) HSP 1 Score: 67.8 bits (164), Expect = 5.190e-8 Identity = 63/209 (30.14%), Postives = 92/209 (44.02%), Query Frame = 1
Query: 451 ADVDERGMWGNTPLLVATQYAYPQVALALIAAGANTRLENERQATALHFSCAEGLLDVGRALLEHGANVDPPVAPVHHPAVNGGQTVPVTPLSAASSGGHTELVRLLVERGAEV-----DRR------------------VSPKRADGQDRRTSFSGTDGVGGSALTAAARYGHTETCFLLVDSGASVLLQDWDARTPLLHAILGGHAE 1008
+D++ RG +G TPL+VA + + QV L+ GA+ L ++ LH +C G +D+ + +L VA ++ G TPL A+ GH ++ LLV GA+V DR+ +S K AD +G G + + AA GH + C LLV GA V L D L A LGGH +
Sbjct: 736 SDMNGRGQYGRTPLMVAAEKGHRQVFDLLVREGADVSLVDDDGNNILHMACIGGHVDMVKYVLSQR------VADINSRGQYGR-----TPLMVAAEKGHRQVFDLLVRGGADVSLVGVDRKNILHVACLGGHVDMVKYVLSQKVAD-------MNGRGTYGRTPVMMAAEKGHRQVCDLLVREGADVSLVGVDRNNILHMACLGGHVD 926 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1025.381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1025.381.1 >prot_S-firma_F_contig1025.381.1 ID=prot_S-firma_F_contig1025.381.1|Name=mRNA_S-firma_F_contig1025.381.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=607bp MGCVSSKVGQRPPEHKPGHKAREDGRRGESRAVESRPAQPVVDSDGERKAback to top mRNA from alignment at S-firma_F_contig1025:4900..8556+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1025.381.1 ID=mRNA_S-firma_F_contig1025.381.1|Name=mRNA_S-firma_F_contig1025.381.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3657bp|location=Sequence derived from alignment at S-firma_F_contig1025:4900..8556+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1025:4900..8556+ >mRNA_S-firma_F_contig1025.381.1 ID=mRNA_S-firma_F_contig1025.381.1|Name=mRNA_S-firma_F_contig1025.381.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3642bp|location=Sequence derived from alignment at S-firma_F_contig1025:4900..8556+ (Sphaerotrichia firma ET2_F female)back to top |