prot_S-ischiensis_contig9.20742.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20742.1
Unique Nameprot_S-ischiensis_contig9.20742.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length208
Homology
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BLAST of mRNA_S-ischiensis_contig9.20742.1 vs. uniprot
Match: D8LSM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM7_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 8.840e-20
Identity = 62/173 (35.84%), Postives = 91/173 (52.60%), Query Frame = 0 
Query:    1 MLVGRRVAQVCMKMDIATGGAILLHMYPQVIKNLRSAPSFRA-----------------KLLPAARFGVLVSVLVQVGMLRNEQLQDDIRIFKDLKVGGVELGWVEAFLDSVLFVKMAALPFPWWVALLGPVAAMLNPASPGAQEVLKSESPAKALGMKVLNFAIGRKPGADD 156
            +L+GRR+AQ C K+++     + L + P V++    A    A                 + LP  +  VLV   V++ +++N QL+DD+RI   LK+ G +  W+E  +DSV+F  M   P  WW  LL  VA  L P     ++V+ S+   K LGM +LN AIGR PGADD
Sbjct:  452 LLLGRRLAQACFKLEMVMPFGVALRVLPAVLQTSLGAGGGVADGEGAEGAAAGAGGQLGRALPLVKVLVLVMAYVKLLVVKNGQLEDDVRILSGLKIRGYDCEWIERGVDSVVFGMMVGCP--WWAGLLA-VAFSLLPNHEVTKKVMASDDKLKTLGMTLLNKAIGRTPGADD 621
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSM7_ECTSI8.840e-2035.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2901322..2906761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20742.1mRNA_S-ischiensis_contig9.20742.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2901305..2906815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20742.1 ID=prot_S-ischiensis_contig9.20742.1|Name=mRNA_S-ischiensis_contig9.20742.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=208bp
MLVGRRVAQVCMKMDIATGGAILLHMYPQVIKNLRSAPSFRAKLLPAARF
GVLVSVLVQVGMLRNEQLQDDIRIFKDLKVGGVELGWVEAFLDSVLFVKM
AALPFPWWVALLGPVAAMLNPASPGAQEVLKSESPAKALGMKVLNFAIGR
KPGADDDDDDDDDDDDNGSDGNGAGSDEEEEGGEGAGPRKLKRAAKVAAV
VAGLTDG*
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