mRNA_S-ischiensis_contig11.2191.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: A0A6H5K2V6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2V6_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.160e-25 Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 3
Query: 219 EVEAWMVHTVGRPMRVSGDLYESLRDGWYLALLANAIKPRSVHPVHNSIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTLLSLREL 518
+V+ ++ +P RVSGD++ESLRDGW LALLANA++P +V VHNSI+ V H NI +FL ACR MGVAR LLF + DLY R RV RTLL+LR L
Sbjct: 747 QVQRFVELHTRQPWRVSGDMHESLRDGWQLALLANALRPGAVRCVHNSIQPVKHIQNIASFLIACRRMGVARALLFDIEDLYEKRSNTRVARTLLALRAL 846
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: A0A7S2G3N3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3N3_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.130e-8 Identity = 33/98 (33.67%), Postives = 50/98 (51.02%), Query Frame = 3
Query: 207 DPYQEVEAWMVHTVGRPMRVSGDLYESLRDGWYLALLANAIKPRSVHPVHNSIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTL 500
D E + W+ H G + G +L+DG L L NAI+P ++ + +S A NI F A GV + +F +PDLY ++D+ VVRT+
Sbjct: 13 DALAETQRWIEHLTGGSLDEEGGFQAALKDGKRLCALINAIQPGTIKKISDSKIAFKQMENISKFHNAAVAFGVPKEDIFTIPDLYEDKDIGGVVRTV 110
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: A0A6H5L6G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G5_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 2.540e-8 Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 3
Query: 174 PLRPEPLGQSGDPYQEVEAWMVHTVGRPMRVSGDLYESLRDGWYLALLANAIKPRS-VHPVHNSIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTLLSLRELVLRGVAELRSP 551
PL P+G D +EV W+ + + SL+DG L L + ++P + + +S A ANI FLR+CR +G+ +LF DLY +D+ VV+TL++L E V R + P
Sbjct: 1320 PLESRPIGGPWD-EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPITAPSDSSLAYKQMANICIFLRSCRNLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGP 1445
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: D7FRC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC5_ECTSI) HSP 1 Score: 63.5 bits (153), Expect = 5.920e-8 Identity = 41/127 (32.28%), Postives = 62/127 (48.82%), Query Frame = 3
Query: 174 PLRPEPLGQSGDPYQEVEAWMVHTVGRPMRVSGDLYESLRDGWYLALLANAIKPRS-VHPVHNSIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTLLSLRELVLRGVAELRSP 551
PL P+G D +EV W+ + + SL+DG L L + ++P + + +S A ANI FLR CR +G+ +LF DLY +D+ VV+TL++L E V R + P
Sbjct: 763 PLESRPIGGPWD-EEEVLKWVRDVTKLDIDPECGVAYSLKDGVALCRLMSKLQPGAPITAPSDSSLAYKQMANICIFLRCCRTLGLGESILFETADLYEEKDIPNVVKTLVALGEHVPRSCPAFKGP 888
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: A0A0L0HPZ6_SPIPD (STE/STE11/CDC15 protein kinase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HPZ6_SPIPD) HSP 1 Score: 61.2 bits (147), Expect = 3.190e-7 Identity = 34/108 (31.48%), Postives = 57/108 (52.78%), Query Frame = 3
Query: 243 TVGRPMRVSGDLYESLRDGWYLALLANAIKPRSVHPVHNSIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTLLSLRELVLRGVAELRSPGCVTP 566
T+GR + + L+ESLR+G L L N +KP S+ + NI FL A + +G+ H LF DL+ +DM++V+ T+L++ ++ + R P + P
Sbjct: 52 TIGRKLG-NDSLHESLRNGVVLCELMNKLKPGSISIISTRDAPFLQMENINRFLTASKNLGLKGHELFQTVDLFEGKDMQQVIITILTIARVIAGSPLKSRPPDELNP 158
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: A0A2G5BFH3_COERN (Calponin-homology (CH) domain-containing protein (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BFH3_COERN) HSP 1 Score: 57.0 bits (136), Expect = 7.260e-7 Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 3
Query: 276 LYESLRDGWYLALLANAIKPRSVHPVHNSIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTLLSL 509
L ESLRDG L L N ++P +V ++ NI NFL A + +G+ LF DLY ++M RVV TLL++
Sbjct: 52 LRESLRDGVVLCRLINKLRPGAVKRINTRSIPFTQMENISNFLAAAQSLGLDSSDLFQTVDLYEGKNMPRVVMTLLTI 129
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: A0A812Q704_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q704_9DINO) HSP 1 Score: 58.2 bits (139), Expect = 1.830e-6 Identity = 35/112 (31.25%), Postives = 54/112 (48.21%), Query Frame = 3
Query: 222 VEAWMVHTVGRPMRVSGDLYESLRDGWYLALLANAIKPRSVHP--VHNSIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTLLSLRELVLRGVAELRSP 551
V AW+ G + G E L++G L NAIKP++V + S I +L+ CR +G+A H +F PDL+ +D+ VVR++++L V E P
Sbjct: 30 VVAWLEELTGE--KKEGTFAEWLKNGVVLCKALNAIKPKTVKKSAMKPSTMPFKQMEVIKAYLQGCRSLGMAEHDVFCTPDLFEEKDLGAVVRSIVALSSTAQTKVPEFSGP 139
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: UPI0005CE78C5 (muscle-specific protein 20 n=1 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CE78C5) HSP 1 Score: 56.6 bits (135), Expect = 2.550e-6 Identity = 41/131 (31.30%), Postives = 58/131 (44.27%), Query Frame = 3
Query: 207 DPYQEVEA--WMVHTVGRPMRVSGDLYESLRDGWYLALLANAIKPRSVHPVHNSIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTLLSLRELVLRGVAELRSPGCVTPPALPSPGQE 593
DP QE EA W+ +G+ + + L+DG L L N IKP S+ ++ S NI F +A + GV +F DL+ +D+ RV+ TL +L G R P P P P E
Sbjct: 16 DPEQEREAQEWIETIIGKKFPKNAVFDDVLKDGTILCELMNKIKPGSIPKINTSGGEFKMMENINKFQKALKDYGVQDVDVFQTVDLWEKKDLARVIMTLFAL------GRETYRHPEFKGPNLGPKPSDE 140
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: F4QER5_CAVFA (Calponin domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QER5_CAVFA) HSP 1 Score: 58.2 bits (139), Expect = 4.030e-6 Identity = 36/100 (36.00%), Postives = 55/100 (55.00%), Query Frame = 3
Query: 216 QEVEAWMVHTVGRPMRVSGDLYESLRDGWYLALLANAIKPRSVHPVH--NSIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTLLSL 509
+EV W+ +P DL+++L DG +L LAN IKP + +H NS + + NI FL AC +GV LF DLY +++++V+ LL+L
Sbjct: 150 EEVRGWLEECFEQPFEEE-DLFQALMDGQWLCKLANLIKPGIIKRIHKKNSPPFMRLE-NINFFLCACLELGVKSDYLFLPTDLYERKNLKKVIYCLLAL 247
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Match: A0A151ZCF1_9MYCE (Calponin (CH) domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZCF1_9MYCE) HSP 1 Score: 57.4 bits (137), Expect = 7.350e-6 Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 3
Query: 216 QEVEAWMVHTVGRPMRVSGDLYESLRDGWYLALLANAIKPRSVHPVHN-SIRAVNHQANIMNFLRACRGMGVARHLLFHVPDLYNNRDMERVVRTLLSL 509
+EV AW+ + DL+E L DG +L L N IKP V +H + ++ NI FL AC +GV LF DLY +++++V+ LL+L
Sbjct: 133 EEVRAWLEMCFDQSFDTE-DLFEDLMDGIWLCKLVNLIKPGIVKKIHRKNSQSYLKLENINFFLCACMELGVQPECLFLPTDLYEKKNLKKVIYCLLAL 230 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2191.1 >prot_S-ischiensis_contig11.2191.1 ID=prot_S-ischiensis_contig11.2191.1|Name=mRNA_S-ischiensis_contig11.2191.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=128bp MVHTVGRPMRVSGDLYESLRDGWYLALLANAIKPRSVHPVHNSIRAVNHQback to top mRNA from alignment at S-ischiensis_contig11:1905871..1907569- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2191.1 ID=mRNA_S-ischiensis_contig11.2191.1|Name=mRNA_S-ischiensis_contig11.2191.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1699bp|location=Sequence derived from alignment at S-ischiensis_contig11:1905871..1907569- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1905871..1907569- >mRNA_S-ischiensis_contig11.2191.1 ID=mRNA_S-ischiensis_contig11.2191.1|Name=mRNA_S-ischiensis_contig11.2191.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=768bp|location=Sequence derived from alignment at S-ischiensis_contig11:1905871..1907569- (Schizocladia ischiensis KU_0333)back to top |