prot_S-ischiensis_contig14.3415.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig14.3415.1
Unique Nameprot_S-ischiensis_contig14.3415.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length165
Homology
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BLAST of mRNA_S-ischiensis_contig14.3415.1 vs. uniprot
Match: A0A6H5JT44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT44_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.400e-11
Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = 0 
Query:    1 VEQRVTKLRELLQGGDVAAALSRSPALLLEDVSFTVRPRFLRLVFALRRMLTRE------QVTSMVLRCPQILLADVRGGVVPLVQFLSLVSDDLEDLGRRLLRDPYLLLVGLGPLSRVSFTLQLFRDGTMTASVPLQGA 134
            VE +V +LRELL G  VA  +S +P LLL DV   +RPR  RLV AL  +   +                           VP +Q++   + D ++L  RL RDP LL+VG+GPL+R+ +TL+  R+G+ + ++   GA
Sbjct:  534 VEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQYMLQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIALGNLGA 673
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JT44_9PHAE2.400e-1135.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 1..123
e-value: 9.2E-6
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig14contigS-ischiensis_contig14:2678640..2680659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig14.3415.1mRNA_S-ischiensis_contig14.3415.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig14 2678640..2680659 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig14.3415.1 ID=prot_S-ischiensis_contig14.3415.1|Name=mRNA_S-ischiensis_contig14.3415.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=165bp
VEQRVTKLRELLQGGDVAAALSRSPALLLEDVSFTVRPRFLRLVFALRRM
LTREQVTSMVLRCPQILLADVRGGVVPLVQFLSLVSDDLEDLGRRLLRDP
YLLLVGLGPLSRVSFTLQLFRDGTMTASVPLQGARTENGTGNATAEAIAA
ATTAAAAGAPPAATA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf