mRNA_S-ischiensis_contig9.20765.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A7J8MAE8_9ROSI (Uncharacterized protein (Fragment) n=1 Tax=Gossypium lobatum TaxID=34289 RepID=A0A7J8MAE8_9ROSI) HSP 1 Score: 130 bits (326), Expect = 1.350e-31 Identity = 90/285 (31.58%), Postives = 142/285 (49.82%), Query Frame = 2
Query: 149 QEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFG--AGREELAAIAATAGLPDGGDEALATELEGVFAG-GFEGIVPRLFPRCKLVQCITTG 994
QE+QE VL IL N TE L G F+ P+ YE ++ Y+D I G+ S L+ +++ LLS+GT+GG PK+IP T + M+ + + K S EG+++ E+ T GL A+ +T + + K L CTSP + L + +SM+ LL GLL+R EV I +FAS++ ++ LE W++ +++RTG A R +++I T P+ LA ++ + +EGI+ L+P K + CI TG
Sbjct: 26 QEIQEQVLEEILKRNAGTEYLSRFFPNGQADNQSFKTNVPIITYEDIQPYIDRIANGETS-SILLAYRIIQFLLSTGTSGGQPKLIPMTAESFEKRMSDLLLSDLVTRKCFSGSDEGKSLYLYFIKPEIETPSGLKASFFTTFYFKTESFKNGLAKFCTSPIDTILCLDNKQSMFCQLLTGLLQRDEVIRIGSSFASVLARSIKFLEDYWKELCSNIRTGYLSDWIADPACRNAMSSIL-TRPEPE-----LADLIQQICEDKSWEGIIKELWPEVKCISCIVTG 303
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A1U8KM03_GOSHI (indole-3-acetic acid-amido synthetase GH3.17-like n=17 Tax=Gossypium TaxID=3633 RepID=A0A1U8KM03_GOSHI) HSP 1 Score: 129 bits (323), Expect = 1.300e-29 Identity = 94/304 (30.92%), Postives = 147/304 (48.36%), Query Frame = 2
Query: 89 MADTPPAIAFKQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKA-GSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFGAGREELAAIAATAGLPDGGDEALATELEGVFA-GGFEGIVPRLFPRCKLVQCITTG 994
MA K +E +++QE +LG IL+ N TE L + G T F++ P+ Y+ ++ Y+D I G L+ + ++G LSSGT+GG PK+IP T + + V A ++M K G G+ + L A +V T GL A+A++T + + +L TSPYE + +S Y LL GL++R EV I FA+ V G++ +E WR+ ++++TG AA P LA LE + + +EGIV +L+PR K + + TG
Sbjct: 1 MATNDYESVLKMLEEITTNARQIQEQLLGEILSKNAETE-YLQGFLQGQTDKQLFKKNVPIVTYDHIKPYIDRIANGKASSDILLVEPLIGFSLSSGTSGGQPKLIPITAESANVTAALGNLHLSLMVKHFGDLSQVGKRMELLFAKPDVETPSGLKASAVTTRAFKESSFQAILPKLYTSPYETIFCPDTKQSTYCQLLFGLIQRDEVVVIGSIFAATVLRGIKFIENNWRELCSNIKTGKISDWITDSGCRKAASLILKPNPK-----LADLLEDICSCKSWEGIVRKLWPRTKYIGTVCTG 298
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A1Y1IJM7_KLENI (Auxin-responsive GH3 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJM7_KLENI) HSP 1 Score: 129 bits (323), Expect = 1.630e-29 Identity = 107/309 (34.63%), Postives = 152/309 (49.19%), Query Frame = 2
Query: 101 PPAIAFKQFQEDL--GCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAG---DKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAK---AGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIK--PMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFGAGREELAAIAATAGLPDGGD-EALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
PPA + + D G QEVQ VL AILA NE TE L S G+ S+SV F+ P+T Y + +V+ + +P L G+K+ LL+SG+T K+IP T T + A+I + A SN R +N R P GL A L L K + + +SP E F + + ++ Y H+LC L ++ ++R +FA+ TLE WR V VR+G + G EE+ A AT D D ++LA ELE F GF+GI+PR++P+ K V+CI TG
Sbjct: 36 PPAYSIDDLERDAKEGV-QEVQRRVLTAILALNENTEYLRSYGLDRSSSVERFKAAHPLTTYGHFKPWVEREASNFHTGSEPKILCGEKIAHFLLTSGSTDSR-KLIPETEGSLTRATRLIVLAASIFTRFFGAESNAYALRLVNMTR---PQPLPGGLQAMHLVPALTRFGLDKFPDAVSRTMSSPAEVFTLFDAEQAAYCHMLCALAGAKKLTQMRTSFAASFVAAFHTLERDWRGLVEDVRSGGVNAAR-VGSEEVRAAIATRMARDCEDLKSLADELEAEFQKGFDGIIPRVWPKVKFVECILTG 338
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A6J1ITV1_CUCMA (jasmonic acid-amido synthetase JAR1-like n=5 Tax=Cucurbita TaxID=3660 RepID=A0A6J1ITV1_CUCMA) HSP 1 Score: 127 bits (319), Expect = 4.190e-29 Identity = 94/303 (31.02%), Postives = 138/303 (45.54%), Query Frame = 2
Query: 119 KQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPM-EGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPML---EASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAP-----PSFGAGREELAAIAATAGLPDGGDEALATELEGVFAG--GFEGIVPRLFPRCKLVQCITTG 994
++F+E + VQ L IL N E L + G+ G T F+ P+ ++ Y+ I GD P L G + M LSSGTT G PK IP+ M F+T A + P+ G+A+ F+ + K+ TK GL A +T++ SP K M+ ++ C SP E + +S+Y HLLCGL+ R EV + +FA + RT E W + +++R G PS A +L D LA + AG + G++P LFP K + I TG
Sbjct: 15 EEFEELTRDAERVQVETLKKILEENGWAEYLQNLGLNGRTDPQSFKECVPLATHDDFEAYIQRIADGDSSP-VLTGKPIKSMSLSSGTTKGRPKFIPFNDSLVETTMQTFLTSFAFRNR--QVPIGNGKALQFIYSSKQFKTKGGLAAGTATTNVFRSPKFKSMMKSIQSQCCSPDEVIFGSDVHQSLYCHLLCGLIYRDEVELVYSSFAHSIILAFRTFEQVWEELCSNIRDGVLSSWVIDPSIRAAMSKLLKP----------DPELADLIYKKCAGLSNWSGLIPELFPNAKYIHGIMTG 304
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A6D2K5T7_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2K5T7_9BRAS) HSP 1 Score: 127 bits (318), Expect = 5.380e-29 Identity = 97/299 (32.44%), Postives = 151/299 (50.50%), Query Frame = 2
Query: 107 AIAFKQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALV-GDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFG--AGREELAAIAATAGLPDGGDEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
A K+ +E +++Q+ +L IL N TE L R + GS+ F++ PV+ YE V+ Y++ + G+ PS ++ G+ + LLS+GT+GG PK+ P K +AI++K EG+ I FL T GL A +T +S K TSP E L + +SMY HLLCGL++R EV + +FAS + + + LET W++ A++R+G + RE ++AI L D A E E + +EGI+ RL+P K ++ I+TG
Sbjct: 5 ASKLKELEELTSNAKKIQDDMLEEILKANANTE-YLRRFLHGSSDKKLFQKNVPVSSYEDVKPYIERVANGE--PSYIISGEPITNFLLSTGTSGGKPKIYPTNNKYFEDFAFFLALSSAIISKYVDGVQEGKMIMFLNTIMLSTTPSGLDLAPATTSYAMSDYFKKQPSKCYTSPDEVILCVDSKQSMYCHLLCGLVQREEVVSMASSFASTLVQAISFLETHWKELCANIRSGHVSEWITDLSCRESVSAILGGPNL----DLANLIERECI-QKSWEGIITRLWPNIKYIRSISTG 295
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: UPI0010A4C164 (jasmonoyl--L-amino acid synthetase JAR6-like n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4C164) HSP 1 Score: 127 bits (318), Expect = 5.380e-29 Identity = 90/291 (30.93%), Postives = 135/291 (46.39%), Query Frame = 2
Query: 149 QEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPME-GRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEA---SCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGD-----APPSFGAGREELAAIAATAGLPDGGDEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
+ VQ L IL N + E L + G+ G T F+ P+ ++ + Y+ I G+ S L G + M LSSGTT G PK +PW + + + T A K P++ G+ +NF+ + K+ TK GL+A +T+L P K ++A C+SPYE + +S+Y HLLCGL+ R E++ + FA + R E W + +R G PS A E+L L +EA + V + G++P LFP K V I TG
Sbjct: 25 ESVQRETLRRILEDNASAEYLQNLGLHGRTDPDGFKACVPLVTHKDLEPYIQRIIDGEAS-SFLTGKPITTMSLSSGTTQGKPKFVPWNDELFDTTLQIYQTSFAFRNK--EFPIQNGKVLNFIYSSKQFITKGGLIAGTATTNLFRDPRYKSSMKAIQSQCSSPYEVIFGSDFHQSLYCHLLCGLIFREEIQWVGSTFAHSIVHAFRVFEQAWEELCTDIREGVLTNRVTDPSIRAVMEKL--------LKPDPEEADLIYKKCVGLSNWYGLIPELFPNAKYVYGIMTG 304
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A1U8I3J4_GOSHI (indole-3-acetic acid-amido synthetase GH3.17-like n=26 Tax=Gossypium TaxID=3633 RepID=A0A1U8I3J4_GOSHI) HSP 1 Score: 127 bits (318), Expect = 5.910e-29 Identity = 88/286 (30.77%), Postives = 141/286 (49.30%), Query Frame = 2
Query: 149 QEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTG---DAPPSFGAGREELAAIAATAGLPDGGDEALATELEGVFAG-GFEGIVPRLFPRCKLVQCITTG 994
QE+QE VL IL N TE L G F+ P+ YE ++ Y+D I G+ S L+ +++ LLS+GT+GG PK+IP T + M+ + + K S EG+++ E+ T GL A+ +T + + K L CTSP + L + +SM+ LL GLL+R EV FAS++ ++ LE WR+ +++RTG D G + +++ I + LA ++ + +EGI+ +L+P+ K + CI TG
Sbjct: 26 QEIQEQVLEEILKRNAGTEYLSRFFPNGQADNQSFKTNVPIITYEDIKPYIDRIANGETS-SILLAYRIIQFLLSTGTSGGQPKLIPMTAESFEKRMSDLLLSDLVTRKCFSGSDEGKSLYLYFIKPEMETPSGLKASFFTTFYFKTESFKNGLAKFCTSPIDTILCLDNKQSMFCQLLTGLLQRDEVVRFGSTFASVLARTIKFLEDYWRELCSNIRTGYLSDWIIDPGC-KNDMSLILTRP------NRELADSIQQICEDKSWEGIIVKLWPKIKYIHCIITG 303
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A1B6PS82_SORBI (Uncharacterized protein n=8 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PS82_SORBI) HSP 1 Score: 127 bits (319), Expect = 6.440e-29 Identity = 100/291 (34.36%), Postives = 139/291 (47.77%), Query Frame = 2
Query: 155 VQEAVLGAILAHNEATEPL---LSRGITGSTS---VVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLL-SSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCT---SPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFGAGREELAAIAATAGLPDGG-DEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
+Q+ VL ILA N T+ L L G G + F+ PV +YE V+ Y++ I G PS+L+ K + LL SSGT+GG PK++P T ++ + +M K +GR + L E+ T GLVA + T S + ++ T SP EA L + +SMYA LLCGL RRGEV + FAS ++ LE WR +R G S A+A PD +A+A E EG + + GIV RL+PR K + I TG
Sbjct: 81 IQQRVLREILAMNAGTDYLRGFLGAGAEGRDADELAATFKDRVPVVEYEDVKPYIERIANGA--PSSLISSKTITELLTSSGTSGGQPKLMPSTEEELDRKTFLYNLLVPVMNKYVEGLDKGRCMYLLFVKPEITTASGLVARPVLTSYYKSRHFRERPDSPYTRYTSPNEAILCPDSAQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEAHWRALCDDIRAGRVDASRVTDAACRDAVARVVARPDPALADAIAAECEGSSSSSWRGIVRRLWPRTKYIDVIVTG 369
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A0U9HTE9_KLENI (Indole-3-acetic acid-amido synthetase-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HTE9_KLENI) HSP 1 Score: 126 bits (316), Expect = 1.620e-28 Identity = 98/307 (31.92%), Postives = 146/307 (47.56%), Query Frame = 2
Query: 101 PPAIAFKQFQEDL--GCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSA---LVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMA-GFMTQAAIMAKAGSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLI---LSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTGDAPPSFGAGREELAAIAATAGLPDGGDEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
P + ++D GC +++Q+ VL IL +E TE L + +++ DF+ L PV DY RE+V+ +G+ + ++ L +K+ LLSSGTT G K+IP TV T + G +T+ I G+ + ++ + GL A + T LI L + +L C SP E + + Y H+LC L RG++ +R FA + L LE W F+ +RTG R A + G + LA LE F GFEGIVPR++PR K V+CI TG
Sbjct: 11 PAVYGINELEQDAAAGC-EQIQQQVLRGILLLHEKTEYLQRYNLGPTSTAEDFKALHPVCDYPHFREWVEREASGEAERTSNQILCAEKIFQFLLSSGTTSGR-KLIPETVGSMTRSVRFGQLTKTLIQRHFGAESTD-HSLRLVNCSAPQILPGGLPAIPIVTGLINLALKYDLPRVLREDC-SPPEVYTHTLHDEASYCHVLCALAARGKLTALRTTFAVTLVTALTDLELNWAQFMHDIRTGTVSEE----RISSAVVRDAVARRIGANPGLADALEAEFREGFEGIVPRIWPRVKFVECIFTG 309
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Match: A0A0D2QYB2_GOSRA (Uncharacterized protein (Fragment) n=7 Tax=Gossypium TaxID=3633 RepID=A0A0D2QYB2_GOSRA) HSP 1 Score: 126 bits (317), Expect = 1.640e-28 Identity = 90/307 (29.32%), Postives = 149/307 (48.53%), Query Frame = 2
Query: 86 IMADTPPAIAFKQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGSTSVVDFRRLQPVTDYEAVREYVDAITAGDKDPSALVGDKVLGMLLSSGTTGGPPKMIPWTVKQSTVGMAGFMTQAAIMAKA-GSNPMEGRAINFLRAGKEVPTKCGLVAAALSTHLILSPTIKPMLEASCTSPYEAFLIRNPGRSMYAHLLCGLLRRGEVREIRGNFASIVYEGLRTLETQWRDFVAHVRTG---DAPPSFGAGREELAAIAATAGLPDGGDEALATELEGVFAGGFEGIVPRLFPRCKLVQCITTG 994
+MA K +E +++QE +LG IL+ N TE L + G T F++ P+ Y+ ++ Y+D I G L+ + ++G LSSGT+GG PK+IP T + + V A ++M K G G+ + L A +V T GL A+A++T + + +L TSPYE + +S Y LL GL++R EV I FA+ V G++ +E WR+ ++++TG D G + + L D ++ + + +EGIV +L+P+ K + + TG
Sbjct: 33 LMATNDYESVLKMLEEITTNARQIQEQLLGEILSKNAETE-YLQGFLHGQTDKQLFKKNVPIVTYDHIKPYIDRIANGKASSDILLVEPLIGFSLSSGTSGGQPKLIPITAESANVTAALGNLHLSLMIKHFGDLSQVGKRMELLFAKPDVETPSGLKASAVTTRAFKESSFQAILPKLYTSPYETIFCPDTKQSTYCQLLFGLIQRDEVVVIGSIFAATVLRGIKFIENNWRELCSNIKTGKISDWITDSGCRKAASLILKPNPKLADLLEDTCSCK-------SWEGIVRKLWPKTKYIGTVCTG 331 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20765.1 >prot_S-ischiensis_contig9.20765.1 ID=prot_S-ischiensis_contig9.20765.1|Name=mRNA_S-ischiensis_contig9.20765.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=302bp MADTPPAIAFKQFQEDLGCPQEVQEAVLGAILAHNEATEPLLSRGITGSTback to top mRNA from alignment at S-ischiensis_contig9:3046493..3050760+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20765.1 ID=mRNA_S-ischiensis_contig9.20765.1|Name=mRNA_S-ischiensis_contig9.20765.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4268bp|location=Sequence derived from alignment at S-ischiensis_contig9:3046493..3050760+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:3046493..3050760+ >mRNA_S-ischiensis_contig9.20765.1 ID=mRNA_S-ischiensis_contig9.20765.1|Name=mRNA_S-ischiensis_contig9.20765.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1812bp|location=Sequence derived from alignment at S-ischiensis_contig9:3046493..3050760+ (Schizocladia ischiensis KU_0333)back to top |