mRNA_S-firma_F_contig10015.76.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10015.76.1
Unique NamemRNA_S-firma_F_contig10015.76.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A7S4NR72_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NR72_GUITH)

HSP 1 Score: 170 bits (431), Expect = 2.340e-44
Identity = 113/333 (33.93%), Postives = 172/333 (51.65%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSF-------KPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQAR--QFVRVARIATASAGLRIPGF---LLPNLAYSTALALFHCERGDAGD------EGLAPPDGDTATTALLKALLMYPQCLIPLVE-FCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWL 942
            F   +  +Y+ AQE+F A ++T+DPQ+   LLH QPFH+DTLLQ+SE      + ++S+  L RA++VLEAAFHPSF       K  E   R+D     N+VLF VLFR +   G+ GC+R A E++K++L  +P+ DP+  L C+D+Y +++R  +FV V      +     P F    LPN  YS+ALA +  +     D        L   +  TA T L +AL  YP+ LI L+E  C +  S       GP            W ++L HP F+                        +++ +++ + ++FV R+++LWK + AL WL
Sbjct:  219 FELAYDADYIKAQESFLAMAATHDPQNIADLLHEQPFHLDTLLQMSEISAQMGEQQSSSDFLERAVYVLEAAFHPSFLAGMSGGKSGEERTRMDFDEEKNQVLFHVLFRQMHLVGRRGCNRTALELAKMILALSPLHDPLGILLCIDYYALRSRMFRFVLVLHEFYKTVPSSHPQFHVATLPNFLYSSALATWSMQTAGVRDATPDHISNLLQVEDQTANTKLQEALACYPEVLILLLEKACVVTHS-------GP------------WASILQHPHFARAR--------------------ESETSNMQNIINIFVERNITLWKTTTALQWL 512          
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: T0MC36_CAMFR (Transcription factor 25-like protein n=2 Tax=Camelus TaxID=9836 RepID=T0MC36_CAMFR)

HSP 1 Score: 153 bits (386), Expect = 4.270e-38
Identity = 113/342 (33.04%), Postives = 166/342 (48.54%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHC-ERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGL--NASTTGTGTVGPPGVPTVPASHC---TWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWLWGTATLATRAFDAWSVAPPATE 1008
            F +E SEEY   Q  F AA  + +P +  VLL   P+HVD+LLQLS+  R     E +  L+ RAL+ +E AFHP F      CR+D     N+  +  L++ +    K GC R A E  KL+L   P EDP+  L  VD   ++AR +  + R+       R     LPN A+S  LA F   ++ D  ++ L+    + A+  + +AL M+P  L+PL+E+CG+  +A+  G    GP      P+  C   TW   L+    +     V   W     S  L   PH+Q   L ++ S+++ R  SLWK+ A + WL        +A DA   A  A E
Sbjct:  161 FAFEHSEEYQQTQHKFLAAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQEDQEMARDLVERALYSMECAFHPLFSLTSGTCRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPLCMLLLVDHLALRARSYEYLIRLFQEWEAHRNLS-QLPNFAFSVPLAYFLLSQQADLAEQELSSTR-EMASLLIQQALTMFPGALMPLLEYCGVRPDAAVAGHRFFGP-DAEIRPSRLCLCGTWVAGLSSTREAWGPGHVGVCWATCLISASL---PHSQPPALSQLVSLYLGRSHSLWKEPATMSWLEENVHKVLQAVDAGDPAVEACE 496          
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A1Y1HYS6_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYS6_KLENI)

HSP 1 Score: 151 bits (381), Expect = 4.330e-37
Identity = 100/328 (30.49%), Postives = 150/328 (45.73%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIAT---ASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGD-----------TATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWL 942
            F Y +S +Y+  Q  F A ++T+DP +   L+ + P+H+D LL L++ Y+   +++    LL R L+  E A+HPSF      CRV     PN+  +  LFRH+Q  G+ GCHR A EV KL+L   P  DP  ALFCVD+Y +++ QF  + R+A    A   LR+    LPN A+S A+A F  E      +G +    D           T+   L +ALL++P  L  L+E   +   +                    W  +L  P+F+        G P                  LE +  +++ R   LW+   A  WL
Sbjct:  269 FKYTFSRDYLRTQHEFEALAATHDPNAIAHLVAQHPYHIDGLLTLADVYKQMGEMQTVAELLERCLYAFECAWHPSFNISLGTCRVPFEEEPNRAFYQALFRHMQHLGRRGCHRTALEVCKLVLSLDPEGDPAGALFCVDYYALRSEQFDYLERLADELDAERSLRV----LPNFAFSLAMARFRLEERQKSSKGASTSGNDAHGAENGGGGVTSLQLLEQALLLHPAMLQKLIEKTPIKEDSE-------------------WAKLLNAPVFA----KATAGGPT-----------------LEHLIDIYLERSHLLWRPQEAQDWL 552          
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A1X7V4B9_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V4B9_AMPQE)

HSP 1 Score: 145 bits (366), Expect = 3.330e-35
Identity = 81/226 (35.84%), Postives = 123/226 (54.42%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGLN 678
            F +E S+EY   Q +F  A  +YDP S   +LH  P+H+D+LLQLSE  +    ++ ++ L+ RAL+  E+ FHP F   +  CR++ +   N+  F VLF H+   G  GCHR AFE  K+L+   P  DP+  L  +D+Y ++A  +  +  +       R     LPN A+S  LA FH     + DE  A    + A   L  AL+M+P  L+PL++ CG++
Sbjct:  225 FNFEHSQEYQRVQFSFWDAVDSYDPNSIAAVLHAHPYHIDSLLQLSEVCKMGEDMQMASELIERALYSFESIFHPLFNYTQDNCRLNYSRAENRSFFLVLFHHINYVGTRGCHRTAFEFCKMLMSLDPETDPLCVLLMIDYYAVRACDYQFLIDMDKRWGAKRNLS-QLPNCAFSIPLAFFHQSLSLSEDEARAT-SLEEADQKLQAALIMFPSLLVPLLDKCGVH 448          
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A2T7NJU0_POMCA (Uncharacterized protein n=4 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NJU0_POMCA)

HSP 1 Score: 145 bits (365), Expect = 6.550e-35
Identity = 83/225 (36.89%), Postives = 122/225 (54.22%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGL 675
            F +E S +Y   Q  F  A  +Y+PQ+   ++H  P+H+D+L+QLSE +R +  ++ +  L+ RA+HV E AFHP F      CR+D     N+  F VLF+H+   G+ GC+R A E  KLLL   P  DP+  L  +DFY +++ Q+  + R+       R     LPN A+S  LA+FH     AG+        D     L  ALLM+P  L+PL+  CG+
Sbjct:  318 FTFEHSPQYQQVQFLFLDAVQSYNPQNIANIIHEHPYHIDSLIQLSEIFRMSEDLQTAVDLIERAIHVFEYAFHPLFNIATGNCRLDFRRQENRAFFLVLFKHLVNVGQRGCNRTALEFCKLLLNLDPDGDPLCVLLMIDFYALRSEQYTFLIRMYEEWESSRNL-LQLPNFAFSVPLAMFHL----AGENENYVQKADEM---LADALLMFPGLLMPLLNKCGI 534          
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A061S2X1_9CHLO (Transcription factor 25-like (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S2X1_9CHLO)

HSP 1 Score: 143 bits (360), Expect = 9.880e-35
Identity = 97/311 (31.19%), Postives = 144/311 (46.30%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAAL 933
            F +  S  Y   QEAF    ST++P +  +LL + PFHVD LL +S+ YR T +   S  +L R L+ LE+A+HP+F P    C++D     N+ +FT LFRH+    + GCH  AFE  KLLL      DP  AL  +D+  ++A++   + R      G      LLPN A+S ALA F   +   G+    PP+G +A   L++A+L++P  ++ ++            G +   GV         W ++L   LF G                         S  L  +  +FV R   +WK   AL
Sbjct:  167 FRFTHSAAYKSLQEAFKEVQSTFNPNNIAMLLQQHPFHVDALLAMSDLYRYTGEAAYSEEMLERCLYALESAWHPAFNPAAAACQLDYMDENNRPMFTALFRHMMNKSRQGCHATAFECCKLLL-AFDRSDPCGALQAIDYMALRAQKHEFLLRFVEEWDGAGTSLQLLPNFAFSAALATFGLSKDRPGE----PPEGPSAVQKLVQAVLLHPLVVVQVL------------GRLQEQGV----GRDAWWQSILQRGLFKGAS--------------------DGGSATLAHLIGIFVERQHLIWKAPEAL 436          
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A1S3IAH3_LINUN (transcription factor 25 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IAH3_LINUN)

HSP 1 Score: 144 bits (362), Expect = 1.100e-34
Identity = 85/226 (37.61%), Postives = 125/226 (55.31%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGLN 678
            F ++ S+EY   Q  F  A  +++P++   +L+ QP+H+D+LLQLS+  + +  ++ +  LL RAL   E  FHP F   +  CR+D     N+  +  LFRH+   GK GC+R A E  KLLL   P  DP+ AL  +DFY ++A QF  + R+       R     LPN A+S  LA+FH    +A  EG    D + A   L  +LLM+P  LIPL++ C +N
Sbjct:  231 FTFDHSKEYQRIQFQFLEAVESFNPENIVSVLNLQPYHIDSLLQLSDVCKMSEDMQMAAELLERALLCCEVNFHPLFSLTQGNCRLDYRRNENRGFYLALFRHLHFVGKRGCYRTALEFCKLLLSLDPEGDPLCALLMIDFYALRAEQFTLLIRMYQEWEAHRNLS-QLPNFAFSIPLAMFH----NANQEG---KDTEEADQMLQDSLLMFPGLLIPLLDKCSIN 448          
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: UPI001C4715F1 (transcription factor 25-like isoform X1 n=2 Tax=Homarus americanus TaxID=6706 RepID=UPI001C4715F1)

HSP 1 Score: 142 bits (359), Expect = 3.240e-34
Identity = 103/334 (30.84%), Postives = 154/334 (46.11%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQF---VRVARIATASAGLRIPGFLLPNLAYSTALALFHCERG---------------DAGDEGLAPPDG--DTATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWL 942
            F Y  S+ Y   Q  F  A  + +P++  +LL+ +PFHVDTLLQ+SE +R       +  L+ RAL+VLE+A HP F      CR+      N+ LF  LFRH+   GK GC+R A E+ KLLL  +P +DP+     +DFY ++A+++   V +  +   S  L     +LP+ AYS  LALFH   G                A  E L  P+     A T + +AL+M+P  L+PL++ C +                           V +HP F                + QL      QS  L ++ +++V R    WK++  + WL
Sbjct:  227 FKYVHSQSYQQLQFKFLEAVESLNPENIMMLLNPEPFHVDTLLQVSEIFRLGDDSAMAAQLIERALYVLESAGHPLFNIATGTCRLQYRQQENRSLFIALFRHILNVGKKGCYRTALELCKLLLNLSPDDDPLAVSLMIDFYALRAQEYEWLVALYDMYEPSKNLS----MLPSFAYSVPLALFHLSVGVDQSTQRDRRESIKAAALMEELGSPEEMRKRADTMIQRALIMFPGVLMPLLDKCNVQPDPV----------------------VASHPFFGP--------------TAQLN-----QSKGLSQIVNLYVGRCFHAWKEAGVVSWL 515          
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A6G0XK91_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK91_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.370e-34
Identity = 104/341 (30.50%), Postives = 150/341 (43.99%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQ--------------FVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDL-ERMASVFVTRHLSLWKQSAALVWLWGTATLATRAFD 978
            F  +WS EY   QE F     T+DPQS    LH+ P+HVD LLQ+SE ++   Q++ ST  + + ++ +E A+   F      CR+D     NK  +  LF  ++  G+ GC R+AFE+SKL+    P  DP+  L C+D+Y + ARQ               VR A+         I    LP L +S ALA F       GD+  A  D       L  AL  YP  L+PL+E CG+  +T                    W  V+   +F+                      PH     +  R+  ++VTRH SLWK +   V+L   AT A+  ++
Sbjct:  224 FQIDWSIEYKKMQEQFQILQMTHDPQSIVHFLHKHPYHVDALLQMSEVFQHHGQMDHSTDCIKKCVYFMELAWGEQFNVNSGHCRMDINMGDNKSFYRALFFLMRQVGRRGCVRSAFELSKLIWSMDPKGDPLHVLLCMDYYALAARQCQFIVDLFESNTEIVVRGAQSIAVKTSNPITVAELPGLQFSVALARFLL-----GDQERAVDD-------LATALAKYPSVLVPLIEKCGITTTTKA------------------WQDVICSAVFANA--------------------PHLDDGGIVARLLDIYVTRHASLWKVNDIQVFLLQAATKASARYN 514          
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: UPI001E6732FA (transcription factor 25-like isoform X1 n=2 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E6732FA)

HSP 1 Score: 141 bits (356), Expect = 8.150e-34
Identity = 103/334 (30.84%), Postives = 152/334 (45.51%), Query Frame = 1
Query:    1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQF---VRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEG-----------LAPPDGDT------ATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWL 942
            F Y  S+ Y   Q  F  A  + +P++   LL+ +PFHVDTLLQ+SE +R       +  L+ RAL+VLE A HP F      CR+      N+ LF  LFRH+   G+ GC+R A E+ KLLL  +P +DPM     +DFY ++A+++   V +  +   S  L     +LP+ +YS  LALFH   G     G           LA   G        A T + KAL+M+P  L+PL++ C +                 V ASH           F G    ++                  QS  L ++ +++V R   +WK++  + WL
Sbjct:  227 FKYVHSQTYQQFQFRFLEAVESLNPENIMTLLNHEPFHVDTLLQVSEIFRLGDDSAMAAQLIERALYVLETASHPLFNIATGVCRLQYRQQENRSLFIALFRHILNVGQKGCYRTALELCKLLLSLSPDDDPMAVSLMIDFYALRAQEYEWLVALYDMYEPSKNLS----MLPSFSYSVPLALFHLSVGGDQPSGRDKREAAKAAALAEELGSVEEMRKRADTMIQKALIMFPGVLMPLLDKCNIQPDP-------------VVASHA----------FFGPAAQIQ------------------QSKGLTQIVNLYVGRCYHVWKEAGVMTWL 515          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4NR72_GUITH2.340e-4433.93Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
T0MC36_CAMFR4.270e-3833.04Transcription factor 25-like protein n=2 Tax=Camel... [more]
A0A1Y1HYS6_KLENI4.330e-3730.49Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A1X7V4B9_AMPQE3.330e-3535.84Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A2T7NJU0_POMCA6.550e-3536.89Uncharacterized protein n=4 Tax=Pomacea canalicula... [more]
A0A061S2X1_9CHLO9.880e-3531.19Transcription factor 25-like (Fragment) n=2 Tax=Te... [more]
A0A1S3IAH3_LINUN1.100e-3437.61transcription factor 25 n=2 Tax=Lingula unguis Tax... [more]
UPI001C4715F13.240e-3430.84transcription factor 25-like isoform X1 n=2 Tax=Ho... [more]
A0A6G0XK91_9STRA3.370e-3430.50Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI001E6732FA8.150e-3430.84transcription factor 25-like isoform X1 n=2 Tax=Pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10015contigS-firma_F_contig10015:1617..2682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog181119.XP_005531952.1
Preferred nameTCF25
PFAMsTcf25
Max annot lvl33208|Metazoa
GOsGO:0000122,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0007275,GO:0007507,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045892,GO:0045934,GO:0048513,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0072359,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Evalue2.83e-32
EggNOG OGsKOG2422@1|root,KOG2422@2759|Eukaryota,38C0W@33154|Opisthokonta,3BFX6@33208|Metazoa,3CVZT@33213|Bilateria,484MD@7711|Chordata,49669@7742|Vertebrata,4GRC0@8782|Aves
DescriptionTranscription factor 25
COG categoryS
Hectar predicted targeting categoryother localisation
Exons2
Model size1008
Cds size981
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10015.76.1prot_S-firma_F_contig10015.76.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10015 1617..2655 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815525.291092-CDS-S-firma_F_contig10015:1616..25101622815525.291092-CDS-S-firma_F_contig10015:1616..2510Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10015 1617..2510 -
1696949387.999584-CDS-S-firma_F_contig10015:1616..25101696949387.999584-CDS-S-firma_F_contig10015:1616..2510Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10015 1617..2510 -
1622815525.3091295-CDS-S-firma_F_contig10015:2568..26551622815525.3091295-CDS-S-firma_F_contig10015:2568..2655Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10015 2569..2655 -
1696949388.0133228-CDS-S-firma_F_contig10015:2568..26551696949388.0133228-CDS-S-firma_F_contig10015:2568..2655Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10015 2569..2655 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815525.3216248-UTR-S-firma_F_contig10015:2655..26821622815525.3216248-UTR-S-firma_F_contig10015:2655..2682Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10015 2656..2682 -
1696949388.0230365-UTR-S-firma_F_contig10015:2655..26821696949388.0230365-UTR-S-firma_F_contig10015:2655..2682Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10015 2656..2682 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10015.76.1

