mRNA_S-ischiensis_contig11.2069.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2069.1
Unique NamemRNA_S-ischiensis_contig11.2069.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: A0A1F2XQH4_9ACTN (Sulfotransfer_1 domain-containing protein n=1 Tax=Actinobacteria bacterium RBG_16_68_12 TaxID=1797203 RepID=A0A1F2XQH4_9ACTN)

HSP 1 Score: 97.8 bits (242), Expect = 1.400e-18
Identity = 91/283 (32.16%), Postives = 132/283 (46.64%), Query Frame = 2
Query:  254 WLGIGIQKGGTTTLFQRLYGHPASFMGA-KEMGFFLKVKLDEMEPVDAKKWFADLHWWNTYTVDKGMRR--------GEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMRKRLGIKEQLKGTFELSIMREYDTIVRCQRLYRGMEDPLAWYTDCYHQVFPHVGCLGHGLYYTHLLLWYRYYPPCSVLVLDQADL----NRPGTDQCIYSHLDMRPYDFELTQGRNTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            +L IG QKGGTT+L++ L  HPA+     KE+ +F       +E      W+  L  +   T    +RR        GE+TP Y   PRVP RV       ++ V +LRDPV RAYS YQM+ R G + +   +FE ++ RE +   R   L R + DP         + +     +  G Y   L  W +++P   VL+L   DL    +  GT   + + L +  +  E    R+         EY   +PM P  RDRL   F+P N +LEE++GR   W
Sbjct:   32 FLVIGAQKGGTTSLYRYLDEHPAALCATPKEVHYF------NVEYHRGPGWY--LAHFPLATRGAAVRRRLGVRPAVGEVTPAYLFHPRVPERVHAFAPG-LKLVAVLRDPVERAYSQYQMQLRGGTETR---SFEYALEREEEEWPR--ELERLLADPAYVSPTGLQRSY-----VARGRYVEQLERWLQFFPREQVLILTSDDLXXXDDPTGTMAAVAAFLGIPAWQAETYPRRSVR-------EY---EPMAPEIRDRLARTFEPHNHRLEEVLGRRVPW 285          
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: A0A7C4PBN2_9CHLR (Sulfotransferase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C4PBN2_9CHLR)

HSP 1 Score: 96.7 bits (239), Expect = 2.540e-18
Identity = 85/279 (30.47%), Postives = 130/279 (46.59%), Query Frame = 2
Query:  254 WLGIGIQKGGTTTLFQRLYGHPASFMG-AKEMGFFLKVKLDEMEPVDAKKWFADLHWWNT-YTVDKGMRR-----GEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMRKRLGIKEQLKGTFELSIMREYDTIVRCQRLYRGMEDPLAWYTDCYHQVFPHV--GCLGHGLYYTHLLLWYRYYPPCSVLVLDQADLNRPGTDQCIYSHLDMRPYDFELTQGRNTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            +L +G QKGGTT+LF  L  HP  +    KE+ FF               +F  L W+   + + + + R     GE TP Y   P  P R+ + L + +R +VLLR+PV RAYS YQ   R G +E L  +FE ++ +E + +        G  + +A   D Y+    H+    L  G Y   L   +  + P  VLVL   DL      +  +  LD      +L +      +  K+  Y+K   +DP  R RL + F+P+N +L + +GR F+W
Sbjct:   37 FLIVGTQKGGTTSLFNYLIQHPRVYAPFRKEIKFF------------DSNYFNGLSWYQAHFPLRRKLERERALTGEATPYYMFHPTAPERISQALPE-VRIIVLLRNPVDRAYSHYQHMVRAG-RETL--SFEEALEKESERL-------DGEAEKIA--ADMYYPQAAHIYYSYLARGRYIEQLPKLFSLFSPEHVLVLRSEDLYT-SPRETFFQTLDF----LKLPRWEPPKYEVFKQGTYDK--TLDPKLRQRLAEYFRPYNRQLYDFLGRDFEW 283          
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: A0A7W3STK9_9BACL (ABC-type polysaccharide/polyol phosphate transport system ATPase subunit n=1 Tax=Fontibacillus solani TaxID=1572857 RepID=A0A7W3STK9_9BACL)

HSP 1 Score: 99.8 bits (247), Expect = 5.370e-18
Identity = 90/281 (32.03%), Postives = 136/281 (48.40%), Query Frame = 2
Query:  242 TDYHWLGIGIQKGGTTTLFQRLYGHPASFMGA-KEMGFFLKVKLDEMEPVDAKKWFADLHWWNTY---TVDKGMRRGEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMRKRLGIKEQLKGTFELSIMREYDTIVRCQRLYRGMEDPLAWYT-DCYHQVFPHVGCLGHGLYYTHLLLWYRYYPPCSVLVLDQADLNRPGTDQC--IYSHLDMRPYDFELTQGRNTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            T+  +L IG QKGGTT+L+  L  HP     A KE+ +F     DE       ++     W+  +    +  G   GE +P Y   P+ PRRV ++L + ++ +VLLR+PV RAYS Y+M  R G+ EQL  +F  ++  E+D   R    Y  M    ++ + DC      H   L  GLY   L  WY+Y+P    L+L+   L +   + C  IY+ L++  ++             ++  E   E P D +T   L+D F   N KL EL+G  +DW
Sbjct:  350 TEPDFLIIGTQKGGTTSLYHHLTHHPNIKAAAVKEVHYF-----DE-------QFGRGFDWYKRHFPSNLSAGSITGEASPYYLFHPQTPRRVHELLPN-IKLIVLLRNPVYRAYSHYRMMVRRGL-EQL--SFPEALQAEHD---RVNDEYERMARDSSYLSPDC-----SHYSYLKRGLYAEQLEGWYQYFPKEQFLILNSEKLFQNPVEGCRKIYTFLNIPTWE-------RGDFPHLQEGEEGAEIPADTLTW--LQDYFTEPNRKLFELIGEVYDW 597          
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: A0A517ZD72_9PLAN (Sulfotransferase domain protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZD72_9PLAN)

HSP 1 Score: 95.5 bits (236), Expect = 7.270e-18
Identity = 82/278 (29.50%), Postives = 131/278 (47.12%), Query Frame = 2
Query:  254 WLGIGIQKGGTTTLFQRLYGHPASFMG-AKEMGFFLKVKLDEMEPVDAKKWFADLHWWNTYTVD-----KGMRRGEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMRKRLGIKEQLKGTFELSIMREYDTIVRCQRLYRGMEDPLAWYTDCYHQVFPHVGCLGHGLYYTHLLLWYRYYPPCSVLVLDQADLNR--PGTDQCIYSHLDMRPYDFELTQGRNTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            +L IG QK GT++L++ L  HP       KE+ +F      ++     + W++  H+      D     +G   GE +P Y   PRVP+RV  ++ D ++ +VLLR+P+ RA+S Y  + R G +E+L  +FE +I  E + +        G E+ L     C      H      G+Y   +  W   +    +LVL+ ADL R  P +   + S L + P++ E++   N  S       Y    PM   TR RLR+ F+P N +L   +G  + W
Sbjct:   43 FLIIGGQKCGTSSLYRYLISHPQIEPSLTKEVHYF------DLHYGKGEAWYS-AHFPRCDRADERGLERGFLTGESSPYYLMDPRVPKRVADLIPD-VKLIVLLRNPIDRAFSHYHSQVRRG-REKL--SFEDAIDTEPERLA-------GEEERLLADPSCTSSAHRHFSYTAKGIYIDQIERWLEVFDRERLLVLNTADLRRDAPRSVARVESFLGLEPHEIEVSTAHNVGS-------YA---PMHESTRARLREFFRPHNERLFAFLGEEWTW 292          
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: A0A0F5YPD1_9CYAN (Sulfotransferase n=2 Tax=Limnoraphis TaxID=1332112 RepID=A0A0F5YPD1_9CYAN)

HSP 1 Score: 92.8 bits (229), Expect = 3.240e-17
Identity = 82/278 (29.50%), Postives = 132/278 (47.48%), Query Frame = 2
Query:  254 WLGIGIQKGGTTTLFQRLYGHPASFMG-AKEMGFF---LKVKLDEME---PVDAKKWFADLHWWNTYTVDKGMRRGEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMRKRLGIKEQLKGTFELSIMREYDTIVRCQRLYRGMEDPLAWYTDCYHQVFPHVGCLGHGLYYTHLLLWYRYYPPCSVLVLDQADLNRPGTDQCIYSHLDMRPYDF-ELTQGRNTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            +L IG+QKGGTT+L+  L  HP  +    KE+ FF       L E     P   KK++  +     +        GE TP Y   P V +RV KIL + ++ ++LLR+P+ RAYS YQ   +LG ++ L  +FE +I +E + +           D +   T      + H   L  G+Y + +  W + + P   L+L   DL    T   +Y     +  DF  L +    + +   R++Y+    ++P TR +L + F+P N +L E +G  +DW
Sbjct:    7 FLIIGVQKGGTTSLYNYLIQHPCIYPAYTKEVHFFDQHFDQGLTEYRSYFPTGFKKYYQTIFKKQKFIT------GEATPYYIFHPLVAQRVAKILPN-VKLIILLRNPIDRAYSHYQHEVKLGFEKIL--SFEDAISQEDERLAE-------EVDKMMQNTSYNSYNYQHYSYLSRGIYLSQIQKWQKVFKPEQFLILSIDDLLINPT--LVYK----KTLDFLGLPEWYPKTFEKYNRNQYST---LNPETRQKLVNYFQPKNQQLYEYLGIQYDW 259          
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: A0A8K1FKH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKH6_PYTOL)

HSP 1 Score: 97.1 bits (240), Expect = 4.690e-17
Identity = 91/333 (27.33%), Postives = 145/333 (43.54%), Query Frame = 2
Query:  251 HWLGIGIQKGGTTTLFQRLYGHPASFMGAK-EMGFF-------LKVKLDEMEPVDAKKWFADLHWWNTYTVDK-------------GMRR---------------------GEITPNYQTQ-PRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMR-------KRLGIKEQLKG-TFELSIMREYDTIVRCQRLYRGMEDPLAWYTDCYHQVFPHVG-------CLGHGLYYTHLLLWYRYYPPCSVLVLDQADLN-RPGT---DQCIYSHLDMRPYDFELTQGRNTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            +W+ IG QK GTT+L+  L  HP +  G + E  FF       L+ KL E +    K   A+       +  +             GMR                      GE TP+Y     RV RR++ +  + M+ +V+LRDPV RAYS +QM         +L ++E ++G +FE  +  +   +         +E   +   DC+      +         +G GLY   L LW R +P   +L++D  D+  R GT       +  + + PY+ E  + +NT +           +P+DPV + RLR+ + PFN +L EL+G+ F W
Sbjct:  351 NWVIIGAQKCGTTSLYDYLSQHPMAAKGKRREPHFFDWRWDAALEHKLSEADGATYKAILAEYAAARKDSASEEAVVKELRGNSLDGMRAKYLSSLQCEEPALAIRPPKQIGESTPSYLLYGERVARRMRMLYPN-MKLIVMLRDPVKRAYSHFQMTADPNGTPSQLKMREPVRGKSFEQLVEEDLALLKAASVSSAPLESVESAAADCFQSYADGLSQQHGAHSYVGRGLYALQLALWLRVFPRDQILIIDLDDMKTREGTLREANKAFEFVGLEPYEVEDAERKNTRA----------YEPIDPVIQQRLREFYAPFNEQLFELIGQRFHW 672          
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: Q1ARH1_RUBXD (Sulfotransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) TaxID=266117 RepID=Q1ARH1_RUBXD)

HSP 1 Score: 92.0 bits (227), Expect = 5.070e-17
Identity = 85/286 (29.72%), Postives = 132/286 (46.15%), Query Frame = 2
