mRNA_S-ischiensis_contig14.3240.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig14.3240.1
Unique NamemRNA_S-ischiensis_contig14.3240.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: D7FWG5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWG5_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 3.560e-68
Identity = 164/378 (43.39%), Postives = 190/378 (50.26%), Query Frame = 1
Query:    1 MERHGFVILTDVGPVHQLYQDLAGELRAVGSAGVACGAMSSSAKEACTGAVHFNERGIPMWHVGYERCGATREAFRVEAGR----PDRAPWPSPSLRNAFLRLLRVVRRVCIRALRLSLGAGGAGPGGRLLDPPPEPACLSHPRGALAAVARGGEGG--------AGGVARPGEGVEEQETQGAVAAVAQXXXXXXXXXXXXXXXXXXXXQR-------RQXXXXXXXXXXXXXXXXDFSVCYALHYPNTEEEEEEQAPAVTSGDPDIAVGEHVDPSLFVAEPCSGVPGLEIQDAASGRWIEVEAACVGLKEEEATALDPELSEGQQLILFGGLALERATAGRVRAAPHRVRHGP-SRRVCFIYEQKFAEFFPARAID 1074
            MERHGFV+LT+ G +   Y +    L+A    G       S  KEA  G VHFNERGIPMWH GYE+CG  RE FR  A        R PWP P L  A+L +LR+++RVC RAL L+LG         +L  PP  A  S         +     G         G   R     EEQE +   AA A                     QR        +                DFSV YAL YPN     E   PA+   D  + VGEHVDPSLFVAEPC GV GLEI D ASG W+ VEA C GL  +   +L    +EG++LILFGG ALERAT GRV  APHRVR G   RR CFIYEQK+AEFFP  A+D
Sbjct:    1 MERHGFVVLTETGAIRDAYLEFMELLKAFFDGG-------SGWKEAFKGRVHFNERGIPMWHTGYEKCGIVREVFRAPASAFPPSSQRQPWPCPRLHRAWLAMLRLLQRVCHRALTLTLGRP-------VLGAPPAKAKKSRSTNRQGGASLKAVDGLLCERCPVCGSSLR-----EEQEPEKGNAAAAVRGEKGGGSSTGGMDGGACHRQRFACSAIQDETGDGCGRDSCDDDSHDDFSVSYALRYPN-----EFADPALEQED--LTVGEHVDPSLFVAEPCCGVEGLEICDRASGSWLPVEAVCAGLGSDGGRSL--AAAEGRELILFGGKALERATEGRVLGAPHRVRRGNLGRRHCFIYEQKYAEFFPPPALD 350          
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: A0A836CDG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG4_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.540e-45
Identity = 110/308 (35.71%), Postives = 135/308 (43.83%), Query Frame = 1
Query:  139 CTGAVHFNERGIPMWHVGYERCGATREAFRVEAGRPDRAPWPSPSLRNAFLRLLRVVRRVCIRALRLSLGAGGAGPGGRLLDPPPEPACLSHPRGALAAVARGGEGGAGGVARPGEGVEEQETQGAVAAVAQXXXXXXXXXXXXXXXXXXXXQRRQXXXXXXXXXXXXXXXXDFSVCYALHYPNTEEEEEEQAPAVTSGDPDIAVGEHVDPSLFVAEPCSGVPGLEIQDAASGRWIEVEAACVGLKEEEATALDPELSEGQQLILFGGLALERATAGRVRAAPHRVRHGPSRRVCFIYEQKFAEFFPA 1062
            C G ++FNERG+PMW  G+E+CG  R+AFR+ AG  DR  WP  +LR A+LRLLR+  R+C RAL L+LG          + PP                                                                    + +Q                DFSVCYAL YPN            T    ++ V EHVDPSLFV EPC GV GLE+ D  S  W+ VEA C                 G+ L+LFGG AL+ AT G +    HRVR GP RR CFIYEQK+ +FFPA
Sbjct:  119 CRGDIYFNERGVPMWQTGFEKCGEMRQAFRIHAGHADRQSWPDDALRAAWLRLLRMCERICDRALSLALGYP--------VTPP--------------------------------------------------------------------ENKQKH--------------DFSVCYALCYPND----------ATKYSEELNVTEHVDPSLFVVEPCCGVAGLEVLDTQSRAWVAVEAIC---------------RPGKDLVLFGGKALQEATDGAISGTLHRVRRGPRRRHCFIYEQKYDDFFPA 311          
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: A0A7S4DAX6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAX6_HETAK)

HSP 1 Score: 145 bits (367), Expect = 3.810e-36
Identity = 116/357 (32.49%), Postives = 148/357 (41.46%), Query Frame = 1
Query:    1 MERHGFVILTDVGPVHQLYQDLAGELRAVGSAGVACGAMSSSAKEACTGAVHFNERGIPMWHVGYERCGATREAFRVEAGRPDRAPWPSPS--LRNAFLRLLRVVRRVCIRALRLSLGAGGAGPGGRLLDPPPEPACLSHPRGALAAVARGGEGGAGGVARPGEGVEEQETQGAVAAVAQXXXXXXXXXXXXXXXXXXXXQRRQXXXXXXXXXXXXXXXXDFSVCYALHYPNTEEEEEEQAPAVTSGDPDIAVGEHVDPSLFVAEPCSGVPGLEIQDAASGRWIEVEAACVGLKEEEATALDPELSEGQQLILFGGLALERATAGRVRAAPHRVRH--GPSRRVCFIYEQKFAEFFP 1059
            ++RHGFV+LTD+G V   Y  L  E +                KE   G V+FNERG+PMW  GYER    REA R  A  P   PWP+ +  LR A+ +  + + ++  R L L+LGA  A               L++                         VEE +                                                  +FSVCYALHYPN E   +E            AV EH+DPSLFV EPCS V GLE+ D A+  WI VE  C               + G++L++F G AL  AT GRV    HRVR   G   R CFIYEQK+A ++P
Sbjct:   47 IQRHGFVVLTDIGIVENNYNALIAEFQNFIENN------DRQEKEKLKGPVYFNERGVPMWATGYERM-PMREAVRARAAAPHAQPWPASAGGLREAWEKTTKNLMQIADRCLLLTLGAEQA---------------LTYKE-----------------------VEEDD--------------------------------------------------NFSVCYALHYPNDESYPDE-----------FAVTEHIDPSLFVIEPCSNVDGLEVLDQATDTWISVEDLC---------------APGRELVVFTGKALGAATGGRVPGTRHRVRRSRGAVPRCCFIYEQKYAHYYP 282          
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: M4BI83_HYAAE (2OG-FeII_Oxy domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI83_HYAAE)

HSP 1 Score: 137 bits (346), Expect = 9.130e-34
Identity = 106/354 (29.94%), Postives = 144/354 (40.68%), Query Frame = 1
Query:    1 MERHGFVILTDVG-PVHQLYQDLAGELRAVGSAGVACGAMSSSAKEACTGA-VHFNERGIPMWHVGYERCGATREAFRVEAGRPDRAPWPSPSLRNAFLRLLRVVRRVCIRALRLSLGAGGAGPGGRLLDPPPEPACLSHPRGALAAVARGGEGGAGGVARPGEGVEEQETQGAVAAVAQXXXXXXXXXXXXXXXXXXXXQRRQXXXXXXXXXXXXXXXXDFSVCYALHYPNTEEEEEEQAPAVTSGDPDIAVGEHVDPSLFVAEPCSGVPGLEIQDAASGRWIEVEAACVGLKEEEATALDPELSEGQQLILFGGLALERATAGRVRAAPHRVRHGPSRRVCFIYEQKFAEFF 1056
            MERH FV+LTD+G P+ Q +  +  +     ++           K  CT   ++ NE G P W+ GYE   + R+ FRV  G   R  WPS   +  +L L R ++R+C RAL L++G           D  P     SH R                                                                              DFSVCY LHYPN+E   + +   V          EHVDPSL+V EP S V GL++ D +S +W++VE  CV                G++++LF G AL RAT GR+    HRVR  P RR C +YEQK+ E+F
Sbjct:    1 MERHSFVVLTDIGRPLEQTHDQVLDDFETFFASA------DEDWKNGCTSKHIYRNEHGKPFWYAGYEHT-SVRDCFRVACGDISRLVWPSSEFQTHWLSLQRHMQRICDRALSLTVG----------YDVEP-----SHAR---------------------------------------------------------------------------SDKDFSVCYGLHYPNSEGSGQSETENVF---------EHVDPSLYVVEPVSRVEGLDVYDQSSKQWLKVEKVCV---------------PGKEIVLFCGHALNRATRGRIPGTLHRVRRNPDRRFCIVYEQKYEEYF 233          
