prot_S-ischiensis_contig9.20770.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20770.1
Unique Nameprot_S-ischiensis_contig9.20770.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length88
Homology
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: A0A7S4I9Q7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I9Q7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.810e-11
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0
Query:   24 VGEDGNLDMCDVCHKERGRLLCCDSCPRVYHELCLPEGPWRSIIAFQGADEKWHCHRCL 82
            V EDGN   CD+CH +RG +LCCD CP+V+H+ CL  G    I+     ++ W+C++C 
Sbjct:  220 VAEDGNFYRCDICH-DRGNVLCCDGCPKVFHKKCLSPGTASRIV-----EDPWYCNKCF 272          
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: D7FI07_ECTSI (GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI07_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 4.200e-9
Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 0
Query:   24 VGEDGNLDMCDVCHKERGRLLCCDSCPRVYHELCLPEGPWRSIIAF-QGADEKWHCHRC 81
            VGEDGN   C VC  E G + CCD CPRV+HE CLP G    + A  Q   + W+C  C
Sbjct:  305 VGEDGNHFFCSVCG-ESGDITCCDQCPRVFHEECLPIGTDSHLAAHHQTEKDPWYCPSC 362          
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: A0A6H5JJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY6_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 5.770e-9
Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 0
Query:   24 VGEDGNLDMCDVCHKERGRLLCCDSCPRVYHELCLPEGPWRSIIAFQGADEK-WHCHRC 81
            VGEDGN   C  C  E G L CCD CPRV+HE CLP G    + A +  +E  W+C  C
Sbjct:  778 VGEDGNHFFCSACG-ESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSC 835          
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: D7FHY8_ECTSI (Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 5.780e-9
Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 0
Query:   24 VGEDGNLDMCDVCHKERGRLLCCDSCPRVYHELCLPEGPWRSIIAFQGADEK-WHCHRC 81
            VGEDGN   C  C  E G L CCD CPRV+HE CLP G    + A +  +E  W+C  C
Sbjct:  878 VGEDGNHFFCSACG-ESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSC 935          
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: A0A8B7M8U7_DROEL (chromodomain-helicase-DNA-binding protein Mi-2 homolog n=1 Tax=Drosophila elegans TaxID=30023 RepID=A0A8B7M8U7_DROEL)

HSP 1 Score: 57.0 bits (136), Expect = 1.750e-7
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0
Query:   31 DMCDVCHKERGRLLCCDSCPRVYHELCLPEGPWRSIIAFQGADEKWHCHRCLATP 85
            + C VC ++ G+LLCCDSCP VYH  CL   P +S+   +GA   WHC RC A P
Sbjct:   37 EFCQVC-QDGGKLLCCDSCPSVYHRTCL-NPPLQSVP--KGA---WHCPRCTAPP 84          
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: A0A7S1Y314_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y314_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.770e-7
Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 0
Query:   24 VGEDGNLDMCDVCHKERGRLLCCDSCPRVYHELCLPEGPWRSIIAFQGADEKWHCHRC 81
            V EDGN+D C +C K  G LLCCD CPR +H  C+        +  Q A+ +W CH C
Sbjct:  750 VVEDGNVDYCQICMKA-GNLLCCDRCPRAFHNKCMD-------VETQ-AEGEWECHLC 798          
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: A0A6H5L4S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S9_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 8.490e-7
Identity = 29/65 (44.62%), Postives = 34/65 (52.31%), Query Frame = 0
Query:   24 VGEDGNLDMC------DVCHKERGRLLCCDSCPRVYHELCLPEGPWRSIIAF-QGADEKWHCHRC 81
            VGEDGN   C       VC  E G + CCD CPRV+HE CLP G    + A  Q   + W+C  C
Sbjct:  291 VGEDGNHFFCRWARDRSVCG-ESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWYCPSC 354          
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: A0A7S1UAX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAX5_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.810e-6
Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = 0
Query:   26 EDGNLDMCDVCHKERGRLLCCDSCPRVYHELCLPEGPWRSIIAFQGADEKWHCHRC 81
            +DGN + C +C  + G +LCCD CPR +HE C+        +  +   E W CHRC
Sbjct:   60 DDGNNNFCSICLGD-GNILCCDLCPRSWHEHCID-------VDAKALPEVWECHRC 107          
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: A0A0L0HF36_SPIPD (PHD-type domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HF36_SPIPD)

HSP 1 Score: 53.1 bits (126), Expect = 4.010e-6
Identity = 26/55 (47.27%), Postives = 31/55 (56.36%), Query Frame = 0
Query:   29 NLDMCDVCHKERGRLLCCDSCPRVYHELCLPEGPWRSIIAFQGADEKWHCHRCLA 83
            N D C  C   RGRLLCCDSCPR +H  C+ EG + S+      +E W C  C A
Sbjct:  484 NDDHCSAC-LGRGRLLCCDSCPRAFHFHCVEEG-FESVEDVP--EESWECRNCRA 534          
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Match: UPI000719E6C9 (E3 ubiquitin-protein ligase TRIM33-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E6C9)

HSP 1 Score: 52.8 bits (125), Expect = 5.470e-6
Identity = 24/55 (43.64%), Postives = 30/55 (54.55%), Query Frame = 0
Query:   27 DGNLDMCDVCHKERGRLLCCDSCPRVYHELC-------LPEGPWRSIIAFQGADE 74
            D N D C VCH + G L+CCD CPRVYH+ C        P G W+  +  +  DE
Sbjct:  859 DPNEDWCSVCH-DGGDLVCCDYCPRVYHQTCHIPVLTAAPSGDWKCGLCREVTDE 912          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4I9Q7_9STRA3.810e-1144.07Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
D7FI07_ECTSI4.200e-949.15GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JJY6_9PHAE5.770e-949.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHY8_ECTSI5.780e-949.15Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A8B7M8U7_DROEL1.750e-750.91chromodomain-helicase-DNA-binding protein Mi-2 hom... [more]
A0A7S1Y314_9STRA1.770e-744.83Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6H5L4S9_9PHAE8.490e-744.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UAX5_9STRA2.810e-639.29Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A0L0HF36_SPIPD4.010e-647.27PHD-type domain-containing protein n=1 Tax=Spizell... [more]
UPI000719E6C95.470e-643.64E3 ubiquitin-protein ligase TRIM33-like n=1 Tax=Pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 32..82
e-value: 3.7E-7
score: 39.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 22..85
e-value: 1.0E-12
score: 49.6
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 33..81
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..88
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 30..84
score: 9.339
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 27..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3071782..3073593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20770.1mRNA_S-ischiensis_contig9.20770.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 3071782..3073593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20770.1 ID=prot_S-ischiensis_contig9.20770.1|Name=mRNA_S-ischiensis_contig9.20770.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=88bp
MAGASAAAGSAGWGSPASAFGGSVGEDGNLDMCDVCHKERGRLLCCDSCP
RVYHELCLPEGPWRSIIAFQGADEKWHCHRCLATPQQS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD