mRNA_S-ischiensis_contig14.3332.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: A0A6H5KGY0_9PHAE (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGY0_9PHAE) HSP 1 Score: 275 bits (703), Expect = 5.220e-86 Identity = 142/251 (56.57%), Postives = 174/251 (69.32%), Query Frame = 1
Query: 217 GGNEPQAVDSRPEDVESVRPVVSFPGGGIFFWWQAGAVTALQERYDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPLGLAGVWGPMVRDWLDELLPEDAALACKSRVHLLVLKLLPLP-RRYAVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSYRASREALSLGPDRPTVWLDFTDDEVMKQRGTEFLKLASIEGVQYMRQRGYEHVGHLEKEGALDAL 966
G N+ + S S +PV+SFPGGGIFFWWQAG ++ALQERY+LS +D VGASAG+LAA A+ LCD N+ IW RPLGLAGVWG MV DWLDELLP+DA + C+ RVHLLV+ + P P RR AVSDF K DL+ AC+AS HIPWFM++ FSAR RG R +DGS+RASRE LSLG RPTV+ D+ +DEVM R +FL L + EG+ +MRQRGY+HV + EG LD +
Sbjct: 59 GSNDEGIIASPAVLPSSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNE------IWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASREDLSLGDGRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDCI 303
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: A0A7S4C0Y1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0Y1_CHRCT) HSP 1 Score: 207 bits (528), Expect = 1.910e-60 Identity = 121/250 (48.40%), Postives = 163/250 (65.20%), Query Frame = 1
Query: 274 PVVSFPGGGIFFWWQAGAVTALQERYDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPL-GLAGVWGPMVRDWLDELLPEDAALACKSRVHLLVLKLLPLPRRY----AVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSYRASREALSLGPDR-----------PTVWLDFTDDEVMKQRGT---EFLKLASIEGVQYMRQRGYEHVGHLEKEGALDAL 966
P ++FPGGGIFFWWQAGAV AL ER+DL+RV VGASAGALAAT+A T D RA+D+A L D + ++DR GL GVWGPMVR+WLDELLP+DA + C+ RVH+LV ++ L Y +SD+R + DL+D LAS H+P F++ R++AR RG R +DGS LSL PD P V +D + D M++R + +FL+LAS +GV+ M + G +HV +E++GAL+ L
Sbjct: 38 PGLAFPGGGIFFWWQAGAVAALNERFDLARVPCVGASAGALAATIAATKVDPHRALDIAADLADRHG------VYDRGAWGLYGVWGPMVREWLDELLPKDADVMCRGRVHILVKRVPRLRHPYFEPVMLSDYRSRADLIDVNLASAHVPLFLDGRWTARLRGMRCVDGS-------LSLRPDSSLRRVVLPGRAPVVRIDSSGDLRMRERYSRREDFLRLASRDGVEEMLEWGVKHVAQMERDGALELL 274
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: A0A388K383_CHABU (Patatin n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K383_CHABU) HSP 1 Score: 210 bits (535), Expect = 7.190e-58 Identity = 122/252 (48.41%), Postives = 152/252 (60.32%), Query Frame = 1
Query: 271 RPVVSFPGGGIFFWWQAGAVTALQERYDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPLGLAGVWGPMVRDWLDELLPEDAALACKSRVHLLVLKLLPLPRRY------AVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSYRASREALSLGPDRPTVWLDFTDDEVMKQRGTEFLKL-ASIEGVQY-------MRQRGYEHVGHL---EKEGALDALPKK 975
RP++SF GGGIFF+WQ GA AL +DL + DM GASAGALAATLA D + A LA L DN ++WDRP GL G+WGPM+R WLDELLP +AA C R+H+ VL+L L RR V F K DL+DAC+AS HIP+F++ ARFR +DGS+ AS+ ++S PDRPTVW+D+ DDE + + FL L A EG Q M +G HV L K ALD + KK
Sbjct: 380 RPLLSFQGGGIFFYWQLGAARALSRHFDLDKADMAGASAGALAATLAACEVDAEEATKLAFQLSLDN------RVWDRPTGLGGIWGPMIRSWLDELLPPNAAQLCDGRLHIYVLELPSLRRRSPAFVRRGVCQFHSKRDLIDACMASVHIPFFIDGGACARFRDRWCVDGSFLASKHSISPYPDRPTVWVDYMDDEDLASQRLRFLSLGAQGEGPQRTWQWLLTMISKGEAHVEKLLSDHKLAALDPIRKK 625
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: A0A8J5XJD5_DIALT (PNPLA domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJD5_DIALT) HSP 1 Score: 193 bits (490), Expect = 8.380e-55 Identity = 107/217 (49.31%), Postives = 141/217 (64.98%), Query Frame = 1
Query: 274 PVVSFPGGGIFFWWQAGAVTALQERYDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPLGLAGVWGPMVRDWLDELLPEDAALACKSRVHLLVLKLLPLPRRYAVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSYRASREALSLGPD--RPTVWLDFTDDEVMKQRGTEFLKLASIEGVQYMRQRG 918
P+V+ GGGI FWWQAGA+ L+E+ L + +GASAG+LAA LA +G DMD A + A+ L +RA +W+RPLGLAGVWG +VR+WLD+LLP DAA + RV +LVL+ LP PRR S F K DL+D LASCHIP+F++ RFSARFR R +DGS+ SR D P ++LD D + +FL+L + EGV+ M + G
Sbjct: 35 PLVACTGGGILFWWQAGAIHGLREQCALDEANFIGASAGSLAAVLAASGVDMDDAFEHAITL----SKRA--NLWERPLGLAGVWGEIVREWLDDLLPADAAERARGRVTILVLRTLPFPRRVRFSAFESKSDLIDCALASCHIPYFLDGRFSARFRRARWIDGSFLTSRTRDFRHDDGSAPMLYLDPAADPNAPR---DFLRLRTPEGVRAMMESG 242
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: A0A7S0MNQ6_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MNQ6_9CRYP) HSP 1 Score: 190 bits (483), Expect = 1.700e-53 Identity = 106/225 (47.11%), Postives = 140/225 (62.22%), Query Frame = 1
Query: 274 PVVSFPGGGIFFWWQAGAVTALQERYDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPLGLAGVWGPMVRDWLDELLPEDAALACKSRVHLLVLKLLP-LP--RRYAVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSY----RASREALSLGPDRPTVWLDFTDDEVMKQRGTEFLKLASIEGVQYMRQRGYEH 927
P++ FPGGGI+FWWQAGAV ALQE Y L +DM GASAGAL A LA DMDRA +LA L D+N +W+RP GL G+WG M+R WL ELLP+DAA C RV + V L P +P RR +V DF K D++DACLAS HIP+F++ + +AR RG R +DGS R + G + + + + D + FL+ S+EG + + +RGY+H
Sbjct: 65 PLIVFPGGGIYFWWQAGAVKALQEMYTLDDLDMTGASAGALCAVLAGCNVDMDRAFELASRLADENG------VWERPQGLMGIWGGMIRQWLHELLPDDAARRCSGRVAISVTALSPAVPPLRRLSVDDFETKGDVIDACLASVHIPFFLDGKATARHRGARCVDGSLTFALRRTPWLFKPGDRQAALVVHQSHDAGLAGDRPGFLETLSLEGFRELYRRGYDH 283
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: A0A1Y1IDI1_KLENI (Patatin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDI1_KLENI) HSP 1 Score: 191 bits (486), Expect = 4.070e-53 Identity = 109/255 (42.75%), Postives = 148/255 (58.04%), Query Frame = 1
Query: 274 PVVSFPGGGIFFWWQAGAVTALQERYDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPLGLAGVWGPMVRDWLDELLPEDAALACKSRVHLLVLKLLPLP-----RRYAVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSYRASREALSLGPDRPTVWLDFTDDEVMKQRGTEFLKL--------ASIEGVQYMRQRGYEHVGHLEKEGALDALPKKKVKLEKKG 999
