prot_S-ischiensis_contig15.3791.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig15.3791.1
Unique Nameprot_S-ischiensis_contig15.3791.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length112
Homology
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BLAST of mRNA_S-ischiensis_contig15.3791.1 vs. uniprot
Match: D8LGD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD3_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.050e-13
Identity = 47/94 (50.00%), Postives = 61/94 (64.89%), Query Frame = 0 
Query:   10 STVYATRWRAFLRRSGRHYDSEAQIRKRLSLVRRAHRDAPVTNAEAFVALALAGGQAGEAAGLLHDERLRGEVLAVAAMMDVDAIMRAAAAAAE 103
            S  Y  RW  FL R+ RH+D EA +RKR+S++RRAH D  V+N  AFVALA + G++ EAA +LH  R + E   VA M+DV A +  A  AAE
Sbjct: 2028 SRQYLRRWEVFLSRAHRHFDGEADVRKRMSVIRRAHPD--VSNEVAFVALAQSRGRSSEAAAVLHLPRAKDEAALVAMMLDVTAFIGLAREAAE 2119
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BLAST of mRNA_S-ischiensis_contig15.3791.1 vs. uniprot
Match: A0A6H5KU38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU38_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 3.190e-12
Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 0 
Query:   10 STVYATRWRAFLRRSGRHYDSEAQIRKRLSLVRRAHRDAPVTNAEAFVALALAGGQAGEAAGLLHDERLRGEVLAVAAMMDVDAIMRAAAAAAE 103
            S  Y   W  FL R+ RH+D EA +RKR+S++RRAH D  V+N  AFVALA + G++ EAA +LH  R + E   VA M++V A +  A  AAE
Sbjct: 1976 SRQYLRMWEVFLSRAHRHFDGEADVRKRMSVIRRAHPD--VSNEVAFVALAQSRGRSSEAAAVLHLPRAKDEAALVAMMLNVTAFIGLAREAAE 2067
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig15.3791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGD3_ECTSI1.050e-1350.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU38_9PHAE3.190e-1247.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig15contigS-ischiensis_contig15:2150409..2152883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig15.3791.1mRNA_S-ischiensis_contig15.3791.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig15 2150409..2152883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig15.3791.1 ID=prot_S-ischiensis_contig15.3791.1|Name=mRNA_S-ischiensis_contig15.3791.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=112bp
AGSVARSGGSTVYATRWRAFLRRSGRHYDSEAQIRKRLSLVRRAHRDAPV
TNAEAFVALALAGGQAGEAAGLLHDERLRGEVLAVAAMMDVDAIMRAAAA
AAEAWQLRAVSS
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