Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 663 |
| Cds size | 663 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815525.2121525-CDS-S-firma_F_contig10012:864..1527 | 1622815525.2121525-CDS-S-firma_F_contig10012:864..1527 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig10012 865..1527 + |
| 1696949387.952367-CDS-S-firma_F_contig10012:864..1527 | 1696949387.952367-CDS-S-firma_F_contig10012:864..1527 | Sphaerotrichia firma ET2_F female | CDS | S-firma_F_contig10012 865..1527 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10012.74.1 >prot_S-firma_F_contig10012.74.1 ID=prot_S-firma_F_contig10012.74.1|Name=mRNA_S-firma_F_contig10012.74.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=221bp
RTSHTWAKSSRLSAAVLEHATTMAEEFEGQTPPPPSAGEPAAPAAEDQQG
LDPMDDGGGGSSPPPDAASIADSADAESAPAAAGDDPMDVAAAAADAGAS
DDAKGEGDGEEADADADSGEGGDGIENDDAGEGGDDADGDGEDASAAGAE
AVANGGGGGGDGDGGDPDAAQEDGAGDGATPEEDVPMGEAAAAAADGANA
EGEQQEEEEEESDSEVELEG* back to topmRNA from alignment at S-firma_F_contig10012:865..1527+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-firma_F_contig10012.74.1 ID=mRNA_S-firma_F_contig10012.74.1|Name=mRNA_S-firma_F_contig10012.74.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=663bp|location=Sequence derived from alignment at S-firma_F_contig10012:865..1527+ (Sphaerotrichia firma ET2_F female)
CGAACCTCACACACTTGGGCGAAGAGCTCTCGTCTCTCCGCTGCGGTGCT
AGAACACGCCACCACAATGGCGGAAGAATTCGAGGGCCAGACGCCCCCTC
CTCCTTCGGCCGGAGAGCCCGCGGCTCCCGCAGCCGAGGATCAGCAGGGG
CTAGACCCGATGGACGACGGGGGCGGGGGATCCTCCCCTCCGCCCGATGC
TGCCTCTATCGCTGACTCCGCTGACGCGGAATCGGCGCCGGCGGCTGCAG
GGGACGACCCTATGGATGTCGCCGCTGCAGCAGCTGATGCTGGTGCTAGT
GACGACGCCAAGGGCGAGGGCGACGGGGAGGAGGCCGATGCCGACGCCGA
CAGCGGGGAAGGCGGCGACGGCATTGAGAACGACGATGCCGGCGAGGGTG
GTGACGACGCCGACGGTGACGGGGAGGATGCCAGCGCCGCCGGCGCGGAA
GCTGTAGCGAACGGCGGGGGCGGGGGCGGGGACGGGGACGGTGGTGACCC
CGACGCGGCCCAAGAAGACGGAGCTGGAGATGGTGCCACCCCGGAAGAGG
ACGTGCCCATGGGCGAGGCGGCGGCGGCGGCGGCAGACGGGGCCAACGCC
GAGGGGGAGCAGCAGGAGGAAGAGGAGGAAGAGAGCGACTCCGAAGTGGA
GCTGGAAGGGTGA back to topCoding sequence (CDS) from alignment at S-firma_F_contig10012:865..1527+ >mRNA_S-firma_F_contig10012.74.1 ID=mRNA_S-firma_F_contig10012.74.1|Name=mRNA_S-firma_F_contig10012.74.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1326bp|location=Sequence derived from alignment at S-firma_F_contig10012:865..1527+ (Sphaerotrichia firma ET2_F female)
CGAACCTCACACACTTGGGCGAAGAGCTCTCGTCTCTCCGCTGCGGTGCT
AGAACACGCCACCACAATGGCGGAAGAATTCGAGGGCCAGACGCCCCCTC
CTCCTTCGGCCGGAGAGCCCGCGGCTCCCGCAGCCGAGGATCAGCAGGGG
CTAGACCCGATGGACGACGGGGGCGGGGGATCCTCCCCTCCGCCCGATGC
TGCCTCTATCGCTGACTCCGCTGACGCGGAATCGGCGCCGGCGGCTGCAG
GGGACGACCCTATGGATGTCGCCGCTGCAGCAGCTGATGCTGGTGCTAGT
GACGACGCCAAGGGCGAGGGCGACGGGGAGGAGGCCGATGCCGACGCCGA
CAGCGGGGAAGGCGGCGACGGCATTGAGAACGACGATGCCGGCGAGGGTG
GTGACGACGCCGACGGTGACGGGGAGGATGCCAGCGCCGCCGGCGCGGAA
GCTGTAGCGAACGGCGGGGGCGGGGGCGGGGACGGGGACGGTGGTGACCC
CGACGCGGCCCAAGAAGACGGAGCTGGAGATGGTGCCACCCCGGAAGAGG
ACGTGCCCATGGGCGAGGCGGCGGCGGCGGCGGCAGACGGGGCCAACGCC
GAGGGGGAGCAGCAGGAGGAAGAGGAGGAAGAGAGCGACTCCGAAGTGGA
GCTGGAAGGGTGACGAACCTCACACACTTGGGCGAAGAGCTCTCGTCTCT
CCGCTGCGGTGCTAGAACACGCCACCACAATGGCGGAAGAATTCGAGGGC
CAGACGCCCCCTCCTCCTTCGGCCGGAGAGCCCGCGGCTCCCGCAGCCGA
GGATCAGCAGGGGCTAGACCCGATGGACGACGGGGGCGGGGGATCCTCCC
CTCCGCCCGATGCTGCCTCTATCGCTGACTCCGCTGACGCGGAATCGGCG
CCGGCGGCTGCAGGGGACGACCCTATGGATGTCGCCGCTGCAGCAGCTGA
TGCTGGTGCTAGTGACGACGCCAAGGGCGAGGGCGACGGGGAGGAGGCCG
ATGCCGACGCCGACAGCGGGGAAGGCGGCGACGGCATTGAGAACGACGAT
GCCGGCGAGGGTGGTGACGACGCCGACGGTGACGGGGAGGATGCCAGCGC
CGCCGGCGCGGAAGCTGTAGCGAACGGCGGGGGCGGGGGCGGGGACGGGG
ACGGTGGTGACCCCGACGCGGCCCAAGAAGACGGAGCTGGAGATGGTGCC
ACCCCGGAAGAGGACGTGCCCATGGGCGAGGCGGCGGCGGCGGCGGCAGA
CGGGGCCAACGCCGAGGGGGAGCAGCAGGAGGAAGAGGAGGAAGAGAGCG
ACTCCGAAGTGGAGCTGGAAGGGTGA back to top
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