Query:  233 RERT---DYHWLGIGIQKGGTTTLFQRLYGHPA-SFMGAKEMGFFLKVKLDEMEPVDAKKWFADLHWWNTYTVDKGMRRGEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMRKRLGIKEQLKGTFELSIMREYDTIVRCQRLY---RGMEDPLAWYTDCYHQVFPHVGCLGHGLYYTHLLLWYRYYPPCSVLVLDQADLN-RPGTD-QCIYSHLDMRPYDFELTQGRNTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            R RT   D  ++ IG  + GT+  ++ L  HP   ++  KE+ FF      +       +W+  L  +     ++ +  GE TP Y   P VP R+ ++L D ++ +VLLR+PV RAYS Y + +R G++E            E++ ++  +R +     +EDP A          P    L  G+Y  HL  W+R+YP   +LVL   D   RP          L +  + F L   R        R EY    PM+P TR  L   F+P+N +L + +GR+F W
Sbjct:    4 RRRTRVPDPDFIIIGAPRCGTSVFYRLLCRHPKIKYVPKKEIHFF------DWNHERGLEWY--LSQFGHVPEERIV--GEATPRYLAHPEVPERMVRVLPD-VKLIVLLRNPVDRAYSHYHLLRRRGLEE------------EFEAVLETERGWLEENSLEDPSA----------P-TNLLTTGIYVEHLKRWHRHYPREQLLVLKSEDFYARPRRALSTTREFLGLPEHRFNLRIRR-------ARHEYA---PMNPETRKELVRFFRPYNEELYDYLGRSFGW 245          
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: A0A7Y3GE17_9DELT (Sulfotransferase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GE17_9DELT)

HSP 1 Score: 91.3 bits (225), Expect = 1.070e-16
Identity = 89/272 (32.72%), Postives = 116/272 (42.65%), Query Frame = 2
Query:  254 WLGIGIQKGGTTTLFQRLYGHPASFMGA-KEMGFFLKVKLDEMEPVDAKKWFADLHWWNTYTVDK-GMRRGEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMRKRLGIKEQLKGTFELSIMREYDTIVRCQRLYRGMEDPLAWYTDCYHQVFPHVGCLGHGLYYTHLLLWYRYYPPCSVLVLDQADLNRPGTDQCIYSHLDMRPYDFELTQGRNTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            +L +G QK GTT+ ++ L GHP     A KE+ FF             + W   L  +     D+ G   GE TP Y   P VP RV KI  D  RF+VLLRDP+ RAYS +QM++RLG +E L  TFE +I  E       QRL     +             P    L  G Y   L  W+  +     LVL+ A L     +         R  DF         + W  R   +   P+ P TR+ L   F+P N  L  L+G  F W
Sbjct:    7 FLVLGAQKCGTTSFYEFLCGHPQVTPAAEKELHFF------------DRDWHTGLDAYRECFRDEPGTITGEATPYYLFHPEVPDRVAKIAPD-ARFLVLLRDPIDRAYSHHQMQRRLG-RENL--TFEAAIEAEP------QRLATSAANR------------PRYSYLARGRYVEQLERWFDRFGRGRFLVLETAALRERPAESA------SRVADFLGIDAFPADAVWPSRGRSSYA-PLSPATREALAVHFEPHNEALFRLLGERFAW 237          
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: A7BWS1_9GAMM (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1 heparin-glucosamine 3-O-sulfotransferase n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7BWS1_9GAMM)

HSP 1 Score: 92.0 bits (227), Expect = 1.150e-16
Identity = 82/290 (28.28%), Postives = 136/290 (46.90%), Query Frame = 2
Query:  251 HWLGIGIQKGGTTTLFQRLYGHP-ASFMGAKEMGFFLKVKLDEMEPVDAKKWFADLHWWNTYT-------VDKGMRRGEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMRKRLGIKEQLKGTFELSIMREYDTIVRCQRLYRGMEDPLAWYTDCYHQVFPHVGCLGHGLYYTHLLLWYRYYPPCSVLVLDQADL-NRPGT------DQCIYSHLDMRPYDFELTQGRN----TSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            H++  G+ +GGTT+L+  L  H   +    KE+ FF              ++   L+W+  +        V K    GE +P+Y   P VP R+K+IL   ++ ++LLR+PV RAYS Y M+ R G +E L   FE+++  +    +R   L+   ++ +    + + +V+     L  G+Y+ HL  W+  +    +LVL   D    P T      +    S   ++ Y+     G++    +S D +K     K + MD   R +L D FKP N +L EL+ R F W
Sbjct:   30 HFIIFGVARGGTTSLYNYLTAHSHIASATTKEIMFF------------DHRFHLGLNWYKAHFPTFIYPWVKKPFVTGEASPSYLYHPMVPARIKEILPA-IKLIILLRNPVDRAYSHYAMKLRQG-QETLP--FEIAVKHQ----LRELELFE--QERILGNDNYFQRVYHPQAYLSKGIYFVHLRRWFSLFNKDQILVLQSEDFYTDPETILQKTLEFLELSKSTLKKYEQYNADGQHFALTSSKDKLKG---KKHEQMDSSFRQQLIDYFKPHNQRLYELLDRDFGW 294          
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Match: A0A3N5R537_9CHLR (Sulfotransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5R537_9CHLR)

HSP 1 Score: 90.5 bits (223), Expect = 1.670e-16
Identity = 87/282 (30.85%), Postives = 127/282 (45.04%), Query Frame = 2
Query:  254 WLGIGIQKGGTTTLFQRLYGHPASFMGA-KEMGFFLKVKLDEMEPVDAKKWFADLHWWN----TYTVDKGMRR---GEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMRKRLGIKEQLKGTFELSIMREYDTI-VRCQRLYRGMEDPLAWYTDCYHQVFPHVGCLGHGLYYTHLLLWYRYYPPCSVLVLDQADL--NRPGTDQCIYSHLDMRPYDFELTQGR-NTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEELVGRTFDW 1063
            +L IG Q+ GTT+L+  L  HP       KE+ FF               +   L W+       T   G RR   GE TP Y   P   RR+ ++    ++ +VLLR+PV RAYS YQ    LG++     +FE +I +E   +    ++LYR        Y    HQ   H   L  G Y   L  W +++P   +LVL   DL  +R      +   LD+   D++L + R +    ++          M+P TRDRL   F+P+NL+L E + R F W
Sbjct:    4 FLIIGSQRAGTTSLYSYLSTHPNIHRAILKEVHFF------------DNNFHKGLDWYRGNFPLLTSKNGDRRIITGEATPYYIFHPHAARRIAEVFPS-IKIIVLLRNPVDRAYSHYQHEVGLGVESL---SFEEAIEKEEMRLDSELEKLYRDEN-----YLSFNHQ---HFAYLSRGRYAEQLKHWSKFFPNEQILVLKSEDLFQSRQEIFSKVLKFLDLP--DWKLPKSRVHNQLQYLG---------MNPSTRDRLCAYFEPYNLELNEYLSRDFGW 250          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F2XQH4_9ACTN1.400e-1832.16Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A7C4PBN2_9CHLR2.540e-1830.47Sulfotransferase n=1 Tax=Anaerolineae bacterium Ta... [more]
A0A7W3STK9_9BACL5.370e-1832.03ABC-type polysaccharide/polyol phosphate transport... [more]
A0A517ZD72_9PLAN7.270e-1829.50Sulfotransferase domain protein n=1 Tax=Maioricimo... [more]
A0A0F5YPD1_9CYAN3.240e-1729.50Sulfotransferase n=2 Tax=Limnoraphis TaxID=1332112... [more]
A0A8K1FKH6_PYTOL4.690e-1727.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
Q1ARH1_RUBXD5.070e-1729.72Sulfotransferase n=1 Tax=Rubrobacter xylanophilus ... [more]
A0A7Y3GE17_9DELT1.070e-1632.72Sulfotransferase n=1 Tax=Myxococcales bacterium Ta... [more]
A7BWS1_9GAMM1.150e-1628.28Heparan sulfate D-glucosaminyl 3-O-sulfotransferas... [more]
A0A3N5R537_9CHLR1.670e-1630.85Sulfotransferase n=1 Tax=Chloroflexi bacterium Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:884239..894796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.6
Seed ortholog evalue5.4e-18
Seed eggNOG ortholog65071.PYU1_T014081
EggNOG free text desc.Sulfotransferase family
EggNOG OGs1MD8B@121069,2CN6N@1,2QU6N@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size2420
Cds size930
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.9073513-UTR-S-ischiensis_contig11:884238..8843801622815593.9073513-UTR-S-ischiensis_contig11:884238..884380Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 884239..884380 +
1695739791.4818728-UTR-S-ischiensis_contig11:884238..8843801695739791.4818728-UTR-S-ischiensis_contig11:884238..884380Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 884239..884380 +
1622815594.0297422-UTR-S-ischiensis_contig11:893448..8947961622815594.0297422-UTR-S-ischiensis_contig11:893448..894796Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 893449..894796 +
1695739791.56759-UTR-S-ischiensis_contig11:893448..8947961695739791.56759-UTR-S-ischiensis_contig11:893448..894796Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 893449..894796 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.9206634-CDS-S-ischiensis_contig11:884380..8844821622815593.9206634-CDS-S-ischiensis_contig11:884380..884482Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 884381..884482 +
1695739791.4917905-CDS-S-ischiensis_contig11:884380..8844821695739791.4917905-CDS-S-ischiensis_contig11:884380..884482Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 884381..884482 +
1622815593.9358985-CDS-S-ischiensis_contig11:886567..8866661622815593.9358985-CDS-S-ischiensis_contig11:886567..886666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 886568..886666 +
1695739791.499833-CDS-S-ischiensis_contig11:886567..8866661695739791.499833-CDS-S-ischiensis_contig11:886567..886666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 886568..886666 +
1622815593.9480405-CDS-S-ischiensis_contig11:887509..8876111622815593.9480405-CDS-S-ischiensis_contig11:887509..887611Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 887510..887611 +
1695739791.5082839-CDS-S-ischiensis_contig11:887509..8876111695739791.5082839-CDS-S-ischiensis_contig11:887509..887611Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 887510..887611 +