>prot_S-firma_F_contig10015.76.1 ID=prot_S-firma_F_contig10015.76.1|Name=mRNA_S-firma_F_contig10015.76.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=327bp
MVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEAST
HLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGK
SGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATAS
AGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKAL
LMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLF
SGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSA
ALVWLWGTATLATRAFDAWSVAPPATE
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mRNA from alignment at S-firma_F_contig10015:1617..2682-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10015.76.1 ID=mRNA_S-firma_F_contig10015.76.1|Name=mRNA_S-firma_F_contig10015.76.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1066bp|location=Sequence derived from alignment at S-firma_F_contig10015:1617..2682- (Sphaerotrichia firma ET2_F female)
TTTGGGTACGAGTGGTCTGAGGAGTACATGGTTGCCCAGGAAGCGTTTGC GGCGGCCTCCAGCACGTACGACCCGCAGAGCTTCAACGTGCTGCTGCACC GGCAGCCCTTCCACGTCAGTGGCCCACCCGCGTCCGCCACCCCCACCCCC CTGCCAACCCCCATCCTCCCAGGTGGACACCCTGCTGCAGCTGTCGGAGT ACTACCGCGCAACAAGGCAAGTTGAGGCGTCCACCCACCTCCTCCACCGC GCCCTCCACGTCCTGGAGGCGGCCTTCCACCCATCGTTCAAGCCGTGGGA GTACCCGTGCCGCGTGGACCCCACCCCCATTCCCAACAAAGTCCTCTTCA CGGTCCTCTTTCGCCACGTGCAAACCACCGGCAAGTCGGGCTGCCACCGG GCGGCGTTTGAGGTGTCCAAGCTCCTCCTCCAGTGCGCCCCCGTGGAGGA CCCCATGCGGGCCCTCTTCTGCGTTGATTTCTACGGCATGCAAGCCCGCC AGTTCGTGCGGGTGGCCCGCATTGCCACGGCGTCTGCGGGGCTCCGTATC CCTGGCTTTTTGCTGCCCAACCTTGCGTACTCCACCGCGCTGGCGCTGTT CCACTGTGAACGGGGCGACGCTGGGGACGAAGGCCTAGCGCCCCCCGACG GCGACACCGCCACCACCGCCCTCCTGAAGGCGCTCCTCATGTACCCGCAG TGCTTGATCCCCTTGGTGGAGTTTTGTGGGCTGAACGCCTCCACGACGGG CACTGGGACGGTGGGGCCACCGGGCGTGCCCACCGTGCCCGCCTCCCACT GCACGTGGGGCACGGTGTTGACGCACCCCCTGTTTTCCGGGGTGGACTTC GACGTGCGTTGTGGCTGGCCTGTCGTGGCCTGGTCCCCCCAACTAACACA CTTCCCCCACACACAGAGTGACGACCTTGAGCGCATGGCGTCCGTGTTTG TGACACGGCACCTGTCGCTTTGGAAGCAGTCAGCGGCGTTGGTGTGGCTG TGGGGCACGGCGACTTTGGCCACCCGGGCATTCGACGCGTGGAGCGTGGC ACCACCCGCGACGGAG
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Coding sequence (CDS) from alignment at S-firma_F_contig10015:1617..2682-

>mRNA_S-firma_F_contig10015.76.1 ID=mRNA_S-firma_F_contig10015.76.1|Name=mRNA_S-firma_F_contig10015.76.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1962bp|location=Sequence derived from alignment at S-firma_F_contig10015:1617..2682- (Sphaerotrichia firma ET2_F female)
ATGGTTGCCCAGGAAGCGTTTGCGGCGGCCTCCAGCACGTACGACCCGCA
GAGCTTCAACGTGCTGCTGCACCGGCAGCCCTTCCACATGGTTGCCCAGG
AAGCGTTTGCGGCGGCCTCCAGCACGTACGACCCGCAGAGCTTCAACGTG
CTGCTGCACCGGCAGCCCTTCCACGTGGACACCCTGCTGCAGCTGTCGGA
GTACTACCGCGCAACAAGGCAAGTTGAGGCGTCCACCCACCTCCTCCACC
GCGCCCTCCACGTCCTGGAGGCGGCCTTCCACCCATCGTTCAAGCCGTGG
GAGTACCCGTGCCGCGTGGACCCCACCCCCATTCCCAACAAAGTCCTCTT
CACGGTCCTCTTTCGCCACGTGCAAACCACCGGCAAGTCGGGCTGCCACC
GGGCGGCGTTTGAGGTGTCCAAGCTCCTCCTCCAGTGCGCCCCCGTGGAG
GACCCCATGCGGGCCCTCTTCTGCGTTGATTTCTACGGCATGCAAGCCCG
CCAGTTCGTGCGGGTGGCCCGCATTGCCACGGCGTCTGCGGGGCTCCGTA
TCCCTGGCTTTTTGCTGCCCAACCTTGCGTACTCCACCGCGCTGGCGCTG
TTCCACTGTGAACGGGGCGACGCTGGGGACGAAGGCCTAGCGCCCCCCGA
CGGCGACACCGCCACCACCGCCCTCCTGAAGGCGCTCCTCATGTACCCGC
AGTGCTTGATCCCCTTGGTGGAGTTTTGTGGGCTGAACGCCTCCACGACG
GGCACTGGGACGGTGGGGCCACCGGGCGTGCCCACCGTGCCCGCCTCCCA
CTGCACGTGGGGCACGGTGTTGACGCACCCCCTGTTTTCCGGGGTGGACT
TCGACGTGCGTTGTGGCTGGCCTGTCGTGGCCTGGTCCCCCCAACTAACA
CACTTCCCCCACACACAGAGTGACGACCTTGAGCGCATGGCGTCCGTGTT
TGTGACACGGCACCTGTCGCTTTGGAAGCAGTCAGCGGCGTTGGTGTGGC
TGTGGGGCACGGCGACTTTGGCCACCCGGGCATTCGACGCGTGGAGCGTG
GCACCACCCGCGACGGAGGTGGACACCCTGCTGCAGCTGTCGGAGTACTA
CCGCGCAACAAGGCAAGTTGAGGCGTCCACCCACCTCCTCCACCGCGCCC
TCCACGTCCTGGAGGCGGCCTTCCACCCATCGTTCAAGCCGTGGGAGTAC
CCGTGCCGCGTGGACCCCACCCCCATTCCCAACAAAGTCCTCTTCACGGT
CCTCTTTCGCCACGTGCAAACCACCGGCAAGTCGGGCTGCCACCGGGCGG
CGTTTGAGGTGTCCAAGCTCCTCCTCCAGTGCGCCCCCGTGGAGGACCCC
ATGCGGGCCCTCTTCTGCGTTGATTTCTACGGCATGCAAGCCCGCCAGTT
CGTGCGGGTGGCCCGCATTGCCACGGCGTCTGCGGGGCTCCGTATCCCTG
GCTTTTTGCTGCCCAACCTTGCGTACTCCACCGCGCTGGCGCTGTTCCAC
TGTGAACGGGGCGACGCTGGGGACGAAGGCCTAGCGCCCCCCGACGGCGA
CACCGCCACCACCGCCCTCCTGAAGGCGCTCCTCATGTACCCGCAGTGCT
TGATCCCCTTGGTGGAGTTTTGTGGGCTGAACGCCTCCACGACGGGCACT
GGGACGGTGGGGCCACCGGGCGTGCCCACCGTGCCCGCCTCCCACTGCAC
GTGGGGCACGGTGTTGACGCACCCCCTGTTTTCCGGGGTGGACTTCGACG
TGCGTTGTGGCTGGCCTGTCGTGGCCTGGTCCCCCCAACTAACACACTTC
CCCCACACACAGAGTGACGACCTTGAGCGCATGGCGTCCGTGTTTGTGAC
ACGGCACCTGTCGCTTTGGAAGCAGTCAGCGGCGTTGGTGTGGCTGTGGG
GCACGGCGACTTTGGCCACCCGGGCATTCGACGCGTGGAGCGTGGCACCA
CCCGCGACGGAG
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