Homology
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
D7FN78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN78_ECTSI)
HSP 1 Score: 150 bits (379), Expect = 3.560e-41
Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 1
Query: 1 AVKKTRSKERARKTEYKAGREIVSKMSKKDPARPKGPQSSYILFYTEKVASARAARPDMSITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQLRTIARKAAAAAA 330
++ K +ERARK EYKAGRE+VSKMS+KD ARPKGPQSSYI+FYTEK+AS +AARP MSIT+I TAVGEAWR LSDE + PYTK+AE DR+RYE QLR IAR AA +AA
Sbjct: 328 SISKKLLEERARKAEYKAGRELVSKMSRKDSARPKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAIARSAATSAA 437
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
G8Y0V1_PICSO (Piso0_004944 protein n=2 Tax=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) TaxID=559304 RepID=G8Y0V1_PICSO)
HSP 1 Score: 62.0 bits (149), Expect = 2.790e-10
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 82 KKDPARPKGPQSSYILFYTEKVASARAARPDMSITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQLRTIARK 312
KKDP PK S+Y+ F E RA P +S ++G +GE W+ +S E ++PY +AE D++RYE + A+K
Sbjct: 13 KKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKAMSSEDKTPYETKAEADKKRYEKEKAEYAKK 89
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
A0A642UMP5_DIURU (HMG box domain-containing protein n=1 Tax=Diutina rugosa TaxID=5481 RepID=A0A642UMP5_DIURU)
HSP 1 Score: 60.5 bits (145), Expect = 1.090e-9
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 82 KKDPARPKGPQSSYILFYTEKVASARAARPDMSITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQLRTIARKAA 318
K+DP PK S+Y+ F E R+ P +S ++G +GE W+ L+ E+++PY +AE D++RYE + A+K A
Sbjct: 13 KRDPDAPKRSLSAYMFFANENRDVVRSENPGVSFGQVGKLLGEKWKALTSEEKTPYEAKAEADKKRYEKEKAEYAKKQA 91
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
A0A367Y0M0_9ASCO (Non-histone chromosomal protein 6 n=1 Tax=Candida viswanathii TaxID=5486 RepID=A0A367Y0M0_9ASCO)
HSP 1 Score: 60.5 bits (145), Expect = 1.090e-9
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 82 KKDPARPKGPQSSYILFYTEKVASARAARPDMSITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQLRTIARK 312
KKDP PK S+Y+ F E RA P ++ ++G +GE W+ L+ E ++PY +AE D++RYE + A+K
Sbjct: 13 KKDPDAPKRSLSAYMFFANENRDIVRAENPGITFGQVGKLLGEKWKALTPEDKTPYENKAEADKKRYEKEKSEYAKK 89
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
A0A1E3QVM9_9ASCO (HMG box domain-containing protein n=1 Tax=Babjeviella inositovora NRRL Y-12698 TaxID=984486 RepID=A0A1E3QVM9_9ASCO)
HSP 1 Score: 58.9 bits (141), Expect = 4.330e-9
Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 82 KKDPARPKGPQSSYILFYTEKVASARAARPDMSITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQ 291
KKDP PK S+Y+ F E RA P ++ ++G +GE W+ L+ E ++PY ++AE D++RYE Q
Sbjct: 10 KKDPNAPKRSLSAYMFFANENRDIVRAENPGVTFGQLGKLLGEKWKSLTPEDKTPYDQKAEKDKKRYEVQ 79
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
A0A1I8AHZ8_9BILA (Uncharacterized protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AHZ8_9BILA)
HSP 1 Score: 60.8 bits (146), Expect = 6.560e-9
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 73 KMSKKDPARPKGPQSSYILFYTEKVASARAARPDMSITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQLRT 300
K +KKDP PK S++ F +K + +A PD + ++ +G+ W+GLS+E RS Y K+A D+ RY ++RT
Sbjct: 87 KRTKKDPNAPKRALSAFFFFSHDKRSEVQAKHPDWKVGQVAQELGKFWKGLSEEDRSIYEKKAAEDKERYAEEMRT 162
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
NHP6_YARLI (Non-histone chromosomal protein 6 n=4 Tax=Yarrowia TaxID=4951 RepID=NHP6_YARLI)
HSP 1 Score: 57.8 bits (138), Expect = 1.620e-8
Identity = 26/70 (37.14%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 82 KKDPARPKGPQSSYILFYTEKVASARAARPDMSITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQ 291
KKDP PK S+Y+ F + + RA P ++ ++G A+GE W+ L+D ++ PY ++A D++RYE +
Sbjct: 19 KKDPNAPKRALSAYMFFANDNRDAIRADNPGIAFGQVGKALGEKWKTLTDAEKVPYEEKATADKKRYEDE 88
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
A0A6G1G513_9PEZI (Nucleosome binding protein n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1G513_9PEZI)
HSP 1 Score: 57.8 bits (138), Expect = 1.700e-8
Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 82 KKDPARPKGPQSSYILFYTEKVASARAARPDMSITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQ 291
KKDP PK S+Y+ F + R P + ++G A+GE W+ L+D+ ++PY +A+VD++RYE +
Sbjct: 20 KKDPNAPKRGLSAYMFFANDNRDKVREDNPGIKFGDVGKALGEKWKELTDKDKAPYEAKAKVDKKRYEDE 89
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
A0A1J1GM50_PLAGA (HMG box domain-containing protein n=27 Tax=Plasmodiidae TaxID=1639119 RepID=A0A1J1GM50_PLAGA)
HSP 1 Score: 55.8 bits (133), Expect = 8.260e-8
Identity = 27/83 (32.53%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 70 SKMSKKDPARPKGPQSSYILFYTEKVASARAARPDMS--ITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQLRTIARK 312
+K KKDP PK S+Y+ + +K +P+++ + ++G +GEAW LS ++SPY K+A++D+ RY ++ +K
Sbjct: 14 NKKKKKDPLAPKRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGKLSAAQKSPYEKKAQLDKARYSKEIEEYRKK 96
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Match:
A0A1I8CM22_9BILA (Uncharacterized protein n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8CM22_9BILA)
HSP 1 Score: 57.8 bits (138), Expect = 9.840e-8
Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 73 KMSKKDPARPKGPQSSYILFYTEKVASARAARPDMSITEIGTAVGEAWRGLSDEKRSPYTKRAEVDRRRYEGQLRTIARKAAA 321
K +KKDP PK S++ F E+ + A D + ++ +G+ W+GLS+E+RS Y KRA D+ RY ++++ +A+A
Sbjct: 87 KRAKKDPNAPKRALSAFFFFSNERRPEVQRAHTDWKVGQVAQELGKFWKGLSEEERSIYEKRASDDKERYAEEMKSFRGEASA 169
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10062.130.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90 )
Total hits: 25
0 1 Expect = 3.56e-41 / Id = 72.73 Expect = 2.79e-10 / Id = 38.96 Expect = 1.09e-9 / Id = 36.71 Expect = 1.09e-9 / Id = 37.66 Expect = 4.33e-9 / Id = 40.00 Expect = 6.56e-9 / Id = 38.16 Expect = 1.62e-8 / Id = 37.14 Expect = 1.70e-8 / Id = 37.14 Expect = 8.26e-8 / Id = 32.53 Expect = 9.84e-8 / Id = 34.94 Sequence D7FN78_ECTSI G8Y0V1_PICSO A0A642UMP5_DIURU A0A367Y0M0_9ASCO A0A1E3QVM9_9ASCO A0A1I8AHZ8_9BILA NHP6_YARLI A0A6G1G513_9PEZI A0A1J1GM50_PLAGA A0A1I8CM22_9BILA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10062.130.1
>prot_S-firma_F_contig10062.130.1 ID=prot_S-firma_F_contig10062.130.1|Name=mRNA_S-firma_F_contig10062.130.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=116bp
AVKKTRSKERARKTEYKAGREIVSKMSKKDPARPKGPQSSYILFYTEKVA back to top mRNA from alignment at S-firma_F_contig10062:13..980+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10062.130.1 ID=mRNA_S-firma_F_contig10062.130.1|Name=mRNA_S-firma_F_contig10062.130.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=968bp|location=Sequence derived from alignment at S-firma_F_contig10062:13..980+ (Sphaerotrichia firma ET2_F female)GCCGTGAAGAAGACCCGGTCGAAGGAGCGCGCCCGCAAGACGGAGTACAA
GGCCGGAAGGGAGATCGTGTCCAAGATGTCCAAGAAAGACCCGGCCAG GT
AGGTGACGGGGCGGCCACAGCTAGTGCACGCAGCGCCGAACCCTTGGTGC
ACACAGAATGTCGCGTACCGATGTCCTTGGCCACGATGGAGGCATAGATT
TCTGCCACGACCTTGTTGTGTTGCTGTTGTTGTTGTTCGTGTGGCGAAGC
CGGCTTATATTTAGCCAGGAGGTCGCCGAGCCTTGGTTAAAGTGGCAGGC
CACCGTATGAGAGGGCCTTGAGGCAAATGTGAGTATTCCCCTTTTTTGGA
CGTTCGTTTGTGGTGGTGGACATCATCATCATCGATACCAAGGCGGTTCG
ACCCCATGAACGAGTATGTATTTCTGTCTTCCATCACCATTTTCATACTG
TATTCCCCACTGCCCGGTGCAATCTCGGGGCTCTGGACACCTCTTGTGCT
GGCGTCTAGGCCGAAGGGCCCCCAGAGCTCGTACATCCTGTTCTACACGG
AGAAGGTGGCCTCCGCCAGGGCAGCGAGACCCGACATGAGCATCACG GTA
GGTCCTTGCGCCACTTCACCCCGCCGCCTTACATTGGCACGACTGAACCA
ACGCTTCAATTGTGGCAGTGCATACCATCGAGAGGAATGCTGTTGTTGTT
GTTAGCGGTGGTGGTGGTGGTGGTAGTGGTGGTGGTGGTGTGCTTGATGT
AAGCCCTTGCTGATTTAAATGGCGACCTTTGTACGAAAACGTCTTGCTTG
CGGCAGGAAATTGGGACGGCCGTGGGCGAGGCCTGGCGCGGTCTGTCCGA
CGAGAAAAGAAGCCCCTACACCAAGCGGGCCGAGGTCGACCGCAGGCGCT
ACGAGGGCCAACTGCGCACCATCGCGCGGAAGGCCGCCGCCGCCGCCGCC
GCTGCCCCCGCCCGTTGA back to top Coding sequence (CDS) from alignment at S-firma_F_contig10062:13..980+
>mRNA_S-firma_F_contig10062.130.1 ID=mRNA_S-firma_F_contig10062.130.1|Name=mRNA_S-firma_F_contig10062.130.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=696bp|location=Sequence derived from alignment at S-firma_F_contig10062:13..980+ (Sphaerotrichia firma ET2_F female) back to top