mRNA_S-firma_F_contig10015.76.1 (mRNA) Sphaerotrichia firma ET2_F female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A7S4NR72_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NR72_GUITH) HSP 1 Score: 170 bits (431), Expect = 2.340e-44 Identity = 113/333 (33.93%), Postives = 172/333 (51.65%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSF-------KPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQAR--QFVRVARIATASAGLRIPGF---LLPNLAYSTALALFHCERGDAGD------EGLAPPDGDTATTALLKALLMYPQCLIPLVE-FCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWL 942 F + +Y+ AQE+F A ++T+DPQ+ LLH QPFH+DTLLQ+SE + ++S+ L RA++VLEAAFHPSF K E R+D N+VLF VLFR + G+ GC+R A E++K++L +P+ DP+ L C+D+Y +++R +FV V + P F LPN YS+ALA + + D L + TA T L +AL YP+ LI L+E C + S GP W ++L HP F+ +++ +++ + ++FV R+++LWK + AL WL Sbjct: 219 FELAYDADYIKAQESFLAMAATHDPQNIADLLHEQPFHLDTLLQMSEISAQMGEQQSSSDFLERAVYVLEAAFHPSFLAGMSGGKSGEERTRMDFDEEKNQVLFHVLFRQMHLVGRRGCNRTALELAKMILALSPLHDPLGILLCIDYYALRSRMFRFVLVLHEFYKTVPSSHPQFHVATLPNFLYSSALATWSMQTAGVRDATPDHISNLLQVEDQTANTKLQEALACYPEVLILLLEKACVVTHS-------GP------------WASILQHPHFARAR--------------------ESETSNMQNIINIFVERNITLWKTTTALQWL 512
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: T0MC36_CAMFR (Transcription factor 25-like protein n=2 Tax=Camelus TaxID=9836 RepID=T0MC36_CAMFR) HSP 1 Score: 153 bits (386), Expect = 4.270e-38 Identity = 113/342 (33.04%), Postives = 166/342 (48.54%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHC-ERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGL--NASTTGTGTVGPPGVPTVPASHC---TWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWLWGTATLATRAFDAWSVAPPATE 1008 F +E SEEY Q F AA + +P + VLL P+HVD+LLQLS+ R E + L+ RAL+ +E AFHP F CR+D N+ + L++ + K GC R A E KL+L P EDP+ L VD ++AR + + R+ R LPN A+S LA F ++ D ++ L+ + A+ + +AL M+P L+PL+E+CG+ +A+ G GP P+ C TW L+ + V W S L PH+Q L ++ S+++ R SLWK+ A + WL +A DA A A E Sbjct: 161 FAFEHSEEYQQTQHKFLAAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQEDQEMARDLVERALYSMECAFHPLFSLTSGTCRLDYRRPENRSFYLALYKQMSFLEKRGCPRTALEYCKLILSLEPDEDPLCMLLLVDHLALRARSYEYLIRLFQEWEAHRNLS-QLPNFAFSVPLAYFLLSQQADLAEQELSSTR-EMASLLIQQALTMFPGALMPLLEYCGVRPDAAVAGHRFFGP-DAEIRPSRLCLCGTWVAGLSSTREAWGPGHVGVCWATCLISASL---PHSQPPALSQLVSLYLGRSHSLWKEPATMSWLEENVHKVLQAVDAGDPAVEACE 496
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A1Y1HYS6_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYS6_KLENI) HSP 1 Score: 151 bits (381), Expect = 4.330e-37 Identity = 100/328 (30.49%), Postives = 150/328 (45.73%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIAT---ASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGD-----------TATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWL 942 F Y +S +Y+ Q F A ++T+DP + L+ + P+H+D LL L++ Y+ +++ LL R L+ E A+HPSF CRV PN+ + LFRH+Q G+ GCHR A EV KL+L P DP ALFCVD+Y +++ QF + R+A A LR+ LPN A+S A+A F E +G + D T+ L +ALL++P L L+E + + W +L P+F+ G P LE + +++ R LW+ A WL Sbjct: 269 FKYTFSRDYLRTQHEFEALAATHDPNAIAHLVAQHPYHIDGLLTLADVYKQMGEMQTVAELLERCLYAFECAWHPSFNISLGTCRVPFEEEPNRAFYQALFRHMQHLGRRGCHRTALEVCKLVLSLDPEGDPAGALFCVDYYALRSEQFDYLERLADELDAERSLRV----LPNFAFSLAMARFRLEERQKSSKGASTSGNDAHGAENGGGGVTSLQLLEQALLLHPAMLQKLIEKTPIKEDSE-------------------WAKLLNAPVFA----KATAGGPT-----------------LEHLIDIYLERSHLLWRPQEAQDWL 552
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A1X7V4B9_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V4B9_AMPQE) HSP 1 Score: 145 bits (366), Expect = 3.330e-35 Identity = 81/226 (35.84%), Postives = 123/226 (54.42%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGLN 678 F +E S+EY Q +F A +YDP S +LH P+H+D+LLQLSE + ++ ++ L+ RAL+ E+ FHP F + CR++ + N+ F VLF H+ G GCHR AFE K+L+ P DP+ L +D+Y ++A + + + R LPN A+S LA FH + DE A + A L AL+M+P L+PL++ CG++ Sbjct: 225 FNFEHSQEYQRVQFSFWDAVDSYDPNSIAAVLHAHPYHIDSLLQLSEVCKMGEDMQMASELIERALYSFESIFHPLFNYTQDNCRLNYSRAENRSFFLVLFHHINYVGTRGCHRTAFEFCKMLMSLDPETDPLCVLLMIDYYAVRACDYQFLIDMDKRWGAKRNLS-QLPNCAFSIPLAFFHQSLSLSEDEARAT-SLEEADQKLQAALIMFPSLLVPLLDKCGVH 448
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A2T7NJU0_POMCA (Uncharacterized protein n=4 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NJU0_POMCA) HSP 1 Score: 145 bits (365), Expect = 6.550e-35 Identity = 83/225 (36.89%), Postives = 122/225 (54.22%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGL 675 F +E S +Y Q F A +Y+PQ+ ++H P+H+D+L+QLSE +R + ++ + L+ RA+HV E AFHP F CR+D N+ F VLF+H+ G+ GC+R A E KLLL P DP+ L +DFY +++ Q+ + R+ R LPN A+S LA+FH AG+ D L ALLM+P L+PL+ CG+ Sbjct: 318 FTFEHSPQYQQVQFLFLDAVQSYNPQNIANIIHEHPYHIDSLIQLSEIFRMSEDLQTAVDLIERAIHVFEYAFHPLFNIATGNCRLDFRRQENRAFFLVLFKHLVNVGQRGCNRTALEFCKLLLNLDPDGDPLCVLLMIDFYALRSEQYTFLIRMYEEWESSRNL-LQLPNFAFSVPLAMFHL----AGENENYVQKADEM---LADALLMFPGLLMPLLNKCGI 534
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A061S2X1_9CHLO (Transcription factor 25-like (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S2X1_9CHLO) HSP 1 Score: 143 bits (360), Expect = 9.880e-35 Identity = 97/311 (31.19%), Postives = 144/311 (46.30%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAAL 933 F + S Y QEAF ST++P + +LL + PFHVD LL +S+ YR T + S +L R L+ LE+A+HP+F P C++D N+ +FT LFRH+ + GCH AFE KLLL DP AL +D+ ++A++ + R G LLPN A+S ALA F + G+ PP+G +A L++A+L++P ++ ++ G + GV W ++L LF G S L + +FV R +WK AL Sbjct: 167 FRFTHSAAYKSLQEAFKEVQSTFNPNNIAMLLQQHPFHVDALLAMSDLYRYTGEAAYSEEMLERCLYALESAWHPAFNPAAAACQLDYMDENNRPMFTALFRHMMNKSRQGCHATAFECCKLLL-AFDRSDPCGALQAIDYMALRAQKHEFLLRFVEEWDGAGTSLQLLPNFAFSAALATFGLSKDRPGE----PPEGPSAVQKLVQAVLLHPLVVVQVL------------GRLQEQGV----GRDAWWQSILQRGLFKGAS--------------------DGGSATLAHLIGIFVERQHLIWKAPEAL 436