1622815593.9644525-CDS-S-ischiensis_contig11:889005..8891361622815593.9644525-CDS-S-ischiensis_contig11:889005..889136Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 889006..889136 +
1695739791.524066-CDS-S-ischiensis_contig11:889005..8891361695739791.524066-CDS-S-ischiensis_contig11:889005..889136Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 889006..889136 +
1622815593.9804506-CDS-S-ischiensis_contig11:891066..8912251622815593.9804506-CDS-S-ischiensis_contig11:891066..891225Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 891067..891225 +
1695739791.5350626-CDS-S-ischiensis_contig11:891066..8912251695739791.5350626-CDS-S-ischiensis_contig11:891066..891225Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 891067..891225 +
1622815593.998959-CDS-S-ischiensis_contig11:892195..8924061622815593.998959-CDS-S-ischiensis_contig11:892195..892406Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 892196..892406 +
1695739791.545938-CDS-S-ischiensis_contig11:892195..8924061695739791.545938-CDS-S-ischiensis_contig11:892195..892406Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 892196..892406 +
1622815594.0157526-CDS-S-ischiensis_contig11:893322..8934481622815594.0157526-CDS-S-ischiensis_contig11:893322..893448Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 893323..893448 +
1695739791.5569282-CDS-S-ischiensis_contig11:893322..8934481695739791.5569282-CDS-S-ischiensis_contig11:893322..893448Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 893323..893448 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2069.1prot_S-ischiensis_contig11.2069.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 884381..893448 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2069.1

>prot_S-ischiensis_contig11.2069.1 ID=prot_S-ischiensis_contig11.2069.1|Name=mRNA_S-ischiensis_contig11.2069.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=310bp
MLNGDPSSVEDMYQVAMDHGPCGRQDQELYRERTDYHWLGIGIQKGGTTT
LFQRLYGHPASFMGAKEMGFFLKVKLDEMEPVDAKKWFADLHWWNTYTVD
KGMRRGEITPNYQTQPRVPRRVKKILGDPMRFVVLLRDPVSRAYSFYQMR
KRLGIKEQLKGTFELSIMREYDTIVRCQRLYRGMEDPLAWYTDCYHQVFP
HVGCLGHGLYYTHLLLWYRYYPPCSVLVLDQADLNRPGTDQCIYSHLDMR
PYDFELTQGRNTSSDWIKRDEYNKEDPMDPVTRDRLRDLFKPFNLKLEEL
VGRTFDWGY*
back to top

mRNA from alignment at S-ischiensis_contig11:884239..894796+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2069.1 ID=mRNA_S-ischiensis_contig11.2069.1|Name=mRNA_S-ischiensis_contig11.2069.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=10558bp|location=Sequence derived from alignment at S-ischiensis_contig11:884239..894796+ (Schizocladia ischiensis KU_0333)
TGCGGCTGCCGGCCTCAGGGGCTCAGCGCCTGGGGGTGTCAGCACTAACA ACACGGGCGAGGCTGCCGCGGCGGTCGTGGAAGTGCGCAGGAGCAAGAAT GGTGCGCCGGCGTGTCCAGCCGAGGCCCTTGGGCTTGGGTGGATGCTGAA CGGCGACCCTTCCAGCGTCGAGGACATGTACCAGGTGGCCATGGACCATG GGCCGTGTGGGCGGCAAGACCAGGAGCTCTACCGCGAGCGGACGGTGAGC GGGGGGGCGGAACGAGGGGGGCGGGAGGCGCTTGGTCGGGCGACTGACTG ACTGACTGTCTGGCTGACTTGCTCAGTCACGACAGTTTGCAGTAATACGA GCAGTGGTGCAGTGTAGTATGTATACTTCGCAGTATGTACTACTGTACTC ACGTTGTGCTTGCCGTAGTCCCGAGACCATTGACCACGCCAATCGGTCGA GACGGAGCCGTACGGTACAATAGTGCGCCTTTGCTCCTGTCTCTTTTCCG CGCCTGTGCAGCACCGCACGGTATTCCATACACCCATGTGTGTACAGCAG TATACACTGCGGTACTTGTGCCCGTTGTACGTACCTGCTGTAGTGTGGCC TGTCTTGTGCGGCCACCCAGCCCCGGAGCACTGCCAGAAAATGGCAGTGT GTCGTACTTATGCACTACTGGTACTAGTACAGTGGCCGAGTACGTGGAAG TATGTACATACACCTATTGTGCGAGTACTGGTGCTTGGAAGTACGTGATG GGTACTGGTGCAGTGTGGGAGTCCTCTGAGGGGATCGCTATCGAGTACCT CGCGTGAGCACTATTCTTGTGCGGGACTGCATGTGCAGTAGTGTACTCTC GTACATTTGGGACATGCGAGTACTTCAAGTACTTGGTAGTAGGGTAAGTT CCTTGCGTACTCGAGTAGAGTAAGTTATGTAGACACCGGCAGTAGCCATA GCTGGAAAAAATAAAAATGAGTGCAGTGCGTAGCCGGCAACACGTGGTGC TATGGAATATAAATATTTCGAAATGCCTCGAACAGGTTTTATCGGTCAGT GGCACCTGTCAGGCAGTCAACCCTTGCACGTGAAGGACGGCAGTAAGTAG CTCGAGGGCGTAAATTATATCTTGTGGCTTGTTCTCGATAGTAGGACTTT GGTGCAGAATCAAGTACAGTAACTAGTATACCTTCGGTACGCGGGGTCAC TGGTCTCGGGCCTACGGCAAGCACAGTGTGAGTATATACTGTTGTTTTTA TACAAGTGTACGCTAGTACACTACTGTACTGTAAAGCGTGTTGCGGCATG TGGTACTGCTGCTGGGGTGCAAGGGTAGGATTTCGGTGGGTAACTAATTA CCTTCCACGTGAGTACATATGCACATTGGGAGGGAGGGGTCCTGCTCCGT CTCGGCAGAGGCGTGCGGTGAATGGTCTCGGGACTACGGCAAGCACAACG TGAGTACTCGAGTACGAGTACATACATGCATGCTCGAGTACATACATATA GTGCTACTTAGAAGTACATAATACTGTATGCAGTTGGGGGCAATGGTGTG CGTACGGCTGTCTGTAGGGGGTTACTGCTCCCGAAACGAACACTCCATGT AGTGCACAGCTACTACTTATCAGTATATACTGCGGTACATATGTATGTAC TCATCGGCTTGTCTTGCGACACCACCCTTGCGTGCATTGCCGACAGCCCT ACTCGTAGGTCGAAACTTCGGGTTTCCCTATACTAGAGTACTGTACGAGT ACAGCATATACTATATGTACTTCCGGACGTAGTCACTGCTGTACTGTACA TGGTAGAGCTTCGAATCGGCCCGTTTTCTTTCAATGTTGGCTCGGTTTTC AACCCATGGCCGATAGTCGATTGGACGAGCGCCCGTTTTTTGTATTCTCC ACTCCTTCAATATCGTGCATATTTGGACGTGAAGCGTAGCCGGTACGCCC CTCCTTACCGGTAATGCCGGTCGCCATCCATCCAAGGTAGCCGTTACCGG CAATACTCAGGTACACCGAAGAAAACCGAAACACCGAATCGGCCTTCCCA AAAAGTACAACACCGAGAAAATGCCGAGAACCGAATCGATCGCTAGGTCG GGGCCGAGAATCATCGATTTTTGACCTACCGGTTCACAGTTGTCATAGCA ATAAGCGTACAGTAGTACTCACTGTCGTTGCAGGCCTGCCCGTTAGCAGT GTGCTGAGGCACAGTGGCACATGAACACGCAGCATGGGAGGAAGTAGCGA TAGGACGAAGTTTGTTTGTTGTACGGTGGTTGACCCTGTTGGTCGCGGCG CTTGTTTTTGTGTTTTGTTTTGTTTCCAGGACTACCACTGGCTGGGCATT GGCATCCAGAAGGGGGGGACCACCACTCTCTTCCAGCGCCTGTACGGCCA CCCTGCGTCCTTCATGGGGGCCAAGGAGGTGAGACATGTATATGTACTCA CTCGTTTGTCTTGCGTCATAGCCTTGCGTGCAATGCGACATGTATATGTA CTCACTGGTTTGTCTTGAGCATAGCCTTGCGTGCAATGCCGACAGCCCTA GGTTGAAACTTCAGGTTTGCCCTCCGACAGTACTGTATATATCTATAAAC TCCGAGTAGCTACTGCAGTTTCTAGGCTTTCCCTCCGACAGTACTGTATA TATCTATCAACCCCGAGTAGCTACTGCAGTAGCTACTGCAGCTACTATTG CAGTTACTAGGTTTGCCCTCCGACAGTACTGTATATATCTATAAACTCCG AGTAGCTACGGTACATTTACTAGGCTTTCCAAGCTTACGATTGCTTTTTG TCAGAACAGCGGAGAACGCTGGTCGACTGCAGCAACCGTAGAGGTTGCCA CTGCAACAGTAGTAGTACTGCAATAGTAGCGGTCGACAGGCATTCCCTGC TGTGCTGACACAAAAGCACTATGGTCCTAGAGGGTTGCCTTGTAAAGTAC TTCGAACTACTTGCTCAGTACACACTCCCAAGCGCTCACGCTGTGTACTG TACACACTGTACTGTACATCTTCAAGTATACTACTGCTTGCACTACTTTT TGACAGTTCTTCCGAGTTTCTTTTTCAGAGTAGTACCTGCTCCGTCTCGC ACGAGGCACGGGGTCAATGGTCTCGGGACTACGGCAAGCACCACGTGAGT ACATATAGTACCTGGACAGTACAGCAAGAGTGGCGTAGGTGCTTGTGCAC ACGAACGGAACCCTACTACTGTACCTACTGTGATGCGAGGTTCTTATTGT TCATCTGCTCGGACGGTGCAGATGGGGTTCTTCCTCAAGGTGAAACTGGA TGAGATGGAACCCGTGGACGCCAAGAAATGGTTTGCAGACCTGCACTGGT GGAACACCTACACCGTTGACAAGGTGAGACAAGAGGCGGGGGGAAGAGTG AGTGCTTGCTGTGTAGCCGCGTGTATTGTACAGTAGTAATGTTCTCGTAC AGTACAGCGCAGTACAGTAGGGTCAAGCGGGAAGTACAGATGTGTACTGT ACGTGCTTGTCATACTCCTGCATAGTGCAGTACTCTAGTACTGGTATACG CAGTATACAAAGGTATATATATGTGTATGTACTCACGTGGTGCTTGCCGT AGGGCCGAGACCATTGACCCCGCGTCTCGTTCGAGACGGAGCAGGACCCC TCCCTCCACTGGCAGAGCCAGGGTGGGAGGGGGTAGCCACCCCCCCGCCA GAGGCGGAGGGGTGGCCAAGTCCACACCGAAGGTACATGCAGTTCACAGG TTGAGCCCAATGGCCGGAAGGGTTTGTACCCTGCGGGGGCTGGCCGGTGG TTGGCGGAATGCGCAGGACGGGGTGTAGTAACAACCCTGTCCAATGTGAG TACCCACACGGGCCGAGGCGCTAGGATTGCTCGTACTCGTACATGCTACA GTGTGCGAGTACCATATGGTTTTATATGCAGTATGCCGGTCGAGGCGCTG TGGGGGTCAATGGTCTCGGGACTACTGCAAGCACAGCAGGAGTACATACT TGTATATGTACAGTATGTACAGTATATCTCTGCTCCGTCTCGATCGAGGC GCGTGGTCAATGGTCTCGGGACTATGGCAAGCACAACGTGAGTGCATATG TACTTTGAATATATACATATATACTCACACCTAACGGTCTTGCCGTAGGC TCGGGACCATTGCGCCTCCACCGAGACGGAGCAATATATAATACTTGGAA GTAACAAGTACAGTATATATACAGGGATGGGGGGGGTATGGACTTGGCCA CCCCTCCGCCGCTGGCGGGGGGGTGGCCACCCCCTCCCACCCTGGCTCTG CCAGGGGAGGGAGGGGTCCTGCTCCGCCTCGCACGAGGCTCGGGGTCAAT GGTCTCGGGACTACGACAAGCACCACGTGAGTACTTACATATATACAGTA TGCCGTACAGTACAGTACGAGTACACTACTACGAGAACGCGCTAGTGTGG TAGTGTACCGCAGTGATCTACCGCGCCGTAGCGCCTATAGCAGTGTTTGA TCCGGCTCGGAAGGCGGTTGGTACTCCTGCTGTACCAGTACAGTCCATGG GCCTACGAGGACCGCTTCTGCAACTGTACTCCCAAGCACTCGTAGAGAGG TTTGCTACTGTACTGTACAGTACTGGCCGCGCGGGACTACAATAGCGCTG TGCTTGTGCCCCCGTACTTGGAGGTACTATTAGCCATTGCATGTATTCCC ACCCTTATACTCGTACTCTTATTGTGCCCTCGTGCGCCCGTCGCGATGGA TGCCCGTGCCCCCGCAGGGCATGCGGCGGGGGGAGATCACCCCCAACTAC CAGACCCAGCCAAGGGTGCCTCGGCGCGTCAAGAAGATCCTGGGTGACCC CATGCGCTTTGTCGTGCTGCTCAGGGACCCCGTGTCTAGGGCGTACAGGT GTGCAATCGTCAAGGGGGCCTTCTCGTGTGTTTAGAAACCGAGTGCCCTA ACTACAGTGCTTGGGCAGTGGTCTATACTTCGAAGTATGTACTTTGTATG CACTCACTGGCTTGTCTTGCGGCATAGCCTTGCGTGCATACTGTAGCAGC CGACAGGCATAAGTCGAAACTTCGGGTTTGCCCTCCGACAGGAGTAGCTA CGTAGCTATTTAGCCATGGACTCTGTGTGAGACTCATTCCCCTAGCTACT GTAGTAGCACCTACTGGTTCTGTTCTCGTTGGGAGCGGAGACAAAAAAAC ATGTACTTGGAAGTAATCCCTGTGCTCGGAAGTGCTCCAAGTACTACTGT ACAACACGCCTGGCCGGCGGTTGAAACCCCGGCATGCCTCGTCACGGCAT AGTGGGGACACGGGGCCAATGGCTGACAGGCTGCCCCCGCACCGTGCGGG GGCTGGTGATGGGTGGTCCCGCGAGTAGGTAGTGTACTGCTGTGATGCGA TGTGCTGTGACTGATGTCAACTGCAGTGATGTGATGTGATGCGATGCGAT GTGATGTGATGTCCACTCTTGCGTACAGCAGTTTCACATCACATCACACC ACAGTCCAGAACGGAGTGGGTGGTTGGTGGCGTGCACAGGACGTGGGGTA ATAGTAACCCTGTCCGACATGAGTACGCACTCGAGTATGGAAGCGTGTAC TCATGTCGCTATGTGTGCCCTGGACCCGAACGATCCGCGTCTTTGCTCCT TCTCGTGGATCGCTGGCCAGCTGTAGCCGAAGCCGTTGGCCACGCCGAAC GTATCACGTGGAAACCTTGCACTCGCACCTCAGCTTTCGGAACGTCGCTA AGGCCCAAAAAACGGTGGCCCTTGCTCGAGTGGCTCGCCGGGGAGGGGGT GTGTGAGGGAGAGGGGGGGGGGGGAGGAGGATTGAGGAGGTCCTATTGGA AGTACCGTATATACACTTGCTGTACCCCTGTACTAAGCAAGTACTGTTCG ATTACGTAACTGTATGCGAGTTCCGGGCCCCGTCCCAAAGCCAGACCTGA CCGGTAGGCCCTAAAGGTATTTCTCTTCTCATTCAGTACAATACTGTGCA GAGTATATGTGCTTCGAATTGTGTGTGTGTGCTCACATTGTGCTTGTCGT AGTCCTGAGACCATTGACCACACCCCTCGACTGACTATATATACGAGTGC TCGAACACACACACACACACACATATACTGTATACGAAGTATGTATGAAG TGTACGGGGCAGGCAGTGCGGGCCGCCAAAGGGTCTTGTCTCCCTTTCGA GAGGTGAAATCGGCACCGTGTTGAGGTGTTCGGTTTTGGGAAGCTTACAA TGGTCCTTTGGTCCGGGTGTGCCTGACCTCTCTTCGTTTCAGGTTGTTTT GTATCGTATTGAAGGCGTTGTGTGTTTCATCTCCGCGAGGACTTGAAATC AGCTACGGGGGGGCCTGCGCGGTCTGGGGGCGGGATGGCTGCTGCATGTT AACCGTTAGAGGGGACTACTGTACTGTGCGGCATTGACTATTTCCATGCT GTGCTATTGGAGTGTCGTGTGGGATAAGTGTGCCGATAGTTGGTACAGCA GTCCTGCTGACGGCTACTGTAAAAAAAAAAAACGCCTTTTCACGGAGGGA GGTGTGTGTGTTATTATGATATGCCGCGAACTGCAGGAGCGTCGTGTGTG ATAGGCGTGCCGGCAGCTATTAAACACATGCAGCAGTCCTCGGGCGTGTT GTGAGATACACACAACCACGGCACGCTGTACGAGGCGTGTTGAAGAACAT GGTGCATTCTCTACAACGCATGTACTGTACTCGTTGCAGTGCAACCCTCG GCCCTCTCTCCCGCGCACCCACGCACCCACCCACCCACGCATGCCCCCCC CGCGACGAACGCGCCCCTGCGCGCGCAGCTTCTACCAGATGCGCAAGCGG CTGGGCATCAAGGAGCAGCTCAAGGGGACCTTTGAGCTCAGCATCATGAG AGAGTACGACACCATCGTCCGCTGCCAGCGCCTGTACCGCGGAATGGAGG ACCCCCTGGCCTGGTACACGGACTGCTACCATCAAGTGTGAGTACATACT ATGTAGTATATATTTTTTCTATTATATTTTCCTTTCCCTTTCTTTGCCCT TCTTTTTTGTTTTTTACTACTTCGAAGTGTTACAATAACAGTCAATGGCA CACACGTGCGATTGTACCTCGTTGCAATTTTATGTGAATCACAGTACATG TACTCACGTTGTGCTTGCCGTAGTCCCGAGACCATTGACCAAGTGTGAGT GCCGCTTGTACGGTACCTGTACAGTAGAGCAGTGTCGGGTTTGCTGTGAG ATGGGAAGGACTGCTACCACCAAGTGTGAGTGTGTGTACTCACGTTCGGA CGAGGCTTCTCGTCTCTGTGCATGCCGTAGACCCGAACGATCCTCGTCTT TGCTCCTTCTCGTGGATTGCTGGCCAGCTGTAGCCGAGGCCATTGGCCAC GCGTCCAATTGGACGGCGCACAGTGGGTGTTTCACCAACAGAAAATTGTG AGCGCTGCGTGTACGGTACTTGTAGATCAGTGTCGTCGTTTGCTGTGACT TGGGAAGGCCTGGTACACGGACTGCTACCACCAAGTGTGAGTGCCATGTG TACAGTACCTGTAGAGCAGTGTCGCGTTTGCGGCGAGACGGGAAAGGCAG AAGGCGTGGCGGCAAGGGCGGGGAGGGGCGGGCACATGTGCCGCGTCTCT GAATGTTCTGTGCTTGCTTTGGGGGGCAGCTCGCGCCTGCTTGCTTCCGT CACATCTGCCAAATAGGAATGTACGAGCAGTACCTACAGTAGTGTGCTCC ACGAGTGCCTCATTAATCTTTGCCTGCTCCGGACCCGGCAGTATGCCCTT GCCCTCCAGCAATTGCATGTGCCGTTCCTCCTGCCCCCCCCCCCCTCCCT GCCCCCGGAGCGCCTGCACCGCTTTGCCTTGCCTTGCTGCCTCCAACGCT GCCCCCGCCCCCGCCCCCGCCCGCGCCCTCCTCCTGCTCCCCCCGACCTG CCCACAGATTCCCGCACGTGGGCTGCCTGGGCCACGGGCTGTACTACACG CACCTGCTCCTGTGGTACCGCTACTACCCCCCCTGCTCCGTGCTGGTTCT GGACCAGGCCGACCTCAACCGGCCGGGCACCGACCAGTGCATATACAGCC ACCTGGACATGCGCCCGTACGACTTTGAGCTCACGCAGGGCCGCAACACC TCCTCCGACTGGATCAAGGTGAGGGGGCCGGCGAGGGAGCCACAAGGCAC GCTTTTGGGGGGGGCGTGACCGTGCTGCTAACGGTGCGCTGGCCATGTTC TGTGTTTGGGCCATATTGTAGTACTTCCAAGCACTTTGGAAGCATGAGTA CTCTTTTTGGAGGGGATACTCGAGTGGAAGTAGAAAGGCCTTTAGTAGAG CGAGCGGGCTGTTGGTCTTTGGGAAGTGCACGCGGCCCCGCGTGTTGCTT TGCGGATGGGAGGGCACGGATGGGCCTATTCGAGCCTATTTGAAGCGGAT TGGGTTGGGTTGGTGGTTTGTGGCTGCCGCGTGTGCCGCTTGTTGGCCAA GGGGCGGATCTGGAGGCAGAGTACGCGTCTCGTGCCGCGGGGAGGGTATG TCCCAGCCCGGTGCTGGTGCGTGTTCCATCAGGCCTGACCTTAATGCTTT GTACTTCAAAGTATTGTTCATGTATTTGAAAGTACTGTACTTGTCAGCAC GGTAGTTACCTTTGCACCAGCACTATGTACTTGTATGTATAGCACAGTTG CCTACTTTGGGTACGGGGTGCAAGTACCTGCAAGCACTTGGCTGCTGTAC CGTAGTTGCCGCCTGATTTGGGTGCACGGGTAGGTAGTTAGAGAAGGACA GTTGTGCAAGTGCTTGCGCACTGCGCACTGCATTGTGTCCGAGTGCCAGG CCATGGGCACCGATTGTGCGCTCGCTACTCACCCCCCCTGTCGCTGGCCG CGCTCGCAGAAGAAGGCCCGGGCCTGTATCCGCGTACACTCAGGTCAACG CCCCCAATCCTATACGCAGCGGCTCAGTTACAGCGCAGCAACCGCAAGCA ACTCGGGAGTACCCCCCCCTCCCCCCGCGCCCTGTCGGCCCCTCCGTGCC CACGCGTGCACTCAAACCTTTGCCCGGGCTCCAGAGGGACGAGTACAACA AGGAGGACCCCATGGACCCCGTGACGCGTGACCGCTTGCGAGACCTCTTC AAGCCCTTCAACCTCAAGCTGGAGGAGCTCGTGGGCCGTACGTTCGACTG GGGCTACTGAGCTTTGAGCCGCCGGGCGGCCCGGGGGGGAGGATGCCCCC CCGGCCCTGTGGCCGGCGTGTCACGGTTGAAAGTGCAGCCCGCGGCGGCT GCACTCCGCTGCACGGCGGGCGGTGCTGGGCCTGGCCTGCTGAGCCTGAC CTGTGTCACGGGTTTGTCCCAGTTCGAAACAGGTCTGTGAGAGAGCTGGT CAATTGTCGTGCGCTGGTTTGGCCCCCCGGGGGCGCACCACCTCTGCACG CCTGCGTGGCCACTACAGGCTTGGCCATAGCCATGTGGGCCCAGGGGGGG GGGGTCGGCCCTTGTACATGGACGGCGACAAAGGAGACTTGTTTGTGCAG CCACGCCTGTCGGGCGCGGCCATCGCTGGCAAACGCCTGTAACAGAGTCA CGGTTGCAAGGGTGGCGGCAAAGTGCACTCAGCTTGGGACGCCAGTGGCG GCGGCGGCGGTGGCGGCAGCAGCAGCGCTCGTGTACAGGAGTCAGCCTGA GTGCTGCTGAGTATAACTGCAGGCATCAGGGCTTGGGTCACGGGCAGCGG CCTCGTGGCCGACAGCCTGAGGTGCAGTGCAAGCCGCTATAGATACGTAG CGGTGAATGCCCCGGGCATTGCGGCAGGCACTGCAGGCCTGGGTGCATGT GCGCTCAGGCTGGTGTTCGCCAGGCTGGGTCTGTGTGATTCTGTCACGGT GCGCACCCTGACAATTGATTGCCCTGCAGTACCCAGTTGCCACCTTGACG GGAGCCCTGCAGCTGACACTTGACAAACTAGAAGTGTGCTCCCTTGAAAT AGTGAGGCCGGGAAGCCGCCAGGCATTGCAGTCCACCAGGCTGTCACCCG CCAATGGCGTGCCTCCAGGGGGGACCTGACAGTGTATTCGGATGTCGATT GGTAAGGATATTGGATTGTTTGTTTGAAGAATTGTATACATGTGCACGTG TGTGTGTGTTGTATGTGGGTGTGTGTTCATGTGTGTTCTTGAGGGTACCG TTGATGTTCAGTAGTAACTGATCTGTTTGATCCCGAAAGTTAAATTTGAG CTTGCACTTGACCTCCTCGAAGTCTTCAGCACTGCAAGTCACCGTGGCGG CCACTCAGGCTATACATGATGTAGTAAGAATGGCCAGGGCCAGCCTGAGT TAAATTTCCCTCCGACTCCGGGGGGAGAGTCAGACTGTGACGAATCCGGC ATGTCGAATGACAATGCCATGGTCTGCCTGCTGGTGCTCCCCCCACCACG AGCGTTACTTGTGTGGTGCGTGCTCTACATCACTGACAGCAGGAGCCCTT GCAAGACCATGGATACTTGTAGGCTCCGAGTCTGATGATACTATTGGTAA ATGACAAC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig11:884239..894796+

>mRNA_S-ischiensis_contig11.2069.1 ID=mRNA_S-ischiensis_contig11.2069.1|Name=mRNA_S-ischiensis_contig11.2069.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1860bp|location=Sequence derived from alignment at S-ischiensis_contig11:884239..894796+ (Schizocladia ischiensis KU_0333)
ATGCTGAACGGCGACCCTTCCAGCGTCGAGGACATGTACCAGGTGGCCAT
GGACCATGGGCCGTGTGGGCGGCAAGACCAGGAGCTCTACCGCGAGCGGA
CGATGCTGAACGGCGACCCTTCCAGCGTCGAGGACATGTACCAGGTGGCC
ATGGACCATGGGCCGTGTGGGCGGCAAGACCAGGAGCTCTACCGCGAGCG
GACGGACTACCACTGGCTGGGCATTGGCATCCAGAAGGGGGGGACCACCA
CTCTCTTCCAGCGCCTGTACGGCCACCCTGCGTCCTTCATGGGGGCCAAG
GAGGACTACCACTGGCTGGGCATTGGCATCCAGAAGGGGGGGACCACCAC
TCTCTTCCAGCGCCTGTACGGCCACCCTGCGTCCTTCATGGGGGCCAAGG
AGATGGGGTTCTTCCTCAAGGTGAAACTGGATGAGATGGAACCCGTGGAC
GCCAAGAAATGGTTTGCAGACCTGCACTGGTGGAACACCTACACCGTTGA
CAAGATGGGGTTCTTCCTCAAGGTGAAACTGGATGAGATGGAACCCGTGG
ACGCCAAGAAATGGTTTGCAGACCTGCACTGGTGGAACACCTACACCGTT
GACAAGGGCATGCGGCGGGGGGAGATCACCCCCAACTACCAGACCCAGCC
AAGGGTGCCTCGGCGCGTCAAGAAGATCCTGGGTGACCCCATGCGCTTTG
TCGTGCTGCTCAGGGACCCCGTGTCTAGGGCGTACAGGGCATGCGGCGGG
GGGAGATCACCCCCAACTACCAGACCCAGCCAAGGGTGCCTCGGCGCGTC
AAGAAGATCCTGGGTGACCCCATGCGCTTTGTCGTGCTGCTCAGGGACCC
CGTGTCTAGGGCGTACAGCTTCTACCAGATGCGCAAGCGGCTGGGCATCA
AGGAGCAGCTCAAGGGGACCTTTGAGCTCAGCATCATGAGAGAGTACGAC
ACCATCGTCCGCTGCCAGCGCCTGTACCGCGGAATGGAGGACCCCCTGGC
CTGGTACACGGACTGCTACCATCAAGTCTTCTACCAGATGCGCAAGCGGC
TGGGCATCAAGGAGCAGCTCAAGGGGACCTTTGAGCTCAGCATCATGAGA
GAGTACGACACCATCGTCCGCTGCCAGCGCCTGTACCGCGGAATGGAGGA
CCCCCTGGCCTGGTACACGGACTGCTACCATCAAGTATTCCCGCACGTGG
GCTGCCTGGGCCACGGGCTGTACTACACGCACCTGCTCCTGTGGTACCGC
TACTACCCCCCCTGCTCCGTGCTGGTTCTGGACCAGGCCGACCTCAACCG
GCCGGGCACCGACCAGTGCATATACAGCCACCTGGACATGCGCCCGTACG
ACTTTGAGCTCACGCAGGGCCGCAACACCTCCTCCGACTGGATCAAGATT
CCCGCACGTGGGCTGCCTGGGCCACGGGCTGTACTACACGCACCTGCTCC
TGTGGTACCGCTACTACCCCCCCTGCTCCGTGCTGGTTCTGGACCAGGCC
GACCTCAACCGGCCGGGCACCGACCAGTGCATATACAGCCACCTGGACAT
GCGCCCGTACGACTTTGAGCTCACGCAGGGCCGCAACACCTCCTCCGACT
GGATCAAGAGGGACGAGTACAACAAGGAGGACCCCATGGACCCCGTGACG
CGTGACCGCTTGCGAGACCTCTTCAAGCCCTTCAACCTCAAGCTGGAGGA
GCTCGTGGGCCGTACGTTCGACTGGGGCTACTGAAGGGACGAGTACAACA
AGGAGGACCCCATGGACCCCGTGACGCGTGACCGCTTGCGAGACCTCTTC
AAGCCCTTCAACCTCAAGCTGGAGGAGCTCGTGGGCCGTACGTTCGACTG
GGGCTACTGA
back to top