P++ FPGGG+FF+W G V LQ+ D++ M GASAGALA+ LA G DM RA + A L D K+WDR L LA VWG ++R WL +LLP++AA C R+HL VL+L L +R V+DF+ K DL+D LAS HIP F+N +RG R +DGS A R AL++ P R T+++D +D MK+RG FL+L + E + +M QRG EH + G L+ +K+E G
Sbjct: 124 PIICFPGGGMFFYWMIGVVNILQDEIDMTTAHMSGASAGALASVLAACGVDMRRAAEHAFQLSIDE------KLWDRKLKLALVWGRLIRQWLWDLLPDNAAELCNGRIHLFVLELPGLRTGLHCKRVPVTDFKDKADLIDCALASVHIPIFINGHIWTEYRGSRCVDGSINADRLALNIDPRRHTLYVDPYEDPEMKERGNRFLELYGDNPGPEGTWEWINHMMQRGEEHARRISSAGQLEPWTHSSLKMEAGG 372
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: A0A7S2IAY4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAY4_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.630e-51 Identity = 104/241 (43.15%), Postives = 146/241 (60.58%), Query Frame = 1
Query: 280 VSFPGGGIFFWWQAGAVTALQER-YDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPLGLAGVWGPMVRDWLDELLPEDAALACKSRVHLLVLKLLPLPRRYAVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSYRA---------SREALSLGPDRPTVWLDFTDDEVMKQRGTEFLKLASIEGVQYMRQRGYEHVGHLEKEGALDALPK 972
+ FPGGGIFF+WQAGA + L+E YDLS V M GASAGAL ATL T D D A LA++L ++ +W+RPLGL GVWGPM+ WL++LLPE+A R+ LLV + P R +S F KEDL+ +AS H+PWF++ + ++ FR H+DGS+RA + + LS D + LD+ D +MK + +F+ L S EG+ + +RG H ++K GA D +P+
Sbjct: 92 IIFPGGGIFFYWQAGAASYLREAGYDLSSVRMSGASAGALVATLTLTDVDFDEATRLALSLAEE------AGVWERPLGLQGVWGPMIETWLNDLLPENAVEMVDDRLSLLVTAI-PSFRTDRISSFNSKEDLVKCNMASVHLPWFLDGKLTSNFRDAPHVDGSFRAKPNDYFPELNGQELSEDDDSLII-LDWKADPIMKGKAKDFVTLTSKEGIWGLVERGRSHAKIMDKRGAFDGIPR 324
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: K0TQT9_THAOC (PNPLA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQT9_THAOC) HSP 1 Score: 180 bits (457), Expect = 4.360e-50 Identity = 110/257 (42.80%), Postives = 153/257 (59.53%), Query Frame = 1
Query: 217 GGNEPQAVDSRPEDVESVR-PVVSFPGGGIFFWWQAGAVTALQER-YDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPLGLAGVWGPMVRDWLDELLPEDAALACKSR-VHLLVLKLLPLPR--RYAVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSYRAS-REALS-LGPDRPTVWLDFTDDEVMKQRGTEFLKLASIEGVQYMRQRGYEHVGHLEKEGALDAL 966
G ++ A +SRP R P + FPGGG+FF+WQAG VT LQE YDLS M GASAGAL+ATLA TG A +LA+ + +N +W+RP+GL G+WG ++ DWLD LLP+DAAL +H+LV P+P + VS+F + DL+ A +AS H+PWF++ + FRG +DGS+ AS + LS DR + LDF D VMK + EF+K+ S + + + RG E+ +E+ G L
Sbjct: 19 GVSQAGAFESRPIHSREQRGPAIVFPGGGLFFYWQAGVVTHLQEAGYDLSAATMSGASAGALSATLAKTGVSPIDATELALHMSKENG------VWERPMGLQGIWGSIIEDWLDRLLPDDAALRVDDGCLHILVT---PVPSFGKSRVSNFEDRSDLIRANMASVHLPWFLDSNLTTHFRGRACIDGSFLASPSDYLSDRDQDRQRLVLDFKRDPVMKDKAGEFIKVVSPQAIWDILDRGKEYARIMERSGEFACL 266
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: A0A7S4JAL6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAL6_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.600e-48 Identity = 110/273 (40.29%), Postives = 156/273 (57.14%), Query Frame = 1