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A1S3IAH3_LINUN (transcription factor 25 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IAH3_LINUN) HSP 1 Score: 144 bits (362), Expect = 1.100e-34 Identity = 85/226 (37.61%), Postives = 125/226 (55.31%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQFVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGLN 678 F ++ S+EY Q F A +++P++ +L+ QP+H+D+LLQLS+ + + ++ + LL RAL E FHP F + CR+D N+ + LFRH+ GK GC+R A E KLLL P DP+ AL +DFY ++A QF + R+ R LPN A+S LA+FH +A EG D + A L +LLM+P LIPL++ C +N Sbjct: 231 FTFDHSKEYQRIQFQFLEAVESFNPENIVSVLNLQPYHIDSLLQLSDVCKMSEDMQMAAELLERALLCCEVNFHPLFSLTQGNCRLDYRRNENRGFYLALFRHLHFVGKRGCYRTALEFCKLLLSLDPEGDPLCALLMIDFYALRAEQFTLLIRMYQEWEAHRNLS-QLPNFAFSIPLAMFH----NANQEG---KDTEEADQMLQDSLLMFPGLLIPLLDKCSIN 448
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: UPI001C4715F1 (transcription factor 25-like isoform X1 n=2 Tax=Homarus americanus TaxID=6706 RepID=UPI001C4715F1) HSP 1 Score: 142 bits (359), Expect = 3.240e-34 Identity = 103/334 (30.84%), Postives = 154/334 (46.11%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQF---VRVARIATASAGLRIPGFLLPNLAYSTALALFHCERG---------------DAGDEGLAPPDG--DTATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWL 942 F Y S+ Y Q F A + +P++ +LL+ +PFHVDTLLQ+SE +R + L+ RAL+VLE+A HP F CR+ N+ LF LFRH+ GK GC+R A E+ KLLL +P +DP+ +DFY ++A+++ V + + S L +LP+ AYS LALFH G A E L P+ A T + +AL+M+P L+PL++ C + V +HP F + QL QS L ++ +++V R WK++ + WL Sbjct: 227 FKYVHSQSYQQLQFKFLEAVESLNPENIMMLLNPEPFHVDTLLQVSEIFRLGDDSAMAAQLIERALYVLESAGHPLFNIATGTCRLQYRQQENRSLFIALFRHILNVGKKGCYRTALELCKLLLNLSPDDDPLAVSLMIDFYALRAQEYEWLVALYDMYEPSKNLS----MLPSFAYSVPLALFHLSVGVDQSTQRDRRESIKAAALMEELGSPEEMRKRADTMIQRALIMFPGVLMPLLDKCNVQPDPV----------------------VASHPFFGP--------------TAQLN-----QSKGLSQIVNLYVGRCFHAWKEAGVVSWL 515
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: A0A6G0XK91_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK91_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.370e-34 Identity = 104/341 (30.50%), Postives = 150/341 (43.99%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQ--------------FVRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEGLAPPDGDTATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDL-ERMASVFVTRHLSLWKQSAALVWLWGTATLATRAFD 978 F +WS EY QE F T+DPQS LH+ P+HVD LLQ+SE ++ Q++ ST + + ++ +E A+ F CR+D NK + LF ++ G+ GC R+AFE+SKL+ P DP+ L C+D+Y + ARQ VR A+ I LP L +S ALA F GD+ A D L AL YP L+PL+E