mRNA_S-firma_F_contig10000.61.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_S-firma_F_contig10000.61.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 5.060e-50
Identity = 114/252 (45.24%), Postives = 145/252 (57.54%), Query Frame = 3

Query:  522 MRTE-WVAKFVSGDGNCAWRALAYAMWGTDEYWVQLKLVILAWCVANTELLLAEGRALYDDTKFYPERIHREYGGFKEGDDVSTSD---HRFKMLIASVEYYTSDTVWGSDLTMLMASQALRITVKILHPMDKKSRDVYDAEGRQP--VHGTGRKVDKCEDYRHSQVFLPDDAALIYRGVGTGESTRLIEEAAVALTGGMTRASANELADIPEINRDSICRAGCHFAAVLSTDGRNVPFPVFKVAPPLTREL 1259
            MR E WVA +V GDGNC WR+LA  +W +DEYW QLKLV+LAW  A+ E L++EGR L D +  + + IH   G       V  +       +ML+ASV Y   DTVWG D T+L+ASQAL+ITVK+L P D   R   D     P  + G GRK DK +D R SQ FL DDA       G G   R++ EA V LT    +AS  EL ++ E+ + + C  G HFAAV   D    PFP+ + APPL + L
Sbjct:    1 MRKEGWVALWVRGDGNCCWRSLAKCLWESDEYWSQLKLVVLAWAAAHAEELVSEGRVLSDFSLHFSDDIHAGLGYAYSATCVGAAPSVAQTSRMLLASVAYDCEDTVWGGDFTLLLASQALKITVKLLSPNDVMVRK-RDESSATPGTIRGAGRKGDKVDDTRLSQTFLADDAVSCLHIQGGG---RMVAEATVVLTSCTGQASVGELDNLVEVTKSTACPRGVHFAAVSKKDRSTPPFPLVRAAPPLFQAL 248

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BLAST of mRNA_S-firma_F_contig10000.61.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 3.210e-39
Identity = 106/305 (34.75%), Postives = 155/305 (50.82%), Query Frame = 3

Query:  393 ITTNCTWRHVFDTPVGVLPLPLGREAEDARPYDYNATMIIPKTMRTEWVAKFVSGDGNCAWRALAYAMWGTDEYWVQLKLVILAWCVANTELLLAEGRALYDDTKF--YPERIHREYGGFKEGDDVSTSDHRF----KMLIASVEYYTSDTVWGSDLTMLMASQALRITVKILHPMDKKSR---DVYDAEGRQPVHGTGRKVDKCEDYRHSQVFLPDDAA--LIYRGVGTGESTRLIEEAAVALTGGMTRASAN-ELADIPEINRDSICRAGCHFAAVLSTDGR---NVPFPVFKVAPPLTRELD 1262
            I   CTW  VF TP GV+P  + R  +    YD  ATMI+   +R  +VA +V GDGNC WR++A A+WGTDEYW QLKL +LAW   N E L+ EG AL+       Y + IH ++     G D    DHR      ML+ S+  ++++  WG  L  ++ ++   + +K+ HP D ++R   D   A  +      G   D+  D+R+S   +P      +I RGV   E   ++EE A+ +    +    +  L+DIP I  D+      HFAA++  D       PFP+ K  PPL  + D
Sbjct:   56 IAAECTWPKVFGTPEGVVPT-VARPGKGQEMYDPKATMILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLAVLAWSAVNVEALVGEGGALFGRAGIIHYDDEIHAKH--IYRGPDGKV-DHRLDDDASMLLESIAKFSANRQWGGCLAGVLFTERTGLVLKMPHPFDMRARIRADTSGAAAKATASYGGGSEDEFGDHRYSFTKVPTAGRKEIILRGVSDEEDI-VVEEIAITMASYDSAVVGDGSLSDIPVIEADTNLNHLNHFAAIVCADPDVHVRRPFPMSKAGPPLHAKFD 355

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BLAST of mRNA_S-firma_F_contig10000.61.1 vs. uniprot
Match: A0A6H5JP78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP78_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 3.560e-37
Identity = 118/304 (38.82%), Postives = 152/304 (50.00%), Query Frame = 3

Query:  645 WCVANTELLLAEGRALYDDTKFYPERIHREYGGFKEG-DDVSTSDHRFKMLIASVEYYTSDTVWGSDLTMLMASQALRITVKILHPMDKKSRDVYDAEGR-QPVHGTGRKVD-KCEDYRHSQVFLPDDAALIYRGVGTGESTRLIEEAAVALTGGMTRASANELADIPEINRDSICRAGCHFAAVLSTDGRNVPFPVFKVAPPLTREL---------------DGRL------SKECDE---------ERAAYNRRRGIQPGSDEARAVAAXXXXXXXXXRQARKELSRANRQLALEERMRARQ 1457
            W  AN E L++ GR L D TK Y   IH  +       DD +T  ++ KMLIASV  ++    WG DLTML+ASQALRITVK++  +D  SR   +A    +   G+ RK +   ED RHSQ FLP DA    R VG G+ T  + EA V LT   T+ASA EL ++ E+ + + C  GC FAAV   D    PFP+ + APPL +                 D R+      +  CD          E+AA+    G+QPG + A A            RQARK  +  NRQL L E   ARQ
Sbjct:    9 WPAANAEDLVSRGRILSDFTKNYSSDIHGAFAVTANRLDDAATVANKSKMLIASVADFSKPACWGGDLTMLLASQALRITVKLVCSIDMMSRKRDEASATLETDRGSTRKDNINPEDNRHSQTFLPGDAVSSLR-VGGGDRT--VTEATVILTSSCTQASAGELDNLVEVTKATTCCTGCQFAAVSKKDRSTPPFPLVRAAPPLFQAWYQVPRRACCWVCARDDARMQLIFFAADPCDPPIPGAGREAEQAAHKASLGVQPGWEAAAAATRAAEEAAIARRQARKIKAVENRQLELAELANARQ 309

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_F_contig10000.61.1 vs. uniprot

BLAST of mRNA_S-firma_F_contig10000.61.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5K454_9PHAE	5.060e-50	45.24	SWIM-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JJS4_9PHAE	3.210e-39	34.75	SWIM-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JP78_9PHAE	3.560e-37	38.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]