mRNA_S-ischiensis_contig12.2609.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig12.2609.1
Unique NamemRNA_S-ischiensis_contig12.2609.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: D7FSG2_ECTSI (WD-repeat protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG2_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 8.540e-50
Identity = 83/122 (68.03%), Postives = 100/122 (81.97%), Query Frame = 2 
Query:    2 NSLCFSPDGLDLLSAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLWSA 367
            NSLCF+P+GL LL+AGTD+RLRLW   TGRN+MTN+L T+N+RR+PF MA+ +PAG R+ +V FFPNDKSGDVL + LH+ DGR  G LRGHF PV CCAYR  TQE+VT  ADGL+LLWSA
Sbjct:  347 NSLCFAPEGLHLLTAGTDNRLRLWEVETGRNTMTNYLQTKNKRRRPFGMAVGRPAGRRSETV-FFPNDKSGDVLVFPLHTPDGRPKGKLRGHFDPVQCCAYRPRTQEVVTCGADGLVLLWSA 467
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: A0A835YTD9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.160e-30
Identity = 59/111 (53.15%), Postives = 78/111 (70.27%), Query Frame = 2 
Query:   41 SAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLWSAPS 373
            +AG   RL LW   +G N++T++LGT+NRR KPFRMA A+        + FFP + +GDVL + +++HDGR   ALRGHF+ V  CAYR  TQEL+TS ADGL+LLWS P+
Sbjct:  233 TAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAE-------DLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSCPA 336
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: L8HF88_ACACA (CSA protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HF88_ACACA)

HSP 1 Score: 96.3 bits (238), Expect = 6.140e-21
Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 2 
Query:    5 SLCFSPDGLDLLSAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLWSAPSL 376
            SLC+SPDGL L S+G D+++ +W+A TGRN++ NF G +N   K  +MAI     S    V + PN    D+LA  L +H GR    LRGHF  V CC +    QEL +   D  LL W  PS+
Sbjct:  246 SLCWSPDGLFLYSSGKDNKIHMWNADTGRNTLVNFAGVKNAAEKGSQMAI-----SSDGQVLYHPNGS--DILA--LEAHTGRTLSLLRGHFDKVNCCVFHPHLQELYSGGNDNQLLCW-VPSM 359
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: UPI001939DFDF (DNA excision repair protein ERCC-8-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939DFDF)

HSP 1 Score: 93.6 bits (231), Expect = 6.530e-20
Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 2 
Query:    2 NSLCFSPDGLDLLSAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLWSAPSLS 379
            N +CFS DGL ++S GTD+RLRLW+A TG+N++TN+    N  ++P +M+      +  S+  F P+D+   VL   ++  +G     L GHF    CC +    QE+ +   DG +L+W APS S
Sbjct:  252 NGICFSTDGLFMISTGTDNRLRLWNATTGQNTLTNYGRIENSYKRPVQMSF-----NTDSNTVFVPSDRH--VL--HMNVQEGTLVKKLSGHFNRPTCCEFNPRNQEMYSGGQDGNILVWGAPSTS 368
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: UPI001885DFB7 (DNA excision repair protein ERCC-8 isoform X2 n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885DFB7)

HSP 1 Score: 91.7 bits (226), Expect = 7.520e-20
Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 2 
Query:    2 NSLCFSPDGLDLLSAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLW 361
            N LCFS DGL LL++GTDDR+RLW++ TG N++ N+    N+ RK  ++ +++     +    F P   S  V  Y LH+  G     LRGHF  V CC +  D QEL ++  DG +L W
Sbjct:  132 NGLCFSSDGLHLLTSGTDDRMRLWNSATGANTLVNYGKVSNKSRKRRQLTVSRGC---SPEFVFVPCGSS--VAVYGLHT--GELVTMLRGHFNYVDCCEFHPDHQELYSAGKDGNILAW 244
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: A0A3B3THK2_9TELE (ERCC excision repair 8, CSA ubiquitin ligase complex subunit n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3THK2_9TELE)

HSP 1 Score: 92.0 bits (227), Expect = 2.130e-19
Identity = 51/120 (42.50%), Postives = 66/120 (55.00%), Query Frame = 2 
Query:    2 NSLCFSPDGLDLLSAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLW 361
            N LCF+ DGL LLSAGTDDR+RLW A +G N++ N+    N  RK  + A++Q     +   AF P   S  V  Y LH+  G     LRGH+  V CC +  D QEL +   D  +L W
Sbjct:  248 NGLCFTADGLFLLSAGTDDRMRLWKAASGENTLVNYGKVANETRKGLKFAVSQGC---SPEFAFVPCGSS--VAVYALHT--GELVTMLRGHYNNVDCCEFHPDYQELYSGGKDCNILAW 360
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: A0A401Q813_SCYTO (Uncharacterized protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401Q813_SCYTO)

HSP 1 Score: 86.7 bits (213), Expect = 3.060e-19
Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 2 
Query:    2 NSLCFSPDGLDLLSAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLW 361
            N LCF+ DGL LL+ GTDDR+RLW++ TG N++ N+    N  RK  +  ++      ++  AF P D    +  Y ++S  G+    LRGH+  V CC ++ D QEL +  +D  +L W
Sbjct:    9 NGLCFTSDGLHLLTIGTDDRMRLWNSSTGHNTLVNYGRVSNESRKGLKFTVSSGC---SADFAFVPVDSC--IAMYDIYS--GQLLTELRGHYNYVNCCTFQSDFQELYSGGSDVNILAW 121
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: UPI0015A96479 (DNA excision repair protein ERCC-8 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A96479)

HSP 1 Score: 91.3 bits (225), Expect = 4.120e-19
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 2 
Query:    2 NSLCFSPDGLDLLSAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLW 361
            N L F+PDGL LLS GTDDR+RLW++ TG N++ N+    N  RK  ++A++Q     ++  AF P   S  V  Y LH+  G     LRGH+  V CC +  D QEL +   D  +L W
Sbjct:  250 NGLRFTPDGLHLLSTGTDDRMRLWNSATGANTLVNYGKVENDSRKGLQVAVSQGC---SAEFAFVPCGSS--VAVYALHT--GERVTTLRGHYNNVNCCVFHPDYQELYSGGKDCNILAW 362
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: A7SIS6_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SIS6_NEMVE)

HSP 1 Score: 90.5 bits (223), Expect = 7.750e-19
Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 2 
Query:    2 NSLCFSPDGLDLLSAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLW 361
            NS+CF+ DGL++LS GTD+RLRLW   TG+N++ N+    N   K  + A ++      S V F PN   G +  Y +HS  G+   +L GH+  V CC+++HD Q L + + D  LL W
Sbjct:  249 NSICFTSDGLNILSYGTDNRLRLWDTFTGKNTLVNYGRLENPSNKAIQCATSE---GNLSEVVFVPN--LGSINIYDIHS--GKRISSLVGHYNKVNCCSFQHDYQVLYSGSFDCHLLSW 361
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BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Match: A0A8C9VXN1_SCLFO (ERCC excision repair 8, CSA ubiquitin ligase complex subunit n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9VXN1_SCLFO)

HSP 1 Score: 89.4 bits (220), Expect = 8.730e-19
Identity = 51/129 (39.53%), Postives = 69/129 (53.49%), Query Frame = 2 
Query:    2 NSLCFSPDGLDLLSAGTDDRLRLWSAVTGRNSMTNFLGTRNRRRKPFRMAIAQPAGSRTSSVAFFPNDKSGDVLAYRLHSHDGRYTGALRGHFQPVLCCAYRHDTQELVTSAADGLLLLWSAPSLSPRP 388
            N LCF+ DGL LL+ GTDDR+RLW   TG+N++ N+    N  RK  + A++Q     +   AF P   S  V  Y +HS  G     L+GH+  V CC +  D QEL +   D  +L W     +PRP
Sbjct:  174 NGLCFTGDGLFLLTTGTDDRMRLWETATGKNTLVNYGKVVNESRKGLKFAVSQGC---SLEFAFVPCGSS--VAVYAVHS--GELVTMLKGHYSNVDCCEFHPDYQELYSGGKDSNILAWIP---TPRP 292
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSG2_ECTSI8.540e-5068.03WD-repeat protein, putative n=2 Tax=Ectocarpus Tax... [more]
A0A835YTD9_9STRA9.160e-3053.15WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
L8HF88_ACACA6.140e-2143.55CSA protein n=1 Tax=Acanthamoeba castellanii str. ... [more]
UPI001939DFDF6.530e-2038.10DNA excision repair protein ERCC-8-like n=1 Tax=St... [more]
UPI001885DFB77.520e-2040.83DNA excision repair protein ERCC-8 isoform X2 n=1 ... [more]
A0A3B3THK2_9TELE2.130e-1942.50ERCC excision repair 8, CSA ubiquitin ligase compl... [more]
A0A401Q813_SCYTO3.060e-1937.50Uncharacterized protein (Fragment) n=1 Tax=Scylior... [more]
UPI0015A964794.120e-1941.67DNA excision repair protein ERCC-8 n=1 Tax=Anguill... [more]
A7SIS6_NEMVE7.750e-1940.00Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A8C9VXN1_SCLFO8.730e-1939.53ERCC excision repair 8, CSA ubiquitin ligase compl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig12contigS-ischiensis_contig12:1244802..1248752 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size390
Cds size390
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig12.2609.1prot_S-ischiensis_contig12.2609.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig12 1244802..1248752 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815633.373918-CDS-S-ischiensis_contig12:1244801..12449301622815633.373918-CDS-S-ischiensis_contig12:1244801..1244930Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1244802..1244930 -
1695739817.0799007-CDS-S-ischiensis_contig12:1244801..12449301695739817.0799007-CDS-S-ischiensis_contig12:1244801..1244930Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1244802..1244930 -
1622815633.3865054-CDS-S-ischiensis_contig12:1246267..12463411622815633.3865054-CDS-S-ischiensis_contig12:1246267..1246341Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1246268..1246341 -
1695739817.0930672-CDS-S-ischiensis_contig12:1246267..12463411695739817.0930672-CDS-S-ischiensis_contig12:1246267..1246341Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1246268..1246341 -
1622815633.396444-CDS-S-ischiensis_contig12:1247885..12480121622815633.396444-CDS-S-ischiensis_contig12:1247885..1248012Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1247886..1248012 -
1695739817.1071773-CDS-S-ischiensis_contig12:1247885..12480121695739817.1071773-CDS-S-ischiensis_contig12:1247885..1248012Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1247886..1248012 -
1622815633.4128118-CDS-S-ischiensis_contig12:1248692..12487521622815633.4128118-CDS-S-ischiensis_contig12:1248692..1248752Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1248693..1248752 -
1695739817.1164155-CDS-S-ischiensis_contig12:1248692..12487521695739817.1164155-CDS-S-ischiensis_contig12:1248692..1248752Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1248693..1248752 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig12.2609.1

>prot_S-ischiensis_contig12.2609.1 ID=prot_S-ischiensis_contig12.2609.1|Name=mRNA_S-ischiensis_contig12.2609.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=130bp
EFAVLLPRRTGPAQRRHGRQTPAVERRHGAQQHDQLPGHAQPPPEALPDG
HCTARGVSHQLCGVLPQRQERRRAGVPPPLTRWQVHRRPPRSLPARPLLR
LPTRHPRTGHLRRRRPSPPLVRPVPLPPPP
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mRNA from alignment at S-ischiensis_contig12:1244802..1248752-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig12.2609.1 ID=mRNA_S-ischiensis_contig12.2609.1|Name=mRNA_S-ischiensis_contig12.2609.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3951bp|location=Sequence derived from alignment at S-ischiensis_contig12:1244802..1248752- (Schizocladia ischiensis KU_0333)
GAATTCGCTGTGCTTCTCCCCCGACGGACTGGACCTGCTCAGCGCCGGCA
CGGACGACAGGTACAACGCTTCGCAGTACAGTATACCTTTGCAGTAGGCG
CTGTGAGGACTGTGAGCAGTGATAGGATATCTAGGCAAATCAACCTATTT
ATCGAAGCAACCACCTATTTGGCAAGTGTACGAGTGTATCTGCCGATGTA
TCTACGGTGAACTCCCTCTGCTTCTCCCCCGACGGCCTGGACCTGCTCAG
CGCCGGCACGGACGACAGGTACATTTTGCAGTACCGTAGGCGCTGTGAGG
ACCGTTAGCAGTGATGGGATATCTAAACGAATTTACCTATTTATCGACAC
ACGAAGACCGCGCGTCGGCTGCCAGACTCCGGCTGTGGAGCGCCGCGACG
GGGCGCAACAGCGTGACCTAACTTCCTGGGCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCCCTCTCTCCCTCTCTCCCTCCCTCCCTCTCTCTCCCTCCCC
CTCTCTCTCTCACACACACAAACCGCTCCTCTGCTGCCAGACTCCGGCTG
TGGAGCGCCGTCACGGGGCGCAACAGCATGACCAACTTCCTGGGCACGCG
CAACCGCCGCCGGAAGCCCTTCCGGATGGCCATTGCACAGCCCGCGGGGT
CTCGCACCAGCTCTGTGGTGGGTGAAATTGCTTTGATTCATACATACAAA
GTATATAAATTGTAACGAGGTACATCGCACGTGTGTGAAAGCCCTCCCAA
TGGCCATCGCGCAGCCCGCGGGGTCTCGCAGCAGCTCTGTGGTGGGTAAA
CTTGCACATTCGACAGGCGTGCCGCTGTCCTCTACCAGTATTAGCAGGAA
CAACACACAGGGCGAGGTGCAGGCCGCGTCACTAAAGACCTCAACAGTGG
CGCTTCCTTACGGCAGCAGCAGCAGCAGTAGTAGTACAGTAGTAGCATTA
GCATGAACAACATAGGGCGAGGTGCAGGCCACGTCACTAAAGGCCTCAAC
AGTGGCCCTTCCTTCGCTCACCAGGGGAAGTTTGTGTGGCCGTGCAGTAG
ATAGTACGAAGTCGTTGGCAGTCGCATGGGGTAGCTTCTGGGAGGCCCCG
CTGTCATGGAGCTTGCACCTTCAGTGGCGGTAGCAGGCAGTGGTGGAATA
TCGAATATTGAAATATACTACATAGTATATAACAAACGTTACTGTCAAGC
TTTGTGACAGTGCGACTCGACATTGCGGTAGGTCGATTGTAGGCTCAGAG
GAGGGGAGCACCTTGTGTTGCAGTGCATTGCATGGTACTGTTCGTTTGGG
ATACACTCGAGCACGTCGGAGCAGTTGCTGCGAGGTTTAGTAGATATGCA
GGGGCGTTTTGTAGCCGCGGTCCAAGCTTCTAGAAAAGGCACACGCCGTC
CAAGGTGCATGCAGCCGTAATCATGTTTCACTCTCCTTGAAACCACACCC
TGCGGGGAAGGCGCATGAAGTGCTGATGGCGGTGTCGTGGTGCACGACGC
CTTGGTGCTTGACAGTTATATCGAATAAATATGACGATCGCCGCATATAT
ATCGACGTTATATCGACTGATGTATTCTTGTTTCTTTAGTTTTGAGCATG
TCAGGACGACCTGGGCAAATGTCTCCCATAGAAGAAACTACTTGGTTTTA
GTATGGGCTATGGTATCACAATGTCGATATATCGATATATATAACAACGT
TGTTCTATCGATATGTTTGTCGATATATATATAGCAAATCGGGTCGATAT
TCCGTCGCTGGTACTGTAGCAGGCAGGTCCCCGTCCGTTTCCTTCTTTCG
TTTTAATGTTCTTCTTGCCCTGCGAGGGAAGGCTACCGTTGAGTCCTGTT
TTGGGATGAAGCTTTTGGCACGGGGCCTGGATCTCGCCGTGTATCTACCA
CTCAAGGAAGTAAGCACAGCAACACTGGCTGCGGGGTACTTTGAACAATT
TCGCGTCGCATCGCGGACGGCACGCCGCATGCGTTCGCATCGCTTCACAT
TGCATCGCATCGCATCACGTTACGCCGCACCATATTACATCACATCCCAT
CACATCACACCGCGCCGTTCCGCAGAGGGTTGGCACTTAACCCCTGAGTG
GTGCCCTTTTAGGCCCATAATTAGAGGTAATTAGGGGTAGTTGGACCTAA
AATGAAGGCTAATTAGGCCCTAACTAACCTCTAAGTGCCAACCCTGGCTC
ACCTTCCGCAGGCGTTCTTCCCCAACGACAAGAGCGGCGACGTGCTGGCG
TACCGCCTCCACTCACACGATGGCAGGTACACCGGGTGAGTGAGATGCCT
CTTTGTTCTTAATTCTTCGATGTGATATTCACTGCTGTGATACGAGAACA
CTCAATTTTGGCATGAAGATAAACAAGCGAGTGGGAAGGAAGAGGTGTTC
CTACTTAAGCGAGTTCAGGGCCCCAACCTGAACACTCAATTCTTAAGTGG
AGAAACTACTAATACGAGAACACTCAATCTCACACACGCGTGCGCGATTG
CACCTCGTTACAATGTACTACGTAGTGTTGAAACACCACTGTGGCAGCCT
GAGAAACCACTACTAGGGAGTACCATTTCTGGTACGCACAAAGTCCTTGC
AAGGAAAAACTTGTTCTCCAAGCTATACTGCAAATGCCTGGGGCCAAGTC
TCAGAACAATTATGTACTGTACCGTAACCGTAGTGCCGTAATCGTCAGAG
AGGTCTTGCCCCCCCATGCCAATTTTCCGGCGAACGGTTCTCGCCGAACA
CTGGTCGGATTCGCGCGGGAAGACTCGGAAAAGCTCCATCAGGACCCGGG
GGAACTTTTCCGAGAGTTTTCGGGACAATTCGGGACCTTCCGGCTAGAAG
TACTCGCCCGAAAATTGTCCAGCGAGGGCAACATCTCTCCGGCGATTACG
GTACACACTGGCACCGCGACACGGCCAAGAGTCCGCCTCAACGTGGTACT
GTGGACCCCTCCTCTTCCCTCTCCCCTCCCTCCCCTCCCTCCCTCCCTCC
CTCCCTCCCTGCCACCCTCCCTCCTTCCCTCCTTCCCTCCCTCCCTGCCT
GCCTCCCCCTCCCTTGCTCCCTCCCTCCCTCCCTCCCTCCCCCTCCCTCC
CCCCCTCTGTGCCCCCCCAGCGCGCTCCACGGCCACTTCCAGCCCGTCCT
CTGCTGCGCATATCGCAACGATCAACGTGCGTACTGTCACAGGACCCCTC
CTCTCTCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCCCCCTACGCG
CCCCCCAAGTGCTCTCCGCAGCCACTTTCAATCCGCCCTCTGCTGCGCAT
ACCGCCTACTGCCTCAATGTGGGTACTGCGGACCCCTCCTCTTCCCCCTC
CCTTCCCTCCCTCCCTCCCTCCATCCCTCCCCCCCTCTGTCTCCCCCAGC
GTGCTCCGCGGCCACTTTCAGCCCGTCCTCTGCTGCGCATGCTGCCCCAA
TCAATGTGGGTGATTCATATACTGCCAGCAAATTGCAACGAGGTACAATC
GCACGTGTGTGAGATTGAGTGTTCTCGTATTAGTACTTAGTTGAATGTGG
GTGGACCTCCCCCTAACCCCACCCTCCTCTTCCCTCTCCCCTCCCTCCCT
CCCCCCCCTCTGTCTCCCCCAGCGCCCTCCGCGGTCACTTCCAGCCCGTC
CTCTGCTGCGCCTACCGACACGACACCCAAGAACTGGTCACCTCCGCCGC
AGACGGCCTTCTCCTCCTCTGGTCCGCCCCGTCCCTCTCCCCCCGCCCCC
C
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Coding sequence (CDS) from alignment at S-ischiensis_contig12:1244802..1248752-