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: A0A1V9ZCM9_9STRA (2OG-FeII_Oxy domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCM9_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.250e-30
Identity = 108/358 (30.17%), Postives = 142/358 (39.66%), Query Frame = 1
Query:    1 MERHGFVILTDVGPVHQLYQDLAGELRAVGSAGVACGAMSSSAKEACTGA-VHFNERGIPMWHVGYERCGATREAFRVEAGRPDRAPWPSPSLRNAFLRLLRVVRRVCIRALRLSLGAGGAGPGGRLLDPPPEPACLSHPRGALAAVARGGEGGAGGVARPGEGVEEQETQGAVAAVAQXXXXXXXXXXXXXXXXXXXXQRRQXXXXXXXXXXXXXXXXDFSVCYALHYPNTEEEEEEQAPAVTSGDPDIAVGEHVDPSLFVAEPCSGVPGLEIQDAASGRWIEVEAACVGLKEEEATALDPELSEGQQLILFGGLALERATAGRVRAAPHRVRHGPSR----RVCFIYEQKFAEFFP 1059
            ME+H FV+LTD+G +  LY  L   + ++          +  AK+ACT + ++ NE   PMW+ GYER    RE FRV  G  +R  WPS +  +A+L L++  + +C ++L L+LG                                               VE    Q    A                                           D SVCY LHYPN E          T       V EHVDPSL+V EP + V GL++ D AS +WI  E  CV                 ++L+LF G AL+RAT  RV    HRV    S     R CFIYEQK+  FFP
Sbjct:   40 MEKHSFVVLTDIGKLKNLYLQLRDAMESLFQE-------NDQAKDACTSSYIYRNETKTPMWYAGYERS-RVRECFRVHTGELERLKWPSSTFESAWLTLMKKCQAICDKSLSLTLGYT---------------------------------------------VEPASAQKEAKA-------------------------------------------DLSVCYGLHYPNKEG---------TGQSDQENVFEHVDPSLYVIEPVTDVRGLDVFDQASQQWICAEDVCV---------------PHEELVLFCGKALQRATENRVPGTLHRVTRYESTMNIPRYCFIYEQKYESFFP 277          
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: A0A067CH22_SAPPC (2OG-FeII_Oxy domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH22_SAPPC)

HSP 1 Score: 127 bits (319), Expect = 2.900e-29
Identity = 107/357 (29.97%), Postives = 141/357 (39.50%), Query Frame = 1
Query:    1 MERHGFVILTDVGPVHQLYQDLAGELRAVGSAGVACGAMSSSAKEACTGA-VHFNERGIPMWHVGYERCGATREAFRVEAGRPDRAPWPSPSLRNAFLRLLRVVRRVCIRALRLSLGAGGAGPGGRLLDPPPEPACLSHPRGALAAVARGGEGGAGGVARPGEGVEEQETQGAVAAVAQXXXXXXXXXXXXXXXXXXXXQRRQXXXXXXXXXXXXXXXXDFSVCYALHYPNTEEEEEEQAPAVTSGDPDIAVGEHVDPSLFVAEPCSGVPGLEIQDAASGRWIEVEAACVGLKEEEATALDPELSEGQQLILFGGLALERATAGRVRAAPHRVRHGPSR----RVCFIYEQKFAEFF 1056
            ME+H F++LTD+G +  +Y DL  E++A             +AK+ACT + ++ NE   PMW+ GYER    RE FRV  G   R  WPSP+  + +L +++  + +C ++L L+LG                                        V R  EG                                                       D SVCY LHYPN          A T       V EHVDPSL+V EP + V GL++ D AS RW+  E  CV                 ++L+LF G AL RAT  RV    HRV    S     R C IYEQK+A FF
Sbjct:   70 MEKHSFIVLTDIGKLKNMYLDLRSEMQAFFE-------REDAAKDACTSSYIYRNETKTPMWYAGYERS-RVRECFRVHTGDMSRLVWPSPAFESTWLAMIQKCQAICDQSLSLTLGYR--------------------------------------VQRKDEG------------------------------------------------------EDLSVCYGLHYPNK---------AGTGQSDGENVFEHVDPSLYVIEPVTDVRGLDVFDQASQRWLCAEDVCV---------------PHEELVLFCGKALARATNDRVPGTLHRVTRYESTMNIPRYCVIYEQKYANFF 302          
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: A0A1V9YJ94_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJ94_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.650e-27
Identity = 104/358 (29.05%), Postives = 144/358 (40.22%), Query Frame = 1
Query:    1 MERHGFVILTDVGPVHQLYQDLAGELRAVGSAGVACGAMSSSAKEACTGA-VHFNERGIPMWHVGYERCGATREAFRVEAGRPDRAPWPSPSLRNAFLRLLRVVRRVCIRALRLSLGAGGAGPGGRLLDPPPEPACLSHPRGALAAVARGGEGGAGGVARPGEGVEEQETQGAVAAVAQXXXXXXXXXXXXXXXXXXXXQRRQXXXXXXXXXXXXXXXXDFSVCYALHYPNTEEEEEEQAPAVTSGDPDIAVGEHVDPSLFVAEPCSGVPGLEIQDAASGRWIEVEAACVGLKEEEATALDPELSEGQQLILFGGLALERATAGRVRAAPHRV-RHGPSR---RVCFIYEQKFAEFFP 1059
            ME+H FV+LTD+G +  +Y  L  E++A           ++ AK+A T + ++ NE   PMW+ GYER    RE FRV  G   R  WPSP+    ++   +  + +C ++L L+LG                                             E  +EQ   GA                                              D SV Y LHYPN E          T    D  V EHVDPSL+V EP + V GL++ D A+ +W+  E  CV                 ++L+LF G AL RAT  R+    HRV R+  +R   R CFIYEQK++ +FP
Sbjct:   70 MEKHSFVVLTDLGKLKDMYLSLRTEMQAFFET-------ATEAKDAHTSSYIYRNETKTPMWYAGYERS-RVRECFRVHTGDTSRISWPSPAFEKTWVSYTKKCQAICDKSLSLTLGYTV------------------------------------------ESADEQRAAGA----------------------------------------------DLSVAYGLHYPNQEG---------TGQSVDENVFEHVDPSLYVVEPVTDVRGLDVFDQATQQWLCAEDVCV---------------PHEELVLFCGKALARATDERIAGTLHRVTRYDSTRDVPRYCFIYEQKYSPYFP 307          
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: A0A484DQY2_BRELC (2OG-FeII_Oxy domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQY2_BRELC)

HSP 1 Score: 107 bits (267), Expect = 4.060e-22
Identity = 57/134 (42.54%), Postives = 76/134 (56.72%), Query Frame = 1
Query:  655 DFSVCYALHYPNTEEEEEEQAPAVTSGDPDIAVGEHVDPSLFVAEPCSGVPGLEIQDAASGRWIEVEAACVGLKEEEATALDPELSEGQQLILFGGLALERATAGRVRAAPHRVRHGPSRRVCFIYEQKFAEFF 1056
            DFSVCY LHYPN+E   + +   +          EHVDPSL+V EP S V GL++ D  + +W++VE  CV                G++++LF G AL RAT GR+    HRVR  P RR C +YEQK+ E+F
Sbjct:  202 DFSVCYGLHYPNSEGSGQSEKENIF---------EHVDPSLYVVEPVSSVEGLDVYDQHAKQWLQVEKVCV---------------PGKEIVLFCGHALNRATKGRILGTLHRVRRTPKRRFCILYEQKYEEYF 311          
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: W2G4G5_PHYPR (2OG-FeII_Oxy domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2G4G5_PHYPR)

HSP 1 Score: 72.4 bits (176), Expect = 2.920e-10
Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 1
Query:    1 MERHGFVILTDVGP-VHQLYQDLAGELRAVGSAGVACGAMSSSAKEACTGA-VHFNERGIPMWHVGYERCGATREAFRVEAGRPDRAPWPSPSLRNAFLRLLRVVRRVCIRALRLSLG 348
            MERH FV+LTD+G  +   +  +  E  A  ++           K  CT   V+ NE G P W+ GYE   + R+ FRV  G   R  WPSP  +  +L L R ++R+C RAL L++G
Sbjct:   75 MERHSFVVLTDLGEKLEGTHDQVLQEFEAFFTSD------DEDWKNGCTSKHVYLNEHGKPFWYAGYEHT-SVRDCFRVACGDMSRLVWPSPEFKKHWLSLQRRMQRICDRALSLTVG 185          