Query: 172 RLPQLSEFNLKGSQDGGNEPQAVDSRPEDVESVRPVVSFPGGGIFFWWQAGAVTALQER-YDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPLGLAGVWGPMVRDWLDELLPEDAALACKSRVHLLVLKLLPLPR--RYAVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSY--RASREALSLGPDRPTVWLDFTDDEVMKQRGT-EFLKLASIEGVQYMRQRGYEHVGHLEKEGALDALPK 972
R+P E L+ + +E S E P + FPGGGIFF+WQAGAVT L+E YDLS V M GASAGAL ATLA TG D A DLA+ + +WDRPLGL GVWG ++ WLD+LLP DA L +L + P+P + V+DFR + DL+ A +AS HIPWF++ + + R+R H+DGS+ +A+ + P + V LD+T D M + +F++ S EG+ + +RG + +E+ G ++LP+
Sbjct: 62 RIPSAEERRLQMATSSASESS---STSEGKRERAPQLIFPGGGIFFYWQAGAVTHLRESGYDLSSVSMSGASAGALTATLAATGVDFLDATDLALQFAQE------AGVWDRPLGLQGVWGSLIERWLDDLLPPDAHATANDGPGLQLL-VTPVPSFGKTKVTDFRDRSDLIRANMASIHIPWFLDGKLTTRYRDAEHIDGSFLSKATDYVTEVRP-KNVVRLDWTKDPAMSDKKLGDFVEALSKEGIWDLVERGKSYAALMEERGDFESLPR 323
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Match: A0A6U3R5T6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3R5T6_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.340e-48 Identity = 100/235 (42.55%), Postives = 141/235 (60.00%), Query Frame = 1
Query: 280 VSFPGGGIFFWWQAGAVTALQER-YDLSRVDMVGASAGALAATLAFTGADMDRAMDLAVALCDDNQRRAAIKIWDRPLGLAGVWGPMVRDWLDELLPEDAALACKSRVHLLVLKLLPLPRRYAVSDFRGKEDLMDACLASCHIPWFMNRRFSARFRGHRHLDGSYRASRE----ALSLGP-DRPTVWLDFTDDEVMKQRGTEFLKLASIEGVQYMRQRGYEHVGHLEKEGALDAL 966
+ FPGGGIFF+WQAGA + L+E YDLS V M GASAGALAATL D + A LA+ L +D +WDRPLGL GVWGPM+ WL++LLP++A R+ LLV + P R +S F KEDL+ +AS H+PWF++ + ++ FR +DGS+RA E + G D + LD+ D VM+ + +F+KL S EG+ + ++G + ++K G D +
Sbjct: 84 IIFPGGGIFFYWQAGAASYLREAGYDLSDVTMSGASAGALAATLTLADVDFEEATSLALKLAED------AGVWDRPLGLQGVWGPMIETWLNDLLPDNAVEMVDERLSLLVTSI-PSFRTDRISSFESKEDLVRCNMASVHLPWFLDGKLTSNFRQAPRIDGSFRAKTEDYFPQVKNGQVDDSLIILDWKSDPVMEGKTKDFIKLTSKEGIWDLLEQGRSYAQIMDKRGDFDTI 311 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig14.3332.1 >prot_S-ischiensis_contig14.3332.1 ID=prot_S-ischiensis_contig14.3332.1|Name=mRNA_S-ischiensis_contig14.3332.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=320bp MVRPAAFLAVCLIMLLVRRGSSLVSGPGLVSLRATQLLPSTRWRLPQLSEback to top mRNA from alignment at S-ischiensis_contig14:1944015..1956131+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig14.3332.1 ID=mRNA_S-ischiensis_contig14.3332.1|Name=mRNA_S-ischiensis_contig14.3332.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=12117bp|location=Sequence derived from alignment at S-ischiensis_contig14:1944015..1956131+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig14:1944015..1956131+ >mRNA_S-ischiensis_contig14.3332.1 ID=mRNA_S-ischiensis_contig14.3332.1|Name=mRNA_S-ischiensis_contig14.3332.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1920bp|location=Sequence derived from alignment at S-ischiensis_contig14:1944015..1956131+ (Schizocladia ischiensis KU_0333)back to top |