>mRNA_S-ischiensis_contig12.2609.1 ID=mRNA_S-ischiensis_contig12.2609.1|Name=mRNA_S-ischiensis_contig12.2609.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=780bp|location=Sequence derived from alignment at S-ischiensis_contig12:1244802..1248752- (Schizocladia ischiensis KU_0333)
GAATTCGCTGTGCTTCTCCCCCGACGGACTGGACCTGCTCAGCGCCGGCA
CGGACGACAGGAATTCGCTGTGCTTCTCCCCCGACGGACTGGACCTGCTC
AGCGCCGGCACGGACGACAGACTCCGGCTGTGGAGCGCCGTCACGGGGCG
CAACAGCATGACCAACTTCCTGGGCACGCGCAACCGCCGCCGGAAGCCCT
TCCGGATGGCCATTGCACAGCCCGCGGGGTCTCGCACCAGCTCTGTGACT
CCGGCTGTGGAGCGCCGTCACGGGGCGCAACAGCATGACCAACTTCCTGG
GCACGCGCAACCGCCGCCGGAAGCCCTTCCGGATGGCCATTGCACAGCCC
GCGGGGTCTCGCACCAGCTCTGTGGCGTTCTTCCCCAACGACAAGAGCGG
CGACGTGCTGGCGTACCGCCTCCACTCACACGATGGCAGGTACACCGGGC
GTTCTTCCCCAACGACAAGAGCGGCGACGTGCTGGCGTACCGCCTCCACT
CACACGATGGCAGGTACACCGGCGCCCTCCGCGGTCACTTCCAGCCCGTC
CTCTGCTGCGCCTACCGACACGACACCCAAGAACTGGTCACCTCCGCCGC
AGACGGCCTTCTCCTCCTCTGGTCCGCCCCGTCCCTCTCCCCCCGCCCCC
CCGCCCTCCGCGGTCACTTCCAGCCCGTCCTCTGCTGCGCCTACCGACAC
GACACCCAAGAACTGGTCACCTCCGCCGCAGACGGCCTTCTCCTCCTCTG
GTCCGCCCCGTCCCTCTCCCCCCGCCCCCC
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