CG+ +T W V+ +F+ PH + R+ ++VTRH SLWK + V+L AT A+ ++ Sbjct: 224 FQIDWSIEYKKMQEQFQILQMTHDPQSIVHFLHKHPYHVDALLQMSEVFQHHGQMDHSTDCIKKCVYFMELAWGEQFNVNSGHCRMDINMGDNKSFYRALFFLMRQVGRRGCVRSAFELSKLIWSMDPKGDPLHVLLCMDYYALAARQCQFIVDLFESNTEIVVRGAQSIAVKTSNPITVAELPGLQFSVALARFLL-----GDQERAVDD-------LATALAKYPSVLVPLIEKCGITTTTKA------------------WQDVICSAVFANA--------------------PHLDDGGIVARLLDIYVTRHASLWKVNDIQVFLLQAATKASARYN 514
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Match: UPI001E6732FA (transcription factor 25-like isoform X1 n=2 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E6732FA) HSP 1 Score: 141 bits (356), Expect = 8.150e-34 Identity = 103/334 (30.84%), Postives = 152/334 (45.51%), Query Frame = 1 Query: 1 FGYEWSEEYMVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTHLLHRALHVLEAAFHPSFKPWEYPCRVDPTPIPNKVLFTVLFRHVQTTGKSGCHRAAFEVSKLLLQCAPVEDPMRALFCVDFYGMQARQF---VRVARIATASAGLRIPGFLLPNLAYSTALALFHCERGDAGDEG-----------LAPPDGDT------ATTALLKALLMYPQCLIPLVEFCGLNASTTGTGTVGPPGVPTVPASHCTWGTVLTHPLFSGVDFDVRCGWPVVAWSPQLTHFPHTQSDDLERMASVFVTRHLSLWKQSAALVWL 942 F Y S+ Y Q F A + +P++ LL+ +PFHVDTLLQ+SE +R + L+ RAL+VLE A HP F CR+ N+ LF LFRH+ G+ GC+R A E+ KLLL +P +DPM +DFY ++A+++ V + + S L +LP+ +YS LALFH G G LA G A T + KAL+M+P L+PL++ C + V ASH F G ++ QS L ++ +++V R +WK++ + WL Sbjct: 227 FKYVHSQTYQQFQFRFLEAVESLNPENIMTLLNHEPFHVDTLLQVSEIFRLGDDSAMAAQLIERALYVLETASHPLFNIATGVCRLQYRQQENRSLFIALFRHILNVGQKGCYRTALELCKLLLSLSPDDDPMAVSLMIDFYALRAQEYEWLVALYDMYEPSKNLS----MLPSFSYSVPLALFHLSVGGDQPSGRDKREAAKAAALAEELGSVEEMRKRADTMIQKALIMFPGVLMPLLDKCNIQPDP-------------VVASHA----------FFGPAAQIQ------------------QSKGLTQIVNLYVGRCYHVWKEAGVMTWL 515 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10015.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10015.76.1 >prot_S-firma_F_contig10015.76.1 ID=prot_S-firma_F_contig10015.76.1|Name=mRNA_S-firma_F_contig10015.76.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=327bp MVAQEAFAAASSTYDPQSFNVLLHRQPFHVDTLLQLSEYYRATRQVEASTback to top mRNA from alignment at S-firma_F_contig10015:1617..2682- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10015.76.1 ID=mRNA_S-firma_F_contig10015.76.1|Name=mRNA_S-firma_F_contig10015.76.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1066bp|location=Sequence derived from alignment at S-firma_F_contig10015:1617..2682- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10015:1617..2682- >mRNA_S-firma_F_contig10015.76.1 ID=mRNA_S-firma_F_contig10015.76.1|Name=mRNA_S-firma_F_contig10015.76.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1962bp|location=Sequence derived from alignment at S-firma_F_contig10015:1617..2682- (Sphaerotrichia firma ET2_F female)back to top |