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Match: A0A329SZJ4_9STRA (2OG-FeII_Oxy domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZJ4_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.760e-9
Identity = 42/118 (35.59%), Postives = 61/118 (51.69%), Query Frame = 1
Query:    1 MERHGFVILTDVGP-VHQLYQDLAGELRAVGSAGVACGAMSSSAKEACTGA-VHFNERGIPMWHVGYERCGATREAFRVEAGRPDRAPWPSPSLRNAFLRLLRVVRRVCIRALRLSLG 348
            MERH FV+LTD+G  + + +  +  +     ++           K  CT   V+ NE G P W+ GYE   + R+ FRV  G   R  WPSP     +L L R ++R+C RAL L++G
Sbjct:   78 MERHSFVVLTDLGENLERTHDQVLQDFETFFTSD------DEDWKNGCTSKHVYLNEHGKPFWYAGYEHT-SVRDCFRVACGDMSRLVWPSPEFEKHWLSLQRRMQRICDRALSLTVG 188          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FWG5_ECTSI3.560e-6843.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDG4_9STRA1.540e-4535.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DAX6_HETAK3.810e-3632.49Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
M4BI83_HYAAE9.130e-3429.942OG-FeII_Oxy domain-containing protein n=1 Tax=Hya... [more]
A0A1V9ZCM9_9STRA1.250e-3030.172OG-FeII_Oxy domain-containing protein n=1 Tax=Thr... [more]
A0A067CH22_SAPPC2.900e-2929.972OG-FeII_Oxy domain-containing protein n=2 Tax=Sap... [more]
A0A1V9YJ94_9STRA2.650e-2729.05Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A484DQY2_BRELC4.060e-2242.542OG-FeII_Oxy domain-containing protein n=1 Tax=Bre... [more]
W2G4G5_PHYPR2.920e-1037.292OG-FeII_Oxy domain-containing protein n=8 Tax=Phy... [more]
A0A329SZJ4_9STRA1.760e-935.592OG-FeII_Oxy domain-containing protein n=1 Tax=Phy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig14contigS-ischiensis_contig14:993418..996069 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score240.4
Seed ortholog evalue1.3e-60
Seed eggNOG ortholog2880.D7FWG5
EggNOG OGs29HEZ@1,2RQMK@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionIsopenicillin N synthase-like
Ec32 orthologEc-07_007420.1
Exons6
Model size1623
Cds size1077
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815713.634783-CDS-S-ischiensis_contig14:993417..9934981622815713.634783-CDS-S-ischiensis_contig14:993417..993498Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 993418..993498 +
1695739869.1321077-CDS-S-ischiensis_contig14:993417..9934981695739869.1321077-CDS-S-ischiensis_contig14:993417..993498Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 993418..993498 +
1622815713.6504045-CDS-S-ischiensis_contig14:993576..9936751622815713.6504045-CDS-S-ischiensis_contig14:993576..993675Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 993577..993675 +
1695739869.142872-CDS-S-ischiensis_contig14:993576..9936751695739869.142872-CDS-S-ischiensis_contig14:993576..993675Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 993577..993675 +
1622815713.670815-CDS-S-ischiensis_contig14:994015..9945671622815713.670815-CDS-S-ischiensis_contig14:994015..994567Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 994016..994567 +
1695739869.1510284-CDS-S-ischiensis_contig14:994015..9945671695739869.1510284-CDS-S-ischiensis_contig14:994015..994567Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 994016..994567 +
1622815713.6845853-CDS-S-ischiensis_contig14:994627..9947341622815713.6845853-CDS-S-ischiensis_contig14:994627..994734Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 994628..994734 +
1695739869.1607969-CDS-S-ischiensis_contig14:994627..9947341695739869.1607969-CDS-S-ischiensis_contig14:994627..994734Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 994628..994734 +
1622815713.6953359-CDS-S-ischiensis_contig14:995165..9951981622815713.6953359-CDS-S-ischiensis_contig14:995165..995198Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 995166..995198 +
1695739869.1712863-CDS-S-ischiensis_contig14:995165..9951981695739869.1712863-CDS-S-ischiensis_contig14:995165..995198Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 995166..995198 +
1622815713.7050436-CDS-S-ischiensis_contig14:995318..9955231622815713.7050436-CDS-S-ischiensis_contig14:995318..995523Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 995319..995523 +
1695739869.1791344-CDS-S-ischiensis_contig14:995318..9955231695739869.1791344-CDS-S-ischiensis_contig14:995318..995523Schizocladia ischiensis KU_0333CDSS-ischiensis_contig14 995319..995523 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815713.717431-UTR-S-ischiensis_contig14:995523..9960691622815713.717431-UTR-S-ischiensis_contig14:995523..996069Schizocladia ischiensis KU_0333UTRS-ischiensis_contig14 995524..996069 +
1695739869.1871808-UTR-S-ischiensis_contig14:995523..9960691695739869.1871808-UTR-S-ischiensis_contig14:995523..996069Schizocladia ischiensis KU_0333UTRS-ischiensis_contig14 995524..996069 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig14.3240.1prot_S-ischiensis_contig14.3240.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig14 993418..995523 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig14.3240.1

>prot_S-ischiensis_contig14.3240.1 ID=prot_S-ischiensis_contig14.3240.1|Name=mRNA_S-ischiensis_contig14.3240.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=359bp
MERHGFVILTDVGPVHQLYQDLAGELRAVGSAGVACGAMSSSAKEACTGA
VHFNERGIPMWHVGYERCGATREAFRVEAGRPDRAPWPSPSLRNAFLRLL
RVVRRVCIRALRLSLGAGGAGPGGRLLDPPPEPACLSHPRGALAAVARGG
EGGAGGVARPGEGVEEQETQGAVAAVAQGGGGGAGVAGPGEGVEEQETQR
RQQQQQRQEEEDEEDAEDDFSVCYALHYPNTEEEEEEQAPAVTSGDPDIA
VGEHVDPSLFVAEPCSGVPGLEIQDAASGRWIEVEAACVGLKEEEATALD
PELSEGQQLILFGGLALERATAGRVRAAPHRVRHGPSRRVCFIYEQKFAE
FFPARAID*
