Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 353 |
| Cds size | 351 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815531.109958-CDS-S-firma_F_contig10062:982..1333 | 1622815531.109958-CDS-S-firma_F_contig10062:982..1333 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig10062 983..1333 + |
| 1696949393.3744195-CDS-S-firma_F_contig10062:982..1333 | 1696949393.3744195-CDS-S-firma_F_contig10062:982..1333 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig10062 983..1333 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10062.131.1 >prot_S-firma_F_contig10062.131.1 ID=prot_S-firma_F_contig10062.131.1|Name=mRNA_S-firma_F_contig10062.131.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=117bp
VCLGEASPLCVLLSVDRCFPLRRPRLGPPPSARVARTHAACRFADCCRCA
SLLVRVLRIAILLYLRPRAHVFDFWLATIGFNRPTGTQESAICPCPMTSL
FRLSMGVNLGLSWPFDA back to topmRNA from alignment at S-firma_F_contig10062:983..1335+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-firma_F_contig10062.131.1 ID=mRNA_S-firma_F_contig10062.131.1|Name=mRNA_S-firma_F_contig10062.131.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=353bp|location=Sequence derived from alignment at S-firma_F_contig10062:983..1335+ (Sphaerotrichia firma ET2_F female)
GTTTGTTTGGGTGAAGCATCGCCATTGTGTGTCTTGCTTTCTGTAGATAG
ATGCTTCCCTTTGCGACGCCCGCGCCTTGGCCCCCCACCTAGCGCAAGGG
TTGCAAGGACCCACGCCGCGTGTCGTTTTGCGGATTGCTGCCGGTGCGCA
TCGTTGCTTGTGAGGGTGCTGAGGATCGCCATACTACTGTACCTGCGACC
GCGCGCACACGTTTTCGATTTCTGGTTGGCCACGATAGGCTTCAACAGGC
CTACGGGGACACAAGAAAGTGCGATTTGTCCGTGCCCCATGACATCGTTG
TTTCGCTTGAGTATGGGTGTCAATCTGGGTCTCTCGTGGCCATTCGACGC
ATA back to topCoding sequence (CDS) from alignment at S-firma_F_contig10062:983..1335+ >mRNA_S-firma_F_contig10062.131.1 ID=mRNA_S-firma_F_contig10062.131.1|Name=mRNA_S-firma_F_contig10062.131.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=702bp|location=Sequence derived from alignment at S-firma_F_contig10062:983..1335+ (Sphaerotrichia firma ET2_F female)
GTTTGTTTGGGTGAAGCATCGCCATTGTGTGTCTTGCTTTCTGTAGATAG
ATGCTTCCCTTTGCGACGCCCGCGCCTTGGCCCCCCACCTAGCGCAAGGG
TTGCAAGGACCCACGCCGCGTGTCGTTTTGCGGATTGCTGCCGGTGCGCA
TCGTTGCTTGTGAGGGTGCTGAGGATCGCCATACTACTGTACCTGCGACC
GCGCGCACACGTTTTCGATTTCTGGTTGGCCACGATAGGCTTCAACAGGC
CTACGGGGACACAAGAAAGTGCGATTTGTCCGTGCCCCATGACATCGTTG
TTTCGCTTGAGTATGGGTGTCAATCTGGGTCTCTCGTGGCCATTCGACGC
AGTTTGTTTGGGTGAAGCATCGCCATTGTGTGTCTTGCTTTCTGTAGATA
GATGCTTCCCTTTGCGACGCCCGCGCCTTGGCCCCCCACCTAGCGCAAGG
GTTGCAAGGACCCACGCCGCGTGTCGTTTTGCGGATTGCTGCCGGTGCGC
ATCGTTGCTTGTGAGGGTGCTGAGGATCGCCATACTACTGTACCTGCGAC
CGCGCGCACACGTTTTCGATTTCTGGTTGGCCACGATAGGCTTCAACAGG
CCTACGGGGACACAAGAAAGTGCGATTTGTCCGTGCCCCATGACATCGTT
GTTTCGCTTGAGTATGGGTGTCAATCTGGGTCTCTCGTGGCCATTCGACG
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