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mRNA from alignment at S-ischiensis_contig14:993418..996069+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig14.3240.1 ID=mRNA_S-ischiensis_contig14.3240.1|Name=mRNA_S-ischiensis_contig14.3240.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2652bp|location=Sequence derived from alignment at S-ischiensis_contig14:993418..996069+ (Schizocladia ischiensis KU_0333)
ATGGAAAGGCACGGATTCGTCATCCTCACGGACGTGGGGCCCGTGCACCA GCTCTACCAGGACCTGGCGGGGGAACTACGAGTCTTTTTCCACGGCGGGG CCAGGGCCGCCGGCGGCGGCGGCGGCGCGGGCATGGACGGGGGAGAGAGC AAGGGCGAGGCGGTCGGCTCTGCTGGCGTGGCCTGCGGTGCCATGTCCTC CTCCGCTAAGGAGGCATGCACAGGGGCGGTGCACTTCAACGAACGTGGCA TACCCATGGTGAGCAGTGATGGAATATCTAAGCAAATCAACCCAGTTGTC GAGTACTCATCTACTCGTATATATACTTATATGAAGTATATATATCAATA GTTGATGTTCGATAGCATGAGCCACACTAAATCCAAGTATTACAAGTAAC AACACGGGGCGAGGTGTAGGCCACGTCATGAGAGACCTCAACAGTGGCCC TTCCTTAGCTCGCCAGGGGAAAGTTTGGTGGGGAAGGGGAGGTGGAGGGG GAGTAGTTAGTAACGCCACCCACAAAATCAGTCGAGCCCGATAGCTATCC ACTAGCTGATAATTCCGTCACTGCCATCCGTCCGTCCGTTTGCCGCAGTG GCACGTCGGGTACGAGCGCTGCGGCGCCACCCGAGAGGCCTTCAGAGTAG AGGCGGGCCGCCCCGACCGTGCCCCGTGGCCCTCCCCCTCTCTCAGAAAC GCCTTCCTACGGCTGCTTCGCGTAGTCCGCCGCGTGTGCATCCGTGCCCT GCGCCTGTCGCTGGGGGCGGGGGGGGCGGGGCCGGGCGGGCGCCTCCTCG ACCCACCGCCAGAGCCCGCTTGCCTGTCCCATCCTCGGGGGGCGCTGGCG GCGGTGGCGCGAGGGGGCGAGGGTGGGGCGGGGGGGGTGGCTAGGCCAGG GGAGGGGGTAGAGGAGCAGGAGACGCAGGGGGCAGTAGCGGCTGTGGCGC AAGGAGGCGGGGGTGGGGCGGGGGTGGCTGGGCCAGGGGAGGGGGTAGAG GAGCAGGAGACGCAGCGGCGACAGCAGCAGCAGCAGCGGCAGGAGGAGGA GGATGAGGAAGATGCCGAGGACGACTTCTCCGTGTGCTACGCGCTGCACT ACCCCAACACGGAGGAGGAGGAGGAGGAGCAAGCGCCAGCAGTGACATCT GTGGTTGAGGAGTTAGAGGGGGGAGGGCGTCCGTCAAGGCGGCCACGGAA GGGGTGTCAGGGCGACCCCGACATTGCCGTAGGGGAGCACGTGGACCCAA GTCTGTTTGTGGCTGAGCCGTGCTCGGGGGTACCGGGCCTGGAGATCCAG GATGCAGCGTCTGGCAGGTACAGCACCGTAATGGCCGGAGAGATCTTGCC CCCCCATGCCAATTTTCGGGAGAACTTTTCTCGCCAAATACTGGTCGGAG TCGCGCAAGGGGGGTAGAGTAGGTACAATAGGTAGGTACATGCACAGTAC TACACACTGTAGTACAGTACTTCATGTGTACCGTAGATAGACGAGTGGAG CTTCAAAATGTATGTACTCGAGTACAACAACTAGGTCTCGGTTGCTCTGG CCCCGTGCCCGTCTCACACCCTCCCCACCCCCCTGCCCCCCCCTCCCCCT CCTGTCTCACCCTTCCTTCCTTCTTTGACCGATCACTCCCCCCTGCCCCC CCCCCCGCCCCCCCCCCTCCCCCGCCACCCCCCCATACCCCCCCGGCCAA ACTGTCCGCGGTGGCGGTGGCGGTGGCGGTGGCGGCCTGCCACGCCAGAT GGATTGAGGTGGAGGCTGCGTGTGTGGGCCTGTTGCAGCGGCAACAACGA CCCCAGGCCACTGGAGACCTCAACAATGGCCCTTCCTCAGCTCGCCAGGG GAGGGGGTTGTGTGCGGCCCAGGCCCAGGGAAGGGGGAGGGCGGGGGAAA GGAAGGAGGAGGAAGCGACTGCCTTGGACCCTGAGCTCTCCGAGGGCCAG CAGCTGATTTTGTTTGGGGGTTTGGCCCTGGAGCGGGCGACGGCGGGGCG GGTGCGCGCTGCCCCCCACCGCGTCCGCCACGGGCCCTCCCGGAGGGTGT GCTTCATTTACGAGCAGAAGTTCGCAGAATTTTTCCCCGCGAGAGCCATA GACTGATTGTGATCCATATGCTTCGAAGTAAACTGTAGTGAGGTATTTGT ACAATCACACGTGTGTGAGATTGGCTGTTCACGTATTAGTATTGTCAGGA ACAACACGGGGCGAGGTGCAGGCAACGTCACTAGAGACCTCAGCAGTGGC CCTTCCTTAGCTCGTATTGGTAGTTGTTGTCCCATTTAAGAATTGAGTGT TCTTGTACTAGTGGTCATGGACCGATTGTTTGGTGATTTGATTGATGAGC CTTGAACCCATGGTGGCCGTCGCGCCGCAGGAGTTTTGCAGTTTTTGCCC CCCCCTGGAGGGGGTGCACTGGCACTAGGGAGAAAGATATGACATCTTTT AGAATTTGCTGACGATCGCCAAGCGCAAGAGTATCTGGTCCGAGTTGGAC ATCCGCGAGGAGGGCCTGAACCACAACAACGGACCAGGGGGCGCAGGACG GGGGCAACAGCGGGCTAGGAGAGTCAGACATCTTCGGTGCGAAAGGTATC TGAGCTGGACATCCGCAAGGAGGGCCTGAACTACAACAACGGACCAGGGG GC
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Coding sequence (CDS) from alignment at S-ischiensis_contig14:993418..996069+

>mRNA_S-ischiensis_contig14.3240.1 ID=mRNA_S-ischiensis_contig14.3240.1|Name=mRNA_S-ischiensis_contig14.3240.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2154bp|location=Sequence derived from alignment at S-ischiensis_contig14:993418..996069+ (Schizocladia ischiensis KU_0333)
ATGGAAAGGCACGGATTCGTCATCCTCACGGACGTGGGGCCCGTGCACCA
GCTCTACCAGGACCTGGCGGGGGAACTACGAATGGAAAGGCACGGATTCG
TCATCCTCACGGACGTGGGGCCCGTGCACCAGCTCTACCAGGACCTGGCG
GGGGAACTACGAGCGGTCGGCTCTGCTGGCGTGGCCTGCGGTGCCATGTC
CTCCTCCGCTAAGGAGGCATGCACAGGGGCGGTGCACTTCAACGAACGTG
GCATACCCATGGCGGTCGGCTCTGCTGGCGTGGCCTGCGGTGCCATGTCC
TCCTCCGCTAAGGAGGCATGCACAGGGGCGGTGCACTTCAACGAACGTGG
CATACCCATGTGGCACGTCGGGTACGAGCGCTGCGGCGCCACCCGAGAGG
CCTTCAGAGTAGAGGCGGGCCGCCCCGACCGTGCCCCGTGGCCCTCCCCC
TCTCTCAGAAACGCCTTCCTACGGCTGCTTCGCGTAGTCCGCCGCGTGTG
CATCCGTGCCCTGCGCCTGTCGCTGGGGGCGGGGGGGGCGGGGCCGGGCG
GGCGCCTCCTCGACCCACCGCCAGAGCCCGCTTGCCTGTCCCATCCTCGG
GGGGCGCTGGCGGCGGTGGCGCGAGGGGGCGAGGGTGGGGCGGGGGGGGT
GGCTAGGCCAGGGGAGGGGGTAGAGGAGCAGGAGACGCAGGGGGCAGTAG
CGGCTGTGGCGCAAGGAGGCGGGGGTGGGGCGGGGGTGGCTGGGCCAGGG
GAGGGGGTAGAGGAGCAGGAGACGCAGCGGCGACAGCAGCAGCAGCAGCG
GCAGGAGGAGGAGGATGAGGAAGATGCCGAGGACGACTTCTCCGTGTGCT
ACGCGCTGCACTACCCCAACACGGAGGAGGAGGAGGAGGAGCAAGCGCCA
GCAGTGACATCTTGGCACGTCGGGTACGAGCGCTGCGGCGCCACCCGAGA
GGCCTTCAGAGTAGAGGCGGGCCGCCCCGACCGTGCCCCGTGGCCCTCCC
CCTCTCTCAGAAACGCCTTCCTACGGCTGCTTCGCGTAGTCCGCCGCGTG
TGCATCCGTGCCCTGCGCCTGTCGCTGGGGGCGGGGGGGGCGGGGCCGGG
CGGGCGCCTCCTCGACCCACCGCCAGAGCCCGCTTGCCTGTCCCATCCTC
GGGGGGCGCTGGCGGCGGTGGCGCGAGGGGGCGAGGGTGGGGCGGGGGGG
GTGGCTAGGCCAGGGGAGGGGGTAGAGGAGCAGGAGACGCAGGGGGCAGT
AGCGGCTGTGGCGCAAGGAGGCGGGGGTGGGGCGGGGGTGGCTGGGCCAG
GGGAGGGGGTAGAGGAGCAGGAGACGCAGCGGCGACAGCAGCAGCAGCAG
CGGCAGGAGGAGGAGGATGAGGAAGATGCCGAGGACGACTTCTCCGTGTG
CTACGCGCTGCACTACCCCAACACGGAGGAGGAGGAGGAGGAGCAAGCGC
CAGCAGTGACATCTGGCGACCCCGACATTGCCGTAGGGGAGCACGTGGAC
CCAAGTCTGTTTGTGGCTGAGCCGTGCTCGGGGGTACCGGGCCTGGAGAT
CCAGGATGCAGCGTCTGGCAGGGCGACCCCGACATTGCCGTAGGGGAGCA
CGTGGACCCAAGTCTGTTTGTGGCTGAGCCGTGCTCGGGGGTACCGGGCC
TGGAGATCCAGGATGCAGCGTCTGGCAGATGGATTGAGGTGGAGGCTGCG
TGTGTGGGCCTATGGATTGAGGTGGAGGCTGCGTGTGTGGGCCTGAAGGA
GGAGGAAGCGACTGCCTTGGACCCTGAGCTCTCCGAGGGCCAGCAGCTGA
TTTTGTTTGGGGGTTTGGCCCTGGAGCGGGCGACGGCGGGGCGGGTGCGC
GCTGCCCCCCACCGCGTCCGCCACGGGCCCTCCCGGAGGGTGTGCTTCAT
TTACGAGCAGAAGTTCGCAGAATTTTTCCCCGCGAGAGCCATAGACTGAG
AAGGAGGAGGAAGCGACTGCCTTGGACCCTGAGCTCTCCGAGGGCCAGCA
GCTGATTTTGTTTGGGGGTTTGGCCCTGGAGCGGGCGACGGCGGGGCGGG
TGCGCGCTGCCCCCCACCGCGTCCGCCACGGGCCCTCCCGGAGGGTGTGC
TTCATTTACGAGCAGAAGTTCGCAGAATTTTTCCCCGCGAGAGCCATAGA
